Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0015942

Physical Location & Seq

Genomic Coordinates Forward (+)

20503735 .. 20505749

Gene Structure 2015 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G149500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 888 bp

ATGCCATCCCGACCTCCACCATCTTCCCCACCCATCCACCACGTCCACCACCGCCACCTCCTCCTCCCTCTCCTGACCGTAACCATAACCCTAGCCTTTATCTCCCTACTCTCCTTCCTCATCTTCCTCTACCGCAAGCTCTCCTACAACCGCACGACGCCGTTCGACCACCACCATAGCAGCGCCACTGCCACACCCACCACCACTCCCACCACCCCCACCACCGCCACCAACACCAAGAAGAATAACAACAACCGGTTCTCTTACTCTGCTATCCGGCGAGCCACCGAGAGGAAGAAGAGGAAGATCATTAACTCCAGCCTTACACGGAGTATTGATTGGTGGTTGGATGGATTGGGTGGTGAAATTAGAAGTGGGAGGAGGAATAGCCAAGATTGGGGTAGTACTTGTGGTGGTGATGTTCCAAAGAGTGGTGGTATTAGTAGCACACCAAGCATGAGAGGCACAGTTTGTTATGTTGCCCCTGAATATGGTGGCGGTGGGCAGCTCTCTGAGAAATGTGATGTCTATAGCTTTGGGGTATTGGTTTTGGTCTTGATTTCGGGTCGGAGGCCTCTTCAAGTCACGGCCTCCCCCATGTCAGAATTCGAGAGGGCCAATCTAATTTCATGGGCCAGGCAGCTTGCTCGAAATGGGAAGCTTTTGGATCTTGTCGACCAGTCTATACATTCTTTAGATAAGGAAGAGGCATTGCTTTGTATCACAATTGCATTGCTATGTCTGCAGAGAACACCGGGCAAGCGGCCAACGATGAAGGAGATTGTGGGGATCCTTTTGGGTGAAGCAGAGCCACCCCATTTGCCCTTCGAGTTTTCACCTTCCCCGCCTTCCAATTTTCCGTTCAAGTCCCGGAAAAAGGCCCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

296

Amino Acids

32.69

Weight (kDa)

10.05

Isoelectric Point (pI)

56.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015942)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45590
fragaria_vesca	FvH4_7g12490
malus_domestica	MD02G1198700.v1.1
prunus_persica	Prupe.2G149500_v2.0.a1
pyrus_communis	pycom02g16260
rosa_chinensis	RchiOBHm_Chr1g0351331
rosa_laevigata	RLG00000028413
rosa_multiflora	Rmu_sc0004933.1_g000010
rosa_roxburghii	Rroxscaffold_4G00303870
rosa_rugosa	Rorug01G0217700
rosa_samantha	Rh1AG232200 Rh1BG202500 Rh1CG217000 Rh1DG229700
rosa_wichuraiana	Rw1G020220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	431
AccI	GTMKAC	1 cut(s)	675
AciI	CCGC	7 cut(s)	52, 133, 151, 225, 498, 763, 845
AclWI	GGATC	3 cut(s)	675, 784, 797
AcoI	YGGCCR	1 cut(s)	764
AcsI	RAATTY	1 cut(s)	605
AcyI	GRCGYC	1 cut(s)	158
AfaI	GTAC	1 cut(s)	406
AfiI	CCNNNNNNNGG	5 cut(s)	291, 397, 431, 491, 877
AgeI	ACCGGT	1 cut(s)	255
AgsI	TTSAA	2 cut(s)	581, 865
AjiI	CACGTC	1 cut(s)	43
AjnI	CCWGG	1 cut(s)	635
AjuI	GAANNNNNNNTTGG	2 cut(s)	845, 877
AluBI	AGCT	5 cut(s)	139, 508, 534, 643, 661
AluI	AGCT	5 cut(s)	139, 508, 534, 643, 661
AlwI	GGATC	3 cut(s)	675, 784, 797
AoxI	GGCC	6 cut(s)	572, 588, 615, 633, 764, 879
ApeKI	GCWGC	3 cut(s)	180, 505, 640
ApoI	RAATTY	1 cut(s)	605
AsiGI	ACCGGT	1 cut(s)	255
AspLEI	GCGC	1 cut(s)	185
AspS9I	GGNCC	3 cut(s)	615, 633, 880
AsuC2I	CCSGG	3 cut(s)	756, 871, 883
AsuHPI	GGTGA	4 cut(s)	374, 428, 812, 828
BamHI	GGATCC	1 cut(s)	789
BbvI	GCAGC	3 cut(s)	192, 517, 652
BccI	CCATC	4 cut(s)	13, 28, 41, 344
BceAI	ACGGC	2 cut(s)	145, 603
BcgI	CGANNNNNNTGC	2 cut(s)	629, 663
BciT130I	CCWGG	1 cut(s)	637
BcnI	CCSGG	3 cut(s)	756, 871, 883
BfaI	CTAG	1 cut(s)	92
BfmI	CTRYAG	2 cut(s)	529, 743
BfoI	RGCGCY	1 cut(s)	186
BisI	GCNGC	4 cut(s)	181, 506, 641, 764
BlsI	GCNGC	4 cut(s)	182, 507, 642, 765
BmcAI	AGTACT	1 cut(s)	406
Bme1390I	CCNGG	4 cut(s)	637, 756, 871, 883
BmgBI	CACGTC	1 cut(s)	43
BmgT120I	GGNCC	3 cut(s)	615, 633, 880
BmiI	GGNNCC	1 cut(s)	791
BmrFI	CCNGG	4 cut(s)	637, 756, 871, 883
BpmI	CTGGAG	1 cut(s)	301
BpuMI	CCSGG	3 cut(s)	756, 871, 883
BsaHI	GRCGYC	1 cut(s)	158
BsaWI	WCCGGW	1 cut(s)	255
BsaXI	ACNNNNNCTCC	2 cut(s)	190, 220
Bsc4I	CCNNNNNNNGG	5 cut(s)	291, 397, 431, 491, 877
Bse118I	RCCGGY	1 cut(s)	255
Bse1I	ACTGG	1 cut(s)	679
Bse3DI	GCAATG	2 cut(s)	710, 731
BseBI	CCWGG	1 cut(s)	637
BseGI	GGATG	3 cut(s)	5, 33, 355
BseLI	CCNNNNNNNGG	5 cut(s)	291, 397, 431, 491, 877
BseMI	GCAATG	2 cut(s)	710, 731
BseMII	CTCAG	1 cut(s)	504
BseNI	ACTGG	1 cut(s)	679
BseRI	GAGGAG	3 cut(s)	50, 53, 394
BseXI	GCAGC	3 cut(s)	192, 517, 652
BshFI	GGCC	6 cut(s)	574, 590, 617, 635, 766, 881
BshTI	ACCGGT	1 cut(s)	255
BsiSI	CCGG	5 cut(s)	256, 277, 755, 871, 883
BslFI	GGGAC	1 cut(s)	853
BslI	CCNNNNNNNGG	5 cut(s)	291, 397, 431, 491, 877
BsmFI	GGGAC	1 cut(s)	853
BsnI	GGCC	6 cut(s)	574, 590, 617, 635, 766, 881
Bsp143I	GATC	3 cut(s)	306, 667, 789
BspACI	CCGC	7 cut(s)	52, 133, 151, 225, 498, 763, 845
BspANI	GGCC	6 cut(s)	574, 590, 617, 635, 766, 881
BspCNI	CTCAG	1 cut(s)	505
BspLI	GGNNCC	1 cut(s)	791
BspMAI	CTGCAG	1 cut(s)	747
BspPI	GGATC	3 cut(s)	675, 784, 797
BsrDI	GCAATG	2 cut(s)	710, 731
BsrFI	RCCGGY	1 cut(s)	255
BsrI	ACTGG	1 cut(s)	679
BssAI	RCCGGY	1 cut(s)	255
BssMI	GATC	3 cut(s)	306, 667, 789
BssNI	GRCGYC	1 cut(s)	158
Bst2UI	CCWGG	1 cut(s)	637
Bst4CI	ACNGT	2 cut(s)	79, 469
Bst6I	CTCTTC	3 cut(s)	293, 582, 699
BstACI	GRCGYC	1 cut(s)	158
BstC8I	GCNNGC	4 cut(s)	137, 282, 645, 761
BstDEI	CTNAG	1 cut(s)	513
BstF5I	GGATG	3 cut(s)	5, 33, 355
BstH2I	RGCGCY	1 cut(s)	186
BstHHI	GCGC	1 cut(s)	185
BstKTI	GATC	3 cut(s)	309, 670, 792
BstMBI	GATC	3 cut(s)	306, 667, 789
BstMWI	GCNNNNNNNGC	3 cut(s)	453, 462, 742
BstNI	CCWGG	1 cut(s)	637
BstSCI	CCNGG	4 cut(s)	635, 754, 869, 881
BstSFI	CTRYAG	2 cut(s)	529, 743
BstV1I	GCAGC	3 cut(s)	192, 517, 652
BstX2I	RGATCY	2 cut(s)	667, 789
BstYI	RGATCY	2 cut(s)	667, 789
BsuRI	GGCC	6 cut(s)	574, 590, 617, 635, 766, 881
BtrI	CACGTC	1 cut(s)	43
BtsCI	GGATG	3 cut(s)	5, 33, 355
BtsI	GCAGTG	1 cut(s)	186
BtsIMutI	CAGTG	1 cut(s)	186
Cac8I	GCNNGC	4 cut(s)	137, 282, 645, 761
CfoI	GCGC	1 cut(s)	185
Cfr10I	RCCGGY	1 cut(s)	255
Cfr13I	GGNCC	3 cut(s)	615, 633, 880
CseI	GACGC	1 cut(s)	166
Csp6I	GTAC	1 cut(s)	405
CspAI	ACCGGT	1 cut(s)	255
CspCI	CAANNNNNGTGG	2 cut(s)	801, 836
CviAII	CATG	3 cut(s)	457, 598, 630
CviQI	GTAC	1 cut(s)	405
DdeI	CTNAG	1 cut(s)	513
DpnI	GATC	3 cut(s)	308, 669, 791
DpnII	GATC	3 cut(s)	306, 667, 789
EaeI	YGGCCR	1 cut(s)	764
Eam1104I	CTCTTC	3 cut(s)	293, 582, 699
EarI	CTCTTC	3 cut(s)	293, 582, 699
Eco147I	AGGCCT	1 cut(s)	574
EcoRI	GAATTC	1 cut(s)	605
EcoRII	CCWGG	1 cut(s)	635
FaeI	CATG	3 cut(s)	460, 601, 633
FaqI	GGGAC	1 cut(s)	853
FatI	CATG	3 cut(s)	456, 597, 629
FauI	CCCGC	1 cut(s)	852
FblI	GTMKAC	1 cut(s)	675
Fnu4HI	GCNGC	4 cut(s)	181, 506, 641, 764
FokI	GGATG	2 cut(s)	20, 362
Fsp4HI	GCNGC	4 cut(s)	181, 506, 641, 764
FspBI	CTAG	1 cut(s)	92
GlaI	GCGC	1 cut(s)	184
GluI	GCNGC	4 cut(s)	181, 506, 641, 764
GsuI	CTGGAG	1 cut(s)	301
HaeII	RGCGCY	1 cut(s)	186
HaeIII	GGCC	6 cut(s)	574, 590, 617, 635, 766, 881
HapII	CCGG	5 cut(s)	256, 277, 755, 871, 883
HgaI	GACGC	1 cut(s)	166
HhaI	GCGC	1 cut(s)	185
Hin1I	GRCGYC	1 cut(s)	158
Hin1II	CATG	3 cut(s)	460, 601, 633
Hin6I	GCGC	1 cut(s)	183
HinP1I	GCGC	1 cut(s)	183
HincII	GTYRAC	1 cut(s)	676
HindII	GTYRAC	1 cut(s)	676
HindIII	AAGCTT	1 cut(s)	659
HpaII	CCGG	5 cut(s)	256, 277, 755, 871, 883
HphI	GGTGA	4 cut(s)	374, 428, 812, 828
Hpy166II	GTNNAC	2 cut(s)	46, 676
Hpy188I	TCNGA	3 cut(s)	514, 570, 604
Hpy188III	TCNNGA	4 cut(s)	9, 73, 556, 610
Hpy8I	GTNNAC	2 cut(s)	46, 676
Hpy99I	CGWCG	1 cut(s)	160
HpyAV	CCTTC	5 cut(s)	124, 769, 835, 849, 858
HpyCH4III	ACNGT	2 cut(s)	79, 469
HpyCH4IV	ACGT	1 cut(s)	42
HpyCH4V	TGCA	2 cut(s)	731, 745
HpyF10VI	GCNNNNNNNGC	3 cut(s)	453, 462, 742
HpyF3I	CTNAG	1 cut(s)	513
HpySE526I	ACGT	1 cut(s)	42
Hsp92I	GRCGYC	1 cut(s)	158
Hsp92II	CATG	3 cut(s)	460, 601, 633
HspAI	GCGC	1 cut(s)	183
Kzo9I	GATC	3 cut(s)	306, 667, 789
Lsp1109I	GCAGC	3 cut(s)	192, 517, 652
MaeI	CTAG	1 cut(s)	92
MaeII	ACGT	1 cut(s)	42
MaeIII	GTNAC	2 cut(s)	79, 583
MalI	GATC	3 cut(s)	308, 669, 791
MboI	GATC	3 cut(s)	306, 667, 789
MboII	GAAGA	8 cut(s)	15, 115, 253, 307, 310, 316, 569, 716
MfeI	CAATTG	1 cut(s)	726
MflI	RGATCY	2 cut(s)	667, 789
MluCI	AATT	5 cut(s)	366, 605, 624, 726, 853
MmeI	TCCRAC	2 cut(s)	327, 548
MseI	TTAA	1 cut(s)	312
MslI	CAYNNNNRTG	1 cut(s)	736
MspI	CCGG	5 cut(s)	256, 277, 755, 871, 883
MspR9I	CCNGG	4 cut(s)	637, 756, 871, 883
MunI	CAATTG	1 cut(s)	726
MvaI	CCWGG	1 cut(s)	637
MwoI	GCNNNNNNNGC	3 cut(s)	453, 462, 742
NciI	CCSGG	3 cut(s)	756, 871, 883
NdeII	GATC	3 cut(s)	306, 667, 789
NlaIII	CATG	3 cut(s)	460, 601, 633
NlaIV	GGNNCC	1 cut(s)	791
NmuCI	GTSAC	1 cut(s)	583
PceI	AGGCCT	1 cut(s)	574
PflMI	CCANNNNNTGG	1 cut(s)	431
PfoI	TCCNGGA	1 cut(s)	869
PinAI	ACCGGT	1 cut(s)	255
PkrI	GCNGC	4 cut(s)	182, 507, 642, 765
Psp6I	CCWGG	1 cut(s)	635
PspGI	CCWGG	1 cut(s)	635
PspN4I	GGNNCC	1 cut(s)	791
PspPI	GGNCC	3 cut(s)	615, 633, 880
PstI	CTGCAG	1 cut(s)	747
PsuI	RGATCY	2 cut(s)	667, 789
RsaI	GTAC	1 cut(s)	406
RsaNI	GTAC	1 cut(s)	405
RseI	CAYNNNNRTG	1 cut(s)	736
SalI	GTCGAC	1 cut(s)	674
SaqAI	TTAA	1 cut(s)	312
SatI	GCNGC	4 cut(s)	181, 506, 641, 764
Sau3AI	GATC	3 cut(s)	306, 667, 789
Sau96I	GGNCC	3 cut(s)	615, 633, 880
ScaI	AGTACT	1 cut(s)	406
ScrFI	CCNGG	4 cut(s)	637, 756, 871, 883
SetI	ASST	9 cut(s)	16, 45, 60, 141, 510, 536, 645, 663, 841
SfcI	CTRYAG	2 cut(s)	529, 743
SmiMI	CAYNNNNRTG	1 cut(s)	736
Sse9I	AATT	5 cut(s)	366, 605, 624, 726, 853
SseBI	AGGCCT	1 cut(s)	574
SsiI	CCGC	7 cut(s)	52, 133, 151, 225, 498, 763, 845
SspMI	CTAG	1 cut(s)	92
StuI	AGGCCT	1 cut(s)	574
StyD4I	CCNGG	4 cut(s)	635, 754, 869, 881
TaaI	ACNGT	2 cut(s)	79, 469
TaiI	ACGT	1 cut(s)	45
TaqI	TCGA	5 cut(s)	165, 609, 649, 675, 828
TasI	AATT	5 cut(s)	366, 605, 624, 726, 853
TatI	WGTACW	1 cut(s)	404
TauI	GCSGC	1 cut(s)	766
Tru1I	TTAA	1 cut(s)	312
Tru9I	TTAA	1 cut(s)	312
TscAI	CASTG	1 cut(s)	193
TseFI	GTSAC	1 cut(s)	583
TseI	GCWGC	3 cut(s)	180, 505, 640
Tsp45I	GTSAC	1 cut(s)	583
TspDTI	ATGAA	2 cut(s)	618, 788
TspGWI	ACGGA	2 cut(s)	343, 849
TspRI	CASTG	1 cut(s)	193
Van91I	CCANNNNNTGG	1 cut(s)	431
XapI	RAATTY	1 cut(s)	605
XmiI	GTMKAC	1 cut(s)	675
XspI	CTAG	1 cut(s)	92
ZrmI	AGTACT	1 cut(s)	406

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.