MD17G1201400.v1.1
MYB Family

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0014126
Physical Location & Seq
Forward (+)
24339114 .. 24342300
3187 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1201400.v1.1.491

Sequence Viewer

Length: 2238 bp
ATGGCTTTCGATTACGCATTCACCGGAGGCGAAATGGAAATCGATGACGGCCTCGGGTACCCAAAAGCCTACGCGAAGCTCTGCCGCGACCGCAGCGTTGGACCTTACAGCCATGGCCCTCCTTTCACTTTCATGCCTTACTGTCTGCAGCAAGAGGAGGATCTGAGAGCAAGAGATTTAGAGCAGATGTTTCCGGTTATTGACCCGAAAGCGAAACCTACTGCCAGGCCGAAGATTTTCGTCAGTCTTTTGTGGAAGCAGCTCAACCACCTTGGGAATGCCGGCTTTGATCCTGCGGTAATTCGAGTAGACTCGTATGGCAACGTTCTGTATTTCCATGCTGATTCTGCTTCTCCTCTTGCTTGGGACATAGATCACTGGTTTCCTTGCTCAAGGGGAGGATTGACTGTCCCAAGCAATTTGAGGATACTGCAATGGCAAGCCTGCAAGAGGAAGCATGACATGCTTGAATTTCTCATTCCATGGTGGGATTTTCAGTTGGGTATATCCGTCAACCAGTTCTTATCGATATTTGCTTCTACCAATGCCGATTTCAGGCACAGGGCATTCTCGTTTCTCTTCGCTGAAGGTGAATGCGAGGAGCTCAATTCTTCACAGACGGTAGAGTCCCACGCTTTTCCGCAACATTATGTGGAATCGAAAGAGCATTTGGGCCTAGCTCCGGCTGCCATTGTTGTATCTCGAAGAGAGTCATATGGTTCTTCATCTGCTTTGAAATCCCTGGACTACAATAAGCAGATAAGGCCACAATCTCCTGCAATTGCTGCAAGAAATGGGAAACATGCAGTTTTGAAAGAAAATGAGAACCCGGAGTTCGTTAGAAACCCATACCAAGCGATTGTCATGGCAAGAGATTCCCTAAAACAAAGGGAACAAACTGCAAAGATGCAGGCTGAGATACACAACTTGGATGATGAAGTGAATGAATTGAGGCGAAAAAATGAAGATGAGAAGCTCACCATTCAAAACTTGGAGCTGACGTTGATAAAGCGAAGGAGAAGAGCAGAGAAGTGCCGGCGACTAGCAGAGGCACAATCATCATATAGGACCACACTCGAAAAGATGATTCGAGATGCTATGCACCAGTCTGTCATTTACAAGGAGCAACTGAGACTGAACCAAGCTGCAAGTAGTGCGCTCATGGCAAGACTTGAGGCACAAAAGGCAATATGTGATGCATCGGAGAAAGAACTTCATAAGAAATACAAACAAAGAGATGAGCTTGAGACACAGATACGGCCTGAATGGGAACAAGCAAGGAAAAGGTCGAGAATGGATGATGCATTAGCTGAGGAGAGGGATAGCAAGATGGTCCTTTGTCTACCAGCAACCAAGCCAAGAACGCCTTTACGTAAGGAACTAAGGGTATTTCTAGAGGAAGAACAGAAGGCATCTGATGCTGCTTTATCACAGAATGAAGACGATAGAAGAATTCAACTGTACGAGGAACTGGAAAGACCGAAAAAACGTTTGTCTATTGACAACCTCAGAGAGCAGGCCAGATACAGTGTTGCATTAGAGGATGAGAGCTTGTTAGAGAATCAAATGCGGACACTGCAAATAGAAGGGAAGCACAAATTTCAATTCCCTGTCATTCGAGAACCAGAGATTGTGGAAGATGAAGAGAGCAGAAAAGAACGTGGCAAGGGGAATGTAGAGAAGTGGCTTCAGATTCTGTTGGATAGTTCTCCAGAAGAGTTGGATCCTAAGAATGAAAGTGCAAATGAAGAGCACAGGACCGGTGATATAATCAGTCAAGTTGAAGAAGGTGCAAATGAAAAACACAGGACCAGTGATATAATCAGTCAAATGAATTTGAAGTACCCACAGGAAGTCAAGAATCTTAAGTGTCCAGAGGCTGATGCTAAAGCAGGTGTACTGAAGCAGCAGTTAATTGTCCAAGAGAAGAATGAAAATGCACATCAAGTGCATACTCCTGTTAAGGTCCTTAAGGGAGTTGTTAGCAGGAAGAGTTTTGAAGGGAGGGAAAGAAGGGACCATAGTAACGGAAAGGAAAGAAAACTTACAAGGTCTGAGAGTGCTAGAGTCTTTCGACGAATCCCATCTTCTCCATCTATAATTTTGGGCATGAAAAAGGGTGTTGACTGCATACGAAAGAAGCCCATGGTAACCAGTGATGATGAAGAGAGCTATGCTACGGGAAACAAATTTATGAAGTCATCTATAAAAACAATCAAGAAAGGAGTGAAAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

746

Amino Acids

85.9

Weight (kDa)

8.53

Isoelectric Point (pI)

58.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014126)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G15550
fragaria_vesca FvH4_6g30700 FvH4_6g30700
malus_domestica MD17G1201400.v1.1
prunus_persica Prupe.3G077300_v2.0.a1
pyrus_communis pycom17g20530
rosa_chinensis RchiOBHm_Chr2g0137071
rosa_laevigata RLG00000019604
rosa_multiflora Rmu_sc0001374.1_g000024
rosa_roxburghii Rroxscaffold_2G00107700
rosa_rugosa Rorug02G0337700 Rorug02G0337800
rosa_samantha Rh2AG386900 Rh2BG393700 Rh2CG374200 Rh2DG409800
rosa_wichuraiana Rw2G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1883
AasI GACNNNNNNGTC 1 cut(s) 625
Acc36I ACCTGC 1 cut(s) 1883
Acc65I GGTACC 1 cut(s) 57
AccB1I GGYRCC 1 cut(s) 57
AccI GTMKAC 2 cut(s) 309, 1342
AccII CGCG 2 cut(s) 74, 87
AciI CCGC 5 cut(s) 85, 91, 296, 641, 1570
AclI AACGTT 2 cut(s) 324, 1489
AclWI GGATC 4 cut(s) 168, 284, 1718, 1731
AcsI RAATTY 5 cut(s) 470, 1452, 1598, 1834, 2189
AcuI CTGAAG 3 cut(s) 606, 1673, 1922
AfaI GTAC 4 cut(s) 59, 1463, 1844, 1899
AfiI CCNNNNNNNGG 3 cut(s) 450, 555, 682
AflII CTTAAG 2 cut(s) 1865, 1970
AgeI ACCGGT 1 cut(s) 1760
AgsI TTSAA 9 cut(s) 470, 736, 814, 986, 1457, 1604, 1784, 1840, 2000
AjnI CCWGG 2 cut(s) 224, 741
AjuI GAANNNNNNNTTGG 4 cut(s) 536, 568, 653, 685
Alw21I GWGCWC 2 cut(s) 606, 1755
Alw26I GTCTC 2 cut(s) 1126, 1241
AlwI GGATC 4 cut(s) 168, 284, 1718, 1731
AlwNI CAGNNNCTG 2 cut(s) 1696, 1880
Ama87I CYCGRG 1 cut(s) 53
AoxI GGCC 7 cut(s) 49, 115, 227, 673, 764, 1259, 1518
ApeKI GCWGC 8 cut(s) 93, 148, 259, 686, 785, 1145, 1421, 1906
ApoI RAATTY 5 cut(s) 470, 1452, 1598, 1834, 2189
AsiGI ACCGGT 1 cut(s) 1760
Asp700I GAANNNNTTC 1 cut(s) 236
Asp718I GGTACC 1 cut(s) 57
AspLEI GCGC 1 cut(s) 1159
AspS9I GGNCC 9 cut(s) 101, 116, 673, 1068, 1333, 1758, 1809, 1966, 2017
AsuC2I CCSGG 1 cut(s) 830
AsuHPI GGTGA 4 cut(s) 13, 602, 970, 1775
AvaI CYCGRG 1 cut(s) 53
AvaII GGWCC 7 cut(s) 101, 1068, 1333, 1758, 1809, 1966, 2017
BamHI GGATCC 1 cut(s) 1723
BanI GGYRCC 1 cut(s) 57
BanII GRGCYC 1 cut(s) 606
BbsI GAAGAC 1 cut(s) 1446
Bbv12I GWGCWC 2 cut(s) 606, 1755
BbvCI CCTCAGC 1 cut(s) 1311
BbvI GCAGC 8 cut(s) 105, 160, 271, 673, 772, 1132, 1408, 1918
BccI CCATC 3 cut(s) 1324, 2092, 2101
BceAI ACGGC 2 cut(s) 64, 1274
BciT130I CCWGG 2 cut(s) 226, 743
BciVI GTATCC 1 cut(s) 420
BcnI CCSGG 1 cut(s) 830
BcoDI GTCTC 2 cut(s) 1126, 1241
BfaI CTAG 4 cut(s) 677, 1043, 1394, 2064
BfmI CTRYAG 1 cut(s) 146
BfrI CTTAAG 2 cut(s) 1865, 1970
BfuAI ACCTGC 1 cut(s) 1883
BfuI GTATCC 1 cut(s) 420
BisI GCNGC 9 cut(s) 85, 94, 149, 260, 687, 786, 1146, 1422, 1907
BlsI GCNGC 9 cut(s) 86, 95, 150, 261, 688, 787, 1147, 1423, 1908
Bme1390I CCNGG 3 cut(s) 226, 743, 830
Bme18I GGWCC 7 cut(s) 101, 1068, 1333, 1758, 1809, 1966, 2017
BmeT110I CYCGRG 1 cut(s) 53
BmgT120I GGNCC 9 cut(s) 101, 116, 673, 1068, 1333, 1758, 1809, 1966, 2017
BmiI GGNNCC 3 cut(s) 59, 1725, 2018
BmrFI CCNGG 3 cut(s) 226, 743, 830
BmsI GCATC 8 cut(s) 897, 1084, 1186, 1208, 1291, 1408, 1421, 1873
BpiI GAAGAC 1 cut(s) 1446
BpmI CTGGAG 1 cut(s) 1695
Bpu10I CCTNAGC 1 cut(s) 1311
BpuEI CTTGAG 3 cut(s) 376, 1193, 1265
BpuMI CCSGG 1 cut(s) 830
Bsa29I ATCGAT 2 cut(s) 42, 527
BsaAI YACGTR 1 cut(s) 1373
BsaJI CCNNGG 6 cut(s) 52, 112, 271, 482, 741, 2145
BsaWI WCCGGW 3 cut(s) 23, 193, 1760
BsaXI ACNNNNNCTCC 2 cut(s) 986, 1016
Bsc4I CCNNNNNNNGG 3 cut(s) 450, 555, 682
Bse118I RCCGGY 3 cut(s) 281, 1035, 1760
Bse1I ACTGG 6 cut(s) 383, 517, 1105, 1476, 1812, 2154
Bse3DI GCAATG 1 cut(s) 440
BseBI CCWGG 2 cut(s) 226, 743
BseCI ATCGAT 2 cut(s) 42, 527
BseDI CCNNGG 6 cut(s) 52, 112, 271, 482, 741, 2145
BseGI GGATG 3 cut(s) 937, 1303, 1549
BseLI CCNNNNNNNGG 3 cut(s) 450, 555, 682
BseMI GCAATG 1 cut(s) 440
BseMII CTCAG 6 cut(s) 155, 906, 1121, 1302, 1522, 2046
BseNI ACTGG 6 cut(s) 383, 517, 1105, 1476, 1812, 2154
BseRI GAGGAG 4 cut(s) 170, 345, 614, 1328
BseXI GCAGC 8 cut(s) 105, 160, 271, 673, 772, 1132, 1408, 1918
Bsh1236I CGCG 2 cut(s) 74, 87
Bsh1285I CGRYCG 1 cut(s) 91
BshFI GGCC 7 cut(s) 51, 117, 229, 675, 766, 1261, 1520
BshNI GGYRCC 1 cut(s) 57
BshTI ACCGGT 1 cut(s) 1760
BshVI ATCGAT 2 cut(s) 42, 527
BsiEI CGRYCG 1 cut(s) 91
BsiHKAI GWGCWC 2 cut(s) 606, 1755
BsiHKCI CYCGRG 1 cut(s) 53
BsiSI CCGG 7 cut(s) 24, 194, 282, 683, 830, 1036, 1761
BslFI GGGAC 4 cut(s) 380, 395, 613, 2030
BslI CCNNNNNNNGG 3 cut(s) 450, 555, 682
BsmAI GTCTC 2 cut(s) 1126, 1241
BsmFI GGGAC 4 cut(s) 380, 395, 613, 2030
BsmI GAATGC 4 cut(s) 17, 283, 566, 599
BsnI GGCC 7 cut(s) 51, 117, 229, 675, 766, 1261, 1520
BsoBI CYCGRG 1 cut(s) 53
Bsp1286I GDGCHC 2 cut(s) 606, 1755
Bsp143I GATC 4 cut(s) 160, 289, 373, 1723
Bsp19I CCATGG 3 cut(s) 112, 482, 2145
BspACI CCGC 5 cut(s) 85, 91, 296, 641, 1570
BspANI GGCC 7 cut(s) 51, 117, 229, 675, 766, 1261, 1520
BspCNI CTCAG 6 cut(s) 156, 907, 1122, 1303, 1521, 2047
BspDI ATCGAT 2 cut(s) 42, 527
BspFNI CGCG 2 cut(s) 74, 87
BspLI GGNNCC 3 cut(s) 59, 1725, 2018
BspMAI CTGCAG 1 cut(s) 150
BspMI ACCTGC 1 cut(s) 1883
BspPI GGATC 4 cut(s) 168, 284, 1718, 1731
BspQI GCTCTTC 2 cut(s) 1015, 1743
BspT107I GGYRCC 1 cut(s) 57
BspTI CTTAAG 2 cut(s) 1865, 1970
BsrDI GCAATG 1 cut(s) 440
BsrFI RCCGGY 3 cut(s) 281, 1035, 1760
BsrI ACTGG 6 cut(s) 383, 517, 1105, 1476, 1812, 2154
BssAI RCCGGY 3 cut(s) 281, 1035, 1760
BssECI CCNNGG 6 cut(s) 52, 112, 271, 482, 741, 2145
BssMI GATC 4 cut(s) 160, 289, 373, 1723
BssT1I CCWWGG 4 cut(s) 112, 271, 482, 2145
Bst2UI CCWGG 2 cut(s) 226, 743
Bst4CI ACNGT 5 cut(s) 143, 409, 622, 1461, 1529
Bst6I CTCTTC 8 cut(s) 584, 700, 1015, 1638, 1710, 1743, 1985, 2160
BstAFI CTTAAG 2 cut(s) 1865, 1970
BstAPI GCANNNNNTGC 4 cut(s) 463, 785, 1154, 1418
BstBAI YACGTR 1 cut(s) 1373
BstC8I GCNNGC 6 cut(s) 283, 441, 445, 912, 1037, 1518
BstDEI CTNAG 8 cut(s) 164, 915, 1130, 1311, 1382, 1508, 1728, 2055
BstDSI CCRYGG 3 cut(s) 112, 482, 2145
BstEII GGTNACC 1 cut(s) 2149
BstENI CCTNNNNNAGG 1 cut(s) 448
BstF5I GGATG 3 cut(s) 937, 1303, 1549
BstFNI CGCG 2 cut(s) 74, 87
BstHHI GCGC 1 cut(s) 1159
BstKTI GATC 4 cut(s) 163, 292, 376, 1726
BstMAI GTCTC 2 cut(s) 1126, 1241
BstMBI GATC 4 cut(s) 160, 289, 373, 1723
BstMCI CGRYCG 1 cut(s) 91
BstNI CCWGG 2 cut(s) 226, 743
BstNSI RCATGY 2 cut(s) 466, 806
BstPI GGTNACC 1 cut(s) 2149
BstSCI CCNGG 3 cut(s) 224, 741, 828
BstSFI CTRYAG 1 cut(s) 146
BstSNI TACGTA 1 cut(s) 1373
BstUI CGCG 2 cut(s) 74, 87
BstV1I GCAGC 8 cut(s) 105, 160, 271, 673, 772, 1132, 1408, 1918
BstV2I GAAGAC 1 cut(s) 1446
BstX2I RGATCY 2 cut(s) 160, 1723
BstYI RGATCY 2 cut(s) 160, 1723
Bsu15I ATCGAT 2 cut(s) 42, 527
BsuI GTATCC 1 cut(s) 420
BsuRI GGCC 7 cut(s) 51, 117, 229, 675, 766, 1261, 1520
BsuTUI ATCGAT 2 cut(s) 42, 527
BtgI CCRYGG 3 cut(s) 112, 482, 2145
BtsCI GGATG 3 cut(s) 937, 1303, 1549
BtsI GCAGTG 1 cut(s) 1574
BtsIMutI CAGTG 5 cut(s) 376, 1534, 1574, 1819, 2161
BveI ACCTGC 1 cut(s) 1883
Cac8I GCNNGC 6 cut(s) 283, 441, 445, 912, 1037, 1518
CaiI CAGNNNCTG 2 cut(s) 1696, 1880
CfoI GCGC 1 cut(s) 1159
Cfr10I RCCGGY 3 cut(s) 281, 1035, 1760
Cfr13I GGNCC 9 cut(s) 101, 116, 673, 1068, 1333, 1758, 1809, 1966, 2017
ClaI ATCGAT 2 cut(s) 42, 527
Csp6I GTAC 4 cut(s) 58, 1462, 1843, 1898
CspAI ACCGGT 1 cut(s) 1760
CviQI GTAC 4 cut(s) 58, 1462, 1843, 1898
DdeI CTNAG 8 cut(s) 164, 915, 1130, 1311, 1382, 1508, 1728, 2055
DpnI GATC 4 cut(s) 162, 291, 375, 1725
DpnII GATC 4 cut(s) 160, 289, 373, 1723
DrdI GACNNNNNNGTC 1 cut(s) 625
DseDI GACNNNNNNGTC 1 cut(s) 625
Eam1104I CTCTTC 8 cut(s) 584, 700, 1015, 1638, 1710, 1743, 1985, 2160
EarI CTCTTC 8 cut(s) 584, 700, 1015, 1638, 1710, 1743, 1985, 2160
Ecl136II GAGCTC 1 cut(s) 604
Eco105I TACGTA 1 cut(s) 1373
Eco130I CCWWGG 4 cut(s) 112, 271, 482, 2145
Eco24I GRGCYC 1 cut(s) 606
Eco47I GGWCC 7 cut(s) 101, 1068, 1333, 1758, 1809, 1966, 2017
Eco53kI GAGCTC 1 cut(s) 604
Eco57I CTGAAG 3 cut(s) 606, 1673, 1922
Eco88I CYCGRG 1 cut(s) 53
Eco91I GGTNACC 1 cut(s) 2149
EcoICRI GAGCTC 1 cut(s) 604
EcoNI CCTNNNNNAGG 1 cut(s) 448
EcoO109I RGGNCCY 1 cut(s) 1966
EcoO65I GGTNACC 1 cut(s) 2149
EcoRI GAATTC 1 cut(s) 1452
EcoRII CCWGG 2 cut(s) 224, 741
EcoT14I CCWWGG 4 cut(s) 112, 271, 482, 2145
EcoT22I ATGCAT 2 cut(s) 1201, 1306
EcoT38I GRGCYC 1 cut(s) 606
ErhI CCWWGG 4 cut(s) 112, 271, 482, 2145
FalI AAGNNNNNCTT 2 cut(s) 1351, 1383
FaqI GGGAC 4 cut(s) 380, 395, 613, 2030
FauNDI CATATG 1 cut(s) 715
FblI GTMKAC 2 cut(s) 309, 1342
Fnu4HI GCNGC 9 cut(s) 85, 94, 149, 260, 687, 786, 1146, 1422, 1907
FokI GGATG 3 cut(s) 944, 1310, 1556
FriOI GRGCYC 1 cut(s) 606
Fsp4HI GCNGC 9 cut(s) 85, 94, 149, 260, 687, 786, 1146, 1422, 1907
FspBI CTAG 4 cut(s) 677, 1043, 1394, 2064
GlaI GCGC 1 cut(s) 1158
GluI GCNGC 9 cut(s) 85, 94, 149, 260, 687, 786, 1146, 1422, 1907
GsuI CTGGAG 1 cut(s) 1695
HaeIII GGCC 7 cut(s) 51, 117, 229, 675, 766, 1261, 1520
HapII CCGG 7 cut(s) 24, 194, 282, 683, 830, 1036, 1761
HhaI GCGC 1 cut(s) 1159
Hin6I GCGC 1 cut(s) 1157
HinP1I GCGC 1 cut(s) 1157
HincII GTYRAC 2 cut(s) 514, 2125
HindII GTYRAC 2 cut(s) 514, 2125
HpaII CCGG 7 cut(s) 24, 194, 282, 683, 830, 1036, 1761
HphI GGTGA 4 cut(s) 13, 602, 970, 1775
Hpy166II GTNNAC 5 cut(s) 310, 514, 1343, 1898, 2125
Hpy188I TCNGA 6 cut(s) 165, 1204, 1417, 1511, 1692, 2056
Hpy188III TCNNGA 9 cut(s) 702, 1091, 1290, 1394, 1619, 1712, 1858, 1874, 2218
Hpy8I GTNNAC 5 cut(s) 310, 514, 1343, 1898, 2125
Hpy99I CGWCG 1 cut(s) 2079
HpyAV CCTTC 7 cut(s) 581, 1008, 1402, 1580, 1781, 1994, 2007
HpyCH4III ACNGT 5 cut(s) 143, 409, 622, 1461, 1529
HpyCH4IV ACGT 5 cut(s) 324, 1001, 1372, 1489, 1660
HpyF3I CTNAG 8 cut(s) 164, 915, 1130, 1311, 1382, 1508, 1728, 2055
HpySE526I ACGT 5 cut(s) 324, 1001, 1372, 1489, 1660
HspAI GCGC 1 cut(s) 1157
KpnI GGTACC 1 cut(s) 61
KroI GCCGGC 2 cut(s) 281, 1035
KroNI GCCGGC 2 cut(s) 283, 1037
Kzo9I GATC 4 cut(s) 160, 289, 373, 1723
LguI GCTCTTC 2 cut(s) 1015, 1743
LmnI GCTCC 4 cut(s) 601, 685, 994, 1123
Lsp1109I GCAGC 8 cut(s) 105, 160, 271, 673, 772, 1132, 1408, 1918
LweI GCATC 8 cut(s) 897, 1084, 1186, 1208, 1291, 1408, 1421, 1873
MaeI CTAG 4 cut(s) 677, 1043, 1394, 2064
MaeII ACGT 5 cut(s) 324, 1001, 1372, 1489, 1660
MaeIII GTNAC 2 cut(s) 2024, 2149
MalI GATC 4 cut(s) 162, 291, 375, 1725
MboI GATC 4 cut(s) 160, 289, 373, 1723
MfeI CAATTG 1 cut(s) 780
MflI RGATCY 2 cut(s) 160, 1723
MhlI GDGCHC 2 cut(s) 606, 1755
MlyI GAGTC 4 cut(s) 305, 635, 719, 2076
MmeI TCCRAC 3 cut(s) 79, 1680, 1701
Mph1103I ATGCAT 2 cut(s) 1201, 1306
MroNI GCCGGC 2 cut(s) 281, 1035
MroXI GAANNNNTTC 1 cut(s) 236
MseI TTAA 4 cut(s) 1866, 1913, 1962, 1971
MslI CAYNNNNRTG 1 cut(s) 131
MspCI CTTAAG 2 cut(s) 1865, 1970
MspI CCGG 7 cut(s) 24, 194, 282, 683, 830, 1036, 1761
MspR9I CCNGG 3 cut(s) 226, 743, 830
MunI CAATTG 1 cut(s) 780
Mva1269I GAATGC 4 cut(s) 17, 283, 566, 599
MvaI CCWGG 2 cut(s) 226, 743
MvnI CGCG 2 cut(s) 74, 87
NaeI GCCGGC 2 cut(s) 283, 1037
NciI CCSGG 1 cut(s) 830
NcoI CCATGG 3 cut(s) 112, 482, 2145
NdeI CATATG 1 cut(s) 715
NdeII GATC 4 cut(s) 160, 289, 373, 1723
NgoMIV GCCGGC 2 cut(s) 281, 1035
NlaIV GGNNCC 3 cut(s) 59, 1725, 2018
NsiI ATGCAT 2 cut(s) 1201, 1306
NspI RCATGY 2 cut(s) 466, 806
PaqCI CACCTGC 1 cut(s) 1883
PciSI GCTCTTC 2 cut(s) 1015, 1743
PctI GAATGC 4 cut(s) 17, 283, 566, 599
PdiI GCCGGC 2 cut(s) 283, 1037
PdmI GAANNNNTTC 1 cut(s) 236
PfeI GAWTC 8 cut(s) 344, 656, 875, 1087, 1561, 1693, 1861, 2079
PinAI ACCGGT 1 cut(s) 1760
PkrI GCNGC 9 cut(s) 86, 95, 150, 261, 688, 787, 1147, 1423, 1908
PleI GAGTC 4 cut(s) 305, 634, 718, 2075
PpsI GAGTC 4 cut(s) 305, 634, 718, 2075
Ppu21I YACGTR 1 cut(s) 1373
PpuMI RGGWCCY 1 cut(s) 1966
Psp124BI GAGCTC 1 cut(s) 606
Psp1406I AACGTT 2 cut(s) 324, 1489
Psp5II RGGWCCY 1 cut(s) 1966
Psp6I CCWGG 2 cut(s) 224, 741
PspEI GGTNACC 1 cut(s) 2149
PspGI CCWGG 2 cut(s) 224, 741
PspN4I GGNNCC 3 cut(s) 59, 1725, 2018
PspPI GGNCC 9 cut(s) 101, 116, 673, 1068, 1333, 1758, 1809, 1966, 2017
PspPPI RGGWCCY 1 cut(s) 1966
PstI CTGCAG 1 cut(s) 150
PstNI CAGNNNCTG 2 cut(s) 1696, 1880
PsuI RGATCY 2 cut(s) 160, 1723
RsaI GTAC 4 cut(s) 59, 1463, 1844, 1899
RsaNI GTAC 4 cut(s) 58, 1462, 1843, 1898
RseI CAYNNNNRTG 1 cut(s) 131
SacI GAGCTC 1 cut(s) 606
SapI GCTCTTC 2 cut(s) 1015, 1743
SaqAI TTAA 4 cut(s) 1866, 1913, 1962, 1971
SatI GCNGC 9 cut(s) 85, 94, 149, 260, 687, 786, 1146, 1422, 1907
Sau3AI GATC 4 cut(s) 160, 289, 373, 1723
Sau96I GGNCC 9 cut(s) 101, 116, 673, 1068, 1333, 1758, 1809, 1966, 2017
SchI GAGTC 4 cut(s) 305, 635, 719, 2076
ScrFI CCNGG 3 cut(s) 226, 743, 830
SduI GDGCHC 2 cut(s) 606, 1755
SfaNI GCATC 8 cut(s) 897, 1084, 1186, 1208, 1291, 1408, 1421, 1873
SfcI CTRYAG 1 cut(s) 146
SinI GGWCC 7 cut(s) 101, 1068, 1333, 1758, 1809, 1966, 2017
SmiMI CAYNNNNRTG 1 cut(s) 131
SmlI CTYRAG 5 cut(s) 391, 1172, 1244, 1865, 1970
SmoI CTYRAG 5 cut(s) 391, 1172, 1244, 1865, 1970
SnaBI TACGTA 1 cut(s) 1373
SsiI CCGC 5 cut(s) 85, 91, 296, 641, 1570
SspMI CTAG 4 cut(s) 677, 1043, 1394, 2064
SstI GAGCTC 1 cut(s) 606
StyD4I CCNGG 3 cut(s) 224, 741, 828
StyI CCWWGG 4 cut(s) 112, 271, 482, 2145
TaaI ACNGT 5 cut(s) 143, 409, 622, 1461, 1529
TaiI ACGT 5 cut(s) 327, 1004, 1375, 1492, 1663
TaqII GACCGA 1 cut(s) 1495
TatI WGTACW 1 cut(s) 1897
TauI GCSGC 1 cut(s) 87
TfiI GAWTC 8 cut(s) 344, 656, 875, 1087, 1561, 1693, 1861, 2079
Tru1I TTAA 4 cut(s) 1866, 1913, 1962, 1971
Tru9I TTAA 4 cut(s) 1866, 1913, 1962, 1971
TscAI CASTG 5 cut(s) 383, 1534, 1581, 1819, 2161
TseI GCWGC 8 cut(s) 93, 148, 259, 686, 785, 1145, 1421, 1906
TspGWI ACGGA 2 cut(s) 499, 2043
TspRI CASTG 5 cut(s) 383, 1534, 1581, 1819, 2161
Vha464I CTTAAG 2 cut(s) 1865, 1970
VpaK11BI GGWCC 7 cut(s) 101, 1068, 1333, 1758, 1809, 1966, 2017
XagI CCTNNNNNAGG 1 cut(s) 448
XapI RAATTY 5 cut(s) 470, 1452, 1598, 1834, 2189
XbaI TCTAGA 1 cut(s) 1393
XceI RCATGY 2 cut(s) 466, 806
XcmI CCANNNNNNNNNTGG 1 cut(s) 988
XmiI GTMKAC 2 cut(s) 309, 1342
XmnI GAANNNNTTC 1 cut(s) 236
XspI CTAG 4 cut(s) 677, 1043, 1394, 2064
Zsp2I ATGCAT 2 cut(s) 1201, 1306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.