Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0008808

Physical Location & Seq

Genomic Coordinates Reverse (-)

12588174 .. 12599692

Gene Structure 11519 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1157400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2658 bp

ATGGGCGCGCCAGATAAAGCGCCGGTCAATTCCAATTCGATGCAGCGTGTAAAGGTTTACCGTCTGAGTGAGGAAGGAAAATGGGATGATCAGGGAACTGGTCATGTCACAGTTGACTACATGGAGCGTTCAGAAGAGCTGGGTTTGTTTGTTATTGATGAAGAAGACAATGAGACATTACTTCTGCATCGAATCAGCTCGGATGACATTTACAGAAAGCAAGAAGATACAATTATCTCGTGGAGGGATCCAGAATATTCTACTGAATTAGCTCTCAGCTTTCAGGAGCCAACAGGCTGCTCTTACATATGGGACCACATATGCAGCGTGCAAAGGAATATACATTTTAATTCTCTTAACAATGAGACATTTCACAATGCAAACAGTGAGTTGAGGGAGCTCCCTACGGTTGAGCTATCCACGCTTCCTTTAATCCTTAAGACTGTTGCTGAGAGTGGCATTGCTGACCAGATGCGATTGACAGAATTGATATTGAATGATCAAGAGTTTTTTCGGAAGCTCATGGGCCTATTTAGAATCTGTGAAGACTTGGAAAATGTTGACAGTCTTCACATGATATACAAAATAGTAAGGGGGATCATTCTCCTGAATAGTCCTCAGATATTTGAGAAAATATTCGGTGATGATTTAATCATGGATATCATCGGTTCCCTTGAGTATGACCCTGAAGTACCTAATGTCCAACACCATCGTAACTTTTTGAAAGAACATGTTGTTTTTAAGGAGGCCATACCGATTAAAGATGCTATGGTGTTGTCAAAGATACACCAGACGTATAAAGTTGGATATTTAAAGGACGTTGTTTTGGCTAGAGTATTGGATGAGGCCACGGTTGCAAATCTGAATTCCATTATTCATGCAAACAACGCTATTGTTGTTTCTTTGCTAAAGGATGACAGTACCTTTATTCAAGAATTGTTTGCTAGGCTACGGTTGCCATCCACCTCCGCAGAATCTAAAAAGAACTTGGTATATTTCTTGCACGAGTTTTGTAGTTTAAGCAAAAGCCTGCAGATGGTCCAGCAGCTTCGGCTATTTAGGGATCTCATGAATGAAGGAATCTTTGACATTGTAACTGATGCGTTGCAGAGTCAAGACAAAAAGCTTATATTAACTGGGACAGATATCCTCAATCTTTTCATGAATCAGGATCCAAACCTTCTGCGTTCATATGTTGTTCGTCTGGAAGGAACTCCACTTTTAGGACTCTTGGTTAAAGGAATGATTACAGATTTCGGAGAGGACATGCATTGCCAGTTTCTTGAAATTCTTCGTAGTCTACTAGATTCTTACACATTGTCAGGAGCTCAGAGAGATGCAATTATCGAGATATTCTATGAGAAGCATCTGGGGCAGTTGATTGATGTTATAACAGCGTCATGTCCTTTGGAAGGCAATGGTCAATCAACTGATAGATCTTCCATCTCTGGTGGAAGGGTTGAAAGTCAGAGTGTCGCGAAGCCTGAAATATTATCAAATATATGCGAATTGCTATGCTTTTGTGTACTTCACCATCCATTCAGAATAAAGTGCAACTTTCTGCTTAATAATGTGATGGATAAAGTTTTGTTGGTTACAAAAAGAAGGGAAAAGTATCTGGTTGTTGCTGCAGTTCGATTTGTTCGCACTATTCTTTCACGTCATGATGAGCATCTGGTAAATCATATTGTTAAGAACAACCTTCTCAAGCCAATTGTCGATGCATTTGTTTATAATGGAAATCGATATAACCTGCTGAACTCGGCTGTTTTAGAACTTTTTGAGTTCATCCGCAAGGAAAACTTGAAGTCTTTGGTTAAATACTTGGTTGATTCATTCTGGGATCAGTTGGTCAGATTTGAGAATTTTGCATCTGTTCACTCCCTCAAAGTAAAATATGAGCAGTGCCTAGAACATTTTGGAACCAAAGGCACCGCTAATGTGTCAGACCCTAGAAAACGAAATGATGAGCGAGCTTTGGAGAAAGAAGAAGAAGAATATTTCAATGAGGACAGTGATGAAGAAGATACAGCATCTGCATCAATGCCAAATACCCAAAAAGTACAGGCTCAACCTCAACCTGTTTTATCCAATGGAGTTGCTGCAAGTTATCCACCATCCAGTCCAAGGTCTGTCGGGCTGGTAGATTATGATGATGATGAGGACGACGAAGACTACAAGCCACCGCCCAGGAAACATCCTGAACCTTCTGATGAAGATGAAGGAACAATGGAGTCCCTTAGGTTGAAGCGGAAATTGGCTTCTAAGGATAGGGAGACTGAGCTAGCAAAGAGGCAACGGTTGGGTAAAAACTCCAAGCCAAAAGAAAGTGTGTTTGCTGCTTTGTGTACAACTCTAAGCCAGGCAGTGCTACCTAATAAGAAAATTGCAAGCAGCATCAATACAACTCGCACGGCTGACGGAGTCAACAACTCACGCGAAGGGAAAAATCAAGAGAATGATGAGCGTGCTGTTTCTAAAAACTGTTCTGATAACAGCAATTCAGATGATGCAGATAATAGGGAAAATGAGCCTACTACTTCTAGAGGCTGCTCGGATCACTTGCATGGCACTTCGGAGAATAGACAGTTGGGTGGAGAGGACTGCGCGTTGATACCACCAAAATCTTCACCGGAAATGGCGGTAAATGGGTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04212 ko04922 map04212 map04922

Pfam Domains

Protein Families

SMK-1

Protein Analysis

886

Amino Acids

100.38

Weight (kDa)

5.17

Isoelectric Point (pI)

37.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EVH1_PP4R3	PF22972	15 - 114	1.6e-16	EVH1-like domain in PP4R3 protein
PP4R3	PF04802	152 - 635	2.3e-154	Phosphatase 4 regulatory subunit 3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06670 AT3G06670
fragaria_vesca	FvH4_4g19450 FvH4_4g19450 FvH4_4g19450 FvH4_4g19450
malus_domestica	MD13G1156500.v1.1 MD16G1157400.v1.1
prunus_persica	Prupe.1G122300_v2.0.a1 Prupe.1G122300_v2.0.a1
pyrus_communis	pycom13g13390 pycom16g13230
rosa_chinensis	RchiOBHm_Chr4g0424501
rosa_laevigata	RLG00000007468
rosa_multiflora	Rmu_sc0002603.1_g000008 Rmu_sc0003942.1_g000025
rosa_roxburghii	Rroxscaffold_5G00366430
rosa_rugosa	Rorug04G0198000
rosa_samantha	Rh4AG254400 Rh4BG259800 Rh4CG270900 Rh4DG254200
rosa_wichuraiana	Rw4G021970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1391, 1734
Acc36I	ACCTGC	1 cut(s)	1761
AccB1I	GGYRCC	1 cut(s)	1931
AccI	GTMKAC	1 cut(s)	1300
AccII	CGCG	4 cut(s)	8, 1478, 2439, 2609
AciI	CCGC	6 cut(s)	969, 1792, 1935, 2186, 2251, 2642
AclWI	GGATC	8 cut(s)	242, 255, 605, 1071, 1166, 1179, 1851, 2565
AcsI	RAATTY	3 cut(s)	865, 1287, 1864
AcuI	CTGAAG	1 cut(s)	708
AfaI	GTAC	5 cut(s)	693, 922, 1527, 2064, 2350
AfiI	CCNNNNNNNGG	4 cut(s)	1036, 1223, 1412, 2127
AflII	CTTAAG	1 cut(s)	437
AflIII	ACRYGT	1 cut(s)	730
AgsI	TTSAA	8 cut(s)	496, 724, 932, 1286, 1463, 1807, 2005, 2248
AjiI	CACGTC	1 cut(s)	1661
AjnI	CCWGG	2 cut(s)	2189, 2361
AjuI	GAANNNNNNNTTGG	4 cut(s)	2240, 2272, 2573, 2605
Alw21I	GWGCWC	2 cut(s)	402, 1330
Alw26I	GTCTC	3 cut(s)	167, 359, 2270
AlwI	GGATC	8 cut(s)	242, 255, 605, 1071, 1166, 1179, 1851, 2565
AlwNI	CAGNNNCTG	1 cut(s)	2036
AoxI	GGCC	3 cut(s)	526, 747, 846
ApeKI	GCWGC	9 cut(s)	43, 297, 324, 1045, 1628, 2102, 2339, 2394, 2550
ApoI	RAATTY	3 cut(s)	865, 1287, 1864
AscI	GGCGCGCC	1 cut(s)	6
Asp700I	GAANNNNTTC	2 cut(s)	635, 1290
AspLEI	GCGC	4 cut(s)	8, 10, 22, 2609
AspS9I	GGNCC	3 cut(s)	313, 526, 1039
AsuHPI	GGTGA	3 cut(s)	653, 1523, 2622
AsuNHI	GCTAGC	1 cut(s)	2284
AvaII	GGWCC	2 cut(s)	313, 1039
AxyI	CCTNAGG	1 cut(s)	2240
BamHI	GGATCC	2 cut(s)	247, 1171
BanI	GGYRCC	1 cut(s)	1931
BanII	GRGCYC	2 cut(s)	402, 1330
BauI	CACGAG	2 cut(s)	238, 1004
BbsI	GAAGAC	4 cut(s)	171, 552, 560, 2178
Bbv12I	GWGCWC	2 cut(s)	402, 1330
BbvI	GCAGC	9 cut(s)	55, 284, 336, 1057, 1615, 2089, 2326, 2406, 2537
BccI	CCATC	7 cut(s)	717, 967, 1030, 1451, 1542, 1570, 2125
BceAI	ACGGC	1 cut(s)	2430
BciT130I	CCWGG	2 cut(s)	2191, 2363
BclI	TGATCA	2 cut(s)	88, 499
BcoDI	GTCTC	3 cut(s)	167, 359, 2270
BfaI	CTAG	7 cut(s)	831, 945, 1304, 1910, 1953, 2285, 2544
BfmI	CTRYAG	2 cut(s)	1031, 1629
BfoI	RGCGCY	1 cut(s)	23
BfrI	CTTAAG	1 cut(s)	437
BfuAI	ACCTGC	1 cut(s)	1761
BglII	AGATCT	1 cut(s)	1436
BisI	GCNGC	9 cut(s)	44, 298, 325, 1046, 1629, 2103, 2340, 2395, 2551
BlsI	GCNGC	9 cut(s)	45, 299, 326, 1047, 1630, 2104, 2341, 2396, 2552
Bme1390I	CCNGG	2 cut(s)	2191, 2363
Bme18I	GGWCC	2 cut(s)	313, 1039
BmgBI	CACGTC	1 cut(s)	1661
BmgT120I	GGNCC	3 cut(s)	313, 526, 1039
BmiI	GGNNCC	7 cut(s)	249, 288, 314, 670, 1173, 1924, 1933
BmrFI	CCNGG	2 cut(s)	2191, 2363
BmrI	ACTGGG	1 cut(s)	1146
BmtI	GCTAGC	1 cut(s)	2288
BmuI	ACTGGG	1 cut(s)	1146
BpiI	GAAGAC	4 cut(s)	171, 552, 560, 2178
BpuEI	CTTGAG	2 cut(s)	695, 1691
Bsa29I	ATCGAT	1 cut(s)	1744
BsaBI	GATNNNNATC	1 cut(s)	1671
BsaJI	CCNNGG	3 cut(s)	849, 2126, 2189
BsaWI	WCCGGW	1 cut(s)	2632
Bsc4I	CCNNNNNNNGG	4 cut(s)	1036, 1223, 1412, 2127
Bse118I	RCCGGY	1 cut(s)	22
Bse1I	ACTGG	4 cut(s)	103, 1141, 1276, 2121
Bse21I	CCTNAGG	1 cut(s)	2240
Bse3DI	GCAATG	3 cut(s)	459, 1270, 1423
Bse8I	GATNNNNATC	1 cut(s)	1671
BseBI	CCWGG	2 cut(s)	2191, 2363
BseCI	ATCGAT	1 cut(s)	1744
BseDI	CCNNGG	3 cut(s)	849, 2126, 2189
BseGI	GGATG	9 cut(s)	91, 208, 847, 919, 959, 1534, 1788, 2117, 2197
BseJI	GATNNNNATC	1 cut(s)	1671
BseLI	CCNNNNNNNGG	4 cut(s)	1036, 1223, 1412, 2127
BseMI	GCAATG	3 cut(s)	459, 1270, 1423
BseMII	CTCAG	6 cut(s)	56, 289, 441, 632, 1343, 2271
BseNI	ACTGG	4 cut(s)	103, 1141, 1276, 2121
BsePI	GCGCGC	1 cut(s)	6
BseXI	GCAGC	9 cut(s)	55, 284, 336, 1057, 1615, 2089, 2326, 2406, 2537
BseYI	CCCAGC	1 cut(s)	139
Bsh1236I	CGCG	4 cut(s)	8, 1478, 2439, 2609
BshFI	GGCC	3 cut(s)	528, 749, 848
BshNI	GGYRCC	1 cut(s)	1931
BshVI	ATCGAT	1 cut(s)	1744
BsiHKAI	GWGCWC	2 cut(s)	402, 1330
BsiSI	CCGG	2 cut(s)	23, 2633
BslFI	GGGAC	3 cut(s)	326, 1153, 2221
BslI	CCNNNNNNNGG	4 cut(s)	1036, 1223, 1412, 2127
BsmAI	GTCTC	3 cut(s)	167, 359, 2270
BsmFI	GGGAC	3 cut(s)	326, 1153, 2221
BsnI	GGCC	3 cut(s)	528, 749, 848
Bsp1286I	GDGCHC	2 cut(s)	402, 1330
Bsp1407I	TGTACA	1 cut(s)	2348
Bsp143I	GATC	9 cut(s)	88, 247, 499, 597, 1063, 1171, 1436, 1843, 2557
Bsp68I	TCGCGA	1 cut(s)	1478
BspACI	CCGC	6 cut(s)	969, 1792, 1935, 2186, 2251, 2642
BspANI	GGCC	3 cut(s)	528, 749, 848
BspCNI	CTCAG	6 cut(s)	57, 288, 442, 631, 1342, 2272
BspDI	ATCGAT	1 cut(s)	1744
BspFNI	CGCG	4 cut(s)	8, 1478, 2439, 2609
BspHI	TCATGA	3 cut(s)	1068, 1161, 1663
BspLI	GGNNCC	7 cut(s)	249, 288, 314, 670, 1173, 1924, 1933
BspMAI	CTGCAG	2 cut(s)	1035, 1633
BspMI	ACCTGC	1 cut(s)	1761
BspOI	GCTAGC	1 cut(s)	2288
BspPI	GGATC	8 cut(s)	242, 255, 605, 1071, 1166, 1179, 1851, 2565
BspQI	GCTCTTC	1 cut(s)	129
BspT107I	GGYRCC	1 cut(s)	1931
BspTI	CTTAAG	1 cut(s)	437
BsrDI	GCAATG	3 cut(s)	459, 1270, 1423
BsrFI	RCCGGY	1 cut(s)	22
BsrGI	TGTACA	1 cut(s)	2348
BsrI	ACTGG	4 cut(s)	103, 1141, 1276, 2121
BssAI	RCCGGY	1 cut(s)	22
BssECI	CCNNGG	3 cut(s)	849, 2126, 2189
BssHII	GCGCGC	1 cut(s)	6
BssMI	GATC	9 cut(s)	88, 247, 499, 597, 1063, 1171, 1436, 1843, 2557
BssSI	CACGAG	2 cut(s)	238, 1004
BssT1I	CCWWGG	1 cut(s)	2126
Bst2BI	CACGAG	2 cut(s)	238, 1004
Bst2UI	CCWGG	2 cut(s)	2191, 2363
Bst6I	CTCTTC	1 cut(s)	129
BstAFI	CTTAAG	1 cut(s)	437
BstAUI	TGTACA	1 cut(s)	2348
BstC8I	GCNNGC	7 cut(s)	8, 329, 1031, 1974, 2286, 2392, 2469
BstDEI	CTNAG	9 cut(s)	65, 275, 450, 618, 1329, 2240, 2265, 2280, 2357
BstDSI	CCRYGG	1 cut(s)	849
BstENI	CCTNNNNNAGG	1 cut(s)	1410
BstF5I	GGATG	9 cut(s)	91, 208, 847, 919, 959, 1534, 1788, 2117, 2197
BstFNI	CGCG	4 cut(s)	8, 1478, 2439, 2609
BstH2I	RGCGCY	1 cut(s)	23
BstHHI	GCGC	4 cut(s)	8, 10, 22, 2609
BstKTI	GATC	9 cut(s)	91, 250, 502, 600, 1066, 1174, 1439, 1846, 2560
BstMAI	GTCTC	3 cut(s)	167, 359, 2270
BstMBI	GATC	9 cut(s)	88, 247, 499, 597, 1063, 1171, 1436, 1843, 2557
BstMWI	GCNNNNNNNGC	6 cut(s)	421, 854, 887, 955, 1051, 1372
BstNI	CCWGG	2 cut(s)	2191, 2363
BstNSI	RCATGY	2 cut(s)	734, 1270
BstSCI	CCNGG	2 cut(s)	2189, 2361
BstSFI	CTRYAG	2 cut(s)	1031, 1629
BstUI	CGCG	4 cut(s)	8, 1478, 2439, 2609
BstV1I	GCAGC	9 cut(s)	55, 284, 336, 1057, 1615, 2089, 2326, 2406, 2537
BstV2I	GAAGAC	4 cut(s)	171, 552, 560, 2178
BstX2I	RGATCY	4 cut(s)	247, 1063, 1171, 1436
BstYI	RGATCY	4 cut(s)	247, 1063, 1171, 1436
Bsu15I	ATCGAT	1 cut(s)	1744
Bsu36I	CCTNAGG	1 cut(s)	2240
BsuRI	GGCC	3 cut(s)	528, 749, 848
BsuTUI	ATCGAT	1 cut(s)	1744
BtgI	CCRYGG	1 cut(s)	849
BtrI	CACGTC	1 cut(s)	1661
BtsCI	GGATG	9 cut(s)	91, 208, 847, 919, 959, 1534, 1788, 2117, 2197
BtsI	GCAGTG	2 cut(s)	1910, 2373
BtsIMutI	CAGTG	4 cut(s)	391, 1910, 2020, 2373
BtuMI	TCGCGA	1 cut(s)	1478
BveI	ACCTGC	1 cut(s)	1761
Cac8I	GCNNGC	7 cut(s)	8, 329, 1031, 1974, 2286, 2392, 2469
CaiI	CAGNNNCTG	1 cut(s)	2036
CciI	TCATGA	3 cut(s)	1068, 1161, 1663
CfoI	GCGC	4 cut(s)	8, 10, 22, 2609
Cfr10I	RCCGGY	1 cut(s)	22
Cfr13I	GGNCC	3 cut(s)	313, 526, 1039
ClaI	ATCGAT	1 cut(s)	1744
CseI	GACGC	1 cut(s)	1386
Csp6I	GTAC	5 cut(s)	692, 921, 1526, 2063, 2349
CviQI	GTAC	5 cut(s)	692, 921, 1526, 2063, 2349
DdeI	CTNAG	9 cut(s)	65, 275, 450, 618, 1329, 2240, 2265, 2280, 2357
DpnI	GATC	9 cut(s)	90, 249, 501, 599, 1065, 1173, 1438, 1845, 2559
DpnII	GATC	9 cut(s)	88, 247, 499, 597, 1063, 1171, 1436, 1843, 2557
DraI	TTTAAA	1 cut(s)	813
Eam1104I	CTCTTC	1 cut(s)	129
EarI	CTCTTC	1 cut(s)	129
Ecl136II	GAGCTC	2 cut(s)	400, 1328
Eco130I	CCWWGG	1 cut(s)	2126
Eco24I	GRGCYC	2 cut(s)	402, 1330
Eco32I	GATATC	2 cut(s)	661, 1147
Eco47I	GGWCC	2 cut(s)	313, 1039
Eco53kI	GAGCTC	2 cut(s)	400, 1328
Eco57I	CTGAAG	1 cut(s)	708
Eco81I	CCTNAGG	1 cut(s)	2240
EcoICRI	GAGCTC	2 cut(s)	400, 1328
EcoNI	CCTNNNNNAGG	1 cut(s)	1410
EcoRI	GAATTC	1 cut(s)	865
EcoRII	CCWGG	2 cut(s)	2189, 2361
EcoRV	GATATC	2 cut(s)	661, 1147
EcoT14I	CCWWGG	1 cut(s)	2126
EcoT22I	ATGCAT	2 cut(s)	1272, 1726
EcoT38I	GRGCYC	2 cut(s)	402, 1330
ErhI	CCWWGG	1 cut(s)	2126
FalI	AAGNNNNNCTT	4 cut(s)	1541, 1573, 1787, 1819
FaqI	GGGAC	3 cut(s)	326, 1153, 2221
FauNDI	CATATG	3 cut(s)	308, 320, 1192
FbaI	TGATCA	2 cut(s)	88, 499
FblI	GTMKAC	1 cut(s)	1300
Fnu4HI	GCNGC	9 cut(s)	44, 298, 325, 1046, 1629, 2103, 2340, 2395, 2551
FokI	GGATG	9 cut(s)	98, 215, 854, 926, 946, 1521, 1775, 2104, 2184
FriOI	GRGCYC	2 cut(s)	402, 1330
Fsp4HI	GCNGC	9 cut(s)	44, 298, 325, 1046, 1629, 2103, 2340, 2395, 2551
FspBI	CTAG	7 cut(s)	831, 945, 1304, 1910, 1953, 2285, 2544
GlaI	GCGC	4 cut(s)	7, 9, 21, 2608
GluI	GCNGC	9 cut(s)	44, 298, 325, 1046, 1629, 2103, 2340, 2395, 2551
GsaI	CCCAGC	1 cut(s)	143
HaeII	RGCGCY	1 cut(s)	23
HaeIII	GGCC	3 cut(s)	528, 749, 848
HapII	CCGG	2 cut(s)	23, 2633
HgaI	GACGC	1 cut(s)	1386
HhaI	GCGC	4 cut(s)	8, 10, 22, 2609
Hin6I	GCGC	4 cut(s)	6, 8, 20, 2607
HinP1I	GCGC	4 cut(s)	6, 8, 20, 2607
HincII	GTYRAC	3 cut(s)	115, 562, 2428
HindII	GTYRAC	3 cut(s)	115, 562, 2428
HindIII	AAGCTT	1 cut(s)	1124
HpaII	CCGG	2 cut(s)	23, 2633
HphI	GGTGA	3 cut(s)	653, 1523, 2622
Hpy166II	GTNNAC	8 cut(s)	58, 115, 562, 1301, 1526, 1879, 2349, 2428
Hpy8I	GTNNAC	8 cut(s)	58, 115, 562, 1301, 1526, 1879, 2349, 2428
Hpy99I	CGWCG	1 cut(s)	2171
HpyCH4IV	ACGT	3 cut(s)	794, 819, 1660
HpyF10VI	GCNNNNNNNGC	6 cut(s)	421, 854, 887, 955, 1051, 1372
HpyF3I	CTNAG	9 cut(s)	65, 275, 450, 618, 1329, 2240, 2265, 2280, 2357
HpySE526I	ACGT	3 cut(s)	794, 819, 1660
HspAI	GCGC	4 cut(s)	6, 8, 20, 2607
Ksp22I	TGATCA	2 cut(s)	88, 499
Kzo9I	GATC	9 cut(s)	88, 247, 499, 597, 1063, 1171, 1436, 1843, 2557
LguI	GCTCTTC	1 cut(s)	129
LmnI	GCTCC	5 cut(s)	124, 286, 397, 405, 1325
Lsp1109I	GCAGC	9 cut(s)	55, 284, 336, 1057, 1615, 2089, 2326, 2406, 2537
MaeI	CTAG	7 cut(s)	831, 945, 1304, 1910, 1953, 2285, 2544
MaeII	ACGT	3 cut(s)	794, 819, 1660
MaeIII	GTNAC	4 cut(s)	106, 713, 1093, 1594
MalI	GATC	9 cut(s)	90, 249, 501, 599, 1065, 1173, 1438, 1845, 2559
MboI	GATC	9 cut(s)	88, 247, 499, 597, 1063, 1171, 1436, 1843, 2557
MfeI	CAATTG	1 cut(s)	1713
MflI	RGATCY	4 cut(s)	247, 1063, 1171, 1436
MhlI	GDGCHC	2 cut(s)	402, 1330
MlyI	GAGTC	4 cut(s)	1120, 1221, 2243, 2433
MmeI	TCCRAC	2 cut(s)	727, 784
Mph1103I	ATGCAT	2 cut(s)	1272, 1726
MroXI	GAANNNNTTC	2 cut(s)	635, 1290
MslI	CAYNNNNRTG	1 cut(s)	2565
MspCI	CTTAAG	1 cut(s)	437
MspI	CCGG	2 cut(s)	23, 2633
MspR9I	CCNGG	2 cut(s)	2191, 2363
MunI	CAATTG	1 cut(s)	1713
MvaI	CCWGG	2 cut(s)	2191, 2363
MvnI	CGCG	4 cut(s)	8, 1478, 2439, 2609
MwoI	GCNNNNNNNGC	6 cut(s)	421, 854, 887, 955, 1051, 1372
NdeI	CATATG	3 cut(s)	308, 320, 1192
NdeII	GATC	9 cut(s)	88, 247, 499, 597, 1063, 1171, 1436, 1843, 2557
NheI	GCTAGC	1 cut(s)	2284
NlaIV	GGNNCC	7 cut(s)	249, 288, 314, 670, 1173, 1924, 1933
NmeAIII	GCCGAG	1 cut(s)	1742
NmuCI	GTSAC	1 cut(s)	106
NruI	TCGCGA	1 cut(s)	1478
NsiI	ATGCAT	2 cut(s)	1272, 1726
NspI	RCATGY	2 cut(s)	734, 1270
PagI	TCATGA	3 cut(s)	1068, 1161, 1663
PalAI	GGCGCGCC	1 cut(s)	6
PauI	GCGCGC	1 cut(s)	6
PciI	ACATGT	1 cut(s)	730
PciSI	GCTCTTC	1 cut(s)	129
PdmI	GAANNNNTTC	2 cut(s)	635, 1290
PfeI	GAWTC	7 cut(s)	192, 537, 974, 1080, 1165, 1307, 1832
PflFI	GACNNNGTC	1 cut(s)	2423
PkrI	GCNGC	9 cut(s)	45, 299, 326, 1047, 1630, 2104, 2341, 2396, 2552
PleI	GAGTC	4 cut(s)	1119, 1221, 2242, 2432
PpsI	GAGTC	4 cut(s)	1119, 1221, 2242, 2432
PscI	ACATGT	1 cut(s)	730
PsiI	TTATAA	2 cut(s)	1391, 1734
Psp124BI	GAGCTC	2 cut(s)	402, 1330
Psp6I	CCWGG	2 cut(s)	2189, 2361
PspFI	CCCAGC	1 cut(s)	139
PspGI	CCWGG	2 cut(s)	2189, 2361
PspN4I	GGNNCC	7 cut(s)	249, 288, 314, 670, 1173, 1924, 1933
PspPI	GGNCC	3 cut(s)	313, 526, 1039
PstI	CTGCAG	2 cut(s)	1035, 1633
PstNI	CAGNNNCTG	1 cut(s)	2036
PsuI	RGATCY	4 cut(s)	247, 1063, 1171, 1436
PsyI	GACNNNGTC	1 cut(s)	2423
PteI	GCGCGC	1 cut(s)	6
RruI	TCGCGA	1 cut(s)	1478
RsaI	GTAC	5 cut(s)	693, 922, 1527, 2064, 2350
RsaNI	GTAC	5 cut(s)	692, 921, 1526, 2063, 2349
RseI	CAYNNNNRTG	1 cut(s)	2565
SacI	GAGCTC	2 cut(s)	402, 1330
SapI	GCTCTTC	1 cut(s)	129
SatI	GCNGC	9 cut(s)	44, 298, 325, 1046, 1629, 2103, 2340, 2395, 2551
Sau3AI	GATC	9 cut(s)	88, 247, 499, 597, 1063, 1171, 1436, 1843, 2557
Sau96I	GGNCC	3 cut(s)	313, 526, 1039
SchI	GAGTC	4 cut(s)	1120, 1221, 2243, 2433
ScrFI	CCNGG	2 cut(s)	2191, 2363
SduI	GDGCHC	2 cut(s)	402, 1330
SfcI	CTRYAG	2 cut(s)	1031, 1629
SgsI	GGCGCGCC	1 cut(s)	6
SinI	GGWCC	2 cut(s)	313, 1039
SmiMI	CAYNNNNRTG	1 cut(s)	2565
SmlI	CTYRAG	3 cut(s)	437, 674, 1706
SmoI	CTYRAG	3 cut(s)	437, 674, 1706
SsiI	CCGC	6 cut(s)	969, 1792, 1935, 2186, 2251, 2642
SspI	AATATT	4 cut(s)	257, 636, 1491, 2000
SspMI	CTAG	7 cut(s)	831, 945, 1304, 1910, 1953, 2285, 2544
SstI	GAGCTC	2 cut(s)	402, 1330
StyD4I	CCNGG	2 cut(s)	2189, 2361
StyI	CCWWGG	1 cut(s)	2126
TaiI	ACGT	3 cut(s)	797, 822, 1663
TaqI	TCGA	6 cut(s)	38, 190, 1347, 1636, 1719, 1744
TatI	WGTACW	3 cut(s)	1525, 2062, 2348
TfiI	GAWTC	7 cut(s)	192, 537, 974, 1080, 1165, 1307, 1832
TscAI	CASTG	4 cut(s)	391, 1910, 2020, 2373
TseFI	GTSAC	1 cut(s)	106
TseI	GCWGC	9 cut(s)	43, 297, 324, 1045, 1628, 2102, 2339, 2394, 2550
Tsp45I	GTSAC	1 cut(s)	106
TspGWI	ACGGA	1 cut(s)	2436
TspRI	CASTG	4 cut(s)	391, 1910, 2020, 2373
Tth111I	GACNNNGTC	1 cut(s)	2423
Vha464I	CTTAAG	1 cut(s)	437
VpaK11BI	GGWCC	2 cut(s)	313, 1039
XagI	CCTNNNNNAGG	1 cut(s)	1410
XapI	RAATTY	3 cut(s)	865, 1287, 1864
XbaI	TCTAGA	1 cut(s)	2543
XceI	RCATGY	2 cut(s)	734, 1270
XmiI	GTMKAC	1 cut(s)	1300
XmnI	GAANNNNTTC	2 cut(s)	635, 1290
XspI	CTAG	7 cut(s)	831, 945, 1304, 1910, 1953, 2285, 2544
Zsp2I	ATGCAT	2 cut(s)	1272, 1726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.