Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0015942

Physical Location & Seq

Genomic Coordinates Forward (+)

44171264 .. 44173539

Gene Structure 2276 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG229700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGCCATCCCTTCCCGAACCTCCGCCACCGCTAACCCATCACCACCACCGCAACCGCAACCGCCACCTCCTCATTCCACTCCTCACCGTAGCCCTAACCCTCACCCTCCTCTCCATCCTCGTCTTCATTGTCTTCCTCTACCGCAAGCTCTCCAGAAGCCGCACAACCCCGTTCGATCACCAAAATAGCAACCCCACCGCCGCCGCCGCCGTCGACGCCGCCGTTGATAGTAACAATGACAACAGTAACCAGCAGCAGCGGAGGTACTCGTACTCTCTTCTCCGGCGCGCCACCGGTTCGTTCTCGGCTTCGAACCGGCTCGGCCACGGCGGGTTCGGCTCGGTGTACAAGGCCATGCTCCCTTCCGGCCAGTCCCTCGCCGTGAAAGTGATGGACTCCGAGGGGTCTCTACAAGGCGAGCGAGAGTTCCACAATGAACTCTCTCTGGCCTTGAACCTCAGCAATCCACACATACTATCTCTGCTCGGCTTCTCCACCGACCGCCGTGGCCGGAAACTGTGCCTGGTCTACGAGCTCATGCCGAATCGGAGCCTCCAGGAGGCTCTGCTGGACCGGAAGTGTCCGGAGCTCATGGTGTGGAAGAAGAGATTCAGTGTGGTGCTGGATGTTGCGAGAGGACTGGAGTATCTGCACAACGACTGTGACCCGCCGGTGATTCACGGCGACGTGAAGCCCAGCAATGTGCTGCTGGACTCGGATTTCAATGCCAAGATTGGGGATTTCGGGCTGGCGAGGCTGAAAACGGAGGGGGAGTTGGATCAGGGAGATCAAGTGGTGGTGGTGGAGGAAGGAGATGAGGGAGAGAGTGAGAAAAAAGAGGTTCTTGAAGTGGCTGTGGCCGTTGGGGATGATAATGGTTCGATCTTGGAAGAGGAGAGCATGAGTTTGAGTGTGGTGACCGGTGGATTGGAAGATGGCCGGTCGCCGGATTGCTGTGTGGTTAGGATTTCGGATTCGGAGGCGTCTCCGGTGGCCGCAGCGGCAGCGGCAGGTTTGTCGCCGGAAGCGGGTTTTGATAAGTTTAGTATTGACAGTGAGAAGGAATTGGTTAGTGGGAAGAGGATGAAGGGAAGTTCGGGGAGGGATTGGTGGTGGAAGCAGGACAATGGTGGAGCAGGAGGGTCTGAGTCCGGGAGGGTTAAGGACTATGTAATGGAGTGGATTGGGAGTGAGATTAAGAAAGAGAGGCCGAAAAGCGAATGGGTTGCTTCTCCGAGCACCAACAGTGAGCCCAAGAAGCGGAGGAAGAAATTGGAATGGTGGGTGTCTTTGGATGAGGACAAGGTTAAGAAGAAGGAGAAGGCTAGGAAGCCGAGGGAGTGGTGGAAGGAGGAGTTCTGCGAGGAGCTTAGTAAGAAAAAGAAGAAGAAGAAGAGGGGTCTCGATTCGGGTTGTGGTGGAGAATTGTGGTGGCAGAAGGATGAGGAGGATTTGGGGTCGGAGAGGAAGAAGAGGAAGAGTAAGAGCAAGAGTAGTAGAGGTAGCATTGATTGGTGGTTAGATGGATTTGGAAGTGAGCTCAGAAGTGGGCGGAGGAATAGTCAGGACTGGGCTAGTTGCGGCGGGGGTGATATACCGAAGAGTGGTGGCATTAGTAGCACACCGAGCATGAGAGGCACGGTTTGTTATGTTGCTCCTGAATATGGTGGTGGAGGGCAGCTCTCTGAGAAATGTGATGTGTATAGCTTCGGGGTTCTGGTTTTGGTCTTGATTTCGGGGCGGAGGCCGCTACAAGTAACAGCCTCCCCCATGTCGGAGTTTGAGAGGGCCAATCTGATTTCATGGGCTCGGCAACTTGCTCGAAATGGGAAGCTTTTGGACCTTGTAGACCAGTCTATACATTCTTTGGACAAGGAAGAGGCATTGCTCTGTATCACAATTGCATTGCTATGCCTGCAAAGAACACCAGGCAAACGGCCAACCATGAAGGAAATTGTAGGGATGTTAACGGGTGAAGCCGAGCCGCCCCATTTGCCTTTCGAGTTCTCACCATCACCGCCTTCCAATTTTCCGTTCAAGTCCCGGAAAAAGGCCCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

686

Amino Acids

76.09

Weight (kDa)

8.52

Isoelectric Point (pI)

52.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	103 - 257	5.6e-27	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	104 - 256	7.3e-27	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	541 - 653	2.2e-08	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015942)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45590
fragaria_vesca	FvH4_7g12490
malus_domestica	MD02G1198700.v1.1
prunus_persica	Prupe.2G149500_v2.0.a1
pyrus_communis	pycom02g16260
rosa_chinensis	RchiOBHm_Chr1g0351331
rosa_laevigata	RLG00000028413
rosa_multiflora	Rmu_sc0004933.1_g000010
rosa_roxburghii	Rroxscaffold_4G00303870
rosa_rugosa	Rorug01G0217700
rosa_samantha	Rh1AG232200 Rh1BG202500 Rh1CG217000 Rh1DG229700
rosa_wichuraiana	Rw1G020220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1001
AccI	GTMKAC	3 cut(s)	213, 528, 1848
AccII	CGCG	1 cut(s)	288
AccIII	TCCGGA	1 cut(s)	583
AclWI	GGATC	1 cut(s)	786
AcoI	YGGCCR	7 cut(s)	322, 367, 508, 858, 937, 993, 1937
AcyI	GRCGYC	2 cut(s)	216, 983
AfaI	GTAC	3 cut(s)	266, 272, 347
AfiI	CCNNNNNNNGG	9 cut(s)	559, 735, 946, 1028, 1260, 1604, 1664, 1774, 2050
AgeI	ACCGGT	2 cut(s)	293, 920
AgsI	TTSAA	4 cut(s)	454, 724, 848, 2038
AjiI	CACGTC	1 cut(s)	688
AjnI	CCWGG	3 cut(s)	522, 555, 1927
AjuI	GAANNNNNNNTTGG	2 cut(s)	2018, 2050
AluBI	AGCT	8 cut(s)	148, 535, 589, 1369, 1540, 1681, 1707, 1834
AluI	AGCT	8 cut(s)	148, 535, 589, 1369, 1540, 1681, 1707, 1834
Alw21I	GWGCWC	4 cut(s)	537, 591, 1241, 1542
Alw26I	GTCTC	3 cut(s)	411, 990, 1406
AlwI	GGATC	1 cut(s)	786
Aor13HI	TCCGGA	1 cut(s)	583
ApeKI	GCWGC	6 cut(s)	253, 256, 706, 998, 1004, 1678
AscI	GGCGCGCC	1 cut(s)	286
AsiGI	ACCGGT	2 cut(s)	293, 920
Asp700I	GAANNNNTTC	1 cut(s)	608
AspLEI	GCGC	2 cut(s)	288, 290
AspS9I	GGNCC	4 cut(s)	571, 1788, 1840, 2053
AsuC2I	CCSGG	3 cut(s)	1153, 2044, 2056
AsuII	TTCGAA	1 cut(s)	311
AvaII	GGWCC	2 cut(s)	571, 1840
BaeI	ACNNNNGTAYC	2 cut(s)	629, 662
BanII	GRGCYC	5 cut(s)	537, 591, 1254, 1542, 1810
BbsI	GAAGAC	2 cut(s)	115, 124
Bbv12I	GWGCWC	4 cut(s)	537, 591, 1241, 1542
BbvCI	CCTCAGC	1 cut(s)	458
BbvI	GCAGC	6 cut(s)	265, 268, 693, 1010, 1016, 1690
BccI	CCATC	7 cut(s)	13, 45, 122, 385, 929, 1517, 2020
BceAI	ACGGC	8 cut(s)	194, 206, 343, 365, 489, 697, 845, 1952
BcgI	CGANNNNNNTGC	6 cut(s)	999, 1033, 1208, 1242, 1802, 1836
BciT130I	CCWGG	3 cut(s)	524, 557, 1929
BcnI	CCSGG	3 cut(s)	1153, 2044, 2056
BcoDI	GTCTC	3 cut(s)	411, 990, 1406
BfaI	CTAG	2 cut(s)	1326, 1575
BfuAI	ACCTGC	1 cut(s)	1001
BglI	GCCNNNNNGGC	1 cut(s)	1001
Bme1390I	CCNGG	6 cut(s)	524, 557, 1153, 1929, 2044, 2056
Bme18I	GGWCC	2 cut(s)	571, 1840
BmgBI	CACGTC	1 cut(s)	688
BmgT120I	GGNCC	4 cut(s)	571, 1788, 1840, 2053
BmiI	GGNNCC	1 cut(s)	551
BmrFI	CCNGG	6 cut(s)	524, 557, 1153, 1929, 2044, 2056
BmrI	ACTGGG	1 cut(s)	1579
BmuI	ACTGGG	1 cut(s)	1579
BpiI	GAAGAC	2 cut(s)	115, 124
BplI	GAGNNNNNCTC	2 cut(s)	1665, 1697
BpmI	CTGGAG	3 cut(s)	136, 539, 662
Bpu10I	CCTNAGC	1 cut(s)	458
Bpu14I	TTCGAA	1 cut(s)	311
BpuMI	CCSGG	3 cut(s)	1153, 2044, 2056
BsaHI	GRCGYC	2 cut(s)	216, 983
BsaI	GGTCTC	2 cut(s)	411, 1406
BsaJI	CCNNGG	4 cut(s)	325, 399, 505, 1334
BsaWI	WCCGGW	5 cut(s)	293, 573, 583, 920, 988
BsaXI	ACNNNNNCTCC	6 cut(s)	758, 777, 788, 807, 1546, 1576
Bsc4I	CCNNNNNNNGG	9 cut(s)	559, 735, 946, 1028, 1260, 1604, 1664, 1774, 2050
Bse118I	RCCGGY	5 cut(s)	293, 315, 670, 920, 939
Bse1I	ACTGG	4 cut(s)	370, 645, 1574, 1852
Bse3DI	GCAATG	3 cut(s)	706, 1883, 1904
BseAI	TCCGGA	1 cut(s)	583
BseBI	CCWGG	3 cut(s)	524, 557, 1929
BseDI	CCNNGG	4 cut(s)	325, 399, 505, 1334
BseGI	GGATG	8 cut(s)	5, 114, 631, 874, 1089, 1300, 1447, 1968
BseLI	CCNNNNNNNGG	9 cut(s)	559, 735, 946, 1028, 1260, 1604, 1664, 1774, 2050
BseMI	GCAATG	3 cut(s)	706, 1883, 1904
BseMII	CTCAG	4 cut(s)	472, 1137, 1555, 1677
BseNI	ACTGG	4 cut(s)	370, 645, 1574, 1852
BsePI	GCGCGC	1 cut(s)	286
BseRI	GAGGAG	7 cut(s)	59, 71, 98, 908, 1367, 1379, 1460
BseXI	GCAGC	6 cut(s)	265, 268, 693, 1010, 1016, 1690
BseYI	CCCAGC	1 cut(s)	695
BsgI	GTGCAG	1 cut(s)	635
Bsh1236I	CGCG	1 cut(s)	288
Bsh1285I	CGRYCG	2 cut(s)	502, 944
BshTI	ACCGGT	2 cut(s)	293, 920
BsiEI	CGRYCG	2 cut(s)	502, 944
BsiHKAI	GWGCWC	4 cut(s)	537, 591, 1241, 1542
BslFI	GGGAC	2 cut(s)	358, 2026
BslI	CCNNNNNNNGG	9 cut(s)	559, 735, 946, 1028, 1260, 1604, 1664, 1774, 2050
BsmAI	GTCTC	3 cut(s)	411, 990, 1406
BsmBI	CGTCTC	1 cut(s)	990
BsmFI	GGGAC	2 cut(s)	358, 2026
Bso31I	GGTCTC	2 cut(s)	411, 1406
Bsp119I	TTCGAA	1 cut(s)	311
Bsp1286I	GDGCHC	6 cut(s)	537, 591, 1241, 1254, 1542, 1810
Bsp13I	TCCGGA	1 cut(s)	583
Bsp1407I	TGTACA	1 cut(s)	345
Bsp143I	GATC	4 cut(s)	175, 778, 787, 882
BspCNI	CTCAG	4 cut(s)	471, 1138, 1554, 1678
BspEI	TCCGGA	1 cut(s)	583
BspFNI	CGCG	1 cut(s)	288
BspLI	GGNNCC	1 cut(s)	551
BspMI	ACCTGC	1 cut(s)	1001
BspPI	GGATC	1 cut(s)	786
BspT104I	TTCGAA	1 cut(s)	311
BspTNI	GGTCTC	2 cut(s)	411, 1406
BsrDI	GCAATG	3 cut(s)	706, 1883, 1904
BsrFI	RCCGGY	5 cut(s)	293, 315, 670, 920, 939
BsrGI	TGTACA	1 cut(s)	345
BsrI	ACTGG	4 cut(s)	370, 645, 1574, 1852
BssAI	RCCGGY	5 cut(s)	293, 315, 670, 920, 939
BssECI	CCNNGG	4 cut(s)	325, 399, 505, 1334
BssHII	GCGCGC	1 cut(s)	286
BssMI	GATC	4 cut(s)	175, 778, 787, 882
BssNI	GRCGYC	2 cut(s)	216, 983
Bst2UI	CCWGG	3 cut(s)	524, 557, 1929
Bst4CI	ACNGT	7 cut(s)	88, 245, 519, 662, 1055, 1247, 1642
Bst6I	CTCTTC	9 cut(s)	282, 599, 885, 1073, 1388, 1466, 1472, 1595, 1872
BstACI	GRCGYC	2 cut(s)	216, 983
BstAUI	TGTACA	1 cut(s)	345
BstBI	TTCGAA	1 cut(s)	311
BstC8I	GCNNGC	5 cut(s)	146, 288, 419, 750, 1916
BstDEI	CTNAG	5 cut(s)	458, 1146, 1370, 1541, 1686
BstDSI	CCRYGG	2 cut(s)	325, 505
BstEII	GGTNACC	1 cut(s)	916
BstENI	CCTNNNNNAGG	1 cut(s)	557
BstF5I	GGATG	8 cut(s)	5, 114, 631, 874, 1089, 1300, 1447, 1968
BstFNI	CGCG	1 cut(s)	288
BstHHI	GCGC	2 cut(s)	288, 290
BstKTI	GATC	4 cut(s)	178, 781, 790, 885
BstMAI	GTCTC	3 cut(s)	411, 990, 1406
BstMBI	GATC	4 cut(s)	175, 778, 787, 882
BstMCI	CGRYCG	2 cut(s)	502, 944
BstNI	CCWGG	3 cut(s)	524, 557, 1929
BstPI	GGTNACC	1 cut(s)	916
BstSCI	CCNGG	6 cut(s)	522, 555, 1151, 1927, 2042, 2054
BstUI	CGCG	1 cut(s)	288
BstV1I	GCAGC	6 cut(s)	265, 268, 693, 1010, 1016, 1690
BstV2I	GAAGAC	2 cut(s)	115, 124
BtgI	CCRYGG	2 cut(s)	325, 505
BtrI	CACGTC	1 cut(s)	688
BtsCI	GGATG	8 cut(s)	5, 114, 631, 874, 1089, 1300, 1447, 1968
BtsIMutI	CAGTG	3 cut(s)	619, 1060, 1252
BveI	ACCTGC	1 cut(s)	1001
Cac8I	GCNNGC	5 cut(s)	146, 288, 419, 750, 1916
CfoI	GCGC	2 cut(s)	288, 290
Cfr10I	RCCGGY	5 cut(s)	293, 315, 670, 920, 939
Cfr13I	GGNCC	4 cut(s)	571, 1788, 1840, 2053
CseI	GACGC	2 cut(s)	224, 972
Csp6I	GTAC	3 cut(s)	265, 271, 346
CspAI	ACCGGT	2 cut(s)	293, 920
CviAII	CATG	8 cut(s)	355, 538, 592, 901, 1630, 1771, 1803, 1945
CviQI	GTAC	3 cut(s)	265, 271, 346
DdeI	CTNAG	5 cut(s)	458, 1146, 1370, 1541, 1686
DpnI	GATC	4 cut(s)	177, 780, 789, 884
DpnII	GATC	4 cut(s)	175, 778, 787, 882
EaeI	YGGCCR	7 cut(s)	322, 367, 508, 858, 937, 993, 1937
Eam1104I	CTCTTC	9 cut(s)	282, 599, 885, 1073, 1388, 1466, 1472, 1595, 1872
EarI	CTCTTC	9 cut(s)	282, 599, 885, 1073, 1388, 1466, 1472, 1595, 1872
EciI	GGCGGA	3 cut(s)	12, 1567, 1756
Ecl136II	GAGCTC	3 cut(s)	535, 589, 1540
Eco24I	GRGCYC	5 cut(s)	537, 591, 1254, 1542, 1810
Eco31I	GGTCTC	2 cut(s)	411, 1406
Eco47I	GGWCC	2 cut(s)	571, 1840
Eco53kI	GAGCTC	3 cut(s)	535, 589, 1540
Eco91I	GGTNACC	1 cut(s)	916
EcoICRI	GAGCTC	3 cut(s)	535, 589, 1540
EcoNI	CCTNNNNNAGG	1 cut(s)	557
EcoO65I	GGTNACC	1 cut(s)	916
EcoRII	CCWGG	3 cut(s)	522, 555, 1927
EcoT38I	GRGCYC	5 cut(s)	537, 591, 1254, 1542, 1810
Esp3I	CGTCTC	1 cut(s)	990
FaeI	CATG	8 cut(s)	358, 541, 595, 904, 1633, 1774, 1806, 1948
FalI	AAGNNNNNCTT	2 cut(s)	828, 860
FaqI	GGGAC	2 cut(s)	358, 2026
FatI	CATG	8 cut(s)	354, 537, 591, 900, 1629, 1770, 1802, 1944
FauI	CCCGC	4 cut(s)	323, 675, 1021, 1577
FblI	GTMKAC	3 cut(s)	213, 528, 1848
FokI	GGATG	7 cut(s)	101, 638, 881, 1096, 1307, 1454, 1975
FriOI	GRGCYC	5 cut(s)	537, 591, 1254, 1542, 1810
FspBI	CTAG	2 cut(s)	1326, 1575
GlaI	GCGC	2 cut(s)	287, 289
GsaI	CCCAGC	1 cut(s)	699
GsuI	CTGGAG	3 cut(s)	136, 539, 662
HgaI	GACGC	2 cut(s)	224, 972
HhaI	GCGC	2 cut(s)	288, 290
Hin1I	GRCGYC	2 cut(s)	216, 983
Hin1II	CATG	8 cut(s)	358, 541, 595, 904, 1633, 1774, 1806, 1948
Hin6I	GCGC	2 cut(s)	286, 288
HinP1I	GCGC	2 cut(s)	286, 288
HincII	GTYRAC	2 cut(s)	214, 1968
HindII	GTYRAC	2 cut(s)	214, 1968
HindIII	AAGCTT	1 cut(s)	1832
HinfI	GANTC	8 cut(s)	395, 544, 609, 676, 713, 974, 1148, 1406
HpaI	GTTAAC	1 cut(s)	1968
Hpy166II	GTNNAC	5 cut(s)	214, 346, 529, 1849, 1968
Hpy188III	TCNNGA	8 cut(s)	14, 153, 584, 845, 1403, 1565, 1658, 1729
Hpy8I	GTNNAC	5 cut(s)	214, 346, 529, 1849, 1968
Hpy99I	CGWCG	3 cut(s)	215, 218, 689
HpyCH4III	ACNGT	7 cut(s)	88, 245, 519, 662, 1055, 1247, 1642
HpyCH4IV	ACGT	1 cut(s)	687
HpyCH4V	TGCA	3 cut(s)	652, 1904, 1918
HpyF3I	CTNAG	5 cut(s)	458, 1146, 1370, 1541, 1686
HpySE526I	ACGT	1 cut(s)	687
Hsp92I	GRCGYC	2 cut(s)	216, 983
Hsp92II	CATG	8 cut(s)	358, 541, 595, 904, 1633, 1774, 1806, 1948
HspAI	GCGC	2 cut(s)	286, 288
Kpn2I	TCCGGA	1 cut(s)	583
KspAI	GTTAAC	1 cut(s)	1968
Kzo9I	GATC	4 cut(s)	175, 778, 787, 882
LmnI	GCTCC	6 cut(s)	363, 549, 586, 1133, 1366, 1660
Lsp1109I	GCAGC	6 cut(s)	265, 268, 693, 1010, 1016, 1690
MaeI	CTAG	2 cut(s)	1326, 1575
MaeII	ACGT	1 cut(s)	687
MaeIII	GTNAC	5 cut(s)	230, 245, 662, 916, 1756
MalI	GATC	4 cut(s)	177, 780, 789, 884
MboI	GATC	4 cut(s)	175, 778, 787, 882
MfeI	CAATTG	1 cut(s)	1899
MhlI	GDGCHC	6 cut(s)	537, 591, 1241, 1254, 1542, 1810
MluCI	AATT	6 cut(s)	1064, 1271, 1424, 1899, 1953, 2026
MlyI	GAGTC	3 cut(s)	389, 707, 1157
MmeI	TCCRAC	3 cut(s)	756, 1440, 1755
MroI	TCCGGA	1 cut(s)	583
MroXI	GAANNNNTTC	1 cut(s)	608
MseI	TTAA	4 cut(s)	1161, 1197, 1308, 1967
MslI	CAYNNNNRTG	1 cut(s)	1909
MspA1I	CMGCKG	3 cut(s)	259, 1001, 1007
MspR9I	CCNGG	6 cut(s)	524, 557, 1153, 1929, 2044, 2056
MunI	CAATTG	1 cut(s)	1899
MvaI	CCWGG	3 cut(s)	524, 557, 1929
MvnI	CGCG	1 cut(s)	288
NciI	CCSGG	3 cut(s)	1153, 2044, 2056
NdeII	GATC	4 cut(s)	175, 778, 787, 882
NlaIII	CATG	8 cut(s)	358, 541, 595, 904, 1633, 1774, 1806, 1948
NlaIV	GGNNCC	1 cut(s)	551
NmeAIII	GCCGAG	6 cut(s)	284, 300, 465, 1359, 1789, 2005
NmuCI	GTSAC	2 cut(s)	662, 916
NspV	TTCGAA	1 cut(s)	311
PalAI	GGCGCGCC	1 cut(s)	286
PauI	GCGCGC	1 cut(s)	286
PcsI	WCGNNNNNNNCGW	1 cut(s)	219
PdmI	GAANNNNTTC	1 cut(s)	608
PfeI	GAWTC	5 cut(s)	544, 609, 676, 974, 1406
PfoI	TCCNGGA	3 cut(s)	555, 1151, 2042
PinAI	ACCGGT	2 cut(s)	293, 920
PleI	GAGTC	3 cut(s)	389, 707, 1156
PpsI	GAGTC	3 cut(s)	389, 707, 1156
Psp124BI	GAGCTC	3 cut(s)	537, 591, 1542
Psp6I	CCWGG	3 cut(s)	522, 555, 1927
PspEI	GGTNACC	1 cut(s)	916
PspFI	CCCAGC	1 cut(s)	695
PspGI	CCWGG	3 cut(s)	522, 555, 1927
PspN4I	GGNNCC	1 cut(s)	551
PspPI	GGNCC	4 cut(s)	571, 1788, 1840, 2053
PteI	GCGCGC	1 cut(s)	286
RsaI	GTAC	3 cut(s)	266, 272, 347
RsaNI	GTAC	3 cut(s)	265, 271, 346
RseI	CAYNNNNRTG	1 cut(s)	1909
SacI	GAGCTC	3 cut(s)	537, 591, 1542
SalI	GTCGAC	1 cut(s)	212
SaqAI	TTAA	4 cut(s)	1161, 1197, 1308, 1967
Sau3AI	GATC	4 cut(s)	175, 778, 787, 882
Sau96I	GGNCC	4 cut(s)	571, 1788, 1840, 2053
SchI	GAGTC	3 cut(s)	389, 707, 1157
ScrFI	CCNGG	6 cut(s)	524, 557, 1153, 1929, 2044, 2056
SduI	GDGCHC	6 cut(s)	537, 591, 1241, 1254, 1542, 1810
SfuI	TTCGAA	1 cut(s)	311
SgrAI	CRCCGGYG	1 cut(s)	670
SgrDI	CGTCGACG	1 cut(s)	212
SgsI	GGCGCGCC	1 cut(s)	286
SinI	GGWCC	2 cut(s)	571, 1840
SmiMI	CAYNNNNRTG	1 cut(s)	1909
Sse9I	AATT	6 cut(s)	1064, 1271, 1424, 1899, 1953, 2026
SspMI	CTAG	2 cut(s)	1326, 1575
SstI	GAGCTC	3 cut(s)	537, 591, 1542
StyD4I	CCNGG	6 cut(s)	522, 555, 1151, 1927, 2042, 2054
TaaI	ACNGT	7 cut(s)	88, 245, 519, 662, 1055, 1247, 1642
TaiI	ACGT	1 cut(s)	690
TaqI	TCGA	7 cut(s)	174, 213, 311, 881, 1404, 1822, 2001
TasI	AATT	6 cut(s)	1064, 1271, 1424, 1899, 1953, 2026
TatI	WGTACW	1 cut(s)	345
TfiI	GAWTC	5 cut(s)	544, 609, 676, 974, 1406
Tru1I	TTAA	4 cut(s)	1161, 1197, 1308, 1967
Tru9I	TTAA	4 cut(s)	1161, 1197, 1308, 1967
TscAI	CASTG	3 cut(s)	619, 1060, 1252
TseFI	GTSAC	2 cut(s)	662, 916
TseI	GCWGC	6 cut(s)	253, 256, 706, 998, 1004, 1678
Tsp45I	GTSAC	2 cut(s)	662, 916
TspDTI	ATGAA	5 cut(s)	115, 450, 1100, 1791, 1961
TspGWI	ACGGA	2 cut(s)	779, 2022
TspRI	CASTG	3 cut(s)	619, 1060, 1252
VpaK11BI	GGWCC	2 cut(s)	571, 1840
XagI	CCTNNNNNAGG	1 cut(s)	557
XmiI	GTMKAC	3 cut(s)	213, 528, 1848
XmnI	GAANNNNTTC	1 cut(s)	608
XspI	CTAG	2 cut(s)	1326, 1575

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.