Protein of unknown function, DUF604
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G15240 |
| fragaria_vesca | FvH4_6g43591 FvH4_6g43591 FvH4_6g43591 FvH4_6g43591 |
| malus_domestica | MD08G1011300.v1.1 MD09G1104500.v1.1 MD17G1092100.v1.1 |
| prunus_persica | Prupe.3G221200_v2.0.a1 Prupe.3G221200_v2.0.a1 |
| pyrus_communis | pycom09g02760 pycom17g08920 |
| rosa_chinensis | RchiOBHm_Chr2g0160181 |
| rosa_laevigata | RLG00000021202 |
| rosa_multiflora | Rmu_sc0000403.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00089980 |
| rosa_rugosa | Rorug02G0482200 |
| rosa_samantha | Rh2AG547600 Rh2BG560800 Rh2CG531400 Rh2DG569400 |
| rosa_wichuraiana | Rw2G045280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 431 |
| Acc36I | ACCTGC | 1 cut(s) | 684 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 742 |
| AccBSI | CCGCTC | 2 cut(s) | 324, 1185 |
| AclI | AACGTT | 1 cut(s) | 1163 |
| AclWI | GGATC | 4 cut(s) | 423, 499, 956, 1022 |
| AcsI | RAATTY | 2 cut(s) | 892, 1440 |
| AfaI | GTAC | 6 cut(s) | 68, 476, 629, 692, 788, 800 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 178, 327, 742, 952, 1482 |
| AgsI | TTSAA | 2 cut(s) | 1013, 1216 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1256 |
| AjnI | CCWGG | 5 cut(s) | 326, 862, 1034, 1266, 1313 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 680, 712 |
| AluBI | AGCT | 8 cut(s) | 363, 672, 838, 995, 1016, 1299, 1390, 1396 |
| AluI | AGCT | 8 cut(s) | 363, 672, 838, 995, 1016, 1299, 1390, 1396 |
| Alw21I | GWGCWC | 2 cut(s) | 365, 840 |
| Alw26I | GTCTC | 2 cut(s) | 454, 1485 |
| AlwI | GGATC | 4 cut(s) | 423, 499, 956, 1022 |
| Ama87I | CYCGRG | 2 cut(s) | 813, 1300 |
| AoxI | GGCC | 1 cut(s) | 180 |
| ApeKI | GCWGC | 4 cut(s) | 493, 956, 1045, 1434 |
| ApoI | RAATTY | 2 cut(s) | 892, 1440 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 979, 1011 |
| AspLEI | GCGC | 6 cut(s) | 244, 288, 404, 517, 519, 521 |
| AspS9I | GGNCC | 3 cut(s) | 181, 330, 498 |
| AsuHPI | GGTGA | 3 cut(s) | 622, 918, 935 |
| AsuII | TTCGAA | 1 cut(s) | 699 |
| AvaI | CYCGRG | 2 cut(s) | 813, 1300 |
| AvaII | GGWCC | 2 cut(s) | 330, 498 |
| BanII | GRGCYC | 2 cut(s) | 365, 840 |
| BauI | CACGAG | 1 cut(s) | 772 |
| BbsI | GAAGAC | 1 cut(s) | 376 |
| Bbv12I | GWGCWC | 2 cut(s) | 365, 840 |
| BbvI | GCAGC | 4 cut(s) | 480, 943, 1057, 1421 |
| BccI | CCATC | 1 cut(s) | 314 |
| BceAI | ACGGC | 2 cut(s) | 765, 1410 |
| BciT130I | CCWGG | 5 cut(s) | 328, 864, 1036, 1268, 1315 |
| BciVI | GTATCC | 1 cut(s) | 1291 |
| BcoDI | GTCTC | 2 cut(s) | 454, 1485 |
| BfaI | CTAG | 4 cut(s) | 759, 1233, 1391, 1519 |
| BfmI | CTRYAG | 3 cut(s) | 677, 957, 1154 |
| BfuAI | ACCTGC | 1 cut(s) | 684 |
| BfuI | GTATCC | 1 cut(s) | 1291 |
| BglII | AGATCT | 1 cut(s) | 1141 |
| BisI | GCNGC | 7 cut(s) | 245, 289, 337, 494, 957, 1046, 1435 |
| BlsI | GCNGC | 7 cut(s) | 246, 290, 338, 495, 958, 1047, 1436 |
| BmcAI | AGTACT | 1 cut(s) | 692 |
| Bme1390I | CCNGG | 5 cut(s) | 328, 864, 1036, 1268, 1315 |
| Bme18I | GGWCC | 2 cut(s) | 330, 498 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1256 |
| BmeT110I | CYCGRG | 2 cut(s) | 813, 1300 |
| BmgT120I | GGNCC | 3 cut(s) | 181, 330, 498 |
| BmiI | GGNNCC | 1 cut(s) | 332 |
| BmrFI | CCNGG | 5 cut(s) | 328, 864, 1036, 1268, 1315 |
| BmsI | GCATC | 3 cut(s) | 138, 799, 1390 |
| BoxI | GACNNNNGTC | 1 cut(s) | 443 |
| BpiI | GAAGAC | 1 cut(s) | 376 |
| BpmI | CTGGAG | 1 cut(s) | 379 |
| Bpu14I | TTCGAA | 1 cut(s) | 699 |
| BpuEI | CTTGAG | 1 cut(s) | 975 |
| BsaBI | GATNNNNATC | 1 cut(s) | 636 |
| BsaJI | CCNNGG | 2 cut(s) | 863, 1172 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 259, 289, 1171, 1174, 1201, 1204 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 178, 327, 742, 952, 1482 |
| Bse3DI | GCAATG | 1 cut(s) | 1132 |
| Bse8I | GATNNNNATC | 1 cut(s) | 636 |
| BseBI | CCWGG | 5 cut(s) | 328, 864, 1036, 1268, 1315 |
| BseDI | CCNNGG | 2 cut(s) | 863, 1172 |
| BseGI | GGATG | 1 cut(s) | 559 |
| BseJI | GATNNNNATC | 1 cut(s) | 636 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 178, 327, 742, 952, 1482 |
| BseMI | GCAATG | 1 cut(s) | 1132 |
| BseMII | CTCAG | 1 cut(s) | 1152 |
| BsePI | GCGCGC | 2 cut(s) | 515, 517 |
| BseRI | GAGGAG | 4 cut(s) | 176, 307, 1192, 1195 |
| BseXI | GCAGC | 4 cut(s) | 480, 943, 1057, 1421 |
| BsgI | GTGCAG | 2 cut(s) | 897, 1507 |
| Bsh1285I | CGRYCG | 4 cut(s) | 400, 427, 541, 640 |
| BshFI | GGCC | 1 cut(s) | 182 |
| BsiEI | CGRYCG | 4 cut(s) | 400, 427, 541, 640 |
| BsiHKAI | GWGCWC | 2 cut(s) | 365, 840 |
| BsiHKCI | CYCGRG | 2 cut(s) | 813, 1300 |
| BsiSI | CCGG | 3 cut(s) | 420, 453, 551 |
| BslFI | GGGAC | 2 cut(s) | 316, 922 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 178, 327, 742, 952, 1482 |
| BsmAI | GTCTC | 2 cut(s) | 454, 1485 |
| BsmBI | CGTCTC | 1 cut(s) | 454 |
| BsmFI | GGGAC | 2 cut(s) | 316, 922 |
| BsmI | GAATGC | 3 cut(s) | 688, 909, 1072 |
| BsnI | GGCC | 1 cut(s) | 182 |
| BsoBI | CYCGRG | 2 cut(s) | 813, 1300 |
| Bsp119I | TTCGAA | 1 cut(s) | 699 |
| Bsp1286I | GDGCHC | 2 cut(s) | 365, 840 |
| Bsp143I | GATC | 9 cut(s) | 428, 504, 538, 631, 637, 961, 1027, 1141, 1368 |
| Bsp19I | CCATGG | 1 cut(s) | 1172 |
| Bsp68I | TCGCGA | 1 cut(s) | 437 |
| BspANI | GGCC | 1 cut(s) | 182 |
| BspCNI | CTCAG | 1 cut(s) | 1151 |
| BspLI | GGNNCC | 1 cut(s) | 332 |
| BspMAI | CTGCAG | 3 cut(s) | 681, 961, 1158 |
| BspMI | ACCTGC | 1 cut(s) | 684 |
| BspPI | GGATC | 4 cut(s) | 423, 499, 956, 1022 |
| BspT104I | TTCGAA | 1 cut(s) | 699 |
| BsrBI | CCGCTC | 2 cut(s) | 324, 1185 |
| BsrDI | GCAATG | 1 cut(s) | 1132 |
| BssECI | CCNNGG | 2 cut(s) | 863, 1172 |
| BssHII | GCGCGC | 2 cut(s) | 515, 517 |
| BssMI | GATC | 9 cut(s) | 428, 504, 538, 631, 637, 961, 1027, 1141, 1368 |
| BssSI | CACGAG | 1 cut(s) | 772 |
| BssT1I | CCWWGG | 1 cut(s) | 1172 |
| Bst2BI | CACGAG | 1 cut(s) | 772 |
| Bst2UI | CCWGG | 5 cut(s) | 328, 864, 1036, 1268, 1315 |
| Bst6I | CTCTTC | 2 cut(s) | 230, 1401 |
| BstBI | TTCGAA | 1 cut(s) | 699 |
| BstC8I | GCNNGC | 8 cut(s) | 100, 341, 517, 519, 548, 744, 826, 1123 |
| BstDEI | CTNAG | 1 cut(s) | 1138 |
| BstDSI | CCRYGG | 1 cut(s) | 1172 |
| BstF5I | GGATG | 1 cut(s) | 559 |
| BstHHI | GCGC | 6 cut(s) | 244, 288, 404, 517, 519, 521 |
| BstKTI | GATC | 9 cut(s) | 431, 507, 541, 634, 640, 964, 1030, 1144, 1371 |
| BstMAI | GTCTC | 2 cut(s) | 454, 1485 |
| BstMBI | GATC | 9 cut(s) | 428, 504, 538, 631, 637, 961, 1027, 1141, 1368 |
| BstMCI | CGRYCG | 4 cut(s) | 400, 427, 541, 640 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 104, 360, 830, 1431 |
| BstNI | CCWGG | 5 cut(s) | 328, 864, 1036, 1268, 1315 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 443 |
| BstSCI | CCNGG | 5 cut(s) | 326, 862, 1034, 1266, 1313 |
| BstSFI | CTRYAG | 3 cut(s) | 677, 957, 1154 |
| BstV1I | GCAGC | 4 cut(s) | 480, 943, 1057, 1421 |
| BstV2I | GAAGAC | 1 cut(s) | 376 |
| BstX2I | RGATCY | 2 cut(s) | 961, 1141 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 863 |
| BstYI | RGATCY | 2 cut(s) | 961, 1141 |
| BsuI | GTATCC | 1 cut(s) | 1291 |
| BsuRI | GGCC | 1 cut(s) | 182 |
| BtgI | CCRYGG | 1 cut(s) | 1172 |
| BtgZI | GCGATG | 2 cut(s) | 292, 822 |
| BtsCI | GGATG | 1 cut(s) | 559 |
| BtsI | GCAGTG | 1 cut(s) | 1151 |
| BtsIMutI | CAGTG | 2 cut(s) | 1151, 1436 |
| BtuMI | TCGCGA | 1 cut(s) | 437 |
| BveI | ACCTGC | 1 cut(s) | 684 |
| Cac8I | GCNNGC | 8 cut(s) | 100, 341, 517, 519, 548, 744, 826, 1123 |
| CfoI | GCGC | 6 cut(s) | 244, 288, 404, 517, 519, 521 |
| Cfr13I | GGNCC | 3 cut(s) | 181, 330, 498 |
| CpoI | CGGWCCG | 1 cut(s) | 498 |
| CseI | GACGC | 2 cut(s) | 370, 625 |
| Csp6I | GTAC | 6 cut(s) | 67, 475, 628, 691, 787, 799 |
| CspI | CGGWCCG | 1 cut(s) | 498 |
| CviAII | CATG | 8 cut(s) | 857, 979, 1095, 1173, 1210, 1292, 1465, 1510 |
| CviQI | GTAC | 6 cut(s) | 67, 475, 628, 691, 787, 799 |
| DdeI | CTNAG | 1 cut(s) | 1138 |
| DpnI | GATC | 9 cut(s) | 430, 506, 540, 633, 639, 963, 1029, 1143, 1370 |
| DpnII | GATC | 9 cut(s) | 428, 504, 538, 631, 637, 961, 1027, 1141, 1368 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 431 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1256 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 431 |
| Eam1104I | CTCTTC | 2 cut(s) | 230, 1401 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1256 |
| EarI | CTCTTC | 2 cut(s) | 230, 1401 |
| EciI | GGCGGA | 4 cut(s) | 85, 341, 732, 848 |
| Ecl136II | GAGCTC | 2 cut(s) | 363, 838 |
| Eco130I | CCWWGG | 1 cut(s) | 1172 |
| Eco24I | GRGCYC | 2 cut(s) | 365, 840 |
| Eco32I | GATATC | 1 cut(s) | 1506 |
| Eco47I | GGWCC | 2 cut(s) | 330, 498 |
| Eco53kI | GAGCTC | 2 cut(s) | 363, 838 |
| Eco88I | CYCGRG | 2 cut(s) | 813, 1300 |
| EcoICRI | GAGCTC | 2 cut(s) | 363, 838 |
| EcoRII | CCWGG | 5 cut(s) | 326, 862, 1034, 1266, 1313 |
| EcoRV | GATATC | 1 cut(s) | 1506 |
| EcoT14I | CCWWGG | 1 cut(s) | 1172 |
| EcoT38I | GRGCYC | 2 cut(s) | 365, 840 |
| ErhI | CCWWGG | 1 cut(s) | 1172 |
| Esp3I | CGTCTC | 1 cut(s) | 454 |
| FaeI | CATG | 8 cut(s) | 860, 982, 1098, 1176, 1213, 1295, 1468, 1513 |
| FaqI | GGGAC | 2 cut(s) | 316, 922 |
| FatI | CATG | 8 cut(s) | 856, 978, 1094, 1172, 1209, 1291, 1464, 1509 |
| FauI | CCCGC | 9 cut(s) | 24, 179, 269, 329, 341, 376, 386, 473, 879 |
| Fnu4HI | GCNGC | 7 cut(s) | 245, 289, 337, 494, 957, 1046, 1435 |
| FokI | GGATG | 1 cut(s) | 566 |
| FriOI | GRGCYC | 2 cut(s) | 365, 840 |
| Fsp4HI | GCNGC | 7 cut(s) | 245, 289, 337, 494, 957, 1046, 1435 |
| FspBI | CTAG | 4 cut(s) | 759, 1233, 1391, 1519 |
| GlaI | GCGC | 6 cut(s) | 243, 287, 403, 516, 518, 520 |
| GluI | GCNGC | 7 cut(s) | 245, 289, 337, 494, 957, 1046, 1435 |
| GsuI | CTGGAG | 1 cut(s) | 379 |
| HaeIII | GGCC | 1 cut(s) | 182 |
| HapII | CCGG | 3 cut(s) | 420, 453, 551 |
| HgaI | GACGC | 2 cut(s) | 370, 625 |
| HhaI | GCGC | 6 cut(s) | 244, 288, 404, 517, 519, 521 |
| Hin1II | CATG | 8 cut(s) | 860, 982, 1098, 1176, 1213, 1295, 1468, 1513 |
| Hin6I | GCGC | 6 cut(s) | 242, 286, 402, 515, 517, 519 |
| HinP1I | GCGC | 6 cut(s) | 242, 286, 402, 515, 517, 519 |
| HincII | GTYRAC | 2 cut(s) | 852, 1080 |
| HindII | GTYRAC | 2 cut(s) | 852, 1080 |
| HindIII | AAGCTT | 1 cut(s) | 993 |
| HinfI | GANTC | 7 cut(s) | 114, 413, 604, 770, 988, 1357, 1460 |
| HpaII | CCGG | 3 cut(s) | 420, 453, 551 |
| HphI | GGTGA | 3 cut(s) | 622, 918, 935 |
| Hpy166II | GTNNAC | 3 cut(s) | 477, 852, 1080 |
| Hpy188I | TCNGA | 4 cut(s) | 113, 667, 1141, 1373 |
| Hpy188III | TCNNGA | 6 cut(s) | 358, 436, 601, 635, 655, 1361 |
| Hpy8I | GTNNAC | 3 cut(s) | 477, 852, 1080 |
| Hpy99I | CGWCG | 7 cut(s) | 437, 449, 581, 584, 602, 656, 1453 |
| HpyAV | CCTTC | 2 cut(s) | 950, 1408 |
| HpyCH4IV | ACGT | 2 cut(s) | 651, 1163 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 104, 360, 830, 1431 |
| HpyF3I | CTNAG | 1 cut(s) | 1138 |
| HpySE526I | ACGT | 2 cut(s) | 651, 1163 |
| Hsp92II | CATG | 8 cut(s) | 860, 982, 1098, 1176, 1213, 1295, 1468, 1513 |
| HspAI | GCGC | 6 cut(s) | 242, 286, 402, 515, 517, 519 |
| Kzo9I | GATC | 9 cut(s) | 428, 504, 538, 631, 637, 961, 1027, 1141, 1368 |
| LmnI | GCTCC | 7 cut(s) | 329, 360, 368, 657, 835, 1182, 1340 |
| Lsp1109I | GCAGC | 4 cut(s) | 480, 943, 1057, 1421 |
| LweI | GCATC | 3 cut(s) | 138, 799, 1390 |
| MaeI | CTAG | 4 cut(s) | 759, 1233, 1391, 1519 |
| MaeII | ACGT | 2 cut(s) | 651, 1163 |
| MaeIII | GTNAC | 4 cut(s) | 53, 791, 924, 1304 |
| MalI | GATC | 9 cut(s) | 430, 506, 540, 633, 639, 963, 1029, 1143, 1370 |
| MauBI | CGCGCGCG | 1 cut(s) | 517 |
| MbiI | CCGCTC | 2 cut(s) | 324, 1185 |
| MboI | GATC | 9 cut(s) | 428, 504, 538, 631, 637, 961, 1027, 1141, 1368 |
| MboII | GAAGA | 8 cut(s) | 38, 217, 220, 223, 376, 586, 961, 1418 |
| MflI | RGATCY | 2 cut(s) | 961, 1141 |
| MhlI | GDGCHC | 2 cut(s) | 365, 840 |
| MluCI | AATT | 3 cut(s) | 892, 1330, 1440 |
| MlyI | GAGTC | 3 cut(s) | 764, 982, 1454 |
| MseI | TTAA | 2 cut(s) | 62, 191 |
| MspI | CCGG | 3 cut(s) | 420, 453, 551 |
| MspR9I | CCNGG | 5 cut(s) | 328, 864, 1036, 1268, 1315 |
| Mva1269I | GAATGC | 3 cut(s) | 688, 909, 1072 |
| MvaI | CCWGG | 5 cut(s) | 328, 864, 1036, 1268, 1315 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 104, 360, 830, 1431 |
| NcoI | CCATGG | 1 cut(s) | 1172 |
| NdeII | GATC | 9 cut(s) | 428, 504, 538, 631, 637, 961, 1027, 1141, 1368 |
| NlaIII | CATG | 8 cut(s) | 860, 982, 1098, 1176, 1213, 1295, 1468, 1513 |
| NlaIV | GGNNCC | 1 cut(s) | 332 |
| NmeAIII | GCCGAG | 2 cut(s) | 158, 819 |
| NmuCI | GTSAC | 2 cut(s) | 791, 924 |
| NruI | TCGCGA | 1 cut(s) | 437 |
| NspV | TTCGAA | 1 cut(s) | 699 |
| PaeR7I | CTCGAG | 1 cut(s) | 1300 |
| PauI | GCGCGC | 2 cut(s) | 515, 517 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 393, 441, 453, 543, 573, 579 |
| PctI | GAATGC | 3 cut(s) | 688, 909, 1072 |
| PfeI | GAWTC | 4 cut(s) | 114, 413, 604, 1357 |
| PflFI | GACNNNGTC | 1 cut(s) | 619 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 742 |
| PfoI | TCCNGGA | 1 cut(s) | 1266 |
| PkrI | GCNGC | 7 cut(s) | 246, 290, 338, 495, 958, 1047, 1436 |
| Ple19I | CGATCG | 2 cut(s) | 541, 640 |
| PleI | GAGTC | 3 cut(s) | 764, 982, 1454 |
| PpsI | GAGTC | 3 cut(s) | 764, 982, 1454 |
| PshAI | GACNNNNGTC | 1 cut(s) | 443 |
| Psp124BI | GAGCTC | 2 cut(s) | 365, 840 |
| Psp1406I | AACGTT | 1 cut(s) | 1163 |
| Psp6I | CCWGG | 5 cut(s) | 326, 862, 1034, 1266, 1313 |
| PspGI | CCWGG | 5 cut(s) | 326, 862, 1034, 1266, 1313 |
| PspN4I | GGNNCC | 1 cut(s) | 332 |
| PspPI | GGNCC | 3 cut(s) | 181, 330, 498 |
| PspXI | VCTCGAGB | 1 cut(s) | 1300 |
| PstI | CTGCAG | 3 cut(s) | 681, 961, 1158 |
| PsuI | RGATCY | 2 cut(s) | 961, 1141 |
| PsyI | GACNNNGTC | 1 cut(s) | 619 |
| PteI | GCGCGC | 2 cut(s) | 515, 517 |
| PvuI | CGATCG | 2 cut(s) | 541, 640 |
| RruI | TCGCGA | 1 cut(s) | 437 |
| RsaI | GTAC | 6 cut(s) | 68, 476, 629, 692, 788, 800 |
| RsaNI | GTAC | 6 cut(s) | 67, 475, 628, 691, 787, 799 |
| Rsr2I | CGGWCCG | 1 cut(s) | 498 |
| RsrII | CGGWCCG | 1 cut(s) | 498 |
| SacI | GAGCTC | 2 cut(s) | 365, 840 |
| SaqAI | TTAA | 2 cut(s) | 62, 191 |
| SatI | GCNGC | 7 cut(s) | 245, 289, 337, 494, 957, 1046, 1435 |
| Sau3AI | GATC | 9 cut(s) | 428, 504, 538, 631, 637, 961, 1027, 1141, 1368 |
| Sau96I | GGNCC | 3 cut(s) | 181, 330, 498 |
| ScaI | AGTACT | 1 cut(s) | 692 |
| SchI | GAGTC | 3 cut(s) | 764, 982, 1454 |
| ScrFI | CCNGG | 5 cut(s) | 328, 864, 1036, 1268, 1315 |
| SduI | GDGCHC | 2 cut(s) | 365, 840 |
| SfaNI | GCATC | 3 cut(s) | 138, 799, 1390 |
| SfcI | CTRYAG | 3 cut(s) | 677, 957, 1154 |
| Sfr274I | CTCGAG | 1 cut(s) | 1300 |
| SfuI | TTCGAA | 1 cut(s) | 699 |
| SinI | GGWCC | 2 cut(s) | 330, 498 |
| SlaI | CTCGAG | 1 cut(s) | 1300 |
| SmlI | CTYRAG | 2 cut(s) | 990, 1300 |
| SmoI | CTYRAG | 2 cut(s) | 990, 1300 |
| Sse9I | AATT | 3 cut(s) | 892, 1330, 1440 |
| SspMI | CTAG | 4 cut(s) | 759, 1233, 1391, 1519 |
| SstI | GAGCTC | 2 cut(s) | 365, 840 |
| StyD4I | CCNGG | 5 cut(s) | 326, 862, 1034, 1266, 1313 |
| StyI | CCWWGG | 1 cut(s) | 1172 |
| TaiI | ACGT | 2 cut(s) | 654, 1166 |
| TaqI | TCGA | 8 cut(s) | 396, 537, 600, 623, 699, 768, 1194, 1301 |
| TaqII | GACCGA | 1 cut(s) | 441 |
| TasI | AATT | 3 cut(s) | 892, 1330, 1440 |
| TatI | WGTACW | 1 cut(s) | 690 |
| TauI | GCSGC | 3 cut(s) | 247, 291, 339 |
| TfiI | GAWTC | 4 cut(s) | 114, 413, 604, 1357 |
| Tru1I | TTAA | 2 cut(s) | 62, 191 |
| Tru9I | TTAA | 2 cut(s) | 62, 191 |
| TscAI | CASTG | 2 cut(s) | 1158, 1436 |
| TseFI | GTSAC | 2 cut(s) | 791, 924 |
| TseI | GCWGC | 4 cut(s) | 493, 956, 1045, 1434 |
| Tsp45I | GTSAC | 2 cut(s) | 791, 924 |
| TspDTI | ATGAA | 5 cut(s) | 860, 995, 1143, 1198, 1427 |
| TspGWI | ACGGA | 6 cut(s) | 133, 190, 421, 462, 497, 816 |
| TspRI | CASTG | 2 cut(s) | 1158, 1436 |
| Tth111I | GACNNNGTC | 1 cut(s) | 619 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 742 |
| VpaK11BI | GGWCC | 2 cut(s) | 330, 498 |
| XapI | RAATTY | 2 cut(s) | 892, 1440 |
| XhoI | CTCGAG | 1 cut(s) | 1300 |
| XspI | CTAG | 4 cut(s) | 759, 1233, 1391, 1519 |
| ZrmI | AGTACT | 1 cut(s) | 692 |