CLAVATA3 ESR (CLE)-related protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G70895 AT1G70895 AT2G01505 |
| malus_domestica | MD13G1023500.v1.1 MD16G1026400.v1.1 |
| prunus_persica | Prupe.1G327000_v2.0.a1 |
| pyrus_communis | pycom13g02210 |
| rosa_chinensis | RchiOBHm_Chr4g0441591 |
| rosa_roxburghii | Rroxscaffold_5G00382430 |
| rosa_samantha | Rh4AG386200 |
| rosa_wichuraiana | Rw4G033360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 140 |
| AcoI | YGGCCR | 1 cut(s) | 121 |
| AfaI | GTAC | 1 cut(s) | 193 |
| AluBI | AGCT | 2 cut(s) | 11, 247 |
| AluI | AGCT | 2 cut(s) | 11, 247 |
| Alw26I | GTCTC | 1 cut(s) | 175 |
| AoxI | GGCC | 1 cut(s) | 121 |
| AspS9I | GGNCC | 1 cut(s) | 281 |
| AvaII | GGWCC | 1 cut(s) | 281 |
| BauI | CACGAG | 1 cut(s) | 201 |
| BbsI | GAAGAC | 1 cut(s) | 264 |
| BccI | CCATC | 1 cut(s) | 205 |
| BceAI | ACGGC | 1 cut(s) | 268 |
| BciVI | GTATCC | 1 cut(s) | 230 |
| BcoDI | GTCTC | 1 cut(s) | 175 |
| BfaI | CTAG | 1 cut(s) | 301 |
| BfmI | CTRYAG | 1 cut(s) | 12 |
| BfuI | GTATCC | 1 cut(s) | 230 |
| BisI | GCNGC | 1 cut(s) | 140 |
| BlsI | GCNGC | 1 cut(s) | 141 |
| BmcAI | AGTACT | 1 cut(s) | 193 |
| Bme18I | GGWCC | 1 cut(s) | 281 |
| BmgT120I | GGNCC | 1 cut(s) | 281 |
| BpiI | GAAGAC | 1 cut(s) | 264 |
| BsaJI | CCNNGG | 1 cut(s) | 223 |
| Bse118I | RCCGGY | 1 cut(s) | 123 |
| Bse1I | ACTGG | 1 cut(s) | 124 |
| BseDI | CCNNGG | 1 cut(s) | 223 |
| BseNI | ACTGG | 1 cut(s) | 124 |
| BshFI | GGCC | 1 cut(s) | 123 |
| BsiSI | CCGG | 1 cut(s) | 124 |
| BsmAI | GTCTC | 1 cut(s) | 175 |
| BsnI | GGCC | 1 cut(s) | 123 |
| Bsp143I | GATC | 1 cut(s) | 5 |
| BspACI | CCGC | 1 cut(s) | 140 |
| BspANI | GGCC | 1 cut(s) | 123 |
| BsrFI | RCCGGY | 1 cut(s) | 123 |
| BsrI | ACTGG | 1 cut(s) | 124 |
| BssAI | RCCGGY | 1 cut(s) | 123 |
| BssECI | CCNNGG | 1 cut(s) | 223 |
| BssMI | GATC | 1 cut(s) | 5 |
| BssSI | CACGAG | 1 cut(s) | 201 |
| Bst2BI | CACGAG | 1 cut(s) | 201 |
| Bst4CI | ACNGT | 2 cut(s) | 186, 227 |
| BstDSI | CCRYGG | 1 cut(s) | 223 |
| BstKTI | GATC | 1 cut(s) | 8 |
| BstMAI | GTCTC | 1 cut(s) | 175 |
| BstMBI | GATC | 1 cut(s) | 5 |
| BstSFI | CTRYAG | 1 cut(s) | 12 |
| BstV2I | GAAGAC | 1 cut(s) | 264 |
| BsuI | GTATCC | 1 cut(s) | 230 |
| BsuRI | GGCC | 1 cut(s) | 123 |
| BtgI | CCRYGG | 1 cut(s) | 223 |
| Cfr10I | RCCGGY | 1 cut(s) | 123 |
| Cfr13I | GGNCC | 1 cut(s) | 281 |
| Csp6I | GTAC | 1 cut(s) | 192 |
| CviAII | CATG | 1 cut(s) | 179 |
| CviJI | RGCY | 4 cut(s) | 11, 113, 123, 247 |
| CviKI_1 | RGCY | 4 cut(s) | 11, 113, 123, 247 |
| CviQI | GTAC | 1 cut(s) | 192 |
| DpnI | GATC | 1 cut(s) | 7 |
| DpnII | GATC | 1 cut(s) | 5 |
| EaeI | YGGCCR | 1 cut(s) | 121 |
| Eco47I | GGWCC | 1 cut(s) | 281 |
| FaeI | CATG | 1 cut(s) | 182 |
| FaiI | YATR | 4 cut(s) | 87, 180, 250, 276 |
| FatI | CATG | 1 cut(s) | 178 |
| Fnu4HI | GCNGC | 1 cut(s) | 140 |
| Fsp4HI | GCNGC | 1 cut(s) | 140 |
| FspBI | CTAG | 1 cut(s) | 301 |
| GluI | GCNGC | 1 cut(s) | 140 |
| HaeIII | GGCC | 1 cut(s) | 123 |
| HapII | CCGG | 1 cut(s) | 124 |
| Hin1II | CATG | 1 cut(s) | 182 |
| HinfI | GANTC | 2 cut(s) | 107, 286 |
| HpaII | CCGG | 1 cut(s) | 124 |
| Hpy188I | TCNGA | 1 cut(s) | 285 |
| Hpy188III | TCNNGA | 3 cut(s) | 104, 161, 203 |
| Hpy99I | CGWCG | 1 cut(s) | 190 |
| HpyAV | CCTTC | 2 cut(s) | 11, 302 |
| HpyCH4III | ACNGT | 2 cut(s) | 186, 227 |
| HpyCH4IV | ACGT | 1 cut(s) | 154 |
| HpyCH4V | TGCA | 1 cut(s) | 182 |
| HpySE526I | ACGT | 1 cut(s) | 154 |
| Hsp92II | CATG | 1 cut(s) | 182 |
| Kzo9I | GATC | 1 cut(s) | 5 |
| LpnPI | CCDG | 6 cut(s) | 84, 89, 105, 137, 249, 264 |
| MaeI | CTAG | 1 cut(s) | 301 |
| MaeII | ACGT | 1 cut(s) | 154 |
| MalI | GATC | 1 cut(s) | 7 |
| MboI | GATC | 1 cut(s) | 5 |
| MboII | GAAGA | 1 cut(s) | 269 |
| MluCI | AATT | 3 cut(s) | 24, 48, 129 |
| MlyI | GAGTC | 1 cut(s) | 116 |
| MseI | TTAA | 2 cut(s) | 47, 128 |
| MspI | CCGG | 1 cut(s) | 124 |
| NdeII | GATC | 1 cut(s) | 5 |
| NlaIII | CATG | 1 cut(s) | 182 |
| NmeAIII | GCCGAG | 1 cut(s) | 168 |
| PfeI | GAWTC | 1 cut(s) | 286 |
| PflFI | GACNNNGTC | 1 cut(s) | 167 |
| PkrI | GCNGC | 1 cut(s) | 141 |
| PleI | GAGTC | 1 cut(s) | 115 |
| PpsI | GAGTC | 1 cut(s) | 115 |
| PspPI | GGNCC | 1 cut(s) | 281 |
| PsyI | GACNNNGTC | 1 cut(s) | 167 |
| RsaI | GTAC | 1 cut(s) | 193 |
| RsaNI | GTAC | 1 cut(s) | 192 |
| SaqAI | TTAA | 2 cut(s) | 47, 128 |
| SatI | GCNGC | 1 cut(s) | 140 |
| Sau3AI | GATC | 1 cut(s) | 5 |
| Sau96I | GGNCC | 1 cut(s) | 281 |
| ScaI | AGTACT | 1 cut(s) | 193 |
| SchI | GAGTC | 1 cut(s) | 116 |
| SetI | ASST | 5 cut(s) | 13, 22, 157, 249, 283 |
| SfcI | CTRYAG | 1 cut(s) | 12 |
| SinI | GGWCC | 1 cut(s) | 281 |
| Sse9I | AATT | 3 cut(s) | 24, 48, 129 |
| SsiI | CCGC | 1 cut(s) | 140 |
| SspMI | CTAG | 1 cut(s) | 301 |
| TaaI | ACNGT | 2 cut(s) | 186, 227 |
| TaiI | ACGT | 1 cut(s) | 157 |
| TaqI | TCGA | 1 cut(s) | 188 |
| TasI | AATT | 3 cut(s) | 24, 48, 129 |
| TatI | WGTACW | 1 cut(s) | 191 |
| TauI | GCSGC | 1 cut(s) | 142 |
| TfiI | GAWTC | 1 cut(s) | 286 |
| Tru1I | TTAA | 2 cut(s) | 47, 128 |
| Tru9I | TTAA | 2 cut(s) | 47, 128 |
| TspDTI | ATGAA | 1 cut(s) | 263 |
| Tth111I | GACNNNGTC | 1 cut(s) | 167 |
| VpaK11BI | GGWCC | 1 cut(s) | 281 |
| XspI | CTAG | 1 cut(s) | 301 |
| ZrmI | AGTACT | 1 cut(s) | 193 |