DNA binding domain with preference for A/T rich regions
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.1G379600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0301021 |
| rosa_laevigata | RLG00000011284 |
| rosa_multiflora | Rmu_sc0003168.1_g000008 Rmu_sc0024042.1_g000002 |
| rosa_rugosa | Rorug06G0300000 |
| rosa_samantha | Rh6CG428500 Rh6DG413900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 65 |
| AciI | CCGC | 1 cut(s) | 379 |
| AcuI | CTGAAG | 3 cut(s) | 72, 180, 225 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 65 |
| AgsI | TTSAA | 2 cut(s) | 215, 363 |
| AluBI | AGCT | 9 cut(s) | 34, 44, 50, 56, 191, 203, 350, 374, 405 |
| AluI | AGCT | 9 cut(s) | 34, 44, 50, 56, 191, 203, 350, 374, 405 |
| ApeKI | GCWGC | 8 cut(s) | 79, 82, 191, 194, 197, 200, 280, 355 |
| BbsI | GAAGAC | 1 cut(s) | 130 |
| BbvCI | CCTCAGC | 1 cut(s) | 96 |
| BbvI | GCAGC | 8 cut(s) | 91, 94, 178, 181, 184, 212, 292, 367 |
| BccI | CCATC | 1 cut(s) | 67 |
| BfaI | CTAG | 2 cut(s) | 351, 375 |
| BfmI | CTRYAG | 2 cut(s) | 45, 198 |
| BisI | GCNGC | 8 cut(s) | 80, 83, 192, 195, 198, 201, 281, 356 |
| BlsI | GCNGC | 8 cut(s) | 81, 84, 193, 196, 199, 202, 282, 357 |
| BpiI | GAAGAC | 1 cut(s) | 130 |
| BpmI | CTGGAG | 1 cut(s) | 87 |
| Bpu10I | CCTNAGC | 1 cut(s) | 96 |
| BsaBI | GATNNNNATC | 1 cut(s) | 252 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 65 |
| Bse1I | ACTGG | 1 cut(s) | 70 |
| Bse8I | GATNNNNATC | 1 cut(s) | 252 |
| BseGI | GGATG | 1 cut(s) | 253 |
| BseJI | GATNNNNATC | 1 cut(s) | 252 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 65 |
| BseMII | CTCAG | 3 cut(s) | 32, 110, 234 |
| BseNI | ACTGG | 1 cut(s) | 70 |
| BseRI | GAGGAG | 1 cut(s) | 336 |
| BseXI | GCAGC | 8 cut(s) | 91, 94, 178, 181, 184, 212, 292, 367 |
| BslFI | GGGAC | 1 cut(s) | 357 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 65 |
| BsmFI | GGGAC | 1 cut(s) | 357 |
| Bsp143I | GATC | 2 cut(s) | 135, 253 |
| BspACI | CCGC | 1 cut(s) | 379 |
| BspCNI | CTCAG | 3 cut(s) | 31, 109, 235 |
| BspMAI | CTGCAG | 1 cut(s) | 202 |
| BsrI | ACTGG | 1 cut(s) | 70 |
| BssMI | GATC | 2 cut(s) | 135, 253 |
| Bst4CI | ACNGT | 1 cut(s) | 222 |
| Bst6I | CTCTTC | 1 cut(s) | 333 |
| BstDEI | CTNAG | 3 cut(s) | 18, 96, 243 |
| BstF5I | GGATG | 1 cut(s) | 253 |
| BstKTI | GATC | 2 cut(s) | 138, 256 |
| BstMBI | GATC | 2 cut(s) | 135, 253 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 91, 197, 200 |
| BstSFI | CTRYAG | 2 cut(s) | 45, 198 |
| BstV1I | GCAGC | 8 cut(s) | 91, 94, 178, 181, 184, 212, 292, 367 |
| BstV2I | GAAGAC | 1 cut(s) | 130 |
| BtsCI | GGATG | 1 cut(s) | 253 |
| BtsIMutI | CAGTG | 2 cut(s) | 156, 240 |
| DdeI | CTNAG | 3 cut(s) | 18, 96, 243 |
| DpnI | GATC | 2 cut(s) | 137, 255 |
| DpnII | GATC | 2 cut(s) | 135, 253 |
| Eam1104I | CTCTTC | 1 cut(s) | 333 |
| EarI | CTCTTC | 1 cut(s) | 333 |
| EciI | GGCGGA | 1 cut(s) | 394 |
| Eco57I | CTGAAG | 3 cut(s) | 72, 180, 225 |
| FaiI | YATR | 2 cut(s) | 47, 105 |
| FaqI | GGGAC | 1 cut(s) | 357 |
| Fnu4HI | GCNGC | 8 cut(s) | 80, 83, 192, 195, 198, 201, 281, 356 |
| FokI | GGATG | 1 cut(s) | 260 |
| Fsp4HI | GCNGC | 8 cut(s) | 80, 83, 192, 195, 198, 201, 281, 356 |
| FspBI | CTAG | 2 cut(s) | 351, 375 |
| GluI | GCNGC | 8 cut(s) | 80, 83, 192, 195, 198, 201, 281, 356 |
| GsuI | CTGGAG | 1 cut(s) | 87 |
| Hpy188I | TCNGA | 1 cut(s) | 21 |
| Hpy188III | TCNNGA | 1 cut(s) | 363 |
| HpyAV | CCTTC | 3 cut(s) | 22, 68, 369 |
| HpyCH4III | ACNGT | 1 cut(s) | 222 |
| HpyCH4V | TGCA | 1 cut(s) | 200 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 91, 197, 200 |
| HpyF3I | CTNAG | 3 cut(s) | 18, 96, 243 |
| Kzo9I | GATC | 2 cut(s) | 135, 253 |
| LmnI | GCTCC | 2 cut(s) | 31, 61 |
| LpnPI | CCDG | 1 cut(s) | 51 |
| Lsp1109I | GCAGC | 8 cut(s) | 91, 94, 178, 181, 184, 212, 292, 367 |
| MaeI | CTAG | 2 cut(s) | 351, 375 |
| MalI | GATC | 2 cut(s) | 137, 255 |
| MboI | GATC | 2 cut(s) | 135, 253 |
| MspA1I | CMGCKG | 1 cut(s) | 203 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 91, 197, 200 |
| NdeII | GATC | 2 cut(s) | 135, 253 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 65 |
| PkrI | GCNGC | 8 cut(s) | 81, 84, 193, 196, 199, 202, 282, 357 |
| PstI | CTGCAG | 1 cut(s) | 202 |
| PvuII | CAGCTG | 1 cut(s) | 203 |
| SatI | GCNGC | 8 cut(s) | 80, 83, 192, 195, 198, 201, 281, 356 |
| Sau3AI | GATC | 2 cut(s) | 135, 253 |
| SfcI | CTRYAG | 2 cut(s) | 45, 198 |
| SsiI | CCGC | 1 cut(s) | 379 |
| SspMI | CTAG | 2 cut(s) | 351, 375 |
| TaaI | ACNGT | 1 cut(s) | 222 |
| TscAI | CASTG | 2 cut(s) | 163, 247 |
| TseI | GCWGC | 8 cut(s) | 79, 82, 191, 194, 197, 200, 280, 355 |
| TspDTI | ATGAA | 2 cut(s) | 87, 264 |
| TspRI | CASTG | 2 cut(s) | 163, 247 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 65 |
| XspI | CTAG | 2 cut(s) | 351, 375 |