MADS
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD15G1395800.v1.1 MD15G1396300.v1.1 MD15G1407500.v1.1 |
| prunus_persica | Prupe.1G554100_v2.0.a1 |
| pyrus_communis | pycom08g19010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 261, 531 |
| AcsI | RAATTY | 1 cut(s) | 208 |
| AcuI | CTGAAG | 1 cut(s) | 290 |
| AfaI | GTAC | 1 cut(s) | 201 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 117 |
| AgsI | TTSAA | 2 cut(s) | 64, 356 |
| AjnI | CCWGG | 2 cut(s) | 284, 360 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 284, 316 |
| AluBI | AGCT | 2 cut(s) | 94, 343 |
| AluI | AGCT | 2 cut(s) | 94, 343 |
| Alw26I | GTCTC | 1 cut(s) | 398 |
| AlwI | GGATC | 2 cut(s) | 261, 531 |
| AoxI | GGCC | 1 cut(s) | 173 |
| ApoI | RAATTY | 1 cut(s) | 208 |
| AseI | ATTAAT | 1 cut(s) | 504 |
| AsuHPI | GGTGA | 1 cut(s) | 49 |
| BanII | GRGCYC | 1 cut(s) | 483 |
| BccI | CCATC | 3 cut(s) | 157, 244, 511 |
| BciT130I | CCWGG | 2 cut(s) | 286, 362 |
| BcoDI | GTCTC | 1 cut(s) | 398 |
| BfaI | CTAG | 2 cut(s) | 387, 413 |
| BlpI | GCTNAGC | 1 cut(s) | 339 |
| Bme1390I | CCNGG | 2 cut(s) | 286, 362 |
| BmrFI | CCNGG | 2 cut(s) | 286, 362 |
| BmsI | GCATC | 3 cut(s) | 157, 325, 484 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 339 |
| BpuEI | CTTGAG | 1 cut(s) | 497 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 117 |
| Bse1I | ACTGG | 1 cut(s) | 207 |
| BseBI | CCWGG | 2 cut(s) | 286, 362 |
| BseGI | GGATG | 1 cut(s) | 172 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 117 |
| BseMII | CTCAG | 2 cut(s) | 90, 330 |
| BseNI | ACTGG | 1 cut(s) | 207 |
| BshFI | GGCC | 1 cut(s) | 175 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 117 |
| BsmAI | GTCTC | 1 cut(s) | 398 |
| BsmBI | CGTCTC | 1 cut(s) | 398 |
| BsnI | GGCC | 1 cut(s) | 175 |
| Bsp1286I | GDGCHC | 1 cut(s) | 483 |
| Bsp143I | GATC | 3 cut(s) | 253, 418, 523 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 339 |
| BspANI | GGCC | 1 cut(s) | 175 |
| BspCNI | CTCAG | 2 cut(s) | 91, 331 |
| BspHI | TCATGA | 1 cut(s) | 37 |
| BspPI | GGATC | 2 cut(s) | 261, 531 |
| BsrI | ACTGG | 1 cut(s) | 207 |
| BssMI | GATC | 3 cut(s) | 253, 418, 523 |
| Bst2UI | CCWGG | 2 cut(s) | 286, 362 |
| Bst6I | CTCTTC | 1 cut(s) | 62 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 335 |
| BstDEI | CTNAG | 3 cut(s) | 99, 159, 339 |
| BstF5I | GGATG | 1 cut(s) | 172 |
| BstKTI | GATC | 3 cut(s) | 256, 421, 526 |
| BstMAI | GTCTC | 1 cut(s) | 398 |
| BstMBI | GATC | 3 cut(s) | 253, 418, 523 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 335 |
| BstNI | CCWGG | 2 cut(s) | 286, 362 |
| BstSCI | CCNGG | 2 cut(s) | 284, 360 |
| BsuRI | GGCC | 1 cut(s) | 175 |
| BtsCI | GGATG | 1 cut(s) | 172 |
| CciI | TCATGA | 1 cut(s) | 37 |
| Csp6I | GTAC | 1 cut(s) | 200 |
| CviAII | CATG | 3 cut(s) | 23, 38, 466 |
| CviJI | RGCY | 9 cut(s) | 94, 175, 263, 289, 311, 343, 428, 481, 531 |
| CviKI_1 | RGCY | 9 cut(s) | 94, 175, 263, 289, 311, 343, 428, 481, 531 |
| CviQI | GTAC | 1 cut(s) | 200 |
| DdeI | CTNAG | 3 cut(s) | 99, 159, 339 |
| DpnI | GATC | 3 cut(s) | 255, 420, 525 |
| DpnII | GATC | 3 cut(s) | 253, 418, 523 |
| DraI | TTTAAA | 1 cut(s) | 319 |
| Eam1104I | CTCTTC | 1 cut(s) | 62 |
| EarI | CTCTTC | 1 cut(s) | 62 |
| Eco24I | GRGCYC | 1 cut(s) | 483 |
| Eco57I | CTGAAG | 1 cut(s) | 290 |
| EcoRII | CCWGG | 2 cut(s) | 284, 360 |
| EcoT38I | GRGCYC | 1 cut(s) | 483 |
| Esp3I | CGTCTC | 1 cut(s) | 398 |
| FaeI | CATG | 3 cut(s) | 26, 41, 469 |
| FaiI | YATR | 8 cut(s) | 24, 39, 115, 144, 198, 248, 281, 467 |
| FatI | CATG | 3 cut(s) | 22, 37, 465 |
| FokI | GGATG | 1 cut(s) | 179 |
| FriOI | GRGCYC | 1 cut(s) | 483 |
| FspBI | CTAG | 2 cut(s) | 387, 413 |
| HaeIII | GGCC | 1 cut(s) | 175 |
| Hin1II | CATG | 3 cut(s) | 26, 41, 469 |
| HinfI | GANTC | 3 cut(s) | 54, 155, 383 |
| HphI | GGTGA | 1 cut(s) | 49 |
| Hpy166II | GTNNAC | 1 cut(s) | 371 |
| Hpy188I | TCNGA | 5 cut(s) | 89, 154, 270, 398, 511 |
| Hpy188III | TCNNGA | 3 cut(s) | 38, 64, 476 |
| Hpy8I | GTNNAC | 1 cut(s) | 371 |
| HpyAV | CCTTC | 3 cut(s) | 70, 186, 359 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 335 |
| HpyF3I | CTNAG | 3 cut(s) | 99, 159, 339 |
| Hsp92II | CATG | 3 cut(s) | 26, 41, 469 |
| Kzo9I | GATC | 3 cut(s) | 253, 418, 523 |
| LpnPI | CCDG | 8 cut(s) | 34, 142, 188, 271, 298, 325, 347, 374 |
| LweI | GCATC | 3 cut(s) | 157, 325, 484 |
| MaeI | CTAG | 2 cut(s) | 387, 413 |
| MaeIII | GTNAC | 1 cut(s) | 55 |
| MalI | GATC | 3 cut(s) | 255, 420, 525 |
| MboI | GATC | 3 cut(s) | 253, 418, 523 |
| MboII | GAAGA | 3 cut(s) | 79, 283, 428 |
| MfeI | CAATTG | 2 cut(s) | 299, 422 |
| MhlI | GDGCHC | 1 cut(s) | 483 |
| MlyI | GAGTC | 1 cut(s) | 63 |
| MnlI | CCTC | 1 cut(s) | 230 |
| MseI | TTAA | 4 cut(s) | 18, 213, 318, 504 |
| MslI | CAYNNNNRTG | 1 cut(s) | 378 |
| MspR9I | CCNGG | 2 cut(s) | 286, 362 |
| MunI | CAATTG | 2 cut(s) | 299, 422 |
| MvaI | CCWGG | 2 cut(s) | 286, 362 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 335 |
| NdeII | GATC | 3 cut(s) | 253, 418, 523 |
| NlaIII | CATG | 3 cut(s) | 26, 41, 469 |
| NmuCI | GTSAC | 1 cut(s) | 55 |
| PagI | TCATGA | 1 cut(s) | 37 |
| PfeI | GAWTC | 2 cut(s) | 155, 383 |
| PleI | GAGTC | 1 cut(s) | 62 |
| PpsI | GAGTC | 1 cut(s) | 62 |
| PshBI | ATTAAT | 1 cut(s) | 504 |
| Psp6I | CCWGG | 2 cut(s) | 284, 360 |
| PspGI | CCWGG | 2 cut(s) | 284, 360 |
| RsaI | GTAC | 1 cut(s) | 201 |
| RsaNI | GTAC | 1 cut(s) | 200 |
| RseI | CAYNNNNRTG | 1 cut(s) | 378 |
| SaqAI | TTAA | 4 cut(s) | 18, 213, 318, 504 |
| Sau3AI | GATC | 3 cut(s) | 253, 418, 523 |
| SchI | GAGTC | 1 cut(s) | 63 |
| ScrFI | CCNGG | 2 cut(s) | 286, 362 |
| SduI | GDGCHC | 1 cut(s) | 483 |
| SetI | ASST | 6 cut(s) | 62, 96, 113, 345, 363, 370 |
| SfaNI | GCATC | 3 cut(s) | 157, 325, 484 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 378 |
| SmlI | CTYRAG | 1 cut(s) | 476 |
| SmoI | CTYRAG | 1 cut(s) | 476 |
| SspMI | CTAG | 2 cut(s) | 387, 413 |
| StyD4I | CCNGG | 2 cut(s) | 284, 360 |
| TatI | WGTACW | 1 cut(s) | 199 |
| TfiI | GAWTC | 2 cut(s) | 155, 383 |
| Tru1I | TTAA | 4 cut(s) | 18, 213, 318, 504 |
| Tru9I | TTAA | 4 cut(s) | 18, 213, 318, 504 |
| TseFI | GTSAC | 1 cut(s) | 55 |
| Tsp45I | GTSAC | 1 cut(s) | 55 |
| TspDTI | ATGAA | 5 cut(s) | 39, 54, 433, 454, 501 |
| VspI | ATTAAT | 1 cut(s) | 504 |
| XapI | RAATTY | 1 cut(s) | 208 |
| XspI | CTAG | 2 cut(s) | 387, 413 |