Ribosomal RNA small subunit methyltransferase NEP1-like
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1295100.v1.1 |
| prunus_persica | Prupe.1G567900_v2.0.a1 Prupe.1G569000_v2.0.a1 |
| pyrus_communis | pycom02g24810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 162 |
| AciI | CCGC | 2 cut(s) | 42, 110 |
| AcoI | YGGCCR | 1 cut(s) | 55 |
| AfaI | GTAC | 1 cut(s) | 145 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 162 |
| AjnI | CCWGG | 1 cut(s) | 155 |
| AoxI | GGCC | 1 cut(s) | 55 |
| AsuHPI | GGTGA | 1 cut(s) | 46 |
| BalI | TGGCCA | 1 cut(s) | 57 |
| BccI | CCATC | 1 cut(s) | 59 |
| BciT130I | CCWGG | 1 cut(s) | 157 |
| BclI | TGATCA | 1 cut(s) | 103 |
| Bme1390I | CCNGG | 1 cut(s) | 157 |
| BmrFI | CCNGG | 1 cut(s) | 157 |
| Bsa29I | ATCGAT | 1 cut(s) | 11 |
| BsaJI | CCNNGG | 1 cut(s) | 155 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 162 |
| Bse1I | ACTGG | 1 cut(s) | 58 |
| Bse3DI | GCAATG | 1 cut(s) | 149 |
| BseBI | CCWGG | 1 cut(s) | 157 |
| BseCI | ATCGAT | 1 cut(s) | 11 |
| BseDI | CCNNGG | 1 cut(s) | 155 |
| BseGI | GGATG | 1 cut(s) | 106 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 162 |
| BseMI | GCAATG | 1 cut(s) | 149 |
| BseMII | CTCAG | 1 cut(s) | 104 |
| BseNI | ACTGG | 1 cut(s) | 58 |
| BshFI | GGCC | 1 cut(s) | 57 |
| BshVI | ATCGAT | 1 cut(s) | 11 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 162 |
| BsnI | GGCC | 1 cut(s) | 57 |
| Bsp143I | GATC | 1 cut(s) | 103 |
| BspACI | CCGC | 2 cut(s) | 42, 110 |
| BspANI | GGCC | 1 cut(s) | 57 |
| BspCNI | CTCAG | 1 cut(s) | 105 |
| BspDI | ATCGAT | 1 cut(s) | 11 |
| BsrDI | GCAATG | 1 cut(s) | 149 |
| BsrI | ACTGG | 1 cut(s) | 58 |
| BssECI | CCNNGG | 1 cut(s) | 155 |
| BssMI | GATC | 1 cut(s) | 103 |
| Bst2UI | CCWGG | 1 cut(s) | 157 |
| BstC8I | GCNNGC | 1 cut(s) | 46 |
| BstDEI | CTNAG | 1 cut(s) | 113 |
| BstF5I | GGATG | 1 cut(s) | 106 |
| BstKTI | GATC | 1 cut(s) | 106 |
| BstMBI | GATC | 1 cut(s) | 103 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 54 |
| BstNI | CCWGG | 1 cut(s) | 157 |
| BstSCI | CCNGG | 1 cut(s) | 155 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 65 |
| Bsu15I | ATCGAT | 1 cut(s) | 11 |
| BsuRI | GGCC | 1 cut(s) | 57 |
| BsuTUI | ATCGAT | 1 cut(s) | 11 |
| BtsCI | GGATG | 1 cut(s) | 106 |
| Cac8I | GCNNGC | 1 cut(s) | 46 |
| ClaI | ATCGAT | 1 cut(s) | 11 |
| Csp6I | GTAC | 1 cut(s) | 144 |
| CviAII | CATG | 1 cut(s) | 83 |
| CviJI | RGCY | 1 cut(s) | 57 |
| CviKI_1 | RGCY | 1 cut(s) | 57 |
| CviQI | GTAC | 1 cut(s) | 144 |
| DdeI | CTNAG | 1 cut(s) | 113 |
| DpnI | GATC | 1 cut(s) | 105 |
| DpnII | GATC | 1 cut(s) | 103 |
| EaeI | YGGCCR | 1 cut(s) | 55 |
| EcoRII | CCWGG | 1 cut(s) | 155 |
| FaeI | CATG | 1 cut(s) | 86 |
| FaiI | YATR | 2 cut(s) | 25, 84 |
| FatI | CATG | 1 cut(s) | 82 |
| FbaI | TGATCA | 1 cut(s) | 103 |
| FokI | GGATG | 1 cut(s) | 93 |
| HaeIII | GGCC | 1 cut(s) | 57 |
| Hin1II | CATG | 1 cut(s) | 86 |
| HphI | GGTGA | 1 cut(s) | 46 |
| Hpy166II | GTNNAC | 1 cut(s) | 37 |
| Hpy188I | TCNGA | 2 cut(s) | 64, 103 |
| Hpy8I | GTNNAC | 1 cut(s) | 37 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 54 |
| HpyF3I | CTNAG | 1 cut(s) | 113 |
| Hsp92II | CATG | 1 cut(s) | 86 |
| Ksp22I | TGATCA | 1 cut(s) | 103 |
| Kzo9I | GATC | 1 cut(s) | 103 |
| LpnPI | CCDG | 4 cut(s) | 71, 142, 143, 169 |
| MalI | GATC | 1 cut(s) | 105 |
| MboI | GATC | 1 cut(s) | 103 |
| MlsI | TGGCCA | 1 cut(s) | 57 |
| MluNI | TGGCCA | 1 cut(s) | 57 |
| Mox20I | TGGCCA | 1 cut(s) | 57 |
| MscI | TGGCCA | 1 cut(s) | 57 |
| Msp20I | TGGCCA | 1 cut(s) | 57 |
| MspA1I | CMGCKG | 1 cut(s) | 112 |
| MspR9I | CCNGG | 1 cut(s) | 157 |
| MvaI | CCWGG | 1 cut(s) | 157 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 54 |
| NdeII | GATC | 1 cut(s) | 103 |
| NlaIII | CATG | 1 cut(s) | 86 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 162 |
| Psp6I | CCWGG | 1 cut(s) | 155 |
| PspGI | CCWGG | 1 cut(s) | 155 |
| RsaI | GTAC | 1 cut(s) | 145 |
| RsaNI | GTAC | 1 cut(s) | 144 |
| Sau3AI | GATC | 1 cut(s) | 103 |
| ScrFI | CCNGG | 1 cut(s) | 157 |
| SgeI | CNNG | 7 cut(s) | 57, 65, 70, 95, 142, 168, 169 |
| SsiI | CCGC | 2 cut(s) | 42, 110 |
| SspI | AATATT | 1 cut(s) | 169 |
| StyD4I | CCNGG | 1 cut(s) | 155 |
| TaqI | TCGA | 1 cut(s) | 11 |
| TatI | WGTACW | 1 cut(s) | 143 |
| TspDTI | ATGAA | 1 cut(s) | 12 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 162 |