Prupe.1G395300_v2.0.a1

Folate-Biopterin Transporter

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
35099710 .. 35102613
2904 bp
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UTR
Exon/CDS
Intron
Prupe.1G395300.1

Sequence Viewer

Length: 1533 bp
ATGCTCTCCATGGATCCCTCTCAAGAAACCAATATCATTGATCAAGCTACTTCAGACCAAAAAGATGATGATCATCATCATCGCCATTCAAACTCCACGAACCCATTTGCTCAAATGATCCAGCAACCCTTCCAATGGCTCCAAATGCTCTCTTCAGAACTCGACCCAACTTTTGTCTTGGGTGTGGTCATCGTCTATGGCCTCAGCCAAGGATTTTCAGGCTCTTATTTCAGAGTGGTCGCAGACTTCTACTGGAAAGATGTCCGGAAAGTCCAACCCTCAGTTGTGCAGCTCTACATAGGCTTGTACTACATCCCATGGGTCATGAAGCCCATTTGGGGCATATTGACTGACGTTTTTCCAGTTCAAGGCTATAGAAGACGACCCTATTTTGTGCTAGCAGGACTTACAGGGATCATTTCAGCCCTCATGGTTGCACTAAGTGACAGCTTGGCTGCTGCTGTGGCCTTGACTTGTTTGATTGGTGTCATGGCAAGTGTAGCGATTGCGGACGTGACGATTGATGCTTGTATTGCAAGGAATAGCATTGAGATCCGATGGTTGGCCTCGGATTTGCAGAGCCTTTGTGGGTTCTGCTCCTCTGCCGGAGCTTTGGTTGGGTACTCTACAAGTGGGTTTTTTGTTCACCATCTTGGTGCTCAGGGTGCATTGGGTCTTTTAGCAATCCCACCAGTCTTTCTGACTGTACTGGGCTTTGTTATATATGAAGAAGGATCAACAAGCCTTCGTTCTGTGAAAAAGAAGGTAGTAGAGGAAGTAGGAGTGGCAATAAGGGGCATGTACAGAACAATCAAATGTCCTCAGGTGTGGAAGCCTTCCCTTTACATGTACCTATCTTTGACTCTCAGCATTAGCACTCATGAAGGCCAGTTTTATTGGTACACTGACCCTACAGCTGGTCCTGCTTTCTCTCAGGAGTTTGTTGGGATGATATATGCAGTTGGTGCAATGGCTTCAATAGTAGGGGTTCTGATCTACCACAACACTCTAAAAGACTACCCCTTTAGAAACCTACTCTTCTTTGCTCAACTTCTCTACGCCATATCAGGCATGCTCGATCTCACATTCATCCTAAGGTGGAACTTAATTCTGGGCATTCCCGACTACTTCTTTGTCATCATGGAAGAATGCGTTTCTCGAATCGTTAGCAGAATTAGATGGATGCCCATGATCGTATTGAGCACAAGGCTTTGCCCTCTAGGCATTGAAGGCACATTTTTTGCACTGTTGATGTGCATTGACAGCCTTGGCTCACTGTCCTCTAAATGGGGTGGAGGGGTGGTTCTTCATGCCTTGAATGTCACAAGGACAGATTTTACAAACTTATGGCTGGTCATTCTCATTAGGAATGTGTTGAGGTTTTCAACACTTGCTTTGATATTTTTGGTTCCCAAGGCTGATCAATTTGATGTGTTGATTCCTTCTGATCTTTTGACCAAAACCTCTGCTGTTAGTGCTGTAGATGATGAGAGCTTGGAACTGGTTCCAATGAAGGAGAAAATTGAGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

511

Amino Acids

56.73

Weight (kDa)

5.86

Isoelectric Point (pI)

42.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021882)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10820
malus_domestica MD08G1055000.v1.1
prunus_persica Prupe.1G395300_v2.0.a1
pyrus_communis pycom08g04530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 264
AciI CCGC 1 cut(s) 509
AclWI GGATC 6 cut(s) 8, 21, 112, 422, 547, 742
AcuI CTGAAG 2 cut(s) 36, 138
AdeI CACNNNGTG 1 cut(s) 443
AfaI GTAC 6 cut(s) 308, 623, 708, 803, 851, 902
AfiI CCNNNNNNNGG 6 cut(s) 135, 338, 368, 562, 917, 1287
AflIII ACRYGT 1 cut(s) 846
AgsI TTSAA 6 cut(s) 90, 368, 978, 1229, 1318, 1386
AjiI CACGTC 1 cut(s) 514
AloI GAACNNNNNNTCC 2 cut(s) 1287, 1319
AluBI AGCT 6 cut(s) 47, 292, 450, 611, 917, 1494
AluI AGCT 6 cut(s) 47, 292, 450, 611, 917, 1494
Alw21I GWGCWC 2 cut(s) 661, 1205
AlwI GGATC 6 cut(s) 8, 21, 112, 422, 547, 742
Aor13HI TCCGGA 1 cut(s) 264
AoxI GGCC 4 cut(s) 199, 465, 564, 886
ApeKI GCWGC 3 cut(s) 289, 455, 458
ArsI GACNNNNNNTTYG 4 cut(s) 155, 187, 1115, 1147
Asp700I GAANNNNTTC 1 cut(s) 1503
AspS9I GGNCC 1 cut(s) 920
AsuHPI GGTGA 1 cut(s) 638
AsuNHI GCTAGC 1 cut(s) 397
AvaII GGWCC 1 cut(s) 920
AxyI CCTNAGG 2 cut(s) 822, 1094
BamHI GGATCC 1 cut(s) 13
BbsI GAAGAC 1 cut(s) 385
Bbv12I GWGCWC 2 cut(s) 661, 1205
BbvCI CCTCAGC 1 cut(s) 203
BbvI GCAGC 3 cut(s) 301, 442, 445
BccI CCATC 3 cut(s) 552, 657, 1173
BclI TGATCA 3 cut(s) 40, 70, 1420
BfaI CTAG 2 cut(s) 398, 1220
BfmI CTRYAG 3 cut(s) 373, 912, 1479
BglI GCCNNNNNGGC 1 cut(s) 1221
BisI GCNGC 3 cut(s) 290, 456, 459
BlsI GCNGC 3 cut(s) 291, 457, 460
Bme18I GGWCC 1 cut(s) 920
BmgBI CACGTC 1 cut(s) 514
BmgT120I GGNCC 1 cut(s) 920
BmiI GGNNCC 4 cut(s) 15, 140, 1410, 1506
BmrI ACTGGG 1 cut(s) 719
BmsI GCATC 2 cut(s) 514, 1173
BmtI GCTAGC 1 cut(s) 401
BmuI ACTGGG 1 cut(s) 719
BpiI GAAGAC 1 cut(s) 385
Bpu10I CCTNAGC 2 cut(s) 203, 660
BpuEI CTTGAG 1 cut(s) 6
BsaBI GATNNNNATC 3 cut(s) 69, 72, 75
BsaJI CCNNGG 6 cut(s) 9, 208, 317, 567, 1267, 1413
BsaWI WCCGGW 1 cut(s) 264
BsaXI ACNNNNNCTCC 4 cut(s) 600, 630, 1287, 1317
Bsc4I CCNNNNNNNGG 6 cut(s) 135, 338, 368, 562, 917, 1287
Bse1I ACTGG 6 cut(s) 257, 362, 692, 714, 889, 1506
Bse21I CCTNAGG 2 cut(s) 822, 1094
Bse3DI GCAATG 1 cut(s) 975
Bse8I GATNNNNATC 3 cut(s) 69, 72, 75
BseAI TCCGGA 1 cut(s) 264
BseDI CCNNGG 6 cut(s) 9, 208, 317, 567, 1267, 1413
BseGI GGATG 4 cut(s) 312, 954, 1089, 1188
BseJI GATNNNNATC 3 cut(s) 69, 72, 75
BseLI CCNNNNNNNGG 6 cut(s) 135, 338, 368, 562, 917, 1287
BseMI GCAATG 1 cut(s) 975
BseMII CTCAG 6 cut(s) 217, 294, 674, 836, 880, 947
BseNI ACTGG 6 cut(s) 257, 362, 692, 714, 889, 1506
BseRI GAGGAG 1 cut(s) 589
BseXI GCAGC 3 cut(s) 301, 442, 445
BsgI GTGCAG 1 cut(s) 308
BshFI GGCC 4 cut(s) 201, 467, 566, 888
BsiHKAI GWGCWC 2 cut(s) 661, 1205
BsiSI CCGG 2 cut(s) 265, 606
BslI CCNNNNNNNGG 6 cut(s) 135, 338, 368, 562, 917, 1287
BsmI GAATGC 2 cut(s) 1116, 1154
BsnI GGCC 4 cut(s) 201, 467, 566, 888
Bsp1286I GDGCHC 2 cut(s) 661, 1205
Bsp13I TCCGGA 1 cut(s) 264
Bsp1407I TGTACA 1 cut(s) 801
Bsp19I CCATGG 2 cut(s) 9, 317
BspACI CCGC 1 cut(s) 509
BspANI GGCC 4 cut(s) 201, 467, 566, 888
BspCNI CTCAG 6 cut(s) 216, 293, 673, 835, 879, 946
BspEI TCCGGA 1 cut(s) 264
BspHI TCATGA 2 cut(s) 324, 880
BspLI GGNNCC 4 cut(s) 15, 140, 1410, 1506
BspOI GCTAGC 1 cut(s) 401
BspPI GGATC 6 cut(s) 8, 21, 112, 422, 547, 742
BsrDI GCAATG 1 cut(s) 975
BsrGI TGTACA 1 cut(s) 801
BsrI ACTGG 6 cut(s) 257, 362, 692, 714, 889, 1506
BssECI CCNNGG 6 cut(s) 9, 208, 317, 567, 1267, 1413
BssT1I CCWWGG 5 cut(s) 9, 208, 317, 1267, 1413
Bst4CI ACNGT 3 cut(s) 706, 1248, 1278
Bst6I CTCTTC 2 cut(s) 157, 1043
BstAPI GCANNNNNTGC 1 cut(s) 965
BstAUI TGTACA 1 cut(s) 801
BstC8I GCNNGC 2 cut(s) 399, 1073
BstDEI CTNAG 8 cut(s) 203, 280, 440, 660, 822, 866, 933, 1094
BstDSI CCRYGG 2 cut(s) 9, 317
BstF5I GGATG 4 cut(s) 312, 954, 1089, 1188
BstNSI RCATGY 3 cut(s) 802, 850, 1075
BstSFI CTRYAG 3 cut(s) 373, 912, 1479
BstV1I GCAGC 3 cut(s) 301, 442, 445
BstV2I GAAGAC 1 cut(s) 385
BstX2I RGATCY 2 cut(s) 13, 552
BstYI RGATCY 2 cut(s) 13, 552
Bsu36I CCTNAGG 2 cut(s) 822, 1094
BsuRI GGCC 4 cut(s) 201, 467, 566, 888
BtgI CCRYGG 2 cut(s) 9, 317
BtgZI GCGATG 1 cut(s) 65
BtrI CACGTC 1 cut(s) 514
BtsCI GGATG 4 cut(s) 312, 954, 1089, 1188
BtsIMutI CAGTG 3 cut(s) 903, 1244, 1274
Cac8I GCNNGC 2 cut(s) 399, 1073
CciI TCATGA 2 cut(s) 324, 880
Cfr13I GGNCC 1 cut(s) 920
Csp6I GTAC 6 cut(s) 307, 622, 707, 802, 850, 901
CviQI GTAC 6 cut(s) 307, 622, 707, 802, 850, 901
DdeI CTNAG 8 cut(s) 203, 280, 440, 660, 822, 866, 933, 1094
DraIII CACNNNGTG 1 cut(s) 443
Eam1104I CTCTTC 2 cut(s) 157, 1043
EarI CTCTTC 2 cut(s) 157, 1043
Eco130I CCWWGG 5 cut(s) 9, 208, 317, 1267, 1413
Eco47I GGWCC 1 cut(s) 920
Eco57I CTGAAG 2 cut(s) 36, 138
Eco81I CCTNAGG 2 cut(s) 822, 1094
EcoT14I CCWWGG 5 cut(s) 9, 208, 317, 1267, 1413
ErhI CCWWGG 5 cut(s) 9, 208, 317, 1267, 1413
FbaI TGATCA 3 cut(s) 40, 70, 1420
Fnu4HI GCNGC 3 cut(s) 290, 456, 459
FokI GGATG 4 cut(s) 299, 961, 1076, 1195
Fsp4HI GCNGC 3 cut(s) 290, 456, 459
FspBI CTAG 2 cut(s) 398, 1220
GluI GCNGC 3 cut(s) 290, 456, 459
HaeIII GGCC 4 cut(s) 201, 467, 566, 888
HapII CCGG 2 cut(s) 265, 606
HinfI GANTC 3 cut(s) 862, 1161, 1438
HpaII CCGG 2 cut(s) 265, 606
HphI GGTGA 1 cut(s) 638
Hpy166II GTNNAC 2 cut(s) 646, 903
Hpy188I TCNGA 8 cut(s) 55, 157, 233, 557, 571, 702, 993, 1447
Hpy188III TCNNGA 7 cut(s) 23, 265, 325, 881, 935, 1121, 1158
Hpy8I GTNNAC 2 cut(s) 646, 903
HpyAV CCTTC 9 cut(s) 139, 725, 755, 757, 846, 878, 1223, 1452, 1507
HpyCH4III ACNGT 3 cut(s) 706, 1248, 1278
HpyCH4IV ACGT 2 cut(s) 354, 513
HpyCH4V TGCA 9 cut(s) 289, 437, 536, 577, 668, 959, 968, 1244, 1257
HpyF3I CTNAG 8 cut(s) 203, 280, 440, 660, 822, 866, 933, 1094
HpySE526I ACGT 2 cut(s) 354, 513
Kpn2I TCCGGA 1 cut(s) 264
Ksp22I TGATCA 3 cut(s) 40, 70, 1420
LmnI GCTCC 3 cut(s) 144, 602, 608
Lsp1109I GCAGC 3 cut(s) 301, 442, 445
LweI GCATC 2 cut(s) 514, 1173
MaeI CTAG 2 cut(s) 398, 1220
MaeII ACGT 2 cut(s) 354, 513
MaeIII GTNAC 3 cut(s) 443, 514, 1321
MboII GAAGA 6 cut(s) 144, 390, 740, 1030, 1157, 1298
MflI RGATCY 2 cut(s) 13, 552
MhlI GDGCHC 2 cut(s) 661, 1205
MluCI AATT 4 cut(s) 1107, 1173, 1424, 1521
MlyI GAGTC 1 cut(s) 856
MmeI TCCRAC 1 cut(s) 298
MroI TCCGGA 1 cut(s) 264
MroXI GAANNNNTTC 1 cut(s) 1503
MseI TTAA 1 cut(s) 1106
MslI CAYNNNNRTG 1 cut(s) 654
MspA1I CMGCKG 1 cut(s) 917
MspI CCGG 2 cut(s) 265, 606
Mva1269I GAATGC 2 cut(s) 1116, 1154
NcoI CCATGG 2 cut(s) 9, 317
NheI GCTAGC 1 cut(s) 397
NlaIV GGNNCC 4 cut(s) 15, 140, 1410, 1506
NmuCI GTSAC 3 cut(s) 443, 514, 1321
NspI RCATGY 3 cut(s) 802, 850, 1075
PaeI GCATGC 1 cut(s) 1075
PagI TCATGA 2 cut(s) 324, 880
PciI ACATGT 1 cut(s) 846
PctI GAATGC 2 cut(s) 1116, 1154
PdmI GAANNNNTTC 1 cut(s) 1503
PfeI GAWTC 2 cut(s) 1161, 1438
PkrI GCNGC 3 cut(s) 291, 457, 460
PleI GAGTC 1 cut(s) 856
PpsI GAGTC 1 cut(s) 856
PscI ACATGT 1 cut(s) 846
PspN4I GGNNCC 4 cut(s) 15, 140, 1410, 1506
PspPI GGNCC 1 cut(s) 920
PsuI RGATCY 2 cut(s) 13, 552
PvuII CAGCTG 1 cut(s) 917
RsaI GTAC 6 cut(s) 308, 623, 708, 803, 851, 902
RsaNI GTAC 6 cut(s) 307, 622, 707, 802, 850, 901
RseI CAYNNNNRTG 1 cut(s) 654
SaqAI TTAA 1 cut(s) 1106
SatI GCNGC 3 cut(s) 290, 456, 459
Sau96I GGNCC 1 cut(s) 920
SchI GAGTC 1 cut(s) 856
SduI GDGCHC 2 cut(s) 661, 1205
SfaNI GCATC 2 cut(s) 514, 1173
SfcI CTRYAG 3 cut(s) 373, 912, 1479
SinI GGWCC 1 cut(s) 920
SmiMI CAYNNNNRTG 1 cut(s) 654
SmlI CTYRAG 1 cut(s) 21
SmoI CTYRAG 1 cut(s) 21
SphI GCATGC 1 cut(s) 1075
Sse9I AATT 4 cut(s) 1107, 1173, 1424, 1521
SsiI CCGC 1 cut(s) 509
SspMI CTAG 2 cut(s) 398, 1220
StyI CCWWGG 5 cut(s) 9, 208, 317, 1267, 1413
TaaI ACNGT 3 cut(s) 706, 1248, 1278
TaiI ACGT 2 cut(s) 357, 516
TaqI TCGA 3 cut(s) 162, 1077, 1159
TasI AATT 4 cut(s) 1107, 1173, 1424, 1521
TatI WGTACW 3 cut(s) 306, 706, 801
TfiI GAWTC 2 cut(s) 1161, 1438
Tru1I TTAA 1 cut(s) 1106
Tru9I TTAA 1 cut(s) 1106
TscAI CASTG 3 cut(s) 910, 1251, 1281
TseFI GTSAC 3 cut(s) 443, 514, 1321
TseI GCWGC 3 cut(s) 289, 455, 458
Tsp45I GTSAC 3 cut(s) 443, 514, 1321
TspDTI ATGAA 6 cut(s) 341, 741, 897, 1078, 1298, 1526
TspRI CASTG 3 cut(s) 910, 1251, 1281
VpaK11BI GGWCC 1 cut(s) 920
XceI RCATGY 3 cut(s) 802, 850, 1075
XmnI GAANNNNTTC 1 cut(s) 1503
XspI CTAG 2 cut(s) 398, 1220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.