Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002170.1

Orthogroup ID

OG0008287

Physical Location & Seq

Genomic Coordinates Reverse (-)

242458 .. 246309

Gene Structure 3852 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002170.1_g000054.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2277 bp

atggggtgcacccaatccaagatcgagaacgaagaagccgtctcgcggtgcaaggatcggaagcagttcatgaaagacgccgtgtcgtatcggaacgccttcgccgccgctcactcctcttacgctatctacttgaagaacactggggccgcgttgagcgactacgcccaaggcgaggtggcccagcacccgccccagctcgcacaggccctccagtccaattcggtttctgttccgcctgttgcggcgggggctacgtttgacccttctcttcctcctccgcctccgccgcttccgaatttcaccgccgcgccgctccagcgggctgccagcatgcccgagatcaagcccgaccccaaggcccggtccaagcccaagccgattatcgaggaggaggacgaggatgaggagatggagaataccgagaccttgaggactaggagcaagagcaccagaagcaagagcaacagaggggttgtgcagaacaacgaagaagaagaagacgaatttcccgacggacagcctcctccgtcgccgtcgccgcctccgccccggtcgaacaacgaagaagaagaagacgaatttcccgacggacagcctcctccgtcgccgtcgccgtcgccgcctccgccccggtcggtggagagccagacggtgccgcctctgccgcagcatcgggacacgccttacgatttcttcttctccgtcgacgtgctggcgccctcgctggcggtgccggaggagcccatctcggggaaggaggagattcagaagaaggtgttcgacgaaaggcccaagagagtggaagagccagtggtggagctgaagaggagtccgaaattggaggaagaggtgccgcctcctccgccgccggaggcggtggtggagccggctgggaagaccgtgaagaaggggaagcaggtggtcccaaaagtgggtgttaatttgttgaaggtatttgcggagattgatgaccattttctcaaggcttctgagagtgcccatgaggtttctaagatgttggaggctacccggctccactatcactctaattttgctgataatcgggggcatattgaccactctgctagagtgatgcgtgttattacatggaatcgctcttttaaaggaattccaaattttgatgatggcggcaaggatgacttcgactcagaagagcatgaaactcatgccacggtcttggataaattgctggcatgggagaaaaagctatatgatgaagtcaaggcaggcgagctcatgaaatttgagtaccaaaagaaggtcgcctcgctgaacaagctaaagaaacggagtactaactcagaagcattggagaaatcaaaagcagcagtgagtcatctgcatacaagatacatagtcgacatgcagtccatggactcaacagtgtcagagataaactctttacgagatgaccagttatatccaaaacttgttcagcttgttgcagggatggctaccatgtgggaagccatgcgatatcaccacgagagccagtcaaagattgtgactgccctctggtcttttgacatctcccaatgtcccaagtttacaactgaccaccatcatgagcgcactgtccaattgtggtatgtggtgcaagagtggcactcacagtttgagaagcttgtgagtaaccagaagttgtatgtaaaggccctgaggaattggttgaaacttaatctcatccctattgagagcaacctaaaggagaaagtttcttctccaccaagaattcagaatcctcctattcagggcctactccttgagtggaacgattatctagagaaacttccagatgatgttgcgagaactgctatacaaaactttgctggtataatacatactataatgctgaagcaggaggaagaaatgaaaatgaaggaaaaatgtgaagattcccggaaagaacttgaccgcaagcagaggcaatttgaagattggtaccataaatatatgaataagaacataccggacgaaacagatccggagagaccagaaagcattgttcgcaatgatgttgttgcagaaaagcagtttaatgtggaaacagtcaagaagaggttagaagacgaggatgaagcctatgcaagactgtgccttcaggtgagagagaagtctataactagtcttaaaactggcttgccagaactctttagggcattgtcggatttcgctttttcttgttcagaaatgtacaaacacttgaggtccagatcagcccaccatcaaagtgagagctcagcaagacaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

758

Amino Acids

86.42

Weight (kDa)

5.74

Isoelectric Point (pI)

64.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008287)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52320 AT1G52320 AT1G52320 AT1G52320 AT1G52320
fragaria_vesca	FvH4_6g31260 FvH4_6g31260 FvH4_6g31260
malus_domestica	MD09G1212400.v1.1 MD17G1194400.v1.1
prunus_persica	Prupe.3G070400_v2.0.a1 Prupe.3G070400_v2.0.a1
pyrus_communis	pycom17g20020
rosa_chinensis	RchiOBHm_Chr2g0138001
rosa_laevigata	RLG00000019695
rosa_multiflora	Rmu_sc0002170.1_g000054
rosa_roxburghii	Rroxscaffold_2G00106600
rosa_rugosa	Rorug02G0348600
rosa_samantha	Rh2AG395000 Rh2BG402200 Rh2CG381600 Rh2DG416800
rosa_wichuraiana	Rw2G032300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	910
Acc36I	ACCTGC	1 cut(s)	910
Acc65I	GGTACC	1 cut(s)	1965
AccB1I	GGYRCC	5 cut(s)	655, 718, 733, 853, 1965
AccBSI	CCGCTC	2 cut(s)	110, 316
AccI	GTMKAC	2 cut(s)	708, 1383
AccII	CGCG	3 cut(s)	46, 152, 311
AccIII	TCCGGA	1 cut(s)	2008
AclWI	GGATC	2 cut(s)	63, 2000
AcsI	RAATTY	7 cut(s)	298, 506, 581, 1131, 1138, 1265, 1755
AcuI	CTGAAG	3 cut(s)	845, 1898, 2108
AcyI	GRCGYC	2 cut(s)	78, 719
AfaI	GTAC	4 cut(s)	1274, 1318, 1967, 2219
AgsI	TTSAA	4 cut(s)	136, 952, 1696, 1958
AhdI	GACNNNNNGTC	2 cut(s)	82, 1390
AhlI	ACTAGT	1 cut(s)	2147
AjiI	CACGTC	1 cut(s)	712
AluBI	AGCT	8 cut(s)	199, 823, 1231, 1258, 1303, 1462, 1648, 2262
AluI	AGCT	8 cut(s)	199, 823, 1231, 1258, 1303, 1462, 1648, 2262
Alw21I	GWGCWC	4 cut(s)	11, 452, 1260, 2264
Alw26I	GTCTC	3 cut(s)	46, 419, 2008
Alw44I	GTGCAC	1 cut(s)	7
AlwI	GGATC	2 cut(s)	63, 2000
Ama87I	CYCGRG	2 cut(s)	338, 751
Aor13HI	TCCGGA	1 cut(s)	2008
AoxI	GGCC	7 cut(s)	147, 180, 207, 360, 791, 1677, 1777
ApaLI	GTGCAC	1 cut(s)	7
ApeKI	GCWGC	3 cut(s)	326, 670, 1349
ApoI	RAATTY	7 cut(s)	298, 506, 581, 1131, 1138, 1265, 1755
ArsI	GACNNNNNNTTYG	2 cut(s)	24, 56
Asp700I	GAANNNNTTC	3 cut(s)	65, 98, 779
Asp718I	GGTACC	1 cut(s)	1965
AspLEI	GCGC	3 cut(s)	313, 721, 1596
AsuC2I	CCSGG	5 cut(s)	364, 553, 634, 1033, 1924
AsuHPI	GGTGA	3 cut(s)	295, 1496, 2140
AvaI	CYCGRG	2 cut(s)	338, 751
AvaII	GGWCC	3 cut(s)	366, 925, 2232
AxyI	CCTNAGG	1 cut(s)	1682
BaeGI	GKGCMC	2 cut(s)	11, 1003
BanI	GGYRCC	5 cut(s)	655, 718, 733, 853, 1965
BanII	GRGCYC	3 cut(s)	747, 1260, 2264
BauI	CACGAG	1 cut(s)	1508
BbsI	GAAGAC	4 cut(s)	507, 582, 905, 2097
Bbv12I	GWGCWC	4 cut(s)	11, 452, 1260, 2264
BbvI	GCAGC	3 cut(s)	313, 682, 1361
BccI	CCATC	6 cut(s)	406, 755, 1142, 1468, 1593, 2256
BceAI	ACGGC	5 cut(s)	23, 65, 520, 595, 601
BcnI	CCSGG	5 cut(s)	364, 553, 634, 1033, 1924
BcoDI	GTCTC	3 cut(s)	46, 419, 2008
BcuI	ACTAGT	1 cut(s)	2147
BfaI	CTAG	4 cut(s)	438, 1089, 1805, 2148
BfoI	RGCGCY	1 cut(s)	722
BfuAI	ACCTGC	1 cut(s)	910
BlpI	GCTNAGC	1 cut(s)	2263
BmcAI	AGTACT	1 cut(s)	1318
Bme1390I	CCNGG	5 cut(s)	364, 553, 634, 1033, 1924
Bme18I	GGWCC	3 cut(s)	366, 925, 2232
BmeRI	GACNNNNNGTC	2 cut(s)	82, 1390
BmeT110I	CYCGRG	2 cut(s)	338, 751
BmgBI	CACGTC	1 cut(s)	712
BmrFI	CCNGG	5 cut(s)	364, 553, 634, 1033, 1924
BmrI	ACTGGG	1 cut(s)	153
BmsI	GCATC	2 cut(s)	682, 1086
BmuI	ACTGGG	1 cut(s)	153
BpiI	GAAGAC	4 cut(s)	507, 582, 905, 2097
BplI	GAGNNNNNCTC	6 cut(s)	734, 766, 1406, 1438, 1616, 1648
BpmI	CTGGAG	2 cut(s)	197, 302
Bpu1102I	GCTNAGC	1 cut(s)	2263
BpuEI	CTTGAG	4 cut(s)	451, 968, 1808, 2248
BpuMI	CCSGG	5 cut(s)	364, 553, 634, 1033, 1924
BsaHI	GRCGYC	2 cut(s)	78, 719
BsaI	GGTCTC	2 cut(s)	419, 2008
BsaJI	CCNNGG	6 cut(s)	169, 357, 551, 632, 1194, 1395
BsaWI	WCCGGW	2 cut(s)	1993, 2008
BsaXI	ACNNNNNCTCC	2 cut(s)	195, 225
Bse118I	RCCGGY	1 cut(s)	889
Bse1I	ACTGG	6 cut(s)	148, 214, 812, 1438, 1516, 2164
Bse21I	CCTNAGG	1 cut(s)	1682
Bse3DI	GCAATG	1 cut(s)	2041
BseAI	TCCGGA	1 cut(s)	2008
BseDI	CCNNGG	6 cut(s)	169, 357, 551, 632, 1194, 1395
BseGI	GGATG	5 cut(s)	409, 1165, 1479, 1707, 2104
BseMI	GCAATG	1 cut(s)	2041
BseMII	CTCAG	5 cut(s)	984, 1185, 1338, 1673, 2277
BseNI	ACTGG	6 cut(s)	148, 214, 812, 1438, 1516, 2164
BseSI	GKGCMC	2 cut(s)	11, 1003
BseXI	GCAGC	3 cut(s)	313, 682, 1361
BseYI	CCCAGC	3 cut(s)	183, 195, 893
BsgI	GTGCAG	1 cut(s)	500
Bsh1236I	CGCG	3 cut(s)	46, 152, 311
Bsh1285I	CGRYCG	2 cut(s)	557, 638
BshFI	GGCC	7 cut(s)	149, 182, 209, 362, 793, 1679, 1779
BshNI	GGYRCC	5 cut(s)	655, 718, 733, 853, 1965
BsiEI	CGRYCG	2 cut(s)	557, 638
BsiHKAI	GWGCWC	4 cut(s)	11, 452, 1260, 2264
BsiHKCI	CYCGRG	2 cut(s)	338, 751
BslFI	GGGAC	3 cut(s)	692, 911, 1548
BsmAI	GTCTC	3 cut(s)	46, 419, 2008
BsmBI	CGTCTC	1 cut(s)	46
BsmFI	GGGAC	3 cut(s)	692, 911, 1548
BsnI	GGCC	7 cut(s)	149, 182, 209, 362, 793, 1679, 1779
Bso31I	GGTCTC	2 cut(s)	419, 2008
BsoBI	CYCGRG	2 cut(s)	338, 751
Bsp1286I	GDGCHC	6 cut(s)	11, 452, 747, 1003, 1260, 2264
Bsp13I	TCCGGA	1 cut(s)	2008
Bsp1407I	TGTACA	1 cut(s)	2217
Bsp143I	GATC	5 cut(s)	21, 55, 342, 2005, 2237
Bsp1720I	GCTNAGC	1 cut(s)	2263
Bsp19I	CCATGG	1 cut(s)	1395
BspANI	GGCC	7 cut(s)	149, 182, 209, 362, 793, 1679, 1779
BspCNI	CTCAG	5 cut(s)	985, 1184, 1337, 1674, 2276
BspEI	TCCGGA	1 cut(s)	2008
BspFNI	CGCG	3 cut(s)	46, 152, 311
BspHI	TCATGA	3 cut(s)	69, 1260, 1588
BspMI	ACCTGC	1 cut(s)	910
BspPI	GGATC	2 cut(s)	63, 2000
BspQI	GCTCTTC	2 cut(s)	801, 1170
BspT107I	GGYRCC	5 cut(s)	655, 718, 733, 853, 1965
BspTNI	GGTCTC	2 cut(s)	419, 2008
BsrBI	CCGCTC	2 cut(s)	110, 316
BsrDI	GCAATG	1 cut(s)	2041
BsrFI	RCCGGY	1 cut(s)	889
BsrGI	TGTACA	1 cut(s)	2217
BsrI	ACTGG	6 cut(s)	148, 214, 812, 1438, 1516, 2164
BssAI	RCCGGY	1 cut(s)	889
BssECI	CCNNGG	6 cut(s)	169, 357, 551, 632, 1194, 1395
BssMI	GATC	5 cut(s)	21, 55, 342, 2005, 2237
BssNI	GRCGYC	2 cut(s)	78, 719
BssSI	CACGAG	1 cut(s)	1508
BssT1I	CCWWGG	3 cut(s)	169, 357, 1395
Bst2BI	CACGAG	1 cut(s)	1508
Bst4CI	ACNGT	8 cut(s)	655, 904, 1198, 1408, 1600, 1638, 2074, 2118
Bst6I	CTCTTC	6 cut(s)	276, 801, 821, 843, 1170, 2075
BstACI	GRCGYC	2 cut(s)	78, 719
BstAUI	TGTACA	1 cut(s)	2217
BstDEI	CTNAG	6 cut(s)	993, 1014, 1171, 1324, 1682, 2263
BstDSI	CCRYGG	2 cut(s)	1194, 1395
BstF5I	GGATG	5 cut(s)	409, 1165, 1479, 1707, 2104
BstFNI	CGCG	3 cut(s)	46, 152, 311
BstH2I	RGCGCY	1 cut(s)	722
BstHHI	GCGC	3 cut(s)	313, 721, 1596
BstKTI	GATC	5 cut(s)	24, 58, 345, 2008, 2240
BstMAI	GTCTC	3 cut(s)	46, 419, 2008
BstMBI	GATC	5 cut(s)	21, 55, 342, 2005, 2237
BstMCI	CGRYCG	2 cut(s)	557, 638
BstNSI	RCATGY	2 cut(s)	337, 1390
BstSCI	CCNGG	5 cut(s)	362, 551, 632, 1031, 1922
BstSLI	GKGCMC	2 cut(s)	11, 1003
BstUI	CGCG	3 cut(s)	46, 152, 311
BstV1I	GCAGC	3 cut(s)	313, 682, 1361
BstV2I	GAAGAC	4 cut(s)	507, 582, 905, 2097
BstX2I	RGATCY	1 cut(s)	2005
BstXI	CCANNNNNNTGG	2 cut(s)	802, 1201
BstYI	RGATCY	1 cut(s)	2005
Bsu36I	CCTNAGG	1 cut(s)	1682
BsuRI	GGCC	7 cut(s)	149, 182, 209, 362, 793, 1679, 1779
BtgI	CCRYGG	2 cut(s)	1194, 1395
BtrI	CACGTC	1 cut(s)	712
BtsCI	GGATG	5 cut(s)	409, 1165, 1479, 1707, 2104
BtsI	GCAGTG	1 cut(s)	1359
BtsIMutI	CAGTG	5 cut(s)	141, 819, 1359, 1413, 1596
BveI	ACCTGC	1 cut(s)	910
CciI	TCATGA	3 cut(s)	69, 1260, 1588
CfoI	GCGC	3 cut(s)	313, 721, 1596
Cfr10I	RCCGGY	1 cut(s)	889
CseI	GACGC	1 cut(s)	86
Csp6I	GTAC	4 cut(s)	1273, 1317, 1966, 2218
CviQI	GTAC	4 cut(s)	1273, 1317, 1966, 2218
DdeI	CTNAG	6 cut(s)	993, 1014, 1171, 1324, 1682, 2263
DinI	GGCGCC	1 cut(s)	720
DpnI	GATC	5 cut(s)	23, 57, 344, 2007, 2239
DpnII	GATC	5 cut(s)	21, 55, 342, 2005, 2237
DraI	TTTAAA	1 cut(s)	1126
DriI	GACNNNNNGTC	2 cut(s)	82, 1390
Eam1104I	CTCTTC	6 cut(s)	276, 801, 821, 843, 1170, 2075
Eam1105I	GACNNNNNGTC	2 cut(s)	82, 1390
EarI	CTCTTC	6 cut(s)	276, 801, 821, 843, 1170, 2075
EciI	GGCGGA	6 cut(s)	225, 270, 276, 537, 618, 855
Ecl136II	GAGCTC	2 cut(s)	1258, 2262
Eco130I	CCWWGG	3 cut(s)	169, 357, 1395
Eco24I	GRGCYC	3 cut(s)	747, 1260, 2264
Eco31I	GGTCTC	2 cut(s)	419, 2008
Eco32I	GATATC	1 cut(s)	1502
Eco47I	GGWCC	3 cut(s)	366, 925, 2232
Eco53kI	GAGCTC	2 cut(s)	1258, 2262
Eco57I	CTGAAG	3 cut(s)	845, 1898, 2108
Eco81I	CCTNAGG	1 cut(s)	1682
Eco88I	CYCGRG	2 cut(s)	338, 751
EcoICRI	GAGCTC	2 cut(s)	1258, 2262
EcoO109I	RGGNCCY	3 cut(s)	208, 1678, 1777
EcoRI	GAATTC	2 cut(s)	1131, 1755
EcoRV	GATATC	1 cut(s)	1502
EcoT14I	CCWWGG	3 cut(s)	169, 357, 1395
EcoT38I	GRGCYC	3 cut(s)	747, 1260, 2264
EgeI	GGCGCC	1 cut(s)	720
EheI	GGCGCC	1 cut(s)	720
ErhI	CCWWGG	3 cut(s)	169, 357, 1395
Esp3I	CGTCTC	1 cut(s)	46
FalI	AAGNNNNNCTT	2 cut(s)	1148, 1180
FaqI	GGGAC	3 cut(s)	692, 911, 1548
FauI	CCCGC	3 cut(s)	198, 241, 315
FblI	GTMKAC	2 cut(s)	708, 1383
FokI	GGATG	5 cut(s)	416, 1172, 1486, 1694, 2111
FriOI	GRGCYC	3 cut(s)	747, 1260, 2264
FspBI	CTAG	4 cut(s)	438, 1089, 1805, 2148
GlaI	GCGC	3 cut(s)	312, 720, 1595
GsaI	CCCAGC	3 cut(s)	187, 199, 897
GsuI	CTGGAG	2 cut(s)	197, 302
HaeII	RGCGCY	1 cut(s)	722
HaeIII	GGCC	7 cut(s)	149, 182, 209, 362, 793, 1679, 1779
HgaI	GACGC	1 cut(s)	86
HhaI	GCGC	3 cut(s)	313, 721, 1596
Hin1I	GRCGYC	2 cut(s)	78, 719
Hin6I	GCGC	3 cut(s)	311, 719, 1594
HinP1I	GCGC	3 cut(s)	311, 719, 1594
HincII	GTYRAC	2 cut(s)	709, 1384
HindII	GTYRAC	2 cut(s)	709, 1384
HindIII	AAGCTT	1 cut(s)	1646
HinfI	GANTC	8 cut(s)	766, 832, 1114, 1169, 1357, 1400, 1762, 1919
HphI	GGTGA	3 cut(s)	295, 1496, 2140
Hpy166II	GTNNAC	4 cut(s)	9, 709, 1384, 1572
Hpy8I	GTNNAC	4 cut(s)	9, 709, 1384, 1572
HpyAV	CCTTC	9 cut(s)	109, 276, 751, 769, 904, 946, 1276, 1897, 2132
HpyCH4III	ACNGT	8 cut(s)	655, 904, 1198, 1408, 1600, 1638, 2074, 2118
HpyCH4IV	ACGT	2 cut(s)	257, 711
HpyCH4V	TGCA	9 cut(s)	9, 51, 481, 1366, 1390, 1469, 1621, 2048, 2111
HpyF3I	CTNAG	6 cut(s)	993, 1014, 1171, 1324, 1682, 2263
HpySE526I	ACGT	2 cut(s)	257, 711
Hsp92I	GRCGYC	2 cut(s)	78, 719
HspAI	GCGC	3 cut(s)	311, 719, 1594
KasI	GGCGCC	1 cut(s)	718
Kpn2I	TCCGGA	1 cut(s)	2008
KpnI	GGTACC	1 cut(s)	1969
KroI	GCCGGC	1 cut(s)	889
KroNI	GCCGGC	1 cut(s)	891
Kzo9I	GATC	5 cut(s)	21, 55, 342, 2005, 2237
LguI	GCTCTTC	2 cut(s)	801, 1170
LmnI	GCTCC	6 cut(s)	321, 441, 742, 820, 886, 1041
Lsp1109I	GCAGC	3 cut(s)	313, 682, 1361
LweI	GCATC	2 cut(s)	682, 1086
MaeI	CTAG	4 cut(s)	438, 1089, 1805, 2148
MaeII	ACGT	2 cut(s)	257, 711
MaeIII	GTNAC	2 cut(s)	1528, 1655
MalI	GATC	5 cut(s)	23, 57, 344, 2007, 2239
MbiI	CCGCTC	2 cut(s)	110, 316
MboI	GATC	5 cut(s)	21, 55, 342, 2005, 2237
MfeI	CAATTG	1 cut(s)	1604
MflI	RGATCY	1 cut(s)	2005
MhlI	GDGCHC	6 cut(s)	11, 452, 747, 1003, 1260, 2264
Mly113I	GGCGCC	1 cut(s)	719
MlyI	GAGTC	4 cut(s)	841, 1163, 1366, 1394
MmeI	TCCRAC	2 cut(s)	1002, 2169
MroI	TCCGGA	1 cut(s)	2008
MroNI	GCCGGC	1 cut(s)	889
MroXI	GAANNNNTTC	3 cut(s)	65, 98, 779
MseI	TTAA	5 cut(s)	942, 1125, 1701, 2061, 2154
MslI	CAYNNNNRTG	2 cut(s)	1587, 2253
MspA1I	CMGCKG	1 cut(s)	322
MspR9I	CCNGG	5 cut(s)	364, 553, 634, 1033, 1924
MunI	CAATTG	1 cut(s)	1604
MvnI	CGCG	3 cut(s)	46, 152, 311
NaeI	GCCGGC	1 cut(s)	891
NarI	GGCGCC	1 cut(s)	719
NciI	CCSGG	5 cut(s)	364, 553, 634, 1033, 1924
NcoI	CCATGG	1 cut(s)	1395
NdeII	GATC	5 cut(s)	21, 55, 342, 2005, 2237
NgoMIV	GCCGGC	1 cut(s)	889
NmuCI	GTSAC	1 cut(s)	1528
NspI	RCATGY	2 cut(s)	337, 1390
PaeI	GCATGC	1 cut(s)	337
PagI	TCATGA	3 cut(s)	69, 1260, 1588
PaqCI	CACCTGC	1 cut(s)	910
PciSI	GCTCTTC	2 cut(s)	801, 1170
PcsI	WCGNNNNNNNCGW	5 cut(s)	36, 171, 510, 585, 614
PdiI	GCCGGC	1 cut(s)	891
PdmI	GAANNNNTTC	3 cut(s)	65, 98, 779
PfeI	GAWTC	4 cut(s)	766, 1114, 1762, 1919
PfoI	TCCNGGA	1 cut(s)	1922
PleI	GAGTC	4 cut(s)	840, 1163, 1365, 1394
PluTI	GGCGCC	1 cut(s)	722
PpsI	GAGTC	4 cut(s)	840, 1163, 1365, 1394
Psp124BI	GAGCTC	2 cut(s)	1260, 2264
PspFI	CCCAGC	3 cut(s)	183, 195, 893
PsuI	RGATCY	1 cut(s)	2005
RsaI	GTAC	4 cut(s)	1274, 1318, 1967, 2219
RsaNI	GTAC	4 cut(s)	1273, 1317, 1966, 2218
RseI	CAYNNNNRTG	2 cut(s)	1587, 2253
SacI	GAGCTC	2 cut(s)	1260, 2264
SalI	GTCGAC	2 cut(s)	707, 1382
SapI	GCTCTTC	2 cut(s)	801, 1170
SaqAI	TTAA	5 cut(s)	942, 1125, 1701, 2061, 2154
Sau3AI	GATC	5 cut(s)	21, 55, 342, 2005, 2237
ScaI	AGTACT	1 cut(s)	1318
SchI	GAGTC	4 cut(s)	841, 1163, 1366, 1394
ScrFI	CCNGG	5 cut(s)	364, 553, 634, 1033, 1924
SduI	GDGCHC	6 cut(s)	11, 452, 747, 1003, 1260, 2264
SfaNI	GCATC	2 cut(s)	682, 1086
SfoI	GGCGCC	1 cut(s)	720
SgrDI	CGTCGACG	1 cut(s)	707
SinI	GGWCC	3 cut(s)	366, 925, 2232
SmiMI	CAYNNNNRTG	2 cut(s)	1587, 2253
SmlI	CTYRAG	4 cut(s)	430, 983, 1787, 2227
SmoI	CTYRAG	4 cut(s)	430, 983, 1787, 2227
SpeI	ACTAGT	1 cut(s)	2147
SphI	GCATGC	1 cut(s)	337
SspDI	GGCGCC	1 cut(s)	718
SspMI	CTAG	4 cut(s)	438, 1089, 1805, 2148
SstI	GAGCTC	2 cut(s)	1260, 2264
StyD4I	CCNGG	5 cut(s)	362, 551, 632, 1031, 1922
StyI	CCWWGG	3 cut(s)	169, 357, 1395
TaaI	ACNGT	8 cut(s)	655, 904, 1198, 1408, 1600, 1638, 2074, 2118
TaiI	ACGT	2 cut(s)	260, 714
TaqI	TCGA	7 cut(s)	24, 387, 557, 708, 783, 1167, 1383
TatI	WGTACW	2 cut(s)	1316, 2217
TfiI	GAWTC	4 cut(s)	766, 1114, 1762, 1919
Tru1I	TTAA	5 cut(s)	942, 1125, 1701, 2061, 2154
Tru9I	TTAA	5 cut(s)	942, 1125, 1701, 2061, 2154
TscAI	CASTG	5 cut(s)	148, 819, 1359, 1413, 1603
TseFI	GTSAC	1 cut(s)	1528
TseI	GCWGC	3 cut(s)	326, 670, 1349
Tsp45I	GTSAC	1 cut(s)	1528
TspDTI	ATGAA	9 cut(s)	58, 86, 1197, 1254, 1277, 1910, 1916, 1994, 2115
TspGWI	ACGGA	6 cut(s)	519, 531, 594, 606, 694, 1327
TspRI	CASTG	5 cut(s)	148, 819, 1359, 1413, 1603
VneI	GTGCAC	1 cut(s)	7
VpaK11BI	GGWCC	3 cut(s)	366, 925, 2232
XapI	RAATTY	7 cut(s)	298, 506, 581, 1131, 1138, 1265, 1755
XbaI	TCTAGA	1 cut(s)	1804
XceI	RCATGY	2 cut(s)	337, 1390
XmiI	GTMKAC	2 cut(s)	708, 1383
XmnI	GAANNNNTTC	3 cut(s)	65, 98, 779
XspI	CTAG	4 cut(s)	438, 1089, 1805, 2148
ZrmI	AGTACT	1 cut(s)	1318

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.