Belongs to the NPH3 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67900 AT1G67900 AT1G67900 AT1G67900 AT1G67900 AT1G67900 |
| fragaria_vesca | FvH4_4g25650 |
| malus_domestica | MD13G1100800.v1.1 MD16G1101200.v1.1 |
| prunus_persica | Prupe.1G245700_v2.0.a1 Prupe.1G245700_v2.0.a1 Prupe.1G245700_v2.0.a1 |
| pyrus_communis | pycom13g08810 pycom16g08570 |
| rosa_chinensis | RchiOBHm_Chr4g0433101 |
| rosa_laevigata | RLG00000006787 |
| rosa_multiflora | Rmu_sc0001190.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00374570 |
| rosa_rugosa | Rorug04G0265300 Rorug04G0265300 |
| rosa_samantha | Rh4AG319200 Rh4BG327400 Rh4CG342800 Rh4DG322600 |
| rosa_wichuraiana | Rw4G027750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 92, 369 |
| AccI | GTMKAC | 1 cut(s) | 1068 |
| AccII | CGCG | 1 cut(s) | 320 |
| AciI | CCGC | 4 cut(s) | 154, 318, 320, 1175 |
| AclWI | GGATC | 1 cut(s) | 28 |
| AcoI | YGGCCR | 1 cut(s) | 26 |
| AcsI | RAATTY | 2 cut(s) | 257, 1440 |
| AcuI | CTGAAG | 5 cut(s) | 93, 657, 1203, 1256, 1262 |
| AfaI | GTAC | 2 cut(s) | 326, 1876 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 529, 1510 |
| AflIII | ACRYGT | 1 cut(s) | 573 |
| AhlI | ACTAGT | 1 cut(s) | 905 |
| AjnI | CCWGG | 3 cut(s) | 554, 1628, 1706 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1829, 1861 |
| Alw21I | GWGCWC | 2 cut(s) | 173, 249 |
| Alw26I | GTCTC | 6 cut(s) | 70, 408, 1170, 1305, 1693, 1700 |
| AlwI | GGATC | 1 cut(s) | 28 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 166, 803, 821 |
| Ama87I | CYCGRG | 1 cut(s) | 1545 |
| AoxI | GGCC | 4 cut(s) | 26, 51, 1470, 1631 |
| ApeKI | GCWGC | 8 cut(s) | 157, 797, 896, 932, 1223, 1484, 1550, 1579 |
| ApoI | RAATTY | 2 cut(s) | 257, 1440 |
| AspLEI | GCGC | 1 cut(s) | 317 |
| AspS9I | GGNCC | 5 cut(s) | 466, 1137, 1519, 1710, 1860 |
| AsuHPI | GGTGA | 1 cut(s) | 271 |
| AvaI | CYCGRG | 1 cut(s) | 1545 |
| AvaII | GGWCC | 5 cut(s) | 466, 1137, 1519, 1710, 1860 |
| AxyI | CCTNAGG | 1 cut(s) | 599 |
| BaeGI | GKGCMC | 1 cut(s) | 1600 |
| BanII | GRGCYC | 2 cut(s) | 249, 1118 |
| BbsI | GAAGAC | 2 cut(s) | 645, 1752 |
| Bbv12I | GWGCWC | 2 cut(s) | 173, 249 |
| BbvCI | CCTCAGC | 1 cut(s) | 1326 |
| BbvI | GCAGC | 8 cut(s) | 144, 809, 883, 944, 1235, 1471, 1537, 1566 |
| BccI | CCATC | 3 cut(s) | 621, 1633, 1775 |
| BceAI | ACGGC | 1 cut(s) | 38 |
| BciT130I | CCWGG | 3 cut(s) | 556, 1630, 1708 |
| BcoDI | GTCTC | 6 cut(s) | 70, 408, 1170, 1305, 1693, 1700 |
| BcuI | ACTAGT | 1 cut(s) | 905 |
| BfaI | CTAG | 7 cut(s) | 906, 978, 1125, 1445, 1584, 1604, 1656 |
| BfmI | CTRYAG | 2 cut(s) | 158, 1369 |
| BmcAI | AGTACT | 1 cut(s) | 326 |
| Bme1390I | CCNGG | 3 cut(s) | 556, 1630, 1708 |
| Bme18I | GGWCC | 5 cut(s) | 466, 1137, 1519, 1710, 1860 |
| BmeT110I | CYCGRG | 1 cut(s) | 1545 |
| BmgT120I | GGNCC | 5 cut(s) | 466, 1137, 1519, 1710, 1860 |
| BmrFI | CCNGG | 3 cut(s) | 556, 1630, 1708 |
| BmrI | ACTGGG | 1 cut(s) | 219 |
| BmuI | ACTGGG | 1 cut(s) | 219 |
| BpiI | GAAGAC | 2 cut(s) | 645, 1752 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1150, 1182 |
| BpmI | CTGGAG | 1 cut(s) | 1620 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1326 |
| BpuEI | CTTGAG | 2 cut(s) | 395, 1376 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1266 |
| BsaI | GGTCTC | 2 cut(s) | 1170, 1700 |
| BsaJI | CCNNGG | 6 cut(s) | 318, 403, 469, 1133, 1554, 1706 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1114, 1144 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 529, 1510 |
| Bse1I | ACTGG | 3 cut(s) | 225, 881, 1881 |
| Bse21I | CCTNAGG | 1 cut(s) | 599 |
| Bse3DI | GCAATG | 2 cut(s) | 589, 1314 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1266 |
| BseBI | CCWGG | 3 cut(s) | 556, 1630, 1708 |
| BseDI | CCNNGG | 6 cut(s) | 318, 403, 469, 1133, 1554, 1706 |
| BseJI | GATNNNNATC | 1 cut(s) | 1266 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 529, 1510 |
| BseMI | GCAATG | 2 cut(s) | 589, 1314 |
| BseMII | CTCAG | 6 cut(s) | 39, 298, 330, 590, 1317, 1704 |
| BseNI | ACTGG | 3 cut(s) | 225, 881, 1881 |
| BseRI | GAGGAG | 1 cut(s) | 58 |
| BseSI | GKGCMC | 1 cut(s) | 1600 |
| BseXI | GCAGC | 8 cut(s) | 144, 809, 883, 944, 1235, 1471, 1537, 1566 |
| BsgI | GTGCAG | 2 cut(s) | 609, 1470 |
| Bsh1236I | CGCG | 1 cut(s) | 320 |
| BshFI | GGCC | 4 cut(s) | 28, 53, 1472, 1633 |
| BsiHKAI | GWGCWC | 2 cut(s) | 173, 249 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1545 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 529, 1510 |
| BsmAI | GTCTC | 6 cut(s) | 70, 408, 1170, 1305, 1693, 1700 |
| BsnI | GGCC | 4 cut(s) | 28, 53, 1472, 1633 |
| Bso31I | GGTCTC | 2 cut(s) | 1170, 1700 |
| BsoBI | CYCGRG | 1 cut(s) | 1545 |
| Bsp1286I | GDGCHC | 4 cut(s) | 173, 249, 1118, 1600 |
| Bsp143I | GATC | 5 cut(s) | 20, 85, 852, 1211, 1363 |
| Bsp19I | CCATGG | 1 cut(s) | 1554 |
| BspACI | CCGC | 4 cut(s) | 154, 318, 320, 1175 |
| BspANI | GGCC | 4 cut(s) | 28, 53, 1472, 1633 |
| BspCNI | CTCAG | 6 cut(s) | 40, 297, 331, 591, 1318, 1703 |
| BspFNI | CGCG | 1 cut(s) | 320 |
| BspMAI | CTGCAG | 1 cut(s) | 162 |
| BspPI | GGATC | 1 cut(s) | 28 |
| BspTNI | GGTCTC | 2 cut(s) | 1170, 1700 |
| BsrDI | GCAATG | 2 cut(s) | 589, 1314 |
| BsrI | ACTGG | 3 cut(s) | 225, 881, 1881 |
| BssECI | CCNNGG | 6 cut(s) | 318, 403, 469, 1133, 1554, 1706 |
| BssMI | GATC | 5 cut(s) | 20, 85, 852, 1211, 1363 |
| BssT1I | CCWWGG | 4 cut(s) | 403, 469, 1133, 1554 |
| Bst2UI | CCWGG | 3 cut(s) | 556, 1630, 1708 |
| Bst4CI | ACNGT | 1 cut(s) | 1012 |
| Bst6I | CTCTTC | 3 cut(s) | 964, 976, 1421 |
| BstC8I | GCNNGC | 8 cut(s) | 615, 1474, 1478, 1482, 1542, 1668, 1740, 1820 |
| BstDEI | CTNAG | 8 cut(s) | 48, 284, 339, 599, 874, 1326, 1508, 1690 |
| BstDSI | CCRYGG | 2 cut(s) | 318, 1554 |
| BstFNI | CGCG | 1 cut(s) | 320 |
| BstHHI | GCGC | 1 cut(s) | 317 |
| BstKTI | GATC | 5 cut(s) | 23, 88, 855, 1214, 1366 |
| BstMAI | GTCTC | 6 cut(s) | 70, 408, 1170, 1305, 1693, 1700 |
| BstMBI | GATC | 5 cut(s) | 20, 85, 852, 1211, 1363 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 163, 480, 610, 1550, 1556, 1604 |
| BstNI | CCWGG | 3 cut(s) | 556, 1630, 1708 |
| BstNSI | RCATGY | 3 cut(s) | 577, 1480, 1484 |
| BstSCI | CCNGG | 3 cut(s) | 554, 1628, 1706 |
| BstSFI | CTRYAG | 2 cut(s) | 158, 1369 |
| BstSLI | GKGCMC | 1 cut(s) | 1600 |
| BstUI | CGCG | 1 cut(s) | 320 |
| BstV1I | GCAGC | 8 cut(s) | 144, 809, 883, 944, 1235, 1471, 1537, 1566 |
| BstV2I | GAAGAC | 2 cut(s) | 645, 1752 |
| BstX2I | RGATCY | 1 cut(s) | 20 |
| BstYI | RGATCY | 1 cut(s) | 20 |
| Bsu36I | CCTNAGG | 1 cut(s) | 599 |
| BsuRI | GGCC | 4 cut(s) | 28, 53, 1472, 1633 |
| BtgI | CCRYGG | 2 cut(s) | 318, 1554 |
| BtsIMutI | CAGTG | 5 cut(s) | 232, 292, 888, 1021, 1888 |
| Cac8I | GCNNGC | 8 cut(s) | 615, 1474, 1478, 1482, 1542, 1668, 1740, 1820 |
| CaiI | CAGNNNCTG | 3 cut(s) | 166, 803, 821 |
| CfoI | GCGC | 1 cut(s) | 317 |
| Cfr13I | GGNCC | 5 cut(s) | 466, 1137, 1519, 1710, 1860 |
| Cfr42I | CCGCGG | 1 cut(s) | 321 |
| Csp6I | GTAC | 2 cut(s) | 325, 1875 |
| CviAII | CATG | 7 cut(s) | 215, 574, 679, 1358, 1477, 1481, 1555 |
| CviQI | GTAC | 2 cut(s) | 325, 1875 |
| DdeI | CTNAG | 8 cut(s) | 48, 284, 339, 599, 874, 1326, 1508, 1690 |
| DpnI | GATC | 5 cut(s) | 22, 87, 854, 1213, 1365 |
| DpnII | GATC | 5 cut(s) | 20, 85, 852, 1211, 1363 |
| EaeI | YGGCCR | 1 cut(s) | 26 |
| Eam1104I | CTCTTC | 3 cut(s) | 964, 976, 1421 |
| EarI | CTCTTC | 3 cut(s) | 964, 976, 1421 |
| Ecl136II | GAGCTC | 1 cut(s) | 247 |
| Eco130I | CCWWGG | 4 cut(s) | 403, 469, 1133, 1554 |
| Eco147I | AGGCCT | 2 cut(s) | 1472, 1633 |
| Eco24I | GRGCYC | 2 cut(s) | 249, 1118 |
| Eco31I | GGTCTC | 2 cut(s) | 1170, 1700 |
| Eco47I | GGWCC | 5 cut(s) | 466, 1137, 1519, 1710, 1860 |
| Eco53kI | GAGCTC | 1 cut(s) | 247 |
| Eco57I | CTGAAG | 5 cut(s) | 93, 657, 1203, 1256, 1262 |
| Eco81I | CCTNAGG | 1 cut(s) | 599 |
| Eco88I | CYCGRG | 1 cut(s) | 1545 |
| EcoICRI | GAGCTC | 1 cut(s) | 247 |
| EcoO109I | RGGNCCY | 1 cut(s) | 466 |
| EcoRI | GAATTC | 1 cut(s) | 1440 |
| EcoRII | CCWGG | 3 cut(s) | 554, 1628, 1706 |
| EcoT14I | CCWWGG | 4 cut(s) | 403, 469, 1133, 1554 |
| EcoT22I | ATGCAT | 4 cut(s) | 491, 733, 748, 1482 |
| EcoT38I | GRGCYC | 2 cut(s) | 249, 1118 |
| ErhI | CCWWGG | 4 cut(s) | 403, 469, 1133, 1554 |
| FaeI | CATG | 7 cut(s) | 218, 577, 682, 1361, 1480, 1484, 1558 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 521, 553, 1201, 1233 |
| FatI | CATG | 7 cut(s) | 214, 573, 678, 1357, 1476, 1480, 1554 |
| FauNDI | CATATG | 1 cut(s) | 1042 |
| FblI | GTMKAC | 1 cut(s) | 1068 |
| FriOI | GRGCYC | 2 cut(s) | 249, 1118 |
| FspBI | CTAG | 7 cut(s) | 906, 978, 1125, 1445, 1584, 1604, 1656 |
| GlaI | GCGC | 1 cut(s) | 316 |
| GsuI | CTGGAG | 1 cut(s) | 1620 |
| HaeIII | GGCC | 4 cut(s) | 28, 53, 1472, 1633 |
| HhaI | GCGC | 1 cut(s) | 317 |
| Hin1II | CATG | 7 cut(s) | 218, 577, 682, 1361, 1480, 1484, 1558 |
| Hin6I | GCGC | 1 cut(s) | 315 |
| HinP1I | GCGC | 1 cut(s) | 315 |
| HincII | GTYRAC | 1 cut(s) | 1722 |
| HindII | GTYRAC | 1 cut(s) | 1722 |
| HindIII | AAGCTT | 5 cut(s) | 186, 371, 871, 1142, 1253 |
| HinfI | GANTC | 6 cut(s) | 416, 806, 812, 818, 860, 1204 |
| HphI | GGTGA | 1 cut(s) | 271 |
| Hpy166II | GTNNAC | 3 cut(s) | 1069, 1722, 1863 |
| Hpy188I | TCNGA | 7 cut(s) | 73, 175, 463, 720, 805, 811, 817 |
| Hpy188III | TCNNGA | 7 cut(s) | 182, 309, 925, 1199, 1274, 1403, 1445 |
| Hpy8I | GTNNAC | 3 cut(s) | 1069, 1722, 1863 |
| HpyAV | CCTTC | 6 cut(s) | 97, 346, 534, 922, 1155, 1237 |
| HpyCH4III | ACNGT | 1 cut(s) | 1012 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 163, 480, 610, 1550, 1556, 1604 |
| HpyF3I | CTNAG | 8 cut(s) | 48, 284, 339, 599, 874, 1326, 1508, 1690 |
| Hsp92II | CATG | 7 cut(s) | 218, 577, 682, 1361, 1480, 1484, 1558 |
| HspAI | GCGC | 1 cut(s) | 315 |
| KspI | CCGCGG | 1 cut(s) | 321 |
| Kzo9I | GATC | 5 cut(s) | 20, 85, 852, 1211, 1363 |
| LmnI | GCTCC | 2 cut(s) | 216, 1090 |
| Lsp1109I | GCAGC | 8 cut(s) | 144, 809, 883, 944, 1235, 1471, 1537, 1566 |
| MaeI | CTAG | 7 cut(s) | 906, 978, 1125, 1445, 1584, 1604, 1656 |
| MaeIII | GTNAC | 3 cut(s) | 540, 1016, 1570 |
| MalI | GATC | 5 cut(s) | 22, 87, 854, 1213, 1365 |
| MboI | GATC | 5 cut(s) | 20, 85, 852, 1211, 1363 |
| MfeI | CAATTG | 5 cut(s) | 420, 498, 864, 1320, 1377 |
| MflI | RGATCY | 1 cut(s) | 20 |
| MhlI | GDGCHC | 4 cut(s) | 173, 249, 1118, 1600 |
| MlyI | GAGTC | 3 cut(s) | 410, 812, 1213 |
| MmeI | TCCRAC | 1 cut(s) | 967 |
| Mph1103I | ATGCAT | 4 cut(s) | 491, 733, 748, 1482 |
| MseI | TTAA | 5 cut(s) | 690, 833, 918, 945, 1646 |
| MslI | CAYNNNNRTG | 2 cut(s) | 751, 1076 |
| MspA1I | CMGCKG | 2 cut(s) | 320, 1175 |
| MspR9I | CCNGG | 3 cut(s) | 556, 1630, 1708 |
| MunI | CAATTG | 5 cut(s) | 420, 498, 864, 1320, 1377 |
| MvaI | CCWGG | 3 cut(s) | 556, 1630, 1708 |
| MvnI | CGCG | 1 cut(s) | 320 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 163, 480, 610, 1550, 1556, 1604 |
| NcoI | CCATGG | 1 cut(s) | 1554 |
| NdeI | CATATG | 1 cut(s) | 1042 |
| NdeII | GATC | 5 cut(s) | 20, 85, 852, 1211, 1363 |
| NlaIII | CATG | 7 cut(s) | 218, 577, 682, 1361, 1480, 1484, 1558 |
| NmeAIII | GCCGAG | 1 cut(s) | 4 |
| NmuCI | GTSAC | 3 cut(s) | 540, 1016, 1570 |
| NsiI | ATGCAT | 4 cut(s) | 491, 733, 748, 1482 |
| NspI | RCATGY | 3 cut(s) | 577, 1480, 1484 |
| PaeI | GCATGC | 2 cut(s) | 1480, 1484 |
| PaeR7I | CTCGAG | 1 cut(s) | 1545 |
| PceI | AGGCCT | 2 cut(s) | 1472, 1633 |
| PciI | ACATGT | 1 cut(s) | 573 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1746 |
| PfeI | GAWTC | 3 cut(s) | 806, 812, 860 |
| PfoI | TCCNGGA | 1 cut(s) | 554 |
| PleI | GAGTC | 3 cut(s) | 410, 812, 1212 |
| PpsI | GAGTC | 3 cut(s) | 410, 812, 1212 |
| PpuMI | RGGWCCY | 1 cut(s) | 466 |
| PscI | ACATGT | 1 cut(s) | 573 |
| PsiI | TTATAA | 2 cut(s) | 92, 369 |
| Psp124BI | GAGCTC | 1 cut(s) | 249 |
| Psp5II | RGGWCCY | 1 cut(s) | 466 |
| Psp6I | CCWGG | 3 cut(s) | 554, 1628, 1706 |
| PspGI | CCWGG | 3 cut(s) | 554, 1628, 1706 |
| PspPI | GGNCC | 5 cut(s) | 466, 1137, 1519, 1710, 1860 |
| PspPPI | RGGWCCY | 1 cut(s) | 466 |
| PspXI | VCTCGAGB | 1 cut(s) | 1545 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 861, 893 |
| PstI | CTGCAG | 1 cut(s) | 162 |
| PstNI | CAGNNNCTG | 3 cut(s) | 166, 803, 821 |
| PsuI | RGATCY | 1 cut(s) | 20 |
| RsaI | GTAC | 2 cut(s) | 326, 1876 |
| RsaNI | GTAC | 2 cut(s) | 325, 1875 |
| RseI | CAYNNNNRTG | 2 cut(s) | 751, 1076 |
| SacI | GAGCTC | 1 cut(s) | 249 |
| SacII | CCGCGG | 1 cut(s) | 321 |
| SaqAI | TTAA | 5 cut(s) | 690, 833, 918, 945, 1646 |
| Sau3AI | GATC | 5 cut(s) | 20, 85, 852, 1211, 1363 |
| Sau96I | GGNCC | 5 cut(s) | 466, 1137, 1519, 1710, 1860 |
| ScaI | AGTACT | 1 cut(s) | 326 |
| SchI | GAGTC | 3 cut(s) | 410, 812, 1213 |
| ScrFI | CCNGG | 3 cut(s) | 556, 1630, 1708 |
| SduI | GDGCHC | 4 cut(s) | 173, 249, 1118, 1600 |
| SfcI | CTRYAG | 2 cut(s) | 158, 1369 |
| Sfr274I | CTCGAG | 1 cut(s) | 1545 |
| Sfr303I | CCGCGG | 1 cut(s) | 321 |
| SgrBI | CCGCGG | 1 cut(s) | 321 |
| SinI | GGWCC | 5 cut(s) | 466, 1137, 1519, 1710, 1860 |
| SlaI | CTCGAG | 1 cut(s) | 1545 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 751, 1076 |
| SmlI | CTYRAG | 3 cut(s) | 374, 1391, 1545 |
| SmoI | CTYRAG | 3 cut(s) | 374, 1391, 1545 |
| SpeI | ACTAGT | 1 cut(s) | 905 |
| SphI | GCATGC | 2 cut(s) | 1480, 1484 |
| SseBI | AGGCCT | 2 cut(s) | 1472, 1633 |
| SsiI | CCGC | 4 cut(s) | 154, 318, 320, 1175 |
| SspMI | CTAG | 7 cut(s) | 906, 978, 1125, 1445, 1584, 1604, 1656 |
| SstI | GAGCTC | 1 cut(s) | 249 |
| StuI | AGGCCT | 2 cut(s) | 1472, 1633 |
| StyD4I | CCNGG | 3 cut(s) | 554, 1628, 1706 |
| StyI | CCWWGG | 4 cut(s) | 403, 469, 1133, 1554 |
| TaaI | ACNGT | 1 cut(s) | 1012 |
| TaqI | TCGA | 5 cut(s) | 310, 1057, 1207, 1438, 1546 |
| TaqII | GACCGA | 2 cut(s) | 1158, 1589 |
| TatI | WGTACW | 2 cut(s) | 324, 1874 |
| TauI | GCSGC | 2 cut(s) | 157, 320 |
| TfiI | GAWTC | 3 cut(s) | 806, 812, 860 |
| Tru1I | TTAA | 5 cut(s) | 690, 833, 918, 945, 1646 |
| Tru9I | TTAA | 5 cut(s) | 690, 833, 918, 945, 1646 |
| TscAI | CASTG | 5 cut(s) | 232, 292, 888, 1021, 1888 |
| TseFI | GTSAC | 3 cut(s) | 540, 1016, 1570 |
| TseI | GCWGC | 8 cut(s) | 157, 797, 896, 932, 1223, 1484, 1550, 1579 |
| Tsp45I | GTSAC | 3 cut(s) | 540, 1016, 1570 |
| TspDTI | ATGAA | 6 cut(s) | 17, 26, 1059, 1303, 1748, 1776 |
| TspRI | CASTG | 5 cut(s) | 232, 292, 888, 1021, 1888 |
| VpaK11BI | GGWCC | 5 cut(s) | 466, 1137, 1519, 1710, 1860 |
| XapI | RAATTY | 2 cut(s) | 257, 1440 |
| XbaI | TCTAGA | 1 cut(s) | 1444 |
| XceI | RCATGY | 3 cut(s) | 577, 1480, 1484 |
| XhoI | CTCGAG | 1 cut(s) | 1545 |
| XmiI | GTMKAC | 1 cut(s) | 1068 |
| XspI | CTAG | 7 cut(s) | 906, 978, 1125, 1445, 1584, 1604, 1656 |
| ZrmI | AGTACT | 1 cut(s) | 326 |
| Zsp2I | ATGCAT | 4 cut(s) | 491, 733, 748, 1482 |