Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0008287

Physical Location & Seq

Genomic Coordinates Reverse (-)

60542017 .. 60546208

Gene Structure 4192 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG416800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGGGGTGCACCCAATCCAAGATCGAGAACGAAGAAGCCGTCTCGCGGTGCAAGGATCGGAAGCAGTTCATGAAAGACGCCGTGTCGCATCGGAACGCCTTCGCCGCCGCTCACTCCTCTTACGCTATCTACTTGAAGAACACTGGGGCCGCGTTGAGCGACTACGCCCAAGGCGAGGTGGCCCAGCACCCGCCCCAGCTCGCACAGGCCCTCCAGTCCAATTTGGTTTCTGTTCCGCCTGTTGCGGCGGGGGCTACGTTTGACCCTTCTCTTCCTCCTCCGCCTCCGCCGCTTCCGAATTTCACCGCCGCGCCGCTCCAGCGGGCTGCCAGCATGCCCGAGATCAAGCCCGACCCCAAGGCCCGGTCCAAGCCCAAGCCGATTATCGAGGAGGGGGACGAGGATGAGGAGATGGAGAATACCGAGAGCTTGAGGGTGAGGACCAGGAGGAAGAGCAACAGAGGGGTTGTGCAGAACAACGAAGAAGAAGAAGAAGACGAATTTCCCGACGGACAGCCTCCTCCGTCGCCGTCGCCGCCTCCGCCTCGGTCGGTGGAGAGCCAGACGGTGCCGCCTCTGCCGCAGCATCGGGACACGCCTTACGATTACTTCTTCTCCGTCGACATGACGGCGCCCTCGCTGGCGGTGCCGGAGGAGCCCATCTTGGGGAAGGAGGAGGAGATTCAGAAGAAGAAGGTGTTCGACGAAAGGCCCAAGAGAGTGGAAGAGCCAGTGGTGGAGCTGAAGAGGAGTCCGAAATTGGAGGAAGAGGTGGTGGTGACGGTGCCGCCTCCTCCGCCGCCGGAGGTTGTGGTGGAGCCGGCTGTGAAGACCGTGAAGAAGGTGAAGCAGGTGGTCCCAAAAGTGGGTGTTAATTTGTTGAAGGTATTTGCGGAGATTGATGACCATTTTCTCAAGGCTTCTGAGAGTGCCCATGAGGTTTCTAAGATGTTGGAGGCTACCCGGCTCCACTATCACTCTAATTTTGCTGATAATCGGGGGCATATTGACCACTCTGCTAGGGTGATGCGTGTTATTACATGGAATCGCTCTTTTAAAGGAATTCCAAATTTTGATGATGGCGGCAAGGATGACTTCGACTCAGAAGAGCATGAAACTCATGCCACGGTCTTGGATAAATTGCTGGCATGGGAGAAAAAGCTATATGATGAAGTCAAGGCAGGTGAGCTCATGAAATTTGAGTACCAAAAGAAGGTCGCCTCGCTGAACAAGCTAAAGAAAAGGAGTACTAACTCAGAAGCATTGGAGAAATCAAAAGCAGCAGTGAGTCATCTGCATACAAGATACATAGTTGACATGCAGTCCATGGACTCAACAGTATCAGAGATAAACTCTTTGCGAGATGACCAGTTATATCCAAAACTTGTTCAGCTTGTTGCAGGGATGGCTACCATGTGGGAAGCCATGCGATATCACCACGAGAGCCAGTCAAAGATTGTGACTGCCCTCTGGTCTTTTGACATCTCCCAATGTCCCAAGTTTACAACCGACCACCATCATGAGCGCACTGTCCAATTGTGGTATGTGGTGCAAGAGTGGCACTCACAGTTTGTGAAGCTTGTGAGTAACCAGAAGGCGTATGTAAAGGCCCTGAGGAATTGGTTGAAACTTAATCTCATCCCTATTGAGAGCAACCTAAAGGAGAAAGTTTCTTCTCCACCAAGAATTCAGAATCCTCCTATTCAAGGCCTACTCCTTGAGTGGAACGATCATCTAGAGAAGCTTCCAGATGATGTTGCGAGAACTGCTATACACAACTTTGCTGGTATAATACATACTATAATGCTGAAGCAGGAGGAAGAAATGAAAATGAAGGAAAAATGTGAAGATTCCAGGAAAGAACTTGACCGCAAGCAGAGGCAATTTGAAGATTGGTACCATAAATATATGAATAAGAACATACCGGACGAAGCAGATCCGGAGAGACCAGAAAGCATTGTTCGCAATGATGTTGTTGCAGAAAAGCAGTTTAATGTGGAAACAGTCAAGAAGAGGTTAGAAGACGAGGATGAAGCCTATGGAAGACTGTGCATTCAGGTGAGAGAGAAGTCTATAACAAGTCTTAAAACTGGCTTGCCAGAACTCTTTAGGGCATTGTCGGATTTCGCTTTTTCTTGTTCAGAAATGTACATACACTTGAGGTCCAGATCAGCTCACCATCAAAGTGAGAGCTCAGCAAGAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

735

Amino Acids

84.0

Weight (kDa)

6.03

Isoelectric Point (pI)

59.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 59	1.9e-24	Protein of unknown function (DUF630)
DUF632	PF04782	293 - 599	1.8e-107	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008287)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52320 AT1G52320 AT1G52320 AT1G52320 AT1G52320
fragaria_vesca	FvH4_6g31260 FvH4_6g31260 FvH4_6g31260
malus_domestica	MD09G1212400.v1.1 MD17G1194400.v1.1
prunus_persica	Prupe.3G070400_v2.0.a1 Prupe.3G070400_v2.0.a1
pyrus_communis	pycom17g20020
rosa_chinensis	RchiOBHm_Chr2g0138001
rosa_laevigata	RLG00000019695
rosa_multiflora	Rmu_sc0002170.1_g000054
rosa_roxburghii	Rroxscaffold_2G00106600
rosa_rugosa	Rorug02G0348600
rosa_samantha	Rh2AG395000 Rh2BG402200 Rh2CG381600 Rh2DG416800
rosa_wichuraiana	Rw2G032300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	841, 1172
Acc36I	ACCTGC	2 cut(s)	841, 1172
Acc65I	GGTACC	1 cut(s)	1896
AccB1I	GGYRCC	5 cut(s)	568, 631, 646, 784, 1896
AccBSI	CCGCTC	2 cut(s)	110, 316
AccI	GTMKAC	1 cut(s)	621
AccII	CGCG	3 cut(s)	46, 152, 311
AccIII	TCCGGA	1 cut(s)	1939
AclWI	GGATC	2 cut(s)	63, 1931
AcsI	RAATTY	6 cut(s)	298, 500, 1062, 1069, 1196, 1686
AcuI	CTGAAG	2 cut(s)	764, 1829
AcyI	GRCGYC	2 cut(s)	78, 632
AfaI	GTAC	4 cut(s)	1205, 1249, 1898, 2150
AfiI	CCNNNNNNNGG	9 cut(s)	45, 175, 363, 665, 666, 865, 866, 1213, 1706
AgsI	TTSAA	5 cut(s)	136, 883, 1627, 1706, 1889
AhdI	GACNNNNNGTC	2 cut(s)	82, 1321
AjnI	CCWGG	2 cut(s)	443, 1853
Alw21I	GWGCWC	3 cut(s)	11, 1191, 2195
Alw26I	GTCTC	2 cut(s)	46, 1939
Alw44I	GTGCAC	1 cut(s)	7
AlwI	GGATC	2 cut(s)	63, 1931
Ama87I	CYCGRG	1 cut(s)	338
Aor13HI	TCCGGA	1 cut(s)	1939
AoxI	GGCC	7 cut(s)	147, 180, 207, 360, 710, 1608, 1708
ApaLI	GTGCAC	1 cut(s)	7
ApeKI	GCWGC	3 cut(s)	326, 583, 1280
ApoI	RAATTY	6 cut(s)	298, 500, 1062, 1069, 1196, 1686
ArsI	GACNNNNNNTTYG	2 cut(s)	24, 56
Asp700I	GAANNNNTTC	3 cut(s)	65, 98, 698
Asp718I	GGTACC	1 cut(s)	1896
AspLEI	GCGC	3 cut(s)	313, 634, 1527
AsuC2I	CCSGG	2 cut(s)	364, 964
AsuHPI	GGTGA	9 cut(s)	295, 448, 790, 856, 1036, 1196, 1427, 2071, 2168
AvaI	CYCGRG	1 cut(s)	338
AvaII	GGWCC	4 cut(s)	366, 441, 856, 2163
AxyI	CCTNAGG	1 cut(s)	1613
BaeGI	GKGCMC	2 cut(s)	11, 934
BanI	GGYRCC	5 cut(s)	568, 631, 646, 784, 1896
BanII	GRGCYC	3 cut(s)	660, 1191, 2195
BauI	CACGAG	1 cut(s)	1439
BbsI	GAAGAC	4 cut(s)	501, 836, 2028, 2050
Bbv12I	GWGCWC	3 cut(s)	11, 1191, 2195
BbvI	GCAGC	3 cut(s)	313, 595, 1292
BccI	CCATC	6 cut(s)	406, 668, 1073, 1399, 1524, 2187
BceAI	ACGGC	4 cut(s)	23, 65, 514, 645
BciT130I	CCWGG	2 cut(s)	445, 1855
BcnI	CCSGG	2 cut(s)	364, 964
BcoDI	GTCTC	2 cut(s)	46, 1939
BfaI	CTAG	2 cut(s)	1020, 1736
BfoI	RGCGCY	1 cut(s)	635
BfuAI	ACCTGC	2 cut(s)	841, 1172
BlpI	GCTNAGC	1 cut(s)	2194
BmcAI	AGTACT	1 cut(s)	1249
Bme1390I	CCNGG	4 cut(s)	364, 445, 964, 1855
Bme18I	GGWCC	4 cut(s)	366, 441, 856, 2163
BmeRI	GACNNNNNGTC	2 cut(s)	82, 1321
BmeT110I	CYCGRG	1 cut(s)	338
BmrFI	CCNGG	4 cut(s)	364, 445, 964, 1855
BmrI	ACTGGG	1 cut(s)	153
BmsI	GCATC	3 cut(s)	97, 595, 1017
BmuI	ACTGGG	1 cut(s)	153
BpiI	GAAGAC	4 cut(s)	501, 836, 2028, 2050
BplI	GAGNNNNNCTC	4 cut(s)	1337, 1369, 1547, 1579
BpmI	CTGGAG	2 cut(s)	197, 302
Bpu1102I	GCTNAGC	1 cut(s)	2194
BpuEI	CTTGAG	4 cut(s)	451, 899, 1739, 2179
BpuMI	CCSGG	2 cut(s)	364, 964
BsaHI	GRCGYC	2 cut(s)	78, 632
BsaI	GGTCTC	1 cut(s)	1939
BsaJI	CCNNGG	5 cut(s)	169, 357, 545, 1125, 1326
BsaWI	WCCGGW	2 cut(s)	1924, 1939
BsaXI	ACNNNNNCTCC	4 cut(s)	195, 225, 599, 629
Bsc4I	CCNNNNNNNGG	9 cut(s)	45, 175, 363, 665, 666, 865, 866, 1213, 1706
Bse118I	RCCGGY	1 cut(s)	820
Bse1I	ACTGG	6 cut(s)	148, 214, 731, 1369, 1447, 2095
Bse21I	CCTNAGG	1 cut(s)	1613
Bse3DI	GCAATG	1 cut(s)	1972
BseAI	TCCGGA	1 cut(s)	1939
BseBI	CCWGG	2 cut(s)	445, 1855
BseDI	CCNNGG	5 cut(s)	169, 357, 545, 1125, 1326
BseGI	GGATG	5 cut(s)	409, 1096, 1410, 1638, 2035
BseLI	CCNNNNNNNGG	9 cut(s)	45, 175, 363, 665, 666, 865, 866, 1213, 1706
BseMI	GCAATG	1 cut(s)	1972
BseMII	CTCAG	5 cut(s)	915, 1116, 1269, 1604, 2208
BseNI	ACTGG	6 cut(s)	148, 214, 731, 1369, 1447, 2095
BseSI	GKGCMC	2 cut(s)	11, 934
BseXI	GCAGC	3 cut(s)	313, 595, 1292
BseYI	CCCAGC	2 cut(s)	183, 195
BsgI	GTGCAG	1 cut(s)	491
Bsh1236I	CGCG	3 cut(s)	46, 152, 311
Bsh1285I	CGRYCG	1 cut(s)	551
BshFI	GGCC	7 cut(s)	149, 182, 209, 362, 712, 1610, 1710
BshNI	GGYRCC	5 cut(s)	568, 631, 646, 784, 1896
BsiEI	CGRYCG	1 cut(s)	551
BsiHKAI	GWGCWC	3 cut(s)	11, 1191, 2195
BsiHKCI	CYCGRG	1 cut(s)	338
BsiSI	CCGG	7 cut(s)	364, 650, 803, 821, 964, 1925, 1940
BslFI	GGGAC	4 cut(s)	410, 605, 842, 1479
BslI	CCNNNNNNNGG	9 cut(s)	45, 175, 363, 665, 666, 865, 866, 1213, 1706
BsmAI	GTCTC	2 cut(s)	46, 1939
BsmBI	CGTCTC	1 cut(s)	46
BsmFI	GGGAC	4 cut(s)	410, 605, 842, 1479
BsmI	GAATGC	1 cut(s)	2052
BsnI	GGCC	7 cut(s)	149, 182, 209, 362, 712, 1610, 1710
Bso31I	GGTCTC	1 cut(s)	1939
BsoBI	CYCGRG	1 cut(s)	338
Bsp1286I	GDGCHC	5 cut(s)	11, 660, 934, 1191, 2195
Bsp13I	TCCGGA	1 cut(s)	1939
Bsp1407I	TGTACA	1 cut(s)	2148
Bsp143I	GATC	6 cut(s)	21, 55, 342, 1729, 1936, 2168
Bsp1720I	GCTNAGC	1 cut(s)	2194
Bsp19I	CCATGG	1 cut(s)	1326
BspANI	GGCC	7 cut(s)	149, 182, 209, 362, 712, 1610, 1710
BspCNI	CTCAG	5 cut(s)	916, 1115, 1268, 1605, 2207
BspEI	TCCGGA	1 cut(s)	1939
BspFNI	CGCG	3 cut(s)	46, 152, 311
BspHI	TCATGA	3 cut(s)	69, 1191, 1519
BspMI	ACCTGC	2 cut(s)	841, 1172
BspPI	GGATC	2 cut(s)	63, 1931
BspQI	GCTCTTC	3 cut(s)	446, 720, 1101
BspT107I	GGYRCC	5 cut(s)	568, 631, 646, 784, 1896
BspTNI	GGTCTC	1 cut(s)	1939
BsrBI	CCGCTC	2 cut(s)	110, 316
BsrDI	GCAATG	1 cut(s)	1972
BsrFI	RCCGGY	1 cut(s)	820
BsrGI	TGTACA	1 cut(s)	2148
BsrI	ACTGG	6 cut(s)	148, 214, 731, 1369, 1447, 2095
BssAI	RCCGGY	1 cut(s)	820
BssECI	CCNNGG	5 cut(s)	169, 357, 545, 1125, 1326
BssMI	GATC	6 cut(s)	21, 55, 342, 1729, 1936, 2168
BssNI	GRCGYC	2 cut(s)	78, 632
BssSI	CACGAG	1 cut(s)	1439
BssT1I	CCWWGG	3 cut(s)	169, 357, 1326
Bst2BI	CACGAG	1 cut(s)	1439
Bst2UI	CCWGG	2 cut(s)	445, 1855
Bst4CI	ACNGT	9 cut(s)	568, 784, 835, 1129, 1339, 1531, 1569, 2005, 2049
Bst6I	CTCTTC	7 cut(s)	276, 446, 720, 740, 762, 1101, 2006
BstACI	GRCGYC	2 cut(s)	78, 632
BstAUI	TGTACA	1 cut(s)	2148
BstC8I	GCNNGC	9 cut(s)	201, 324, 331, 335, 642, 822, 1146, 1874, 2096
BstDEI	CTNAG	6 cut(s)	924, 945, 1102, 1255, 1613, 2194
BstDSI	CCRYGG	2 cut(s)	1125, 1326
BstENI	CCTNNNNNAGG	1 cut(s)	1704
BstF5I	GGATG	5 cut(s)	409, 1096, 1410, 1638, 2035
BstFNI	CGCG	3 cut(s)	46, 152, 311
BstH2I	RGCGCY	1 cut(s)	635
BstHHI	GCGC	3 cut(s)	313, 634, 1527
BstKTI	GATC	6 cut(s)	24, 58, 345, 1732, 1939, 2171
BstMAI	GTCTC	2 cut(s)	46, 1939
BstMBI	GATC	6 cut(s)	21, 55, 342, 1729, 1936, 2168
BstMCI	CGRYCG	1 cut(s)	551
BstNI	CCWGG	2 cut(s)	445, 1855
BstNSI	RCATGY	2 cut(s)	337, 1321
BstSCI	CCNGG	4 cut(s)	362, 443, 962, 1853
BstSLI	GKGCMC	2 cut(s)	11, 934
BstUI	CGCG	3 cut(s)	46, 152, 311
BstV1I	GCAGC	3 cut(s)	313, 595, 1292
BstV2I	GAAGAC	4 cut(s)	501, 836, 2028, 2050
BstX2I	RGATCY	1 cut(s)	1936
BstXI	CCANNNNNNTGG	2 cut(s)	721, 1132
BstYI	RGATCY	1 cut(s)	1936
Bsu36I	CCTNAGG	1 cut(s)	1613
BsuRI	GGCC	7 cut(s)	149, 182, 209, 362, 712, 1610, 1710
BtgI	CCRYGG	2 cut(s)	1125, 1326
BtsCI	GGATG	5 cut(s)	409, 1096, 1410, 1638, 2035
BtsI	GCAGTG	1 cut(s)	1290
BtsIMutI	CAGTG	4 cut(s)	141, 738, 1290, 1527
BveI	ACCTGC	2 cut(s)	841, 1172
Cac8I	GCNNGC	9 cut(s)	201, 324, 331, 335, 642, 822, 1146, 1874, 2096
CciI	TCATGA	3 cut(s)	69, 1191, 1519
CfoI	GCGC	3 cut(s)	313, 634, 1527
Cfr10I	RCCGGY	1 cut(s)	820
CseI	GACGC	1 cut(s)	86
Csp6I	GTAC	4 cut(s)	1204, 1248, 1897, 2149
CviQI	GTAC	4 cut(s)	1204, 1248, 1897, 2149
DdeI	CTNAG	6 cut(s)	924, 945, 1102, 1255, 1613, 2194
DinI	GGCGCC	1 cut(s)	633
DpnI	GATC	6 cut(s)	23, 57, 344, 1731, 1938, 2170
DpnII	GATC	6 cut(s)	21, 55, 342, 1729, 1936, 2168
DraI	TTTAAA	1 cut(s)	1057
DriI	GACNNNNNGTC	2 cut(s)	82, 1321
Eam1104I	CTCTTC	7 cut(s)	276, 446, 720, 740, 762, 1101, 2006
Eam1105I	GACNNNNNGTC	2 cut(s)	82, 1321
EarI	CTCTTC	7 cut(s)	276, 446, 720, 740, 762, 1101, 2006
EciI	GGCGGA	5 cut(s)	225, 270, 276, 531, 786
Ecl136II	GAGCTC	2 cut(s)	1189, 2193
Eco130I	CCWWGG	3 cut(s)	169, 357, 1326
Eco147I	AGGCCT	1 cut(s)	1710
Eco24I	GRGCYC	3 cut(s)	660, 1191, 2195
Eco31I	GGTCTC	1 cut(s)	1939
Eco32I	GATATC	1 cut(s)	1433
Eco47I	GGWCC	4 cut(s)	366, 441, 856, 2163
Eco53kI	GAGCTC	2 cut(s)	1189, 2193
Eco57I	CTGAAG	2 cut(s)	764, 1829
Eco81I	CCTNAGG	1 cut(s)	1613
Eco88I	CYCGRG	1 cut(s)	338
EcoICRI	GAGCTC	2 cut(s)	1189, 2193
EcoNI	CCTNNNNNAGG	1 cut(s)	1704
EcoO109I	RGGNCCY	2 cut(s)	208, 1609
EcoRI	GAATTC	2 cut(s)	1062, 1686
EcoRII	CCWGG	2 cut(s)	443, 1853
EcoRV	GATATC	1 cut(s)	1433
EcoT14I	CCWWGG	3 cut(s)	169, 357, 1326
EcoT38I	GRGCYC	3 cut(s)	660, 1191, 2195
EgeI	GGCGCC	1 cut(s)	633
EheI	GGCGCC	1 cut(s)	633
ErhI	CCWWGG	3 cut(s)	169, 357, 1326
Esp3I	CGTCTC	1 cut(s)	46
FalI	AAGNNNNNCTT	2 cut(s)	1079, 1111
FaqI	GGGAC	4 cut(s)	410, 605, 842, 1479
FauI	CCCGC	3 cut(s)	198, 241, 315
FblI	GTMKAC	1 cut(s)	621
FokI	GGATG	5 cut(s)	416, 1103, 1417, 1625, 2042
FriOI	GRGCYC	3 cut(s)	660, 1191, 2195
FspBI	CTAG	2 cut(s)	1020, 1736
GlaI	GCGC	3 cut(s)	312, 633, 1526
GsaI	CCCAGC	2 cut(s)	187, 199
GsuI	CTGGAG	2 cut(s)	197, 302
HaeII	RGCGCY	1 cut(s)	635
HaeIII	GGCC	7 cut(s)	149, 182, 209, 362, 712, 1610, 1710
HapII	CCGG	7 cut(s)	364, 650, 803, 821, 964, 1925, 1940
HgaI	GACGC	1 cut(s)	86
HhaI	GCGC	3 cut(s)	313, 634, 1527
Hin1I	GRCGYC	2 cut(s)	78, 632
Hin6I	GCGC	3 cut(s)	311, 632, 1525
HinP1I	GCGC	3 cut(s)	311, 632, 1525
HincII	GTYRAC	2 cut(s)	622, 1315
HindII	GTYRAC	2 cut(s)	622, 1315
HindIII	AAGCTT	2 cut(s)	1577, 1742
HinfI	GANTC	8 cut(s)	682, 751, 1045, 1100, 1288, 1331, 1693, 1850
HpaII	CCGG	7 cut(s)	364, 650, 803, 821, 964, 1925, 1940
HphI	GGTGA	9 cut(s)	295, 448, 790, 856, 1036, 1196, 1427, 2071, 2168
Hpy166II	GTNNAC	4 cut(s)	9, 622, 1315, 1503
Hpy8I	GTNNAC	4 cut(s)	9, 622, 1315, 1503
Hpy99I	CGWCG	5 cut(s)	512, 529, 535, 623, 707
HpyAV	CCTTC	9 cut(s)	109, 276, 664, 688, 835, 877, 1207, 1588, 1828
HpyCH4III	ACNGT	9 cut(s)	568, 784, 835, 1129, 1339, 1531, 1569, 2005, 2049
HpyCH4IV	ACGT	1 cut(s)	257
HpyCH4V	TGCA	9 cut(s)	9, 51, 472, 1297, 1321, 1400, 1552, 1979, 2052
HpyF3I	CTNAG	6 cut(s)	924, 945, 1102, 1255, 1613, 2194
HpySE526I	ACGT	1 cut(s)	257
Hsp92I	GRCGYC	2 cut(s)	78, 632
HspAI	GCGC	3 cut(s)	311, 632, 1525
KasI	GGCGCC	1 cut(s)	631
Kpn2I	TCCGGA	1 cut(s)	1939
KpnI	GGTACC	1 cut(s)	1900
KroI	GCCGGC	1 cut(s)	820
KroNI	GCCGGC	1 cut(s)	822
Kzo9I	GATC	6 cut(s)	21, 55, 342, 1729, 1936, 2168
LguI	GCTCTTC	3 cut(s)	446, 720, 1101
LmnI	GCTCC	5 cut(s)	321, 655, 739, 817, 972
Lsp1109I	GCAGC	3 cut(s)	313, 595, 1292
LweI	GCATC	3 cut(s)	97, 595, 1017
MaeI	CTAG	2 cut(s)	1020, 1736
MaeII	ACGT	1 cut(s)	257
MaeIII	GTNAC	3 cut(s)	778, 1459, 1586
MalI	GATC	6 cut(s)	23, 57, 344, 1731, 1938, 2170
MbiI	CCGCTC	2 cut(s)	110, 316
MboI	GATC	6 cut(s)	21, 55, 342, 1729, 1936, 2168
MfeI	CAATTG	1 cut(s)	1535
MflI	RGATCY	1 cut(s)	1936
MhlI	GDGCHC	5 cut(s)	11, 660, 934, 1191, 2195
Mly113I	GGCGCC	1 cut(s)	632
MlyI	GAGTC	4 cut(s)	760, 1094, 1297, 1325
MmeI	TCCRAC	2 cut(s)	933, 2100
MroI	TCCGGA	1 cut(s)	1939
MroNI	GCCGGC	1 cut(s)	820
MroXI	GAANNNNTTC	3 cut(s)	65, 98, 698
MseI	TTAA	5 cut(s)	873, 1056, 1632, 1992, 2085
MslI	CAYNNNNRTG	3 cut(s)	1518, 2057, 2184
MspA1I	CMGCKG	1 cut(s)	322
MspI	CCGG	7 cut(s)	364, 650, 803, 821, 964, 1925, 1940
MspR9I	CCNGG	4 cut(s)	364, 445, 964, 1855
MunI	CAATTG	1 cut(s)	1535
Mva1269I	GAATGC	1 cut(s)	2052
MvaI	CCWGG	2 cut(s)	445, 1855
MvnI	CGCG	3 cut(s)	46, 152, 311
NaeI	GCCGGC	1 cut(s)	822
NarI	GGCGCC	1 cut(s)	632
NciI	CCSGG	2 cut(s)	364, 964
NcoI	CCATGG	1 cut(s)	1326
NdeII	GATC	6 cut(s)	21, 55, 342, 1729, 1936, 2168
NgoMIV	GCCGGC	1 cut(s)	820
NmuCI	GTSAC	2 cut(s)	778, 1459
NspI	RCATGY	2 cut(s)	337, 1321
PaeI	GCATGC	1 cut(s)	337
PagI	TCATGA	3 cut(s)	69, 1191, 1519
PaqCI	CACCTGC	2 cut(s)	841, 1172
PceI	AGGCCT	1 cut(s)	1710
PciSI	GCTCTTC	3 cut(s)	446, 720, 1101
PcsI	WCGNNNNNNNCGW	3 cut(s)	36, 171, 504
PctI	GAATGC	1 cut(s)	2052
PdiI	GCCGGC	1 cut(s)	822
PdmI	GAANNNNTTC	3 cut(s)	65, 98, 698
PfeI	GAWTC	4 cut(s)	682, 1045, 1693, 1850
PfoI	TCCNGGA	1 cut(s)	1853
PleI	GAGTC	4 cut(s)	759, 1094, 1296, 1325
PluTI	GGCGCC	1 cut(s)	635
PpsI	GAGTC	4 cut(s)	759, 1094, 1296, 1325
Psp124BI	GAGCTC	2 cut(s)	1191, 2195
Psp6I	CCWGG	2 cut(s)	443, 1853
PspFI	CCCAGC	2 cut(s)	183, 195
PspGI	CCWGG	2 cut(s)	443, 1853
PsuI	RGATCY	1 cut(s)	1936
RsaI	GTAC	4 cut(s)	1205, 1249, 1898, 2150
RsaNI	GTAC	4 cut(s)	1204, 1248, 1897, 2149
RseI	CAYNNNNRTG	3 cut(s)	1518, 2057, 2184
SacI	GAGCTC	2 cut(s)	1191, 2195
SalI	GTCGAC	1 cut(s)	620
SapI	GCTCTTC	3 cut(s)	446, 720, 1101
SaqAI	TTAA	5 cut(s)	873, 1056, 1632, 1992, 2085
Sau3AI	GATC	6 cut(s)	21, 55, 342, 1729, 1936, 2168
ScaI	AGTACT	1 cut(s)	1249
SchI	GAGTC	4 cut(s)	760, 1094, 1297, 1325
ScrFI	CCNGG	4 cut(s)	364, 445, 964, 1855
SduI	GDGCHC	5 cut(s)	11, 660, 934, 1191, 2195
SfaNI	GCATC	3 cut(s)	97, 595, 1017
SfoI	GGCGCC	1 cut(s)	633
SinI	GGWCC	4 cut(s)	366, 441, 856, 2163
SmiMI	CAYNNNNRTG	3 cut(s)	1518, 2057, 2184
SmlI	CTYRAG	4 cut(s)	430, 914, 1718, 2158
SmoI	CTYRAG	4 cut(s)	430, 914, 1718, 2158
SphI	GCATGC	1 cut(s)	337
SseBI	AGGCCT	1 cut(s)	1710
SspDI	GGCGCC	1 cut(s)	631
SspMI	CTAG	2 cut(s)	1020, 1736
SstI	GAGCTC	2 cut(s)	1191, 2195
StuI	AGGCCT	1 cut(s)	1710
StyD4I	CCNGG	4 cut(s)	362, 443, 962, 1853
StyI	CCWWGG	3 cut(s)	169, 357, 1326
TaaI	ACNGT	9 cut(s)	568, 784, 835, 1129, 1339, 1531, 1569, 2005, 2049
TaiI	ACGT	1 cut(s)	260
TaqI	TCGA	5 cut(s)	24, 387, 621, 702, 1098
TaqII	GACCGA	1 cut(s)	537
TatI	WGTACW	2 cut(s)	1247, 2148
TfiI	GAWTC	4 cut(s)	682, 1045, 1693, 1850
Tru1I	TTAA	5 cut(s)	873, 1056, 1632, 1992, 2085
Tru9I	TTAA	5 cut(s)	873, 1056, 1632, 1992, 2085
TscAI	CASTG	4 cut(s)	148, 738, 1290, 1534
TseFI	GTSAC	2 cut(s)	778, 1459
TseI	GCWGC	3 cut(s)	326, 583, 1280
Tsp45I	GTSAC	2 cut(s)	778, 1459
TspDTI	ATGAA	9 cut(s)	58, 86, 1128, 1185, 1208, 1841, 1847, 1925, 2046
TspGWI	ACGGA	3 cut(s)	513, 525, 607
TspRI	CASTG	4 cut(s)	148, 738, 1290, 1534
VneI	GTGCAC	1 cut(s)	7
VpaK11BI	GGWCC	4 cut(s)	366, 441, 856, 2163
XagI	CCTNNNNNAGG	1 cut(s)	1704
XapI	RAATTY	6 cut(s)	298, 500, 1062, 1069, 1196, 1686
XbaI	TCTAGA	1 cut(s)	1735
XceI	RCATGY	2 cut(s)	337, 1321
XmiI	GTMKAC	1 cut(s)	621
XmnI	GAANNNNTTC	3 cut(s)	65, 98, 698
XspI	CTAG	2 cut(s)	1020, 1736
ZrmI	AGTACT	1 cut(s)	1249

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.