Prupe.2G004500_v2.0.a1

Zeaxanthin epoxidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0017386
Physical Location & Seq
Reverse (-)
458463 .. 461628
3166 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G004500.3

Sequence Viewer

Length: 1422 bp
ATGTCAAATTGCAGGTACTTAATTAATTCATGCATTCACCAGACCTATGACATTCTTGATTTTAGAACAACACAGTCCAGCAAGACCAGAAGCTATTATGTAAGATGTCAAAATAGTTTTGATCAGACCTTAGATGGAGAGAATGGTGGCAATAGGAAGCTTAAAATCCTCATTGCAGGTGGGGGTATTGGGAGGCTAGTTTTGGCACTAGCAGCGAAACATGAAGGATTTGAAGTACAGGTCTTTGAGAAGGACTTGAGTGCAGTGAGAGGGGAGGGACAACACCGTGGACCGATTCAGCTTGTGAGTAGCGCTTTGGAGGTCCTGGAAGCCATTGACGAGAATGTTGCAAAACAAATCAAGGAAGCAGGTTGTGTTACTGGCAATAGGACCACTGGCTATGCCGACGGTCTCTCAGGTGAATGGATTATCAAGTTTGATCTTTCATCTCCAGCTGTAAGTAGGGGGCTTCCTCTCACTCTAGTAATATGCAGGATGGCACTGCAAGATATCTTACTCAATGCTGTTGGGTTGGACATTGTGAGAAACAAATCTAAAGTGGTGGACTTCCTTGAAGACCCTAGCAAGGTCACTGTGATCCTTGAAGATGGCCAGCAATATGATGGTGAGGTTTTAGTAGGAGCTGATGGAATATGGTCAAAGGTGCGCGCAAAATTATTTGGGGAACGGGAAGCAAAATATTCAACTTACACATCCTACAGTGGAGTGACAAACTTTGTGCCACCATATATTGATAGTGTTGCGTACCGGATCTTCTTGGGATTGAACCAGTGCTTTGTTGCAACGGATGTTGGGAATGGAAAGATACAATGGTTTGCCAACCATAAAGAGCAGCCCATGAGCAATGATCCTCCTGAAGGTAAAAAGAAGAGGCTCCTCGAGAAATTTGGTAACTGGTGTCCTGAAGTGGTTACACTAATTCAAAAAACACCAGAGTCCATGATTTTACGGAGAGATATCTATGATAGAGACATGATTTACACCTGGGGAGCCGGGCGTGTTACTCTGCTGGGTGATGCTGCTCATCCAATGCAGCCGAATCTTGGCCAAGGGGGTTGCATGGCAATTGAGGATTGTTACCAACTTATACATGAGCTTGTTCAAGCTTCCGAAAGTGACTCAAATGTTCAAATATCGGAAGAAATTGTCTTGGCACTAAGAAGATATGCAAACAAAAGATTGTGGCGTGTTGGCTTAGTGTTTGCAGCCAGCCGATTTGCTTCAAAAATGCTTGCCAGTTACAAACCTTACATAGAGTTTAAAATTGGTCCTCTGGCTCATCTATTAACTCAGCAGATAACGCACCCTGCAATTCCTGTATTTCGTGCATTTCTGCAAATTTGTTTGCCAAAATTTATGGCTTGGATCACAGCAGGGCATGGGTTATGCCTCAAAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
FAD_binding_3

Protein Analysis

474

Amino Acids

52.74

Weight (kDa)

8.37

Isoelectric Point (pI)

35.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 167
Acc36I ACCTGC 3 cut(s) 3, 167, 359
AccII CGCG 1 cut(s) 669
AclWI GGATC 4 cut(s) 592, 779, 863, 1394
AcoI YGGCCR 2 cut(s) 610, 1066
AcsI RAATTY 3 cut(s) 905, 1359, 1373
AcuI CTGAAG 2 cut(s) 897, 945
AfaI GTAC 3 cut(s) 17, 237, 767
AfeI AGCGCT 1 cut(s) 313
AfiI CCNNNNNNNGG 3 cut(s) 586, 878, 1064
AgsI TTSAA 9 cut(s) 233, 575, 605, 705, 787, 944, 1124, 1151, 1245
AjnI CCWGG 2 cut(s) 324, 1004
AluBI AGCT 7 cut(s) 93, 160, 301, 455, 644, 1117, 1127
AluI AGCT 7 cut(s) 93, 160, 301, 455, 644, 1117, 1127
Alw26I GTCTC 2 cut(s) 416, 984
AlwI GGATC 4 cut(s) 592, 779, 863, 1394
Ama87I CYCGRG 1 cut(s) 899
Aor51HI AGCGCT 1 cut(s) 313
AoxI GGCC 2 cut(s) 610, 1066
ApeKI GCWGC 5 cut(s) 212, 853, 1040, 1054, 1226
ApoI RAATTY 3 cut(s) 905, 1359, 1373
AseI ATTAAT 1 cut(s) 24
AspLEI GCGC 3 cut(s) 314, 669, 671
AspS9I GGNCC 4 cut(s) 290, 322, 390, 1289
AsuC2I CCSGG 1 cut(s) 1015
AsuHPI GGTGA 4 cut(s) 29, 431, 638, 1046
AvaI CYCGRG 1 cut(s) 899
AvaII GGWCC 4 cut(s) 290, 322, 390, 1289
BaeI ACNNNNGTAYC 2 cut(s) 818, 851
BalI TGGCCA 2 cut(s) 612, 1068
BarI GAAGNNNNNNTAC 2 cut(s) 758, 790
BbsI GAAGAC 1 cut(s) 582
BbvI GCAGC 5 cut(s) 224, 865, 1027, 1066, 1238
BccI CCATC 5 cut(s) 128, 490, 602, 617, 641
BcgI CGANNNNNNTGC 2 cut(s) 329, 363
BciT130I CCWGG 2 cut(s) 326, 1006
BclI TGATCA 1 cut(s) 121
BcnI CCSGG 1 cut(s) 1015
BcoDI GTCTC 2 cut(s) 416, 984
BfaI CTAG 4 cut(s) 197, 209, 482, 582
BfmI CTRYAG 1 cut(s) 718
BfoI RGCGCY 1 cut(s) 315
BfuAI ACCTGC 3 cut(s) 3, 167, 359
BisI GCNGC 5 cut(s) 213, 854, 1041, 1055, 1227
BlsI GCNGC 5 cut(s) 214, 855, 1042, 1056, 1228
Bme1390I CCNGG 3 cut(s) 326, 1006, 1015
Bme18I GGWCC 4 cut(s) 290, 322, 390, 1289
BmeT110I CYCGRG 1 cut(s) 899
BmgT120I GGNCC 4 cut(s) 290, 322, 390, 1289
BmiI GGNNCC 2 cut(s) 896, 1012
BmrFI CCNGG 3 cut(s) 326, 1006, 1015
BmsI GCATC 1 cut(s) 1027
BpiI GAAGAC 1 cut(s) 582
BpmI CTGGAG 1 cut(s) 435
BpuEI CTTGAG 1 cut(s) 277
BpuMI CCSGG 1 cut(s) 1015
BsaI GGTCTC 1 cut(s) 416
BsaJI CCNNGG 3 cut(s) 286, 1005, 1069
BsaWI WCCGGW 1 cut(s) 768
Bsc4I CCNNNNNNNGG 3 cut(s) 586, 878, 1064
Bse1I ACTGG 5 cut(s) 385, 400, 790, 920, 1257
Bse3DI GCAATG 2 cut(s) 171, 871
BseBI CCWGG 2 cut(s) 326, 1006
BseDI CCNNGG 3 cut(s) 286, 1005, 1069
BseGI GGATG 4 cut(s) 501, 713, 814, 1045
BseLI CCNNNNNNNGG 3 cut(s) 586, 878, 1064
BseMI GCAATG 2 cut(s) 171, 871
BseMII CTCAG 2 cut(s) 429, 1325
BseNI ACTGG 5 cut(s) 385, 400, 790, 920, 1257
BsePI GCGCGC 1 cut(s) 667
BseRI GAGGAG 1 cut(s) 887
BseXI GCAGC 5 cut(s) 224, 865, 1027, 1066, 1238
BseYI CCCAGC 1 cut(s) 1030
BsgI GTGCAG 1 cut(s) 282
Bsh1236I CGCG 1 cut(s) 669
BshFI GGCC 2 cut(s) 612, 1068
BsiHKCI CYCGRG 1 cut(s) 899
BsiSI CCGG 2 cut(s) 769, 1014
BslFI GGGAC 1 cut(s) 291
BslI CCNNNNNNNGG 3 cut(s) 586, 878, 1064
BsmAI GTCTC 2 cut(s) 416, 984
BsmFI GGGAC 1 cut(s) 291
BsmI GAATGC 1 cut(s) 33
BsnI GGCC 2 cut(s) 612, 1068
Bso31I GGTCTC 1 cut(s) 416
BsoBI CYCGRG 1 cut(s) 899
Bsp143I GATC 6 cut(s) 121, 439, 597, 771, 868, 1386
BspANI GGCC 2 cut(s) 612, 1068
BspCNI CTCAG 2 cut(s) 428, 1324
BspFNI CGCG 1 cut(s) 669
BspLI GGNNCC 2 cut(s) 896, 1012
BspMI ACCTGC 3 cut(s) 3, 167, 359
BspPI GGATC 4 cut(s) 592, 779, 863, 1394
BspTNI GGTCTC 1 cut(s) 416
BsrDI GCAATG 2 cut(s) 171, 871
BsrI ACTGG 5 cut(s) 385, 400, 790, 920, 1257
BssECI CCNNGG 3 cut(s) 286, 1005, 1069
BssHII GCGCGC 1 cut(s) 667
BssMI GATC 6 cut(s) 121, 439, 597, 771, 868, 1386
BssT1I CCWWGG 1 cut(s) 1069
Bst2UI CCWGG 2 cut(s) 326, 1006
Bst4CI ACNGT 5 cut(s) 75, 287, 410, 595, 722
Bst6I CTCTTC 1 cut(s) 884
BstC8I GCNNGC 4 cut(s) 614, 669, 1231, 1254
BstDEI CTNAG 5 cut(s) 130, 415, 1178, 1216, 1311
BstDSI CCRYGG 1 cut(s) 286
BstENI CCTNNNNNAGG 1 cut(s) 876
BstF5I GGATG 4 cut(s) 501, 713, 814, 1045
BstFNI CGCG 1 cut(s) 669
BstH2I RGCGCY 1 cut(s) 315
BstHHI GCGC 3 cut(s) 314, 669, 671
BstKTI GATC 6 cut(s) 124, 442, 600, 774, 871, 1389
BstMAI GTCTC 2 cut(s) 416, 984
BstMBI GATC 6 cut(s) 121, 439, 597, 771, 868, 1386
BstMWI GCNNNNNNNGC 2 cut(s) 212, 1321
BstNI CCWGG 2 cut(s) 326, 1006
BstSCI CCNGG 3 cut(s) 324, 1004, 1013
BstSFI CTRYAG 1 cut(s) 718
BstUI CGCG 1 cut(s) 669
BstV1I GCAGC 5 cut(s) 224, 865, 1027, 1066, 1238
BstV2I GAAGAC 1 cut(s) 582
BstX2I RGATCY 1 cut(s) 771
BstYI RGATCY 1 cut(s) 771
BsuRI GGCC 2 cut(s) 612, 1068
BtgI CCRYGG 1 cut(s) 286
BtsCI GGATG 4 cut(s) 501, 713, 814, 1045
BtsI GCAGTG 2 cut(s) 270, 500
BtsIMutI CAGTG 6 cut(s) 270, 393, 500, 591, 727, 797
BveI ACCTGC 3 cut(s) 3, 167, 359
Cac8I GCNNGC 4 cut(s) 614, 669, 1231, 1254
CfoI GCGC 3 cut(s) 314, 669, 671
Cfr13I GGNCC 4 cut(s) 290, 322, 390, 1289
Csp6I GTAC 3 cut(s) 16, 236, 766
CviAII CATG 8 cut(s) 30, 221, 859, 961, 994, 1081, 1112, 1400
CviQI GTAC 3 cut(s) 16, 236, 766
DdeI CTNAG 5 cut(s) 130, 415, 1178, 1216, 1311
DpnI GATC 6 cut(s) 123, 441, 599, 773, 870, 1388
DpnII GATC 6 cut(s) 121, 439, 597, 771, 868, 1386
DraI TTTAAA 1 cut(s) 1282
EaeI YGGCCR 2 cut(s) 610, 1066
Eam1104I CTCTTC 1 cut(s) 884
EarI CTCTTC 1 cut(s) 884
Eco130I CCWWGG 1 cut(s) 1069
Eco31I GGTCTC 1 cut(s) 416
Eco32I GATATC 2 cut(s) 511, 979
Eco47I GGWCC 4 cut(s) 290, 322, 390, 1289
Eco47III AGCGCT 1 cut(s) 313
Eco57I CTGAAG 2 cut(s) 897, 945
Eco88I CYCGRG 1 cut(s) 899
EcoNI CCTNNNNNAGG 1 cut(s) 876
EcoO109I RGGNCCY 1 cut(s) 322
EcoRII CCWGG 2 cut(s) 324, 1004
EcoRV GATATC 2 cut(s) 511, 979
EcoT14I CCWWGG 1 cut(s) 1069
EcoT22I ATGCAT 1 cut(s) 35
ErhI CCWWGG 1 cut(s) 1069
FaeI CATG 8 cut(s) 33, 224, 862, 964, 997, 1084, 1115, 1403
FaqI GGGAC 1 cut(s) 291
FatI CATG 8 cut(s) 29, 220, 858, 960, 993, 1080, 1111, 1399
FbaI TGATCA 1 cut(s) 121
Fnu4HI GCNGC 5 cut(s) 213, 854, 1041, 1055, 1227
FokI GGATG 4 cut(s) 508, 700, 821, 1032
Fsp4HI GCNGC 5 cut(s) 213, 854, 1041, 1055, 1227
FspBI CTAG 4 cut(s) 197, 209, 482, 582
GlaI GCGC 3 cut(s) 313, 668, 670
GluI GCNGC 5 cut(s) 213, 854, 1041, 1055, 1227
GsaI CCCAGC 1 cut(s) 1034
GsuI CTGGAG 1 cut(s) 435
HaeII RGCGCY 1 cut(s) 315
HaeIII GGCC 2 cut(s) 612, 1068
HapII CCGG 2 cut(s) 769, 1014
HhaI GCGC 3 cut(s) 314, 669, 671
Hin1II CATG 8 cut(s) 33, 224, 862, 964, 997, 1084, 1115, 1403
Hin6I GCGC 3 cut(s) 312, 667, 669
HinP1I GCGC 3 cut(s) 312, 667, 669
HindIII AAGCTT 2 cut(s) 158, 1125
HinfI GANTC 4 cut(s) 295, 956, 1060, 1139
HpaII CCGG 2 cut(s) 769, 1014
HphI GGTGA 4 cut(s) 29, 431, 638, 1046
Hpy166II GTNNAC 2 cut(s) 290, 565
Hpy188I TCNGA 3 cut(s) 126, 1132, 1159
Hpy188III TCNNGA 4 cut(s) 56, 875, 901, 923
Hpy8I GTNNAC 2 cut(s) 290, 565
Hpy99I CGWCG 1 cut(s) 410
HpyAV CCTTC 3 cut(s) 218, 244, 872
HpyCH4III ACNGT 5 cut(s) 75, 287, 410, 595, 722
HpyF10VI GCNNNNNNNGC 2 cut(s) 212, 1321
HpyF3I CTNAG 5 cut(s) 130, 415, 1178, 1216, 1311
Hsp92II CATG 8 cut(s) 33, 224, 862, 964, 997, 1084, 1115, 1403
HspAI GCGC 3 cut(s) 312, 667, 669
Ksp22I TGATCA 1 cut(s) 121
Kzo9I GATC 6 cut(s) 121, 439, 597, 771, 868, 1386
LmnI GCTCC 3 cut(s) 641, 900, 1010
Lsp1109I GCAGC 5 cut(s) 224, 865, 1027, 1066, 1238
LweI GCATC 1 cut(s) 1027
MaeI CTAG 4 cut(s) 197, 209, 482, 582
MaeIII GTNAC 9 cut(s) 376, 589, 727, 911, 931, 1021, 1097, 1136, 1259
MalI GATC 6 cut(s) 123, 441, 599, 773, 870, 1388
MboI GATC 6 cut(s) 121, 439, 597, 771, 868, 1386
MboII GAAGA 6 cut(s) 587, 617, 766, 901, 1172, 1194
MfeI CAATTG 1 cut(s) 1086
MflI RGATCY 1 cut(s) 771
MlsI TGGCCA 2 cut(s) 612, 1068
MluNI TGGCCA 2 cut(s) 612, 1068
MlyI GAGTC 2 cut(s) 965, 1133
MmeI TCCRAC 1 cut(s) 513
Mox20I TGGCCA 2 cut(s) 612, 1068
Mph1103I ATGCAT 1 cut(s) 35
MscI TGGCCA 2 cut(s) 612, 1068
MseI TTAA 5 cut(s) 20, 24, 162, 1281, 1307
Msp20I TGGCCA 2 cut(s) 612, 1068
MspA1I CMGCKG 1 cut(s) 455
MspI CCGG 2 cut(s) 769, 1014
MspR9I CCNGG 3 cut(s) 326, 1006, 1015
MunI CAATTG 1 cut(s) 1086
Mva1269I GAATGC 1 cut(s) 33
MvaI CCWGG 2 cut(s) 326, 1006
MvnI CGCG 1 cut(s) 669
MwoI GCNNNNNNNGC 2 cut(s) 212, 1321
NciI CCSGG 1 cut(s) 1015
NdeII GATC 6 cut(s) 121, 439, 597, 771, 868, 1386
NlaIII CATG 8 cut(s) 33, 224, 862, 964, 997, 1084, 1115, 1403
NlaIV GGNNCC 2 cut(s) 896, 1012
NmuCI GTSAC 3 cut(s) 589, 727, 1136
NsiI ATGCAT 1 cut(s) 35
PacI TTAATTAA 1 cut(s) 24
PaeR7I CTCGAG 1 cut(s) 899
PaqCI CACCTGC 1 cut(s) 167
PauI GCGCGC 1 cut(s) 667
PctI GAATGC 1 cut(s) 33
PfeI GAWTC 2 cut(s) 295, 1060
PfoI TCCNGGA 1 cut(s) 324
PkrI GCNGC 5 cut(s) 214, 855, 1042, 1056, 1228
PleI GAGTC 2 cut(s) 964, 1133
PpsI GAGTC 2 cut(s) 964, 1133
PpuMI RGGWCCY 1 cut(s) 322
PshBI ATTAAT 1 cut(s) 24
Psp5II RGGWCCY 1 cut(s) 322
Psp6I CCWGG 2 cut(s) 324, 1004
PspFI CCCAGC 1 cut(s) 1030
PspGI CCWGG 2 cut(s) 324, 1004
PspN4I GGNNCC 2 cut(s) 896, 1012
PspPI GGNCC 4 cut(s) 290, 322, 390, 1289
PspPPI RGGWCCY 1 cut(s) 322
PsuI RGATCY 1 cut(s) 771
PteI GCGCGC 1 cut(s) 667
PvuII CAGCTG 1 cut(s) 455
RsaI GTAC 3 cut(s) 17, 237, 767
RsaNI GTAC 3 cut(s) 16, 236, 766
SaqAI TTAA 5 cut(s) 20, 24, 162, 1281, 1307
SatI GCNGC 5 cut(s) 213, 854, 1041, 1055, 1227
Sau3AI GATC 6 cut(s) 121, 439, 597, 771, 868, 1386
Sau96I GGNCC 4 cut(s) 290, 322, 390, 1289
SchI GAGTC 2 cut(s) 965, 1133
ScrFI CCNGG 3 cut(s) 326, 1006, 1015
SfaNI GCATC 1 cut(s) 1027
SfcI CTRYAG 1 cut(s) 718
Sfr274I CTCGAG 1 cut(s) 899
SinI GGWCC 4 cut(s) 290, 322, 390, 1289
SlaI CTCGAG 1 cut(s) 899
SmlI CTYRAG 2 cut(s) 256, 899
SmoI CTYRAG 2 cut(s) 256, 899
SspI AATATT 1 cut(s) 701
SspMI CTAG 4 cut(s) 197, 209, 482, 582
StyD4I CCNGG 3 cut(s) 324, 1004, 1013
StyI CCWWGG 1 cut(s) 1069
TaaI ACNGT 5 cut(s) 75, 287, 410, 595, 722
TaqI TCGA 1 cut(s) 900
TaqII GACCGA 1 cut(s) 307
TatI WGTACW 1 cut(s) 235
TfiI GAWTC 2 cut(s) 295, 1060
Tru1I TTAA 5 cut(s) 20, 24, 162, 1281, 1307
Tru9I TTAA 5 cut(s) 20, 24, 162, 1281, 1307
TscAI CASTG 6 cut(s) 270, 400, 507, 598, 727, 797
TseFI GTSAC 3 cut(s) 589, 727, 1136
TseI GCWGC 5 cut(s) 212, 853, 1040, 1054, 1226
Tsp45I GTSAC 3 cut(s) 589, 727, 1136
TspDTI ATGAA 3 cut(s) 18, 237, 435
TspGWI ACGGA 2 cut(s) 821, 985
TspRI CASTG 6 cut(s) 270, 400, 507, 598, 727, 797
VpaK11BI GGWCC 4 cut(s) 290, 322, 390, 1289
VspI ATTAAT 1 cut(s) 24
XagI CCTNNNNNAGG 1 cut(s) 876
XapI RAATTY 3 cut(s) 905, 1359, 1373
XcmI CCANNNNNNNNNTGG 1 cut(s) 620
XhoI CTCGAG 1 cut(s) 899
XspI CTAG 4 cut(s) 197, 209, 482, 582
Zsp2I ATGCAT 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.