Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0017902

Physical Location & Seq

Genomic Coordinates Forward (+)

31088533 .. 31089736

Gene Structure 1204 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G327000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 393 bp

ATGAGAGCTGCTTCTGCTGCTGCTGCTAGAGAAGGCCTACAAAGTAGTGGTGCGACAACAACAACAACAGGAGGAAGCAGACATGGGCGTGGTGAAGCTAGAAATTTTGCAATCTTCTTCTTCTGGGTCATTTTAATTTTTGCTCCAACAAGTAATTTGGTGGTTTCTGCCAGTAGAACCAGTATCAGTCATGGTGATGAGTTGGGTGGTGGCCGGTTCATGAGGTCACCGTCAAGGAAAACCCGTTTCCCAGGCAAGGTATCGTTTTATGCACCTTCAAGTACTCCATCTCATGATGTTCATCATTTTGTGGGGATCAACGGTGGTCCGGACAAGCTATATGGAGATGACAAGAGAATAGTTCATACAGGTCCAAATCCCCTTCACAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0007154 GO:0007267 GO:0008150 GO:0009987 GO:0023052 GO:0030154 GO:0032502 GO:0045165 GO:0045168 GO:0048046 GO:0048869

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

131

Amino Acids

13.88

Weight (kDa)

10.86

Isoelectric Point (pI)

38.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0017902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70895 AT1G70895 AT2G01505
malus_domestica	MD13G1023500.v1.1 MD16G1026400.v1.1
prunus_persica	Prupe.1G327000_v2.0.a1
pyrus_communis	pycom13g02210
rosa_chinensis	RchiOBHm_Chr4g0441591
rosa_roxburghii	Rroxscaffold_5G00382430
rosa_samantha	Rh4AG386200
rosa_wichuraiana	Rw4G033360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccIII	TCCGGA	1 cut(s)	328
AclWI	GGATC	1 cut(s)	323
AcoI	YGGCCR	1 cut(s)	211
AcsI	RAATTY	1 cut(s)	103
AfaI	GTAC	1 cut(s)	283
AfiI	CCNNNNNNNGG	1 cut(s)	256
AgsI	TTSAA	1 cut(s)	279
AjnI	CCWGG	1 cut(s)	250
AluBI	AGCT	3 cut(s)	8, 98, 337
AluI	AGCT	3 cut(s)	8, 98, 337
AlwI	GGATC	1 cut(s)	323
Aor13HI	TCCGGA	1 cut(s)	328
AoxI	GGCC	2 cut(s)	34, 211
ApeKI	GCWGC	4 cut(s)	8, 17, 20, 23
ApoI	RAATTY	1 cut(s)	103
AspS9I	GGNCC	2 cut(s)	326, 371
AsuHPI	GGTGA	3 cut(s)	104, 206, 219
AvaII	GGWCC	2 cut(s)	326, 371
BbvI	GCAGC	3 cut(s)	4, 7, 10
BccI	CCATC	1 cut(s)	295
BciT130I	CCWGG	1 cut(s)	252
BfaI	CTAG	2 cut(s)	27, 99
BisI	GCNGC	4 cut(s)	9, 18, 21, 24
BlsI	GCNGC	4 cut(s)	10, 19, 22, 25
BmcAI	AGTACT	1 cut(s)	283
Bme1390I	CCNGG	1 cut(s)	252
Bme18I	GGWCC	2 cut(s)	326, 371
BmgT120I	GGNCC	2 cut(s)	326, 371
BmrFI	CCNGG	1 cut(s)	252
BsaBI	GATNNNNATC	1 cut(s)	300
BsaJI	CCNNGG	1 cut(s)	250
BsaWI	WCCGGW	1 cut(s)	328
Bsc4I	CCNNNNNNNGG	1 cut(s)	256
Bse118I	RCCGGY	1 cut(s)	213
Bse1I	ACTGG	2 cut(s)	171, 180
Bse8I	GATNNNNATC	1 cut(s)	300
BseAI	TCCGGA	1 cut(s)	328
BseBI	CCWGG	1 cut(s)	252
BseDI	CCNNGG	1 cut(s)	250
BseJI	GATNNNNATC	1 cut(s)	300
BseLI	CCNNNNNNNGG	1 cut(s)	256
BseNI	ACTGG	2 cut(s)	171, 180
BseXI	GCAGC	3 cut(s)	4, 7, 10
BshFI	GGCC	2 cut(s)	36, 213
BsiSI	CCGG	2 cut(s)	214, 329
BslI	CCNNNNNNNGG	1 cut(s)	256
BsnI	GGCC	2 cut(s)	36, 213
Bsp13I	TCCGGA	1 cut(s)	328
Bsp143I	GATC	1 cut(s)	315
BspANI	GGCC	2 cut(s)	36, 213
BspEI	TCCGGA	1 cut(s)	328
BspHI	TCATGA	2 cut(s)	219, 292
BspPI	GGATC	1 cut(s)	323
BsrFI	RCCGGY	1 cut(s)	213
BsrI	ACTGG	2 cut(s)	171, 180
BssAI	RCCGGY	1 cut(s)	213
BssECI	CCNNGG	1 cut(s)	250
BssMI	GATC	1 cut(s)	315
Bst2UI	CCWGG	1 cut(s)	252
Bst4CI	ACNGT	2 cut(s)	231, 323
BstEII	GGTNACC	1 cut(s)	225
BstKTI	GATC	1 cut(s)	318
BstMBI	GATC	1 cut(s)	315
BstMWI	GCNNNNNNNGC	3 cut(s)	14, 17, 23
BstNI	CCWGG	1 cut(s)	252
BstPI	GGTNACC	1 cut(s)	225
BstSCI	CCNGG	1 cut(s)	250
BstV1I	GCAGC	3 cut(s)	4, 7, 10
BsuRI	GGCC	2 cut(s)	36, 213
CciI	TCATGA	2 cut(s)	219, 292
Cfr10I	RCCGGY	1 cut(s)	213
Cfr13I	GGNCC	2 cut(s)	326, 371
Csp6I	GTAC	1 cut(s)	282
CviAII	CATG	4 cut(s)	83, 191, 220, 293
CviJI	RGCY	5 cut(s)	8, 36, 98, 213, 337
CviKI_1	RGCY	5 cut(s)	8, 36, 98, 213, 337
CviQI	GTAC	1 cut(s)	282
DpnI	GATC	1 cut(s)	317
DpnII	GATC	1 cut(s)	315
EaeI	YGGCCR	1 cut(s)	211
Eco147I	AGGCCT	1 cut(s)	36
Eco47I	GGWCC	2 cut(s)	326, 371
Eco91I	GGTNACC	1 cut(s)	225
EcoO65I	GGTNACC	1 cut(s)	225
EcoRII	CCWGG	1 cut(s)	250
FaeI	CATG	4 cut(s)	86, 194, 223, 296
FaiI	YATR	8 cut(s)	84, 192, 221, 270, 294, 340, 342, 366
FatI	CATG	4 cut(s)	82, 190, 219, 292
Fnu4HI	GCNGC	4 cut(s)	9, 18, 21, 24
Fsp4HI	GCNGC	4 cut(s)	9, 18, 21, 24
FspBI	CTAG	2 cut(s)	27, 99
GluI	GCNGC	4 cut(s)	9, 18, 21, 24
HaeIII	GGCC	2 cut(s)	36, 213
HapII	CCGG	2 cut(s)	214, 329
Hin1II	CATG	4 cut(s)	86, 194, 223, 296
HpaII	CCGG	2 cut(s)	214, 329
HphI	GGTGA	3 cut(s)	104, 206, 219
Hpy188III	TCNNGA	3 cut(s)	220, 293, 329
HpyAV	CCTTC	3 cut(s)	26, 285, 392
HpyCH4III	ACNGT	2 cut(s)	231, 323
HpyCH4V	TGCA	2 cut(s)	110, 272
HpyF10VI	GCNNNNNNNGC	3 cut(s)	14, 17, 23
Hsp92II	CATG	4 cut(s)	86, 194, 223, 296
Kpn2I	TCCGGA	1 cut(s)	328
Kzo9I	GATC	1 cut(s)	315
LmnI	GCTCC	1 cut(s)	148
LpnPI	CCDG	9 cut(s)	54, 109, 184, 193, 227, 237, 264, 342, 354
Lsp1109I	GCAGC	3 cut(s)	4, 7, 10
MaeI	CTAG	2 cut(s)	27, 99
MaeIII	GTNAC	1 cut(s)	225
MalI	GATC	1 cut(s)	317
MboI	GATC	1 cut(s)	315
MboII	GAAGA	3 cut(s)	106, 109, 112
MluCI	AATT	3 cut(s)	103, 135, 154
MmeI	TCCRAC	1 cut(s)	170
MnlI	CCTC	2 cut(s)	65, 216
MroI	TCCGGA	1 cut(s)	328
MseI	TTAA	1 cut(s)	134
MslI	CAYNNNNRTG	2 cut(s)	87, 195
MspI	CCGG	2 cut(s)	214, 329
MspR9I	CCNGG	1 cut(s)	252
MvaI	CCWGG	1 cut(s)	252
MwoI	GCNNNNNNNGC	3 cut(s)	14, 17, 23
NdeII	GATC	1 cut(s)	315
NlaIII	CATG	4 cut(s)	86, 194, 223, 296
NmuCI	GTSAC	1 cut(s)	225
PagI	TCATGA	2 cut(s)	219, 292
PceI	AGGCCT	1 cut(s)	36
PkrI	GCNGC	4 cut(s)	10, 19, 22, 25
Psp6I	CCWGG	1 cut(s)	250
PspEI	GGTNACC	1 cut(s)	225
PspGI	CCWGG	1 cut(s)	250
PspPI	GGNCC	2 cut(s)	326, 371
RsaI	GTAC	1 cut(s)	283
RsaNI	GTAC	1 cut(s)	282
RseI	CAYNNNNRTG	2 cut(s)	87, 195
SaqAI	TTAA	1 cut(s)	134
SatI	GCNGC	4 cut(s)	9, 18, 21, 24
Sau3AI	GATC	1 cut(s)	315
Sau96I	GGNCC	2 cut(s)	326, 371
ScaI	AGTACT	1 cut(s)	283
ScrFI	CCNGG	1 cut(s)	252
SetI	ASST	7 cut(s)	10, 100, 227, 261, 277, 339, 373
SinI	GGWCC	2 cut(s)	326, 371
SmiMI	CAYNNNNRTG	2 cut(s)	87, 195
Sse9I	AATT	3 cut(s)	103, 135, 154
SseBI	AGGCCT	1 cut(s)	36
SspMI	CTAG	2 cut(s)	27, 99
StuI	AGGCCT	1 cut(s)	36
StyD4I	CCNGG	1 cut(s)	250
TaaI	ACNGT	2 cut(s)	231, 323
TasI	AATT	3 cut(s)	103, 135, 154
TatI	WGTACW	1 cut(s)	281
Tru1I	TTAA	1 cut(s)	134
Tru9I	TTAA	1 cut(s)	134
TseFI	GTSAC	1 cut(s)	225
TseI	GCWGC	4 cut(s)	8, 17, 20, 23
Tsp45I	GTSAC	1 cut(s)	225
TspDTI	ATGAA	3 cut(s)	208, 290, 353
VpaK11BI	GGWCC	2 cut(s)	326, 371
XapI	RAATTY	1 cut(s)	103
XspI	CTAG	2 cut(s)	27, 99
ZrmI	AGTACT	1 cut(s)	283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.