MD17G1264200.v1.1

4Fe-4S single cluster domain of Ferredoxin I

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0016076
Physical Location & Seq
Reverse (-)
32476116 .. 32480611
4496 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1264200.v1.1.491

Sequence Viewer

Length: 1032 bp
ATGGCTCAATTACTGACCCCATCCCCTGTGTTCACTGAAGCTCTCAAGTTCCAAAACCCATTACGGAATGGGTGCTCTAGAAGCCCATGGCGCATGTTAGCCAAGCCCGGCAGTAGCCTGACTTTGATGGGTGGTCATGGAGGCGGCCGGAGGAGGCGTAGAGGCTATAGCAGGCTCAGAGTGGCAACCGACGACTCACCTTCAACGAACGCCGTCGCTGATGACTACTATTCCGTCTTGGGATTGCTTCCAGATGCAACGCCGGCACAAATAAAAAAGGCGTATTATAATTGTATGAAAGCTTGCCATCCGGACTTGAGTGGTGATAATCCAGACACCAACAATTTCTGCATGTTCATCAATGAGGTCTATGAGGTGCTCAGTGACCCCGTGCAACGCATGGTTTACGACGAAATTCACGGCTATGCTTTGACAGCAATCAATCCTTTCCTGAACGAGTCTGCACCAAAGGATCATGCATTTGTTGATGAGTTTAGCTGCATAGGCTGCAAAAACTGTGCCAGCGTTGCCCCAGACGTCTTTGGAATCGAGGAAGACTTTGGAAGAGCCCGAGTATACAGTCAGTGCGGGAGCGTAGATTTAGTTCAACAGGCAATTGATAGTTGCCCTGTTGATTGCATCCATTGGACTTCTGCTGCTCAACTATCATTGCTCGAAGATGAAATGCGCAGAGTAGAAAGAGTAAACGTTGCACTGATGCTCGCAGGTATGGGCTCATCAGTGGATGTTTTCAGAATGGCAAGTTCTCGGTGGCAAAAGAGGCAATCACAAGTCTTGGAACAAGCTCAAATTAGGATGAAGAAGAAGAAGAAGGATTCAGATAAAACAGAATCATACTGGGACAACATTTGGGGTAACACCAAAGAGTACCAAAATTCAGAGGAGGAAGTGAAAGAAAGATCAAGGAGAGCGGCAGCAGCAGCTCGAAGATGGAGGGAGTACTCAAGGAGGGGTGCTGATAAGCCTCCCAGCTATAAACTTCCGGAGGCCGTCTCCAACGACGAAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000002 GO:0000122 GO:0001775 GO:0001776 GO:0001932 GO:0001933 GO:0001941 GO:0001959 GO:0001960 GO:0002260 GO:0002376 GO:0002520 GO:0002521 GO:0002682 GO:0002683 GO:0002684 GO:0002694 GO:0002696 GO:0003674 GO:0005102 GO:0005126 GO:0005133 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0005886 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006264 GO:0006355 GO:0006357 GO:0006457 GO:0006469 GO:0006725 GO:0006807 GO:0006915 GO:0006919 GO:0006924 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0007005 GO:0007154 GO:0007165 GO:0007264 GO:0007275 GO:0007528 GO:0007568 GO:0007569 GO:0008104 GO:0008134 GO:0008150 GO:0008152 GO:0008219 GO:0008284 GO:0008285 GO:0009058 GO:0009059 GO:0009295 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010466 GO:0010468 GO:0010556 GO:0010558 GO:0010563 GO:0010604 GO:0010605 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010951 GO:0010952 GO:0012501 GO:0016020 GO:0016043 GO:0019219 GO:0019220 GO:0019222 GO:0019897 GO:0019898 GO:0019899 GO:0019900 GO:0019901 GO:0022407 GO:0022409 GO:0023051 GO:0023052 GO:0023057 GO:0030097 GO:0030098 GO:0030154 GO:0030155 GO:0030162 GO:0030217 GO:0030234 GO:0030544 GO:0030695 GO:0030971 GO:0031072 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031347 GO:0031348 GO:0031396 GO:0031398 GO:0031399 GO:0031400 GO:0031401 GO:0031594 GO:0031647 GO:0031974 GO:0032042 GO:0032088 GO:0032268 GO:0032269 GO:0032270 GO:0032501 GO:0032502 GO:0032944 GO:0032946 GO:0033036 GO:0033077 GO:0033673 GO:0034097 GO:0034341 GO:0034613 GO:0034641 GO:0034645 GO:0035556 GO:0042102 GO:0042110 GO:0042127 GO:0042129 GO:0042221 GO:0042325 GO:0042326 GO:0042592 GO:0042645 GO:0042981 GO:0043029 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043086 GO:0043113 GO:0043122 GO:0043124 GO:0043154 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043280 GO:0043281 GO:0043433 GO:0043549 GO:0044092 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044456 GO:0044459 GO:0044464 GO:0045087 GO:0045088 GO:0045202 GO:0045211 GO:0045321 GO:0045785 GO:0045824 GO:0045859 GO:0045861 GO:0045862 GO:0045892 GO:0045934 GO:0045936 GO:0046483 GO:0046649 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048534 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0048869 GO:0048872 GO:0050670 GO:0050671 GO:0050776 GO:0050777 GO:0050789 GO:0050790 GO:0050794 GO:0050808 GO:0050821 GO:0050863 GO:0050865 GO:0050867 GO:0050870 GO:0050896 GO:0051059 GO:0051082 GO:0051090 GO:0051171 GO:0051172 GO:0051173 GO:0051174 GO:0051179 GO:0051246 GO:0051247 GO:0051248 GO:0051249 GO:0051251 GO:0051252 GO:0051253 GO:0051336 GO:0051338 GO:0051345 GO:0051346 GO:0051348 GO:0051641 GO:0051668 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060330 GO:0060331 GO:0060334 GO:0060336 GO:0060548 GO:0060589 GO:0060759 GO:0060761 GO:0061024 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070227 GO:0070231 GO:0070663 GO:0070665 GO:0070727 GO:0071340 GO:0071704 GO:0071840 GO:0071887 GO:0071944 GO:0072657 GO:0080090 GO:0080134 GO:0090304 GO:0097060 GO:0098590 GO:0098772 GO:0098794 GO:0099173 GO:1901360 GO:1901576 GO:1902531 GO:1902532 GO:1902679 GO:1903037 GO:1903039 GO:1903320 GO:1903322 GO:1903506 GO:1903507 GO:1990782 GO:2000112 GO:2000113 GO:2000116 GO:2000117 GO:2001056 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ Fer4_13

Protein Analysis

344

Amino Acids

38.65

Weight (kDa)

7.97

Isoelectric Point (pI)

61.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 75 - 137 4.2e-18 DnaJ domain
Fer4_13 PF13370 162 - 216 6.2e-17 4Fe-4S single cluster domain of Ferredoxin I
Fer4_15 PF13459 162 - 216 1.7e-07 4Fe-4S single cluster domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G42750
fragaria_vesca FvH4_6g27700
malus_domestica MD17G1264200.v1.1
prunus_persica Prupe.3G113500_v2.0.a1
pyrus_communis pycom09g15350
rosa_chinensis RchiOBHm_Chr2g0130851
rosa_laevigata RLG00000019154
rosa_multiflora Rmu_co8506113.1_g000001 Rmu_sc0003629.1_g000017
rosa_roxburghii Rroxscaffold_2G00113490
rosa_rugosa Rorug02G0293700
rosa_samantha Rh2AG345000 Rh2BG353400 Rh2DG371300
rosa_wichuraiana Rw2G027460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 288
AatII GACGTC 1 cut(s) 540
Acc16I TGCGCA 1 cut(s) 689
Acc36I ACCTGC 1 cut(s) 716
AccBSI CCGCTC 1 cut(s) 932
AccI GTMKAC 1 cut(s) 576
AccIII TCCGGA 2 cut(s) 310, 1003
AciI CCGC 3 cut(s) 144, 588, 932
AclI AACGTT 1 cut(s) 708
AclWI GGATC 1 cut(s) 480
AcoI YGGCCR 1 cut(s) 145
AcsI RAATTY 2 cut(s) 414, 895
AcuI CTGAAG 1 cut(s) 57
AcyI GRCGYC 1 cut(s) 537
AfaI GTAC 2 cut(s) 890, 962
AgsI TTSAA 2 cut(s) 204, 608
AluBI AGCT 6 cut(s) 41, 302, 498, 806, 944, 993
AluI AGCT 6 cut(s) 41, 302, 498, 806, 944, 993
Alw21I GWGCWC 2 cut(s) 77, 381
Alw26I GTCTC 1 cut(s) 1018
AlwI GGATC 1 cut(s) 480
Ama87I CYCGRG 1 cut(s) 570
Aor13HI TCCGGA 2 cut(s) 310, 1003
AoxI GGCC 2 cut(s) 145, 1008
ApeKI GCWGC 6 cut(s) 498, 507, 656, 935, 938, 941
ApoI RAATTY 2 cut(s) 414, 895
AspLEI GCGC 2 cut(s) 93, 690
AsuC2I CCSGG 1 cut(s) 108
AsuHPI GGTGA 2 cut(s) 189, 335
AvaI CYCGRG 1 cut(s) 570
BanII GRGCYC 2 cut(s) 571, 737
BbsI GAAGAC 1 cut(s) 561
Bbv12I GWGCWC 2 cut(s) 77, 381
BbvI GCAGC 6 cut(s) 485, 494, 643, 947, 950, 953
BccI CCATC 4 cut(s) 28, 121, 315, 945
BceAI ACGGC 3 cut(s) 197, 436, 995
BcnI CCSGG 1 cut(s) 108
BcoDI GTCTC 1 cut(s) 1018
BfaI CTAG 1 cut(s) 78
BfmI CTRYAG 1 cut(s) 166
BfuAI ACCTGC 1 cut(s) 716
BisI GCNGC 8 cut(s) 145, 499, 508, 657, 933, 936, 939, 942
BlsI GCNGC 8 cut(s) 146, 500, 509, 658, 934, 937, 940, 943
BmcAI AGTACT 1 cut(s) 962
Bme1390I CCNGG 1 cut(s) 108
BmeT110I CYCGRG 1 cut(s) 570
BmrFI CCNGG 1 cut(s) 108
BmrI ACTGGG 1 cut(s) 868
BmsI GCATC 3 cut(s) 244, 648, 708
BmuI ACTGGG 1 cut(s) 868
BpiI GAAGAC 1 cut(s) 561
BplI GAGNNNNNCTC 2 cut(s) 998, 1030
BpuEI CTTGAG 3 cut(s) 29, 337, 949
BpuMI CCSGG 1 cut(s) 108
BsaHI GRCGYC 1 cut(s) 537
BsaJI CCNNGG 1 cut(s) 86
BsaWI WCCGGW 2 cut(s) 310, 1003
BsaXI ACNNNNNCTCC 2 cut(s) 142, 172
Bse118I RCCGGY 1 cut(s) 262
Bse1I ACTGG 1 cut(s) 863
Bse3DI GCAATG 1 cut(s) 668
BseAI TCCGGA 2 cut(s) 310, 1003
BseDI CCNNGG 1 cut(s) 86
BseGI GGATG 5 cut(s) 20, 307, 639, 751, 822
BseMI GCAATG 1 cut(s) 668
BseMII CTCAG 2 cut(s) 190, 394
BseNI ACTGG 1 cut(s) 863
BseRI GAGGAG 2 cut(s) 166, 917
BseX3I CGGCCG 1 cut(s) 145
BseXI GCAGC 6 cut(s) 485, 494, 643, 947, 950, 953
BseYI CCCAGC 1 cut(s) 989
BsgI GTGCAG 1 cut(s) 447
Bsh1285I CGRYCG 1 cut(s) 148
BshFI GGCC 2 cut(s) 147, 1010
BsiEI CGRYCG 1 cut(s) 148
BsiHKAI GWGCWC 2 cut(s) 77, 381
BsiHKCI CYCGRG 1 cut(s) 570
BsiSI CCGG 5 cut(s) 108, 148, 263, 311, 1004
BslFI GGGAC 1 cut(s) 875
BsmAI GTCTC 1 cut(s) 1018
BsmBI CGTCTC 1 cut(s) 1018
BsmFI GGGAC 1 cut(s) 875
BsnI GGCC 2 cut(s) 147, 1010
BsoBI CYCGRG 1 cut(s) 570
Bsp1286I GDGCHC 4 cut(s) 77, 381, 571, 737
Bsp13I TCCGGA 2 cut(s) 310, 1003
Bsp143I GATC 2 cut(s) 472, 920
Bsp19I CCATGG 1 cut(s) 86
BspACI CCGC 3 cut(s) 144, 588, 932
BspANI GGCC 2 cut(s) 147, 1010
BspCNI CTCAG 2 cut(s) 189, 393
BspEI TCCGGA 2 cut(s) 310, 1003
BspMI ACCTGC 1 cut(s) 716
BspPI GGATC 1 cut(s) 480
BspQI GCTCTTC 1 cut(s) 559
BsrBI CCGCTC 1 cut(s) 932
BsrDI GCAATG 1 cut(s) 668
BsrFI RCCGGY 1 cut(s) 262
BsrI ACTGG 1 cut(s) 863
BssAI RCCGGY 1 cut(s) 262
BssECI CCNNGG 1 cut(s) 86
BssMI GATC 2 cut(s) 472, 920
BssNAI GTATAC 1 cut(s) 577
BssNI GRCGYC 1 cut(s) 537
BssT1I CCWWGG 1 cut(s) 86
Bst1107I GTATAC 1 cut(s) 577
Bst4CI ACNGT 2 cut(s) 518, 581
Bst6I CTCTTC 1 cut(s) 559
BstACI GRCGYC 1 cut(s) 537
BstAPI GCANNNNNTGC 1 cut(s) 507
BstC8I GCNNGC 5 cut(s) 173, 264, 304, 523, 723
BstDEI CTNAG 2 cut(s) 176, 380
BstDSI CCRYGG 1 cut(s) 86
BstF5I GGATG 5 cut(s) 20, 307, 639, 751, 822
BstHHI GCGC 2 cut(s) 93, 690
BstKTI GATC 2 cut(s) 475, 923
BstMAI GTCTC 1 cut(s) 1018
BstMBI GATC 2 cut(s) 472, 920
BstMCI CGRYCG 1 cut(s) 148
BstNSI RCATGY 2 cut(s) 97, 355
BstSCI CCNGG 1 cut(s) 106
BstSFI CTRYAG 1 cut(s) 166
BstV1I GCAGC 6 cut(s) 485, 494, 643, 947, 950, 953
BstV2I GAAGAC 1 cut(s) 561
BstZ17I GTATAC 1 cut(s) 577
BstZI CGGCCG 1 cut(s) 145
BsuRI GGCC 2 cut(s) 147, 1010
BtgI CCRYGG 1 cut(s) 86
BtsCI GGATG 5 cut(s) 20, 307, 639, 751, 822
BtsIMutI CAGTG 5 cut(s) 33, 388, 590, 713, 747
BveI ACCTGC 1 cut(s) 716
Cac8I GCNNGC 5 cut(s) 173, 264, 304, 523, 723
CfoI GCGC 2 cut(s) 93, 690
Cfr10I RCCGGY 1 cut(s) 262
Csp6I GTAC 2 cut(s) 889, 961
CviAII CATG 6 cut(s) 87, 94, 137, 352, 400, 476
CviQI GTAC 2 cut(s) 889, 961
DdeI CTNAG 2 cut(s) 176, 380
DpnI GATC 2 cut(s) 474, 922
DpnII GATC 2 cut(s) 472, 920
EaeI YGGCCR 1 cut(s) 145
EagI CGGCCG 1 cut(s) 145
Eam1104I CTCTTC 1 cut(s) 559
EarI CTCTTC 1 cut(s) 559
EclXI CGGCCG 1 cut(s) 145
Eco130I CCWWGG 1 cut(s) 86
Eco24I GRGCYC 2 cut(s) 571, 737
Eco52I CGGCCG 1 cut(s) 145
Eco57I CTGAAG 1 cut(s) 57
Eco88I CYCGRG 1 cut(s) 570
EcoT14I CCWWGG 1 cut(s) 86
EcoT22I ATGCAT 1 cut(s) 481
EcoT38I GRGCYC 2 cut(s) 571, 737
ErhI CCWWGG 1 cut(s) 86
Esp3I CGTCTC 1 cut(s) 1018
FaeI CATG 6 cut(s) 90, 97, 140, 355, 403, 479
FaqI GGGAC 1 cut(s) 875
FatI CATG 6 cut(s) 86, 93, 136, 351, 399, 475
FauI CCCGC 1 cut(s) 581
FblI GTMKAC 1 cut(s) 576
Fnu4HI GCNGC 8 cut(s) 145, 499, 508, 657, 933, 936, 939, 942
FokI GGATG 5 cut(s) 7, 294, 626, 758, 829
FriOI GRGCYC 2 cut(s) 571, 737
Fsp4HI GCNGC 8 cut(s) 145, 499, 508, 657, 933, 936, 939, 942
FspBI CTAG 1 cut(s) 78
FspI TGCGCA 1 cut(s) 689
GlaI GCGC 2 cut(s) 92, 689
GluI GCNGC 8 cut(s) 145, 499, 508, 657, 933, 936, 939, 942
GsaI CCCAGC 1 cut(s) 993
HaeIII GGCC 2 cut(s) 147, 1010
HapII CCGG 5 cut(s) 108, 148, 263, 311, 1004
HhaI GCGC 2 cut(s) 93, 690
Hin1I GRCGYC 1 cut(s) 537
Hin1II CATG 6 cut(s) 90, 97, 140, 355, 403, 479
Hin6I GCGC 2 cut(s) 91, 688
HinP1I GCGC 2 cut(s) 91, 688
HindIII AAGCTT 1 cut(s) 300
HinfI GANTC 5 cut(s) 194, 458, 546, 836, 851
HpaII CCGG 5 cut(s) 108, 148, 263, 311, 1004
HphI GGTGA 2 cut(s) 189, 335
Hpy166II GTNNAC 4 cut(s) 33, 406, 577, 706
Hpy188I TCNGA 4 cut(s) 179, 755, 841, 901
Hpy188III TCNNGA 6 cut(s) 78, 251, 311, 332, 451, 1004
Hpy8I GTNNAC 4 cut(s) 33, 406, 577, 706
Hpy99I CGWCG 4 cut(s) 194, 218, 413, 1025
HpyAV CCTTC 2 cut(s) 210, 826
HpyCH4III ACNGT 2 cut(s) 518, 581
HpyCH4IV ACGT 2 cut(s) 537, 708
HpyCH4V TGCA 9 cut(s) 257, 351, 394, 464, 479, 501, 510, 639, 713
HpyF3I CTNAG 2 cut(s) 176, 380
HpySE526I ACGT 2 cut(s) 537, 708
Hsp92I GRCGYC 1 cut(s) 537
Hsp92II CATG 6 cut(s) 90, 97, 140, 355, 403, 479
HspAI GCGC 2 cut(s) 91, 688
Kpn2I TCCGGA 2 cut(s) 310, 1003
KroI GCCGGC 1 cut(s) 262
KroNI GCCGGC 1 cut(s) 264
Kzo9I GATC 2 cut(s) 472, 920
LguI GCTCTTC 1 cut(s) 559
LmnI GCTCC 1 cut(s) 591
Lsp1109I GCAGC 6 cut(s) 485, 494, 643, 947, 950, 953
LweI GCATC 3 cut(s) 244, 648, 708
MaeI CTAG 1 cut(s) 78
MaeII ACGT 2 cut(s) 537, 708
MaeIII GTNAC 2 cut(s) 383, 875
MalI GATC 2 cut(s) 474, 922
MbiI CCGCTC 1 cut(s) 932
MboI GATC 2 cut(s) 472, 920
MboII GAAGA 8 cut(s) 566, 576, 689, 832, 835, 838, 841, 960
MfeI CAATTG 1 cut(s) 615
MhlI GDGCHC 4 cut(s) 77, 381, 571, 737
MluCI AATT 7 cut(s) 8, 289, 343, 414, 615, 810, 895
MlyI GAGTC 2 cut(s) 188, 467
Mph1103I ATGCAT 1 cut(s) 481
MroI TCCGGA 2 cut(s) 310, 1003
MroNI GCCGGC 1 cut(s) 262
MslI CAYNNNNRTG 1 cut(s) 423
MspI CCGG 5 cut(s) 108, 148, 263, 311, 1004
MspR9I CCNGG 1 cut(s) 108
MunI CAATTG 1 cut(s) 615
NaeI GCCGGC 1 cut(s) 264
NciI CCSGG 1 cut(s) 108
NcoI CCATGG 1 cut(s) 86
NdeII GATC 2 cut(s) 472, 920
NgoMIV GCCGGC 1 cut(s) 262
NlaIII CATG 6 cut(s) 90, 97, 140, 355, 403, 479
NmuCI GTSAC 1 cut(s) 383
NsbI TGCGCA 1 cut(s) 689
NsiI ATGCAT 1 cut(s) 481
NspI RCATGY 2 cut(s) 97, 355
PciSI GCTCTTC 1 cut(s) 559
PdiI GCCGGC 1 cut(s) 264
PfeI GAWTC 3 cut(s) 546, 836, 851
PkrI GCNGC 8 cut(s) 146, 500, 509, 658, 934, 937, 940, 943
PleI GAGTC 2 cut(s) 188, 466
PpsI GAGTC 2 cut(s) 188, 466
PsiI TTATAA 1 cut(s) 288
Psp1406I AACGTT 1 cut(s) 708
PspFI CCCAGC 1 cut(s) 989
PsrI GAACNNNNNNTAC 2 cut(s) 588, 620
RsaI GTAC 2 cut(s) 890, 962
RsaNI GTAC 2 cut(s) 889, 961
RseI CAYNNNNRTG 1 cut(s) 423
SapI GCTCTTC 1 cut(s) 559
SatI GCNGC 8 cut(s) 145, 499, 508, 657, 933, 936, 939, 942
Sau3AI GATC 2 cut(s) 472, 920
ScaI AGTACT 1 cut(s) 962
SchI GAGTC 2 cut(s) 188, 467
ScrFI CCNGG 1 cut(s) 108
SduI GDGCHC 4 cut(s) 77, 381, 571, 737
SfaNI GCATC 3 cut(s) 244, 648, 708
SfcI CTRYAG 1 cut(s) 166
SmiMI CAYNNNNRTG 1 cut(s) 423
SmlI CTYRAG 3 cut(s) 44, 316, 964
SmoI CTYRAG 3 cut(s) 44, 316, 964
Sse9I AATT 7 cut(s) 8, 289, 343, 414, 615, 810, 895
SsiI CCGC 3 cut(s) 144, 588, 932
SspMI CTAG 1 cut(s) 78
StyD4I CCNGG 1 cut(s) 106
StyI CCWWGG 1 cut(s) 86
TaaI ACNGT 2 cut(s) 518, 581
TaiI ACGT 2 cut(s) 540, 711
TaqI TCGA 3 cut(s) 549, 675, 946
TasI AATT 7 cut(s) 8, 289, 343, 414, 615, 810, 895
TatI WGTACW 1 cut(s) 960
TauI GCSGC 2 cut(s) 147, 935
TfiI GAWTC 3 cut(s) 546, 836, 851
TscAI CASTG 5 cut(s) 40, 388, 590, 720, 747
TseFI GTSAC 1 cut(s) 383
TseI GCWGC 6 cut(s) 498, 507, 656, 935, 938, 941
Tsp45I GTSAC 1 cut(s) 383
TspDTI ATGAA 4 cut(s) 311, 346, 696, 833
TspGWI ACGGA 2 cut(s) 79, 223
TspRI CASTG 5 cut(s) 40, 388, 590, 720, 747
XapI RAATTY 2 cut(s) 414, 895
XbaI TCTAGA 1 cut(s) 77
XceI RCATGY 2 cut(s) 97, 355
XmiI GTMKAC 1 cut(s) 576
XspI CTAG 1 cut(s) 78
ZraI GACGTC 1 cut(s) 538
ZrmI AGTACT 1 cut(s) 962
Zsp2I ATGCAT 1 cut(s) 481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.