Prupe.1G544200_v2.0.a1

Tubulin-specific chaperone

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
44475228 .. 44485510
10283 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G544200.1

Sequence Viewer

Length: 1620 bp
ATGCAAGAATCATCCGAGTCAAAGCCTGACTTCAGAATCGGGCAGCGAGTCCACTCATCAGGTGATCCACGTCGAATTGGGACAGTGAGGTATGTGGGACCTGTCCAAGGCTATTCGGGCACATGGGTCGGAGTTGATTGGGACAATGGAGAGGGCAAGCACGATGGGACCATCAATGGGGTTCAATACTTCCAGGCAAGGTCCGAACAATCCGGGTCTTTTGTTCGGTCCCAGAATCTCAGCTCTGGCATTTCGTTGTTGCAAGCTCTTCAGCTCAGATACCGAGGTGACACGACTAAAGAAGAAGAGGATGAAATGTATGTCCTTTCAGCGAGCAACAAGCGTGTAAATGTTCAACTTGTTGGCAAAGAAAAAATTCAAGACAAGCTAAGTCGATTAGAGGAGTTGACGAGTGCATCGGTATCTTATTTGGGTGTTAGCTCTCCTGGAGTCCCATGTGATATCAGTACTAATGTGCCTAATTTAAAGGAGCTTGACTTGACTGGAAATCTAATTTCAGAATGGAAGGATGTTAGCACAATCTGTGAACAATTGGCAGATCTTTTTGCCCTCAATTTATCTTACAACTTAATGGCACACGATATGGTTGGGTTGCCACATTTAAAACGCATCCGCATTTTAGTGTTAAACAATATTGGCATAAATTGGACCCAGGTTGAAATACTCAAACAGTCCTTGCCAGAAATTGAAGAACTACATCTGATGGGGAATAAAATAAGCACAATAGAGCCTGCATCATCTTTTGCAGTTCTGGGATTTGATTATTTGCGCCTTCTGAATTTGGAAGACAATTGTATAGCTGATTGGAATGAAATCTTGAAACTTTCACAGCTAAGAAGCTTGGAGCAGCTTCATTTGAGCAATAACAGTTTGATTCGAGTCTTTTATCCTGATGACGGAATGATGCATGAACTGCTAAATGGTTATGACTCATGTGAGGAAAGCCATAAGCCATTTCAGAATTTGCGTTGCCTTCTTCTTGGTGGCAACAACATCGAGGATCTGGCCTCTATTGATTCGCTAAACTCATTCCCACAACTAGTGGATATCAGGCTTTCTGAGAATCCAGTGGCTGATCCTGGACAAGGTGGAATCCCACGATTTGTTTTGGTTGCCCGTTTAGCTAAAGTTGAAATGTTGAATGGGAGTGAGGTTAGTTCTCGTGAAAGAAAAGAGTCAGAGATTCGGTATGTCCGATTAGTTATGTCAAAAATGCAAGGAAATAGCAAAGAACTCCAGTGGCTTCATCCTAGGTTTGCGGAGCTTAAGGGTTTTCATGGAATTGAAGATGAAAAGCCATTAGTTGGAGCAGCAGGCCCTCAGAAAATGGCTTCAGGACTTCTATCTATTACCCTGAAATGTGTGGGAGCATCTATTGGTGAGAAGCCGTCACTGACGAAGAAACTCCCAGGCGCCACAACGGTTGGTAAGCTAAAAATTCTTTGTGAAAGCTTTTTCAAGCTGAAGTCTATCAAGCTGAAATTGTTTCTTCAAGAAGAGGGTTCTCCTTTGCCAATGTTGCTTGATGATGAAATGGCAACTTTAACGGACCTTGGGATTGGCAATGAATCAACCATTCTTGTAGATGAAGAGAGTTAA

Protein Analysis

540

Amino Acids

59.83

Weight (kDa)

5.26

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1433
AccB7I CCANNNNNTGG 1 cut(s) 1325
AciI CCGC 2 cut(s) 634, 1280
AclWI GGATC 3 cut(s) 59, 1029, 1091
AcsI RAATTY 4 cut(s) 375, 799, 982, 1458
AcuI CTGAAG 4 cut(s) 16, 254, 1338, 1505
AcyI GRCGYC 1 cut(s) 1434
AfaI GTAC 1 cut(s) 469
AfiI CCNNNNNNNGG 5 cut(s) 107, 177, 917, 1106, 1325
AflII CTTAAG 1 cut(s) 1286
AhlI ACTAGT 1 cut(s) 1060
AjiI CACGTC 1 cut(s) 71
AjnI CCWGG 5 cut(s) 192, 445, 672, 1099, 1429
AlwI GGATC 3 cut(s) 59, 1029, 1091
AlwNI CAGNNNCTG 1 cut(s) 1094
AoxI GGCC 2 cut(s) 1026, 1336
ApeKI GCWGC 3 cut(s) 43, 868, 1331
ApoI RAATTY 4 cut(s) 375, 799, 982, 1458
Asp700I GAANNNNTTC 1 cut(s) 375
AspA2I CCTAGG 1 cut(s) 1271
AspLEI GCGC 2 cut(s) 792, 1436
AspS9I GGNCC 7 cut(s) 98, 168, 201, 228, 669, 1337, 1570
AsuC2I CCSGG 1 cut(s) 214
AsuHPI GGTGA 3 cut(s) 74, 299, 1412
AvaII GGWCC 6 cut(s) 98, 168, 201, 228, 669, 1570
AvrII CCTAGG 1 cut(s) 1271
BaeGI GKGCMC 1 cut(s) 122
BaeI ACNNNNGTAYC 2 cut(s) 271, 304
BanI GGYRCC 1 cut(s) 1433
BauI CACGAG 1 cut(s) 1182
BbsI GAAGAC 1 cut(s) 813
BbvI GCAGC 3 cut(s) 55, 880, 1343
BccI CCATC 3 cut(s) 158, 179, 718
BceAI ACGGC 1 cut(s) 1393
BcgI CGANNNNNNTGC 4 cut(s) 109, 143, 997, 1031
BciT130I CCWGG 5 cut(s) 194, 447, 674, 1101, 1431
BcnI CCSGG 1 cut(s) 214
BcuI ACTAGT 1 cut(s) 1060
BfaI CTAG 2 cut(s) 1061, 1272
BfoI RGCGCY 1 cut(s) 1437
BfrI CTTAAG 1 cut(s) 1286
BglII AGATCT 1 cut(s) 559
BisI GCNGC 3 cut(s) 44, 869, 1332
BlnI CCTAGG 1 cut(s) 1271
BlsI GCNGC 3 cut(s) 45, 870, 1333
BmcAI AGTACT 1 cut(s) 469
Bme1390I CCNGG 6 cut(s) 194, 214, 447, 674, 1101, 1431
Bme18I GGWCC 6 cut(s) 98, 168, 201, 228, 669, 1570
BmgBI CACGTC 1 cut(s) 71
BmgT120I GGNCC 7 cut(s) 98, 168, 201, 228, 669, 1337, 1570
BmiI GGNNCC 5 cut(s) 99, 169, 230, 671, 1435
BmrFI CCNGG 6 cut(s) 194, 214, 447, 674, 1101, 1431
BmsI GCATC 5 cut(s) 425, 639, 764, 915, 1400
BpiI GAAGAC 1 cut(s) 813
BpmI CTGGAG 2 cut(s) 468, 1241
BpuMI CCSGG 1 cut(s) 214
BsaHI GRCGYC 1 cut(s) 1434
BsaJI CCNNGG 6 cut(s) 106, 283, 672, 1271, 1429, 1573
Bsc4I CCNNNNNNNGG 5 cut(s) 107, 177, 917, 1106, 1325
Bse1I ACTGG 3 cut(s) 508, 1088, 1258
Bse3DI GCAATG 1 cut(s) 1591
BseBI CCWGG 5 cut(s) 194, 447, 674, 1101, 1431
BseDI CCNNGG 6 cut(s) 106, 283, 672, 1271, 1429, 1573
BseGI GGATG 5 cut(s) 11, 316, 535, 630, 1267
BseLI CCNNNNNNNGG 5 cut(s) 107, 177, 917, 1106, 1325
BseMI GCAATG 1 cut(s) 1591
BseMII CTCAG 4 cut(s) 253, 289, 1071, 1355
BseNI ACTGG 3 cut(s) 508, 1088, 1258
BseRI GAGGAG 1 cut(s) 416
BseSI GKGCMC 1 cut(s) 122
BseXI GCAGC 3 cut(s) 55, 880, 1343
BshFI GGCC 2 cut(s) 1028, 1338
BshNI GGYRCC 1 cut(s) 1433
BsiSI CCGG 1 cut(s) 213
BslFI GGGAC 6 cut(s) 94, 111, 155, 181, 214, 437
BslI CCNNNNNNNGG 5 cut(s) 107, 177, 917, 1106, 1325
BsmFI GGGAC 6 cut(s) 94, 111, 155, 181, 214, 437
BsnI GGCC 2 cut(s) 1028, 1338
Bsp1286I GDGCHC 1 cut(s) 122
Bsp143I GATC 4 cut(s) 64, 559, 1021, 1096
BspACI CCGC 2 cut(s) 634, 1280
BspANI GGCC 2 cut(s) 1028, 1338
BspCNI CTCAG 4 cut(s) 252, 288, 1072, 1354
BspLI GGNNCC 5 cut(s) 99, 169, 230, 671, 1435
BspPI GGATC 3 cut(s) 59, 1029, 1091
BspQI GCTCTTC 1 cut(s) 273
BspT107I GGYRCC 1 cut(s) 1433
BspTI CTTAAG 1 cut(s) 1286
BsrDI GCAATG 1 cut(s) 1591
BsrI ACTGG 3 cut(s) 508, 1088, 1258
BssECI CCNNGG 6 cut(s) 106, 283, 672, 1271, 1429, 1573
BssMI GATC 4 cut(s) 64, 559, 1021, 1096
BssNI GRCGYC 1 cut(s) 1434
BssSI CACGAG 1 cut(s) 1182
BssT1I CCWWGG 3 cut(s) 106, 1271, 1573
Bst2BI CACGAG 1 cut(s) 1182
Bst2UI CCWGG 5 cut(s) 194, 447, 674, 1101, 1431
Bst4CI ACNGT 4 cut(s) 85, 693, 890, 1444
Bst6I CTCTTC 4 cut(s) 273, 300, 1512, 1605
BstACI GRCGYC 1 cut(s) 1434
BstAFI CTTAAG 1 cut(s) 1286
BstAPI GCANNNNNTGC 1 cut(s) 934
BstC8I GCNNGC 5 cut(s) 158, 264, 334, 753, 1336
BstDEI CTNAG 6 cut(s) 239, 275, 389, 854, 1080, 1341
BstENI CCTNNNNNAGG 2 cut(s) 105, 1104
BstF5I GGATG 5 cut(s) 11, 316, 535, 630, 1267
BstH2I RGCGCY 1 cut(s) 1437
BstHHI GCGC 2 cut(s) 792, 1436
BstKTI GATC 4 cut(s) 67, 562, 1024, 1099
BstMBI GATC 4 cut(s) 64, 559, 1021, 1096
BstMWI GCNNNNNNNGC 4 cut(s) 117, 934, 1142, 1540
BstNI CCWGG 5 cut(s) 194, 447, 674, 1101, 1431
BstSCI CCNGG 6 cut(s) 192, 212, 445, 672, 1099, 1429
BstSLI GKGCMC 1 cut(s) 122
BstV1I GCAGC 3 cut(s) 55, 880, 1343
BstV2I GAAGAC 1 cut(s) 813
BstX2I RGATCY 2 cut(s) 559, 1021
BstYI RGATCY 2 cut(s) 559, 1021
BsuRI GGCC 2 cut(s) 1028, 1338
BtrI CACGTC 1 cut(s) 71
BtsCI GGATG 5 cut(s) 11, 316, 535, 630, 1267
BtsIMutI CAGTG 4 cut(s) 90, 1095, 1265, 1412
Cac8I GCNNGC 5 cut(s) 158, 264, 334, 753, 1336
CaiI CAGNNNCTG 1 cut(s) 1094
CfoI GCGC 2 cut(s) 792, 1436
Cfr13I GGNCC 7 cut(s) 98, 168, 201, 228, 669, 1337, 1570
Csp6I GTAC 1 cut(s) 468
CspCI CAANNNNNGTGG 2 cut(s) 1426, 1461
CviAII CATG 5 cut(s) 123, 456, 929, 954, 1298
CviQI GTAC 1 cut(s) 468
DdeI CTNAG 6 cut(s) 239, 275, 389, 854, 1080, 1341
DinI GGCGCC 1 cut(s) 1435
DpnI GATC 4 cut(s) 66, 561, 1023, 1098
DpnII GATC 4 cut(s) 64, 559, 1021, 1096
DraI TTTAAA 2 cut(s) 486, 624
Eam1104I CTCTTC 4 cut(s) 273, 300, 1512, 1605
EarI CTCTTC 4 cut(s) 273, 300, 1512, 1605
Eco130I CCWWGG 3 cut(s) 106, 1271, 1573
Eco32I GATATC 2 cut(s) 463, 1069
Eco47I GGWCC 6 cut(s) 98, 168, 201, 228, 669, 1570
Eco57I CTGAAG 4 cut(s) 16, 254, 1338, 1505
EcoNI CCTNNNNNAGG 2 cut(s) 105, 1104
EcoO109I RGGNCCY 2 cut(s) 98, 1337
EcoRII CCWGG 5 cut(s) 192, 445, 672, 1099, 1429
EcoRV GATATC 2 cut(s) 463, 1069
EcoT14I CCWWGG 3 cut(s) 106, 1271, 1573
EcoT22I ATGCAT 1 cut(s) 930
EgeI GGCGCC 1 cut(s) 1435
EheI GGCGCC 1 cut(s) 1435
ErhI CCWWGG 3 cut(s) 106, 1271, 1573
FaeI CATG 5 cut(s) 126, 459, 932, 957, 1301
FalI AAGNNNNNCTT 2 cut(s) 14, 46
FaqI GGGAC 6 cut(s) 94, 111, 155, 181, 214, 437
FatI CATG 5 cut(s) 122, 455, 928, 953, 1297
Fnu4HI GCNGC 3 cut(s) 44, 869, 1332
FokI GGATG 4 cut(s) 323, 542, 617, 1254
Fsp4HI GCNGC 3 cut(s) 44, 869, 1332
FspBI CTAG 2 cut(s) 1061, 1272
GlaI GCGC 2 cut(s) 791, 1435
GluI GCNGC 3 cut(s) 44, 869, 1332
GsuI CTGGAG 2 cut(s) 468, 1241
HaeII RGCGCY 1 cut(s) 1437
HaeIII GGCC 2 cut(s) 1028, 1338
HapII CCGG 1 cut(s) 213
HhaI GCGC 2 cut(s) 792, 1436
Hin1I GRCGYC 1 cut(s) 1434
Hin1II CATG 5 cut(s) 126, 459, 932, 957, 1301
Hin6I GCGC 2 cut(s) 790, 1434
HinP1I GCGC 2 cut(s) 790, 1434
HincII GTYRAC 1 cut(s) 408
HindII GTYRAC 1 cut(s) 408
HindIII AAGCTT 2 cut(s) 859, 1471
HpaII CCGG 1 cut(s) 213
HphI GGTGA 3 cut(s) 74, 299, 1412
Hpy166II GTNNAC 3 cut(s) 52, 408, 548
Hpy188III TCNNGA 6 cut(s) 380, 838, 911, 1184, 1356, 1514
Hpy8I GTNNAC 3 cut(s) 52, 408, 548
Hpy99I CGWCG 1 cut(s) 75
HpyAV CCTTC 3 cut(s) 520, 803, 1004
HpyCH4III ACNGT 4 cut(s) 85, 693, 890, 1444
HpyCH4IV ACGT 1 cut(s) 70
HpyCH4V TGCA 7 cut(s) 4, 262, 416, 755, 767, 928, 1237
HpyF10VI GCNNNNNNNGC 4 cut(s) 117, 934, 1142, 1540
HpyF3I CTNAG 6 cut(s) 239, 275, 389, 854, 1080, 1341
HpySE526I ACGT 1 cut(s) 70
Hsp92I GRCGYC 1 cut(s) 1434
Hsp92II CATG 5 cut(s) 126, 459, 932, 957, 1301
HspAI GCGC 2 cut(s) 790, 1434
KasI GGCGCC 1 cut(s) 1433
Kzo9I GATC 4 cut(s) 64, 559, 1021, 1096
LguI GCTCTTC 1 cut(s) 273
LmnI GCTCC 5 cut(s) 490, 865, 1282, 1328, 1388
Lsp1109I GCAGC 3 cut(s) 55, 880, 1343
LweI GCATC 5 cut(s) 425, 639, 764, 915, 1400
MaeI CTAG 2 cut(s) 1061, 1272
MaeII ACGT 1 cut(s) 70
MaeIII GTNAC 2 cut(s) 287, 1410
MalI GATC 4 cut(s) 66, 561, 1023, 1098
MboI GATC 4 cut(s) 64, 559, 1021, 1096
MfeI CAATTG 2 cut(s) 551, 811
MflI RGATCY 2 cut(s) 559, 1021
MhlI GDGCHC 1 cut(s) 122
Mly113I GGCGCC 1 cut(s) 1434
MlyI GAGTC 6 cut(s) 26, 57, 459, 909, 944, 1205
MmeI TCCRAC 2 cut(s) 109, 1306
Mph1103I ATGCAT 1 cut(s) 930
MroXI GAANNNNTTC 1 cut(s) 375
MseI TTAA 7 cut(s) 485, 590, 623, 647, 1287, 1565, 1618
MslI CAYNNNNRTG 1 cut(s) 641
MspCI CTTAAG 1 cut(s) 1286
MspI CCGG 1 cut(s) 213
MspR9I CCNGG 6 cut(s) 194, 214, 447, 674, 1101, 1431
MunI CAATTG 2 cut(s) 551, 811
MvaI CCWGG 5 cut(s) 194, 447, 674, 1101, 1431
MwoI GCNNNNNNNGC 4 cut(s) 117, 934, 1142, 1540
NarI GGCGCC 1 cut(s) 1434
NciI CCSGG 1 cut(s) 214
NdeII GATC 4 cut(s) 64, 559, 1021, 1096
NlaIII CATG 5 cut(s) 126, 459, 932, 957, 1301
NlaIV GGNNCC 5 cut(s) 99, 169, 230, 671, 1435
NmuCI GTSAC 2 cut(s) 287, 1410
NsiI ATGCAT 1 cut(s) 930
PciSI GCTCTTC 1 cut(s) 273
PcsI WCGNNNNNNNCGW 1 cut(s) 1213
PdmI GAANNNNTTC 1 cut(s) 375
PfeI GAWTC 9 cut(s) 8, 36, 235, 895, 1037, 1084, 1113, 1204, 1589
PflMI CCANNNNNTGG 1 cut(s) 1325
PfoI TCCNGGA 2 cut(s) 445, 1099
PkrI GCNGC 3 cut(s) 45, 870, 1333
PleI GAGTC 6 cut(s) 25, 56, 458, 908, 944, 1204
PluTI GGCGCC 1 cut(s) 1437
PpsI GAGTC 6 cut(s) 25, 56, 458, 908, 944, 1204
PpuMI RGGWCCY 1 cut(s) 98
Psp5II RGGWCCY 1 cut(s) 98
Psp6I CCWGG 5 cut(s) 192, 445, 672, 1099, 1429
PspGI CCWGG 5 cut(s) 192, 445, 672, 1099, 1429
PspN4I GGNNCC 5 cut(s) 99, 169, 230, 671, 1435
PspPI GGNCC 7 cut(s) 98, 168, 201, 228, 669, 1337, 1570
PspPPI RGGWCCY 1 cut(s) 98
PstNI CAGNNNCTG 1 cut(s) 1094
PsuI RGATCY 2 cut(s) 559, 1021
RsaI GTAC 1 cut(s) 469
RsaNI GTAC 1 cut(s) 468
RseI CAYNNNNRTG 1 cut(s) 641
SapI GCTCTTC 1 cut(s) 273
SaqAI TTAA 7 cut(s) 485, 590, 623, 647, 1287, 1565, 1618
SatI GCNGC 3 cut(s) 44, 869, 1332
Sau3AI GATC 4 cut(s) 64, 559, 1021, 1096
Sau96I GGNCC 7 cut(s) 98, 168, 201, 228, 669, 1337, 1570
ScaI AGTACT 1 cut(s) 469
SchI GAGTC 6 cut(s) 26, 57, 459, 909, 944, 1205
ScrFI CCNGG 6 cut(s) 194, 214, 447, 674, 1101, 1431
SduI GDGCHC 1 cut(s) 122
SfaNI GCATC 5 cut(s) 425, 639, 764, 915, 1400
SfoI GGCGCC 1 cut(s) 1435
SinI GGWCC 6 cut(s) 98, 168, 201, 228, 669, 1570
SmiMI CAYNNNNRTG 1 cut(s) 641
SmlI CTYRAG 1 cut(s) 1286
SmoI CTYRAG 1 cut(s) 1286
SpeI ACTAGT 1 cut(s) 1060
SsiI CCGC 2 cut(s) 634, 1280
SspDI GGCGCC 1 cut(s) 1433
SspI AATATT 1 cut(s) 655
SspMI CTAG 2 cut(s) 1061, 1272
StyD4I CCNGG 6 cut(s) 192, 212, 445, 672, 1099, 1429
StyI CCWWGG 3 cut(s) 106, 1271, 1573
TaaI ACNGT 4 cut(s) 85, 693, 890, 1444
TaiI ACGT 1 cut(s) 73
TaqI TCGA 4 cut(s) 73, 394, 898, 1017
TaqII GACCGA 1 cut(s) 216
TatI WGTACW 1 cut(s) 467
TfiI GAWTC 9 cut(s) 8, 36, 235, 895, 1037, 1084, 1113, 1204, 1589
Tru1I TTAA 7 cut(s) 485, 590, 623, 647, 1287, 1565, 1618
Tru9I TTAA 7 cut(s) 485, 590, 623, 647, 1287, 1565, 1618
TscAI CASTG 4 cut(s) 90, 1095, 1265, 1419
TseFI GTSAC 2 cut(s) 287, 1410
TseI GCWGC 3 cut(s) 43, 868, 1331
Tsp45I GTSAC 2 cut(s) 287, 1410
TspDTI ATGAA 9 cut(s) 327, 846, 863, 945, 1256, 1286, 1326, 1566, 1602
TspGWI ACGGA 2 cut(s) 933, 1583
TspRI CASTG 4 cut(s) 90, 1095, 1265, 1419
Van91I CCANNNNNTGG 1 cut(s) 1325
Vha464I CTTAAG 1 cut(s) 1286
VpaK11BI GGWCC 6 cut(s) 98, 168, 201, 228, 669, 1570
XagI CCTNNNNNAGG 2 cut(s) 105, 1104
XapI RAATTY 4 cut(s) 375, 799, 982, 1458
XmaJI CCTAGG 1 cut(s) 1271
XmnI GAANNNNTTC 1 cut(s) 375
XspI CTAG 2 cut(s) 1061, 1272
ZrmI AGTACT 1 cut(s) 469
Zsp2I ATGCAT 1 cut(s) 930
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.