Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0008287

Physical Location & Seq

Genomic Coordinates Forward (+)

23298306 .. 23302188

Gene Structure 3883 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1194400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGGGCTGCACCCAGTCCAAGATCGAGAACGAAGAAGCGGTCTCCCGCTGCAAAGATCGCAAGCTCTTCATGAAACAAGCCGTCTCCTTTCGTAACGCCTTCGCCGCCGCCCACTCCTCCTACGCCATCTACTTGAAGAACACCGGCGCCGCCTTAAGCGACTACGCCCAGGGCGAGGTGCTCGGTCCATACCCCCAGCCCAATTTGCCCTCCTCCGCCGCCCTCGGCCCCCCCGCCCCGCTTCCTTTTGTCGATAATCTTCCTCCGCCTCCGCCGCTCCCTAGCTTCTCCGGCTCCCCTTTACAGCGCGCCGCCAGCATGCCCGAGATCAAACCCGAACCGAAGCCCCTGCCCAAGTCCAAGCCCAAGCCCAAGCCCATCATCGAGGAGGACGAGGACGATGAGGTGATTGAGAGCGAGAGCTTGAGGCGGAGGAGCAGGAGCAGCCGGGGTAAAAGAGGGGTTGTGGAGAAAGATCACAATTCGGATGGTCCACCGCCAGTTTCATCTCCGGCTCCGCCGGTTTCGGTGGAGAGCCGGTCGGTGCCGCCGTTGCCACAGCATCGGGACAGCCCTTTTGACTACTTTTTCTCAGTGGATAATATGCCGGCGACGACGCTGGCCGACGCCGAAGAGATTGAGCGAAGGGTGTACGACGAAAGGCCGCCAACGAGAGTCGAGAGTATTGAAGAAGAGGAAGTGTTGGACGAAAGTCCGAAGAGGGTGGAAAAGGATGAAGAGGAAGAGGTAGAGAGGAGTTCGAAAGTCGAGGAGGTGGTAGTGGCGCCGCCGCCGCCTGCGGTGGCGGAGGTGGTGCCCGGGGGGTCCACTGGAAATAGCCTGAAGAAGCCGAAGGCGGCGGGGTCAAAGGGGACTGTGAATTTGGTGCAGATATTTGGGGAGCTTGATGACCATTTTCTCAAGGCTTCGGAGAGTGCCCATGATGTTTCCAAGATGTTGGAGGCCGCCCGGCTCCACTATCACTCCAATTTTGCTGATAATCGAGGGCATATTGATCACTCTGCTAGGGTGATGCGTGTTATTACATGGAATCGGTCTTTTCGAGGATTGGCGAATGTGGATGAGGGCAAGGATGACTTCGACTTGGAAGAGCACGAAACTCACGCTACCATCTTGGATAAATTGTTGGCGTGGGAGAAAAAGCTATACGATGAAGTCAAGGCCGGTGAGCTTATGAAATTTGAGTACCAAAAGAAGGTTGCCTCGCTGAACAGGGTGAAGAAACGGGGTAATAACTCTGAAGCATTGGAGAAGGCAAAAGCAGCCGTAAGTCATCTGCATACAAGATACATTGTTGACATGCAGTCCATGGATTCAACAGTAGCAGAGATAAACTCATTACGAGACGAACGGTTGTACCCAAAACTTGTTCAGCTTGTCGAGGGGATGACAATTATGTGGGCAACAATGCGATCTCACCATGAGACCCAATCGAATATTGCCAAAGAACTCAGGTGGTTGGACATCTCCCAATGTCCCAAGCACACAAGTGAGCACCACCATGAGCGCACGATACAACTGTTTGGTGTTGTGCAAGGGTGGCAGAGTGAGTTTGTGAAGCTTGTGAGTCAACAAAAGGAGTACATAAAGGCCCTCAACAGTTGGTTAAAACTTAATCTCATCCCCATTGAGAGCAACTTGAAGGAGAAGGTTTCTTCCCCTCCAAGAATTCAACGGCCCCCTATTCAGGGACTCCTCCTTGCGTGGCATGATCATCTTGAGAAACTTCCAGACGATGTTGCAAGAACTGCTATATACAACTTTGCTGCTGCAATCAATACTATTATGATCCACCAAGAGGAAGAAATTAAAATGAAGGAGAAATGTGAAGACACCCGGAAAGAACTTTCCCGCAAGATGAGACAGTTCCAAGAATGGTACGATAAAAATAAGCACAAGACCATTCCGGACGAAGGAGATACAGATGGGCCAGAAGGCCACACTCGAAGTGATGTGCTTGCAGAAAAGCAGTTTGCTGTGGAGATAGTGAAGAAGAGGTTAGAGGAGGAGGAGGAAACATATGAACGGCTAGGCCTTCAGGTGAGGGAGAAGTCGGTGGTAAGTCTTAAAACTCGCTTGCCAGAACTCTTTAGGGCGTTGTCGGATTTCGCCTATTCTTGTTCAGAAATGTACAGAGGCTTGAGGTCCAGATCACCCCATAATCCAAGTGAGAGCTCAGCAAGAGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

737

Amino Acids

83.4

Weight (kDa)

5.99

Isoelectric Point (pI)

63.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 59	2e-23	Protein of unknown function (DUF630)
DUF632	PF04782	295 - 600	6.8e-107	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008287)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52320 AT1G52320 AT1G52320 AT1G52320 AT1G52320
fragaria_vesca	FvH4_6g31260 FvH4_6g31260 FvH4_6g31260
malus_domestica	MD09G1212400.v1.1 MD17G1194400.v1.1
prunus_persica	Prupe.3G070400_v2.0.a1 Prupe.3G070400_v2.0.a1
pyrus_communis	pycom17g20020
rosa_chinensis	RchiOBHm_Chr2g0138001
rosa_laevigata	RLG00000019695
rosa_multiflora	Rmu_sc0002170.1_g000054
rosa_roxburghii	Rroxscaffold_2G00106600
rosa_rugosa	Rorug02G0348600
rosa_samantha	Rh2AG395000 Rh2BG402200 Rh2CG381600 Rh2DG416800
rosa_wichuraiana	Rw2G032300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	146, 544, 784, 814
AccBSI	CCGCTC	1 cut(s)	277
AccII	CGCG	1 cut(s)	309
AccIII	TCCGGA	1 cut(s)	1927
AclWI	GGATC	1 cut(s)	1804
AcoI	YGGCCR	1 cut(s)	621
AcsI	RAATTY	3 cut(s)	880, 1199, 1689
AcuI	CTGAAG	3 cut(s)	863, 1281, 2042
AcyI	GRCGYC	3 cut(s)	147, 627, 785
AfaI	GTAC	6 cut(s)	653, 1208, 1379, 1604, 1901, 2153
AfiI	CCNNNNNNNGG	6 cut(s)	175, 1216, 1708, 1709, 1819, 1934
AflII	CTTAAG	1 cut(s)	154
AgsI	TTSAA	5 cut(s)	136, 689, 1338, 1663, 1694
AhdI	GACNNNNNGTC	1 cut(s)	1324
AjnI	CCWGG	1 cut(s)	168
AleI	CACNNNNGTG	1 cut(s)	1509
AluBI	AGCT	9 cut(s)	64, 285, 423, 904, 1165, 1192, 1396, 1582, 2196
AluI	AGCT	9 cut(s)	64, 285, 423, 904, 1165, 1192, 1396, 1582, 2196
Alw21I	GWGCWC	4 cut(s)	183, 1116, 1518, 2198
Alw26I	GTCTC	5 cut(s)	46, 88, 1359, 1439, 1876
AlwI	GGATC	1 cut(s)	1804
Ama87I	CYCGRG	2 cut(s)	323, 818
Aor13HI	TCCGGA	1 cut(s)	1927
ApeKI	GCWGC	6 cut(s)	6, 48, 444, 1283, 1787, 1790
ApoI	RAATTY	3 cut(s)	880, 1199, 1689
ArsI	GACNNNNNNTTYG	6 cut(s)	24, 56, 560, 592, 865, 897
AspLEI	GCGC	5 cut(s)	149, 309, 311, 787, 1530
AspS9I	GGNCC	8 cut(s)	185, 227, 491, 825, 1612, 1698, 1949, 2166
AsuC2I	CCSGG	5 cut(s)	449, 819, 820, 970, 1858
AsuHPI	GGTGA	7 cut(s)	418, 1042, 1199, 1249, 1430, 2074, 2166
AsuII	TTCGAA	1 cut(s)	761
AvaI	CYCGRG	2 cut(s)	323, 818
AvaII	GGWCC	4 cut(s)	185, 491, 825, 2166
BaeGI	GKGCMC	2 cut(s)	819, 940
BaeI	ACNNNNGTAYC	4 cut(s)	1361, 1394, 1526, 1559
BanI	GGYRCC	4 cut(s)	146, 544, 784, 814
BanII	GRGCYC	1 cut(s)	2198
BbsI	GAAGAC	1 cut(s)	1857
Bbv12I	GWGCWC	4 cut(s)	183, 1116, 1518, 2198
BbvI	GCAGC	5 cut(s)	35, 456, 1295, 1774, 1777
BccI	CCATC	5 cut(s)	134, 386, 482, 1139, 1940
BceAI	ACGGC	5 cut(s)	65, 535, 1271, 1712, 2063
BcgI	CGANNNNNNTGC	2 cut(s)	331, 365
BciT130I	CCWGG	1 cut(s)	170
BclI	TGATCA	2 cut(s)	1015, 1732
BcnI	CCSGG	5 cut(s)	449, 819, 820, 970, 1858
BcoDI	GTCTC	5 cut(s)	46, 88, 1359, 1439, 1876
BfaI	CTAG	3 cut(s)	282, 1026, 2051
BfoI	RGCGCY	2 cut(s)	150, 788
BfrI	CTTAAG	1 cut(s)	154
BlpI	GCTNAGC	1 cut(s)	2197
Bme1390I	CCNGG	6 cut(s)	170, 449, 819, 820, 970, 1858
Bme18I	GGWCC	4 cut(s)	185, 491, 825, 2166
BmeRI	GACNNNNNGTC	1 cut(s)	1324
BmeT110I	CYCGRG	2 cut(s)	323, 818
BmgT120I	GGNCC	8 cut(s)	185, 227, 491, 825, 1612, 1698, 1949, 2166
BmrFI	CCNGG	6 cut(s)	170, 449, 819, 820, 970, 1858
BmrI	ACTGGG	1 cut(s)	7
BmsI	GCATC	2 cut(s)	571, 1023
BmuI	ACTGGG	1 cut(s)	7
BoxI	GACNNNNGTC	1 cut(s)	711
BpiI	GAAGAC	1 cut(s)	1857
BplI	GAGNNNNNCTC	2 cut(s)	1340, 1372
Bpu1102I	GCTNAGC	1 cut(s)	2197
Bpu14I	TTCGAA	1 cut(s)	761
BpuEI	CTTGAG	4 cut(s)	445, 905, 1760, 2182
BpuMI	CCSGG	5 cut(s)	449, 819, 820, 970, 1858
BsaHI	GRCGYC	3 cut(s)	147, 627, 785
BsaI	GGTCTC	2 cut(s)	46, 1439
BsaJI	CCNNGG	7 cut(s)	168, 169, 223, 448, 818, 819, 1329
BsaWI	WCCGGW	1 cut(s)	1927
BsaXI	ACNNNNNCTCC	4 cut(s)	524, 554, 968, 998
Bsc4I	CCNNNNNNNGG	6 cut(s)	175, 1216, 1708, 1709, 1819, 1934
Bse118I	RCCGGY	5 cut(s)	143, 520, 537, 607, 1184
Bse1I	ACTGG	3 cut(s)	13, 500, 835
BseAI	TCCGGA	1 cut(s)	1927
BseBI	CCWGG	1 cut(s)	170
BseDI	CCNNGG	7 cut(s)	168, 169, 223, 448, 818, 819, 1329
BseGI	GGATG	6 cut(s)	493, 739, 1087, 1099, 1413, 1641
BseLI	CCNNNNNNNGG	6 cut(s)	175, 1216, 1708, 1709, 1819, 1934
BseMII	CTCAG	3 cut(s)	606, 1486, 2211
BseNI	ACTGG	3 cut(s)	13, 500, 835
BsePI	GCGCGC	1 cut(s)	307
BseSI	GKGCMC	2 cut(s)	819, 940
BseXI	GCAGC	5 cut(s)	35, 456, 1295, 1774, 1777
BseYI	CCCAGC	1 cut(s)	195
BsgI	GTGCAG	1 cut(s)	908
Bsh1236I	CGCG	1 cut(s)	309
Bsh1285I	CGRYCG	1 cut(s)	542
BshNI	GGYRCC	4 cut(s)	146, 544, 784, 814
BsiEI	CGRYCG	1 cut(s)	542
BsiHKAI	GWGCWC	4 cut(s)	183, 1116, 1518, 2198
BsiHKCI	CYCGRG	2 cut(s)	323, 818
BslFI	GGGAC	4 cut(s)	581, 886, 1482, 1725
BslI	CCNNNNNNNGG	6 cut(s)	175, 1216, 1708, 1709, 1819, 1934
BsmAI	GTCTC	5 cut(s)	46, 88, 1359, 1439, 1876
BsmBI	CGTCTC	2 cut(s)	88, 1359
BsmFI	GGGAC	4 cut(s)	581, 886, 1482, 1725
Bso31I	GGTCTC	2 cut(s)	46, 1439
BsoBI	CYCGRG	2 cut(s)	323, 818
Bsp119I	TTCGAA	1 cut(s)	761
Bsp1286I	GDGCHC	6 cut(s)	183, 819, 940, 1116, 1518, 2198
Bsp13I	TCCGGA	1 cut(s)	1927
Bsp1407I	TGTACA	1 cut(s)	2151
Bsp143I	GATC	9 cut(s)	21, 55, 327, 475, 1015, 1433, 1732, 1809, 2171
Bsp1720I	GCTNAGC	1 cut(s)	2197
Bsp19I	CCATGG	1 cut(s)	1329
BspCNI	CTCAG	3 cut(s)	605, 1485, 2210
BspEI	TCCGGA	1 cut(s)	1927
BspFNI	CGCG	1 cut(s)	309
BspHI	TCATGA	1 cut(s)	69
BspPI	GGATC	1 cut(s)	1804
BspQI	GCTCTTC	2 cut(s)	71, 1104
BspT104I	TTCGAA	1 cut(s)	761
BspT107I	GGYRCC	4 cut(s)	146, 544, 784, 814
BspTI	CTTAAG	1 cut(s)	154
BspTNI	GGTCTC	2 cut(s)	46, 1439
BsrBI	CCGCTC	1 cut(s)	277
BsrFI	RCCGGY	5 cut(s)	143, 520, 537, 607, 1184
BsrGI	TGTACA	1 cut(s)	2151
BsrI	ACTGG	3 cut(s)	13, 500, 835
BssAI	RCCGGY	5 cut(s)	143, 520, 537, 607, 1184
BssECI	CCNNGG	7 cut(s)	168, 169, 223, 448, 818, 819, 1329
BssHII	GCGCGC	1 cut(s)	307
BssMI	GATC	9 cut(s)	21, 55, 327, 475, 1015, 1433, 1732, 1809, 2171
BssNI	GRCGYC	3 cut(s)	147, 627, 785
BssT1I	CCWWGG	1 cut(s)	1329
Bst2UI	CCWGG	1 cut(s)	170
Bst4CI	ACNGT	6 cut(s)	877, 1342, 1374, 1542, 1622, 1887
Bst6I	CTCTTC	8 cut(s)	71, 627, 687, 713, 732, 738, 1104, 2009
BstACI	GRCGYC	3 cut(s)	147, 627, 785
BstAFI	CTTAAG	1 cut(s)	154
BstAPI	GCANNNNNTGC	1 cut(s)	1769
BstAUI	TGTACA	1 cut(s)	2151
BstBI	TTCGAA	1 cut(s)	761
BstC8I	GCNNGC	9 cut(s)	62, 309, 316, 320, 609, 621, 798, 1980, 2099
BstDEI	CTNAG	3 cut(s)	592, 1472, 2197
BstDSI	CCRYGG	1 cut(s)	1329
BstF5I	GGATG	6 cut(s)	493, 739, 1087, 1099, 1413, 1641
BstFNI	CGCG	1 cut(s)	309
BstH2I	RGCGCY	2 cut(s)	150, 788
BstHHI	GCGC	5 cut(s)	149, 309, 311, 787, 1530
BstKTI	GATC	9 cut(s)	24, 58, 330, 478, 1018, 1436, 1735, 1812, 2174
BstMAI	GTCTC	5 cut(s)	46, 88, 1359, 1439, 1876
BstMBI	GATC	9 cut(s)	21, 55, 327, 475, 1015, 1433, 1732, 1809, 2171
BstMCI	CGRYCG	1 cut(s)	542
BstNI	CCWGG	1 cut(s)	170
BstNSI	RCATGY	2 cut(s)	322, 1324
BstPAI	GACNNNNGTC	1 cut(s)	711
BstSCI	CCNGG	6 cut(s)	168, 447, 817, 818, 968, 1856
BstSLI	GKGCMC	2 cut(s)	819, 940
BstUI	CGCG	1 cut(s)	309
BstV1I	GCAGC	5 cut(s)	35, 456, 1295, 1774, 1777
BstV2I	GAAGAC	1 cut(s)	1857
BstXI	CCANNNNNNTGG	1 cut(s)	958
BtgI	CCRYGG	1 cut(s)	1329
BtsCI	GGATG	6 cut(s)	493, 739, 1087, 1099, 1413, 1641
BtsIMutI	CAGTG	2 cut(s)	600, 828
Cac8I	GCNNGC	9 cut(s)	62, 309, 316, 320, 609, 621, 798, 1980, 2099
CciI	TCATGA	1 cut(s)	69
CfoI	GCGC	5 cut(s)	149, 309, 311, 787, 1530
Cfr10I	RCCGGY	5 cut(s)	143, 520, 537, 607, 1184
Cfr13I	GGNCC	8 cut(s)	185, 227, 491, 825, 1612, 1698, 1949, 2166
Cfr9I	CCCGGG	1 cut(s)	818
CseI	GACGC	2 cut(s)	625, 635
Csp6I	GTAC	6 cut(s)	652, 1207, 1378, 1603, 1900, 2152
CviAII	CATG	9 cut(s)	70, 319, 941, 1047, 1321, 1330, 1442, 1523, 1730
CviQI	GTAC	6 cut(s)	652, 1207, 1378, 1603, 1900, 2152
DdeI	CTNAG	3 cut(s)	592, 1472, 2197
DinI	GGCGCC	2 cut(s)	148, 786
DpnI	GATC	9 cut(s)	23, 57, 329, 477, 1017, 1435, 1734, 1811, 2173
DpnII	GATC	9 cut(s)	21, 55, 327, 475, 1015, 1433, 1732, 1809, 2171
DriI	GACNNNNNGTC	1 cut(s)	1324
EaeI	YGGCCR	1 cut(s)	621
Eam1104I	CTCTTC	8 cut(s)	71, 627, 687, 713, 732, 738, 1104, 2009
Eam1105I	GACNNNNNGTC	1 cut(s)	1324
EarI	CTCTTC	8 cut(s)	71, 627, 687, 713, 732, 738, 1104, 2009
EciI	GGCGGA	6 cut(s)	205, 255, 261, 445, 507, 821
Ecl136II	GAGCTC	1 cut(s)	2196
Eco130I	CCWWGG	1 cut(s)	1329
Eco147I	AGGCCT	1 cut(s)	2055
Eco24I	GRGCYC	1 cut(s)	2198
Eco31I	GGTCTC	2 cut(s)	46, 1439
Eco47I	GGWCC	4 cut(s)	185, 491, 825, 2166
Eco53kI	GAGCTC	1 cut(s)	2196
Eco57I	CTGAAG	3 cut(s)	863, 1281, 2042
Eco88I	CYCGRG	2 cut(s)	323, 818
EcoICRI	GAGCTC	1 cut(s)	2196
EcoO109I	RGGNCCY	1 cut(s)	1612
EcoRI	GAATTC	1 cut(s)	1689
EcoRII	CCWGG	1 cut(s)	168
EcoT14I	CCWWGG	1 cut(s)	1329
EcoT38I	GRGCYC	1 cut(s)	2198
EgeI	GGCGCC	2 cut(s)	148, 786
EheI	GGCGCC	2 cut(s)	148, 786
ErhI	CCWWGG	1 cut(s)	1329
Esp3I	CGTCTC	2 cut(s)	88, 1359
FaeI	CATG	9 cut(s)	73, 322, 944, 1050, 1324, 1333, 1445, 1526, 1733
FalI	AAGNNNNNCTT	2 cut(s)	1082, 1114
FaqI	GGGAC	4 cut(s)	581, 886, 1482, 1725
FatI	CATG	9 cut(s)	69, 318, 940, 1046, 1320, 1329, 1441, 1522, 1729
FauI	CCCGC	5 cut(s)	53, 241, 246, 853, 1880
FauNDI	CATATG	1 cut(s)	2041
FbaI	TGATCA	2 cut(s)	1015, 1732
FokI	GGATG	6 cut(s)	500, 746, 1094, 1106, 1420, 1628
FriOI	GRGCYC	1 cut(s)	2198
FspBI	CTAG	3 cut(s)	282, 1026, 2051
GlaI	GCGC	5 cut(s)	148, 308, 310, 786, 1529
GsaI	CCCAGC	1 cut(s)	199
HaeII	RGCGCY	2 cut(s)	150, 788
HgaI	GACGC	2 cut(s)	625, 635
HhaI	GCGC	5 cut(s)	149, 309, 311, 787, 1530
Hin1I	GRCGYC	3 cut(s)	147, 627, 785
Hin1II	CATG	9 cut(s)	73, 322, 944, 1050, 1324, 1333, 1445, 1526, 1733
Hin6I	GCGC	5 cut(s)	147, 307, 309, 785, 1528
HinP1I	GCGC	5 cut(s)	147, 307, 309, 785, 1528
HincII	GTYRAC	2 cut(s)	1318, 1592
HindII	GTYRAC	2 cut(s)	1318, 1592
HindIII	AAGCTT	1 cut(s)	1580
HinfI	GANTC	5 cut(s)	675, 1051, 1334, 1588, 1713
HphI	GGTGA	7 cut(s)	418, 1042, 1199, 1249, 1430, 2074, 2166
Hpy166II	GTNNAC	5 cut(s)	494, 652, 828, 1318, 1592
Hpy188I	TCNGA	6 cut(s)	487, 717, 931, 1261, 2125, 2146
Hpy188III	TCNNGA	8 cut(s)	25, 70, 566, 679, 1739, 1751, 1928, 2169
Hpy8I	GTNNAC	5 cut(s)	494, 652, 828, 1318, 1592
Hpy99I	CGWCG	4 cut(s)	616, 619, 629, 659
HpyCH4III	ACNGT	6 cut(s)	877, 1342, 1374, 1542, 1622, 1887
HpyCH4V	TGCA	9 cut(s)	9, 51, 889, 1300, 1324, 1555, 1763, 1793, 1982
HpyF3I	CTNAG	3 cut(s)	592, 1472, 2197
Hsp92I	GRCGYC	3 cut(s)	147, 627, 785
Hsp92II	CATG	9 cut(s)	73, 322, 944, 1050, 1324, 1333, 1445, 1526, 1733
HspAI	GCGC	5 cut(s)	147, 307, 309, 785, 1528
KasI	GGCGCC	2 cut(s)	146, 784
Kpn2I	TCCGGA	1 cut(s)	1927
KroI	GCCGGC	1 cut(s)	607
KroNI	GCCGGC	1 cut(s)	609
Ksp22I	TGATCA	2 cut(s)	1015, 1732
Kzo9I	GATC	9 cut(s)	21, 55, 327, 475, 1015, 1433, 1732, 1809, 2171
LguI	GCTCTTC	2 cut(s)	71, 1104
LmnI	GCTCC	7 cut(s)	282, 299, 435, 441, 520, 901, 978
Lsp1109I	GCAGC	5 cut(s)	35, 456, 1295, 1774, 1777
LweI	GCATC	2 cut(s)	571, 1023
MaeI	CTAG	3 cut(s)	282, 1026, 2051
MaeIII	GTNAC	1 cut(s)	92
MalI	GATC	9 cut(s)	23, 57, 329, 477, 1017, 1435, 1734, 1811, 2173
MbiI	CCGCTC	1 cut(s)	277
MboI	GATC	9 cut(s)	21, 55, 327, 475, 1015, 1433, 1732, 1809, 2171
MhlI	GDGCHC	6 cut(s)	183, 819, 940, 1116, 1518, 2198
MluCI	AATT	9 cut(s)	202, 481, 880, 988, 1142, 1199, 1413, 1689, 1827
Mly113I	GGCGCC	2 cut(s)	147, 785
MlyI	GAGTC	3 cut(s)	684, 1597, 1707
MmeI	TCCRAC	4 cut(s)	684, 939, 1461, 2103
MroI	TCCGGA	1 cut(s)	1927
MroNI	GCCGGC	1 cut(s)	607
MseI	TTAA	5 cut(s)	155, 1628, 1635, 1830, 2088
MslI	CAYNNNNRTG	2 cut(s)	1509, 1521
MspA1I	CMGCKG	1 cut(s)	48
MspCI	CTTAAG	1 cut(s)	154
MspR9I	CCNGG	6 cut(s)	170, 449, 819, 820, 970, 1858
MvaI	CCWGG	1 cut(s)	170
MvnI	CGCG	1 cut(s)	309
NaeI	GCCGGC	1 cut(s)	609
NarI	GGCGCC	2 cut(s)	147, 785
NciI	CCSGG	5 cut(s)	449, 819, 820, 970, 1858
NcoI	CCATGG	1 cut(s)	1329
NdeI	CATATG	1 cut(s)	2041
NdeII	GATC	9 cut(s)	21, 55, 327, 475, 1015, 1433, 1732, 1809, 2171
NgoMIV	GCCGGC	1 cut(s)	607
NlaIII	CATG	9 cut(s)	73, 322, 944, 1050, 1324, 1333, 1445, 1526, 1733
NmeAIII	GCCGAG	1 cut(s)	204
NspI	RCATGY	2 cut(s)	322, 1324
NspV	TTCGAA	1 cut(s)	761
OliI	CACNNNNGTG	1 cut(s)	1509
PaeI	GCATGC	1 cut(s)	322
PagI	TCATGA	1 cut(s)	69
PasI	CCCWGGG	1 cut(s)	169
PauI	GCGCGC	1 cut(s)	307
PceI	AGGCCT	1 cut(s)	2055
PciSI	GCTCTTC	2 cut(s)	71, 1104
PcsI	WCGNNNNNNNCGW	4 cut(s)	171, 390, 548, 1060
PdiI	GCCGGC	1 cut(s)	609
PfeI	GAWTC	2 cut(s)	1051, 1334
PleI	GAGTC	3 cut(s)	683, 1596, 1707
PluTI	GGCGCC	2 cut(s)	150, 788
PpsI	GAGTC	3 cut(s)	683, 1596, 1707
PshAI	GACNNNNGTC	1 cut(s)	711
Psp124BI	GAGCTC	1 cut(s)	2198
Psp6I	CCWGG	1 cut(s)	168
PspFI	CCCAGC	1 cut(s)	195
PspGI	CCWGG	1 cut(s)	168
PspPI	GGNCC	8 cut(s)	185, 227, 491, 825, 1612, 1698, 1949, 2166
PteI	GCGCGC	1 cut(s)	307
RsaI	GTAC	6 cut(s)	653, 1208, 1379, 1604, 1901, 2153
RsaNI	GTAC	6 cut(s)	652, 1207, 1378, 1603, 1900, 2152
RseI	CAYNNNNRTG	2 cut(s)	1509, 1521
SacI	GAGCTC	1 cut(s)	2198
SapI	GCTCTTC	2 cut(s)	71, 1104
SaqAI	TTAA	5 cut(s)	155, 1628, 1635, 1830, 2088
Sau3AI	GATC	9 cut(s)	21, 55, 327, 475, 1015, 1433, 1732, 1809, 2171
Sau96I	GGNCC	8 cut(s)	185, 227, 491, 825, 1612, 1698, 1949, 2166
SchI	GAGTC	3 cut(s)	684, 1597, 1707
ScrFI	CCNGG	6 cut(s)	170, 449, 819, 820, 970, 1858
SduI	GDGCHC	6 cut(s)	183, 819, 940, 1116, 1518, 2198
SfaNI	GCATC	2 cut(s)	571, 1023
SfoI	GGCGCC	2 cut(s)	148, 786
SfuI	TTCGAA	1 cut(s)	761
SgrAI	CRCCGGYG	1 cut(s)	143
SinI	GGWCC	4 cut(s)	185, 491, 825, 2166
SmaI	CCCGGG	1 cut(s)	820
SmiMI	CAYNNNNRTG	2 cut(s)	1509, 1521
SmlI	CTYRAG	5 cut(s)	154, 424, 920, 1739, 2161
SmoI	CTYRAG	5 cut(s)	154, 424, 920, 1739, 2161
SphI	GCATGC	1 cut(s)	322
Sse9I	AATT	9 cut(s)	202, 481, 880, 988, 1142, 1199, 1413, 1689, 1827
SseBI	AGGCCT	1 cut(s)	2055
SspDI	GGCGCC	2 cut(s)	146, 784
SspI	AATATT	1 cut(s)	1459
SspMI	CTAG	3 cut(s)	282, 1026, 2051
SstI	GAGCTC	1 cut(s)	2198
StuI	AGGCCT	1 cut(s)	2055
StyD4I	CCNGG	6 cut(s)	168, 447, 817, 818, 968, 1856
StyI	CCWWGG	1 cut(s)	1329
TaaI	ACNGT	6 cut(s)	877, 1342, 1374, 1542, 1622, 1887
TaqII	GACCGA	2 cut(s)	173, 1044
TasI	AATT	9 cut(s)	202, 481, 880, 988, 1142, 1199, 1413, 1689, 1827
TatI	WGTACW	2 cut(s)	1602, 2151
TfiI	GAWTC	2 cut(s)	1051, 1334
Tru1I	TTAA	5 cut(s)	155, 1628, 1635, 1830, 2088
Tru9I	TTAA	5 cut(s)	155, 1628, 1635, 1830, 2088
TscAI	CASTG	2 cut(s)	600, 835
TseI	GCWGC	6 cut(s)	6, 48, 444, 1283, 1787, 1790
TspDTI	ATGAA	8 cut(s)	58, 86, 495, 750, 1188, 1211, 1850, 2058
TspMI	CCCGGG	1 cut(s)	818
TspRI	CASTG	2 cut(s)	600, 835
Vha464I	CTTAAG	1 cut(s)	154
VpaK11BI	GGWCC	4 cut(s)	185, 491, 825, 2166
XapI	RAATTY	3 cut(s)	880, 1199, 1689
XceI	RCATGY	2 cut(s)	322, 1324
XmaI	CCCGGG	1 cut(s)	818
XspI	CTAG	3 cut(s)	282, 1026, 2051

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.