No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G23965 AT1G23995 AT1G70270 AT1G70270 |
| malus_domestica | MD13G1089100.v1.1 MD16G1089300.v1.1 |
| prunus_persica | Prupe.1G256700_v2.0.a1 Prupe.1G256700_v2.0.a1 |
| pyrus_communis | pycom13g07750 pycom16g07640 |
| rosa_chinensis | RchiOBHm_Chr4g0444191 |
| rosa_laevigata | RLG00000020554 |
| rosa_roxburghii | Rroxscaffold_5G00384780 |
| rosa_rugosa | Rorug04G0350800 |
| rosa_samantha | Rh4AG411600 Rh4BG423000 Rh4CG437300 Rh4DG418300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 24 |
| AarI | CACCTGC | 1 cut(s) | 106 |
| Acc36I | ACCTGC | 1 cut(s) | 106 |
| AciI | CCGC | 3 cut(s) | 132, 136, 228 |
| AclI | AACGTT | 1 cut(s) | 264 |
| AcoI | YGGCCR | 1 cut(s) | 133 |
| AcuI | CTGAAG | 1 cut(s) | 227 |
| AfeI | AGCGCT | 1 cut(s) | 276 |
| AgsI | TTSAA | 3 cut(s) | 34, 202, 224 |
| AjnI | CCWGG | 1 cut(s) | 184 |
| AluBI | AGCT | 2 cut(s) | 169, 295 |
| AluI | AGCT | 2 cut(s) | 169, 295 |
| Aor51HI | AGCGCT | 1 cut(s) | 276 |
| AoxI | GGCC | 1 cut(s) | 133 |
| ApeKI | GCWGC | 1 cut(s) | 169 |
| AspLEI | GCGC | 1 cut(s) | 277 |
| AsuHPI | GGTGA | 1 cut(s) | 172 |
| BbvI | GCAGC | 1 cut(s) | 156 |
| BciT130I | CCWGG | 1 cut(s) | 186 |
| BfoI | RGCGCY | 1 cut(s) | 278 |
| BfuAI | ACCTGC | 1 cut(s) | 106 |
| BisI | GCNGC | 3 cut(s) | 133, 136, 170 |
| BlsI | GCNGC | 3 cut(s) | 134, 137, 171 |
| Bme1390I | CCNGG | 1 cut(s) | 186 |
| BmrFI | CCNGG | 1 cut(s) | 186 |
| Bse118I | RCCGGY | 1 cut(s) | 210 |
| BseBI | CCWGG | 1 cut(s) | 186 |
| BseMII | CTCAG | 1 cut(s) | 42 |
| BseRI | GAGGAG | 1 cut(s) | 106 |
| BseX3I | CGGCCG | 1 cut(s) | 133 |
| BseXI | GCAGC | 1 cut(s) | 156 |
| Bsh1285I | CGRYCG | 1 cut(s) | 136 |
| BshFI | GGCC | 1 cut(s) | 135 |
| BsiEI | CGRYCG | 1 cut(s) | 136 |
| BsiSI | CCGG | 1 cut(s) | 211 |
| BsmI | GAATGC | 1 cut(s) | 40 |
| BsnI | GGCC | 1 cut(s) | 135 |
| BspACI | CCGC | 3 cut(s) | 132, 136, 228 |
| BspANI | GGCC | 1 cut(s) | 135 |
| BspCNI | CTCAG | 1 cut(s) | 43 |
| BspMI | ACCTGC | 1 cut(s) | 106 |
| BsrFI | RCCGGY | 1 cut(s) | 210 |
| BssAI | RCCGGY | 1 cut(s) | 210 |
| Bst2UI | CCWGG | 1 cut(s) | 186 |
| Bst4CI | ACNGT | 1 cut(s) | 148 |
| BstC8I | GCNNGC | 1 cut(s) | 273 |
| BstDEI | CTNAG | 2 cut(s) | 51, 300 |
| BstH2I | RGCGCY | 1 cut(s) | 278 |
| BstHHI | GCGC | 1 cut(s) | 277 |
| BstMCI | CGRYCG | 1 cut(s) | 136 |
| BstNI | CCWGG | 1 cut(s) | 186 |
| BstSCI | CCNGG | 1 cut(s) | 184 |
| BstV1I | GCAGC | 1 cut(s) | 156 |
| BstZI | CGGCCG | 1 cut(s) | 133 |
| BsuRI | GGCC | 1 cut(s) | 135 |
| BveI | ACCTGC | 1 cut(s) | 106 |
| Cac8I | GCNNGC | 1 cut(s) | 273 |
| CciNI | GCGGCCGC | 1 cut(s) | 133 |
| CfoI | GCGC | 1 cut(s) | 277 |
| Cfr10I | RCCGGY | 1 cut(s) | 210 |
| CviJI | RGCY | 4 cut(s) | 135, 169, 214, 295 |
| CviKI_1 | RGCY | 4 cut(s) | 135, 169, 214, 295 |
| DdeI | CTNAG | 2 cut(s) | 51, 300 |
| EaeI | YGGCCR | 1 cut(s) | 133 |
| EagI | CGGCCG | 1 cut(s) | 133 |
| EclXI | CGGCCG | 1 cut(s) | 133 |
| Eco47III | AGCGCT | 1 cut(s) | 276 |
| Eco52I | CGGCCG | 1 cut(s) | 133 |
| Eco57I | CTGAAG | 1 cut(s) | 227 |
| EcoRII | CCWGG | 1 cut(s) | 184 |
| FaiI | YATR | 4 cut(s) | 14, 24, 237, 239 |
| Fnu4HI | GCNGC | 3 cut(s) | 133, 136, 170 |
| Fsp4HI | GCNGC | 3 cut(s) | 133, 136, 170 |
| GlaI | GCGC | 1 cut(s) | 276 |
| GluI | GCNGC | 3 cut(s) | 133, 136, 170 |
| HaeII | RGCGCY | 1 cut(s) | 278 |
| HaeIII | GGCC | 1 cut(s) | 135 |
| HapII | CCGG | 1 cut(s) | 211 |
| HhaI | GCGC | 1 cut(s) | 277 |
| Hin6I | GCGC | 1 cut(s) | 275 |
| HinP1I | GCGC | 1 cut(s) | 275 |
| HincII | GTYRAC | 2 cut(s) | 144, 262 |
| HindII | GTYRAC | 2 cut(s) | 144, 262 |
| HinfI | GANTC | 1 cut(s) | 181 |
| HpaI | GTTAAC | 1 cut(s) | 262 |
| HpaII | CCGG | 1 cut(s) | 211 |
| HphI | GGTGA | 1 cut(s) | 172 |
| Hpy166II | GTNNAC | 2 cut(s) | 144, 262 |
| Hpy188I | TCNGA | 1 cut(s) | 52 |
| Hpy8I | GTNNAC | 2 cut(s) | 144, 262 |
| HpyAV | CCTTC | 2 cut(s) | 151, 196 |
| HpyCH4III | ACNGT | 1 cut(s) | 148 |
| HpyCH4IV | ACGT | 1 cut(s) | 264 |
| HpyCH4V | TGCA | 4 cut(s) | 151, 172, 256, 271 |
| HpyF3I | CTNAG | 2 cut(s) | 51, 300 |
| HpySE526I | ACGT | 1 cut(s) | 264 |
| HspAI | GCGC | 1 cut(s) | 275 |
| KspAI | GTTAAC | 1 cut(s) | 262 |
| LpnPI | CCDG | 5 cut(s) | 91, 101, 171, 198, 224 |
| Lsp1109I | GCAGC | 1 cut(s) | 156 |
| MaeII | ACGT | 1 cut(s) | 264 |
| MboII | GAAGA | 9 cut(s) | 36, 39, 70, 76, 82, 88, 94, 175, 212 |
| MluCI | AATT | 2 cut(s) | 7, 19 |
| MnlI | CCTC | 7 cut(s) | 84, 87, 93, 105, 182, 188, 243 |
| MseI | TTAA | 1 cut(s) | 261 |
| MspI | CCGG | 1 cut(s) | 211 |
| MspR9I | CCNGG | 1 cut(s) | 186 |
| Mva1269I | GAATGC | 1 cut(s) | 40 |
| MvaI | CCWGG | 1 cut(s) | 186 |
| NotI | GCGGCCGC | 1 cut(s) | 133 |
| PaqCI | CACCTGC | 1 cut(s) | 106 |
| PctI | GAATGC | 1 cut(s) | 40 |
| PfeI | GAWTC | 1 cut(s) | 181 |
| PfoI | TCCNGGA | 1 cut(s) | 184 |
| PkrI | GCNGC | 3 cut(s) | 134, 137, 171 |
| PsiI | TTATAA | 1 cut(s) | 24 |
| Psp1406I | AACGTT | 1 cut(s) | 264 |
| Psp6I | CCWGG | 1 cut(s) | 184 |
| PspGI | CCWGG | 1 cut(s) | 184 |
| SaqAI | TTAA | 1 cut(s) | 261 |
| SatI | GCNGC | 3 cut(s) | 133, 136, 170 |
| ScrFI | CCNGG | 1 cut(s) | 186 |
| SetI | ASST | 6 cut(s) | 120, 162, 171, 254, 267, 297 |
| Sse9I | AATT | 2 cut(s) | 7, 19 |
| SsiI | CCGC | 3 cut(s) | 132, 136, 228 |
| StyD4I | CCNGG | 1 cut(s) | 184 |
| TaaI | ACNGT | 1 cut(s) | 148 |
| TaiI | ACGT | 1 cut(s) | 267 |
| TasI | AATT | 2 cut(s) | 7, 19 |
| TauI | GCSGC | 2 cut(s) | 135, 138 |
| TfiI | GAWTC | 1 cut(s) | 181 |
| Tru1I | TTAA | 1 cut(s) | 261 |
| Tru9I | TTAA | 1 cut(s) | 261 |
| TseI | GCWGC | 1 cut(s) | 169 |
| TspDTI | ATGAA | 6 cut(s) | 17, 71, 77, 83, 89, 95 |