Prupe.2G226200_v2.0.a1

exocyst complex component

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
25275488 .. 25277401
1914 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G226200.1

Sequence Viewer

Length: 1914 bp
ATGCTATCAGAGACCCCTAAGAGTGGTGCTGCTACACTCGCACCAAGAAAAGTAACGCCAAGCCGCTTTTTCTTCCAATCTACCAAAACCAACTCTTCTTCTTCACATTCACTTTCAAGCTCTTGCACTGCTTCAACCCCTTCCCGCAGCTTCTCTCTACTGATGATGGAAGAAAACATCGCAATTGCTGAATCCATCATCACCAAATGGGATCCAAACTCTTCCTCATACACCAAAATCACTTTTCTGTTCCAGCATAGCAGAAAAGAAGCCAAAGAGTTCCTCAAATCCGTAAACTACTTGCGTAGTGCTATGCATGTTTTAGTTGGTGGAAGCTCAGCCAGCAAGCTTGTACTTGCTCAAAATCTAATGCAAACAGCGATGAAAAGGCTTGAAAAAGAGTTTTACCAGATATTGTCTGCAAACCGGGATCACCTTGACCCTGAATCGGTTTCAAGTCGATCCTCAGGATCAGCCAAATTTTATAATGCAGACGAGGCTGGATCAGAAGACGAGTTGGAAATTGTTGGTGAGTCAATCACAGAGGTTGAGAGAGCCTCAGCATTTGCCATGTCAGACCTGAAGTCAATAGCTGATTGTATGATCAGTTCTGGCTATGGTATAGAGTGCGTGAAGATATACAAAATTATCCGGAAGTCAATAGTGGATGGAGGATTGTTTCGCCTTGGAATCCAACAGTTCAAATCTCCGCAAGTTCATAAAATGGATTTGGAAGGACTAGAAAGCATACTCAGGAACTGGATGGATGCTGTAAAGATTGCTGTGAAAGCACTATTTCGTGGAGAAAAATATCTCTGTGATCATGTGTTTTCAGCATCTGAGAATATCAAAGAGTCATGCTTCTATGAGATAACCAAAGAAGGAGCCACCACCCTATTCAGATTTCCTGAACTCATTGTGAAGAACAAGAAAGCCCCAGAAAGAATTTTCTGGCAACTGGAAATCTATGAAGCAGTCTCTGATCTTTGGCCGGAGATTGAATCTATATTCGACTCTGAATCAACCCAAGCTATAAAGCTACAAGCTCTTTCATCATGGCTCAAACTTTCAGATTCTGTTCGGACCATTCTTTCCGACTTCGAATCAACAATTCAAAAGGACTCATCAAAGATTCTAGTTTTCGGAGGCGGGATTCACCCACTTACCCAATCAGTGATGAACTATGTATCTTCACTAGCAGATTACTATGGAGTTCTCTCTGATATCCTTGCTGACCATCCACCACCAGGGAATTCATCATTTCAAGAATTCAAAAGCGTAGTGTCAGATGACTGTTCAACACCAGAAGTGTCAGTCCACCTAGCTTGGCTCATTTTAGTCCTTTTGTGCAAGCTTGACATCAAAGCTGAGATTTATAAAGATGTGTCTTTGTCATATCTCTTCCTTGCCAACAATCTTCACTTCATTGTTGAGAAGGTGAACAACACACCCAACCTGAAACTCCTCCTTGGTAAAGATTGGGTATCTGAACACATGAAGAAGGTTAAACTGTATGCTTCAAACTACGAAACCACAGCGTGGACAAAGGTGTTATCATCATTACCAGAGAGGTCAGCAGACATATCTCCTGAAATGGCAAAGGAGTGTTTTAGGAAGTTCAACACAGCGTTTGAAGAGGCATATAGGAAACAGACATCCTGGATTGTAGAGGATGGGAAGTTGAGGAATGACTTGAAGGTGTCAATTTCACAGAAACTAGTACCAACCTATCAAGAATTCTACGACACATACATGGTGATGCTAAGTGGGGAGAAAAATATGGAGTTGTTGGCAAGAGTTTCACCAAATGACTTGGGGAATTACTTGTCTGATTTGTTCCATGGGACTTCCGCCTCAGTTAGTTCTACCACTTCATCTTCATTGGTGCCTTCTCAGAGATGCTTCCTCATCTAA

Protein Analysis

638

Amino Acids

71.44

Weight (kDa)

6.04

Isoelectric Point (pI)

46.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012877)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 486, 1377
AccB1I GGYRCC 1 cut(s) 1885
AccB7I CCANNNNNTGG 1 cut(s) 1539
AccIII TCCGGA 1 cut(s) 651
AciI CCGC 5 cut(s) 64, 145, 710, 1149, 1851
AclWI GGATC 6 cut(s) 206, 219, 438, 456, 478, 511
AcoI YGGCCR 1 cut(s) 989
AcsI RAATTY 5 cut(s) 479, 945, 1252, 1268, 1736
AcuI CTGAAG 1 cut(s) 602
AdeI CACNNNGTG 1 cut(s) 1539
AfaI GTAC 2 cut(s) 354, 1722
AfiI CCNNNNNNNGG 4 cut(s) 23, 448, 1247, 1539
AhdI GACNNNNNGTC 1 cut(s) 583
AhlI ACTAGT 1 cut(s) 1717
AjnI CCWGG 2 cut(s) 1246, 1658
Alw26I GTCTC 2 cut(s) 5, 982
AlwI GGATC 6 cut(s) 206, 219, 438, 456, 478, 511
AlwNI CAGNNNCTG 4 cut(s) 759, 839, 980, 1076
Aor13HI TCCGGA 1 cut(s) 651
AoxI GGCC 1 cut(s) 989
ApeKI GCWGC 2 cut(s) 29, 147
ApoI RAATTY 5 cut(s) 479, 945, 1252, 1268, 1736
AspS9I GGNCC 1 cut(s) 1083
AsuC2I CCSGG 1 cut(s) 428
AsuHPI GGTGA 7 cut(s) 193, 425, 542, 1148, 1450, 1768, 1794
AsuII TTCGAA 1 cut(s) 1101
AvaII GGWCC 1 cut(s) 1083
AxyI CCTNAGG 1 cut(s) 466
BamHI GGATCC 1 cut(s) 211
BanI GGYRCC 1 cut(s) 1885
BbsI GAAGAC 1 cut(s) 516
BbvCI CCTCAGC 1 cut(s) 559
BbvI GCAGC 2 cut(s) 16, 159
BccI CCATC 6 cut(s) 160, 203, 662, 757, 1245, 1667
BciT130I CCWGG 2 cut(s) 1248, 1660
BclI TGATCA 2 cut(s) 603, 820
BcnI CCSGG 1 cut(s) 428
BcoDI GTCTC 2 cut(s) 5, 982
BcuI ACTAGT 1 cut(s) 1717
BfaI CTAG 5 cut(s) 740, 1136, 1196, 1322, 1718
BisI GCNGC 3 cut(s) 30, 64, 148
BlpI GCTNAGC 1 cut(s) 337
BlsI GCNGC 3 cut(s) 31, 65, 149
Bme1390I CCNGG 3 cut(s) 428, 1248, 1660
Bme18I GGWCC 1 cut(s) 1083
BmeRI GACNNNNNGTC 1 cut(s) 583
BmgT120I GGNCC 1 cut(s) 1083
BmiI GGNNCC 3 cut(s) 213, 886, 1887
BmrFI CCNGG 3 cut(s) 428, 1248, 1660
BmsI GCATC 4 cut(s) 757, 845, 1749, 1889
BpiI GAAGAC 1 cut(s) 516
BplI GAGNNNNNCTC 2 cut(s) 542, 574
Bpu10I CCTNAGC 1 cut(s) 559
Bpu1102I GCTNAGC 1 cut(s) 337
Bpu14I TTCGAA 1 cut(s) 1101
BpuMI CCSGG 1 cut(s) 428
BsaI GGTCTC 1 cut(s) 5
BsaJI CCNNGG 4 cut(s) 685, 1247, 1468, 1840
BsaWI WCCGGW 1 cut(s) 651
Bsc4I CCNNNNNNNGG 4 cut(s) 23, 448, 1247, 1539
Bse1I ACTGG 2 cut(s) 764, 963
Bse21I CCTNAGG 1 cut(s) 466
BseAI TCCGGA 1 cut(s) 651
BseBI CCWGG 2 cut(s) 1248, 1660
BseDI CCNNGG 4 cut(s) 685, 1247, 1468, 1840
BseGI GGATG 6 cut(s) 673, 768, 772, 1237, 1655, 1678
BseLI CCNNNNNNNGG 4 cut(s) 23, 448, 1247, 1539
BseMII CTCAG 8 cut(s) 351, 480, 573, 766, 831, 1359, 1869, 1907
BseNI ACTGG 2 cut(s) 764, 963
BseRI GAGGAG 1 cut(s) 1454
BseXI GCAGC 2 cut(s) 16, 159
BshFI GGCC 1 cut(s) 991
BshNI GGYRCC 1 cut(s) 1885
BsiSI CCGG 3 cut(s) 427, 652, 992
BslFI GGGAC 1 cut(s) 1858
BslI CCNNNNNNNGG 4 cut(s) 23, 448, 1247, 1539
BsmAI GTCTC 2 cut(s) 5, 982
BsmFI GGGAC 1 cut(s) 1858
BsnI GGCC 1 cut(s) 991
Bso31I GGTCTC 1 cut(s) 5
Bsp119I TTCGAA 1 cut(s) 1101
Bsp13I TCCGGA 1 cut(s) 651
Bsp143I GATC 8 cut(s) 211, 430, 461, 470, 503, 603, 820, 982
Bsp1720I GCTNAGC 1 cut(s) 337
Bsp19I CCATGG 1 cut(s) 1840
BspACI CCGC 5 cut(s) 64, 145, 710, 1149, 1851
BspANI GGCC 1 cut(s) 991
BspCNI CTCAG 8 cut(s) 350, 479, 572, 765, 832, 1360, 1868, 1906
BspEI TCCGGA 1 cut(s) 651
BspLI GGNNCC 3 cut(s) 213, 886, 1887
BspPI GGATC 6 cut(s) 206, 219, 438, 456, 478, 511
BspT104I TTCGAA 1 cut(s) 1101
BspT107I GGYRCC 1 cut(s) 1885
BspTNI GGTCTC 1 cut(s) 5
BsrI ACTGG 2 cut(s) 764, 963
BssECI CCNNGG 4 cut(s) 685, 1247, 1468, 1840
BssMI GATC 8 cut(s) 211, 430, 461, 470, 503, 603, 820, 982
BssT1I CCWWGG 3 cut(s) 685, 1468, 1840
Bst2UI CCWGG 2 cut(s) 1248, 1660
Bst4CI ACNGT 3 cut(s) 699, 1295, 1512
Bst6I CTCTTC 4 cut(s) 100, 226, 1406, 1629
BstBI TTCGAA 1 cut(s) 1101
BstC8I GCNNGC 3 cut(s) 343, 347, 1352
BstDSI CCRYGG 1 cut(s) 1840
BstF5I GGATG 6 cut(s) 673, 768, 772, 1237, 1655, 1678
BstKTI GATC 8 cut(s) 214, 433, 464, 473, 506, 606, 823, 985
BstMAI GTCTC 2 cut(s) 5, 982
BstMBI GATC 8 cut(s) 211, 430, 461, 470, 503, 603, 820, 982
BstMWI GCNNNNNNNGC 4 cut(s) 38, 342, 497, 788
BstNI CCWGG 2 cut(s) 1248, 1660
BstNSI RCATGY 1 cut(s) 320
BstSCI CCNGG 3 cut(s) 426, 1246, 1658
BstV1I GCAGC 2 cut(s) 16, 159
BstV2I GAAGAC 1 cut(s) 516
BstX2I RGATCY 1 cut(s) 211
BstYI RGATCY 1 cut(s) 211
Bsu36I CCTNAGG 1 cut(s) 466
BsuRI GGCC 1 cut(s) 991
BtgI CCRYGG 1 cut(s) 1840
BtgZI GCGATG 2 cut(s) 163, 395
BtsCI GGATG 6 cut(s) 673, 768, 772, 1237, 1655, 1678
BtsI GCAGTG 1 cut(s) 126
BtsIMutI CAGTG 2 cut(s) 126, 1179
Cac8I GCNNGC 3 cut(s) 343, 347, 1352
CaiI CAGNNNCTG 4 cut(s) 759, 839, 980, 1076
Cfr13I GGNCC 1 cut(s) 1083
Csp6I GTAC 2 cut(s) 353, 1721
CspCI CAANNNNNGTGG 2 cut(s) 1307, 1342
CviAII CATG 8 cut(s) 317, 571, 824, 858, 1056, 1495, 1753, 1841
CviQI GTAC 2 cut(s) 353, 1721
DpnI GATC 8 cut(s) 213, 432, 463, 472, 505, 605, 822, 984
DpnII GATC 8 cut(s) 211, 430, 461, 470, 503, 603, 820, 982
DraIII CACNNNGTG 1 cut(s) 1539
DriI GACNNNNNGTC 1 cut(s) 583
EaeI YGGCCR 1 cut(s) 989
Eam1104I CTCTTC 4 cut(s) 100, 226, 1406, 1629
Eam1105I GACNNNNNGTC 1 cut(s) 583
EarI CTCTTC 4 cut(s) 100, 226, 1406, 1629
EciI GGCGGA 1 cut(s) 1840
Eco130I CCWWGG 3 cut(s) 685, 1468, 1840
Eco31I GGTCTC 1 cut(s) 5
Eco32I GATATC 1 cut(s) 1225
Eco47I GGWCC 1 cut(s) 1083
Eco57I CTGAAG 1 cut(s) 602
Eco81I CCTNAGG 1 cut(s) 466
EcoRI GAATTC 3 cut(s) 1252, 1268, 1736
EcoRII CCWGG 2 cut(s) 1246, 1658
EcoRV GATATC 1 cut(s) 1225
EcoT14I CCWWGG 3 cut(s) 685, 1468, 1840
EcoT22I ATGCAT 1 cut(s) 318
ErhI CCWWGG 3 cut(s) 685, 1468, 1840
FaeI CATG 8 cut(s) 320, 574, 827, 861, 1059, 1498, 1756, 1844
FaqI GGGAC 1 cut(s) 1858
FatI CATG 8 cut(s) 316, 570, 823, 857, 1055, 1494, 1752, 1840
FauI CCCGC 2 cut(s) 152, 1142
FbaI TGATCA 2 cut(s) 603, 820
Fnu4HI GCNGC 3 cut(s) 30, 64, 148
FokI GGATG 6 cut(s) 680, 775, 779, 1224, 1642, 1685
Fsp4HI GCNGC 3 cut(s) 30, 64, 148
FspBI CTAG 5 cut(s) 740, 1136, 1196, 1322, 1718
GluI GCNGC 3 cut(s) 30, 64, 148
HaeIII GGCC 1 cut(s) 991
HapII CCGG 3 cut(s) 427, 652, 992
Hin1II CATG 8 cut(s) 320, 574, 827, 861, 1059, 1498, 1756, 1844
HindIII AAGCTT 2 cut(s) 347, 1352
HpaII CCGG 3 cut(s) 427, 652, 992
HphI GGTGA 7 cut(s) 193, 425, 542, 1148, 1450, 1768, 1794
Hpy166II GTNNAC 4 cut(s) 295, 1318, 1441, 1542
Hpy188III TCNNGA 7 cut(s) 468, 652, 754, 908, 1265, 1589, 1733
Hpy8I GTNNAC 4 cut(s) 295, 1318, 1441, 1542
HpyAV CCTTC 7 cut(s) 150, 728, 875, 1429, 1495, 1690, 1899
HpyCH4III ACNGT 3 cut(s) 699, 1295, 1512
HpyCH4V TGCA 6 cut(s) 126, 316, 373, 422, 491, 1350
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 342, 497, 788
Hsp92II CATG 8 cut(s) 320, 574, 827, 861, 1059, 1498, 1756, 1844
Kpn2I TCCGGA 1 cut(s) 651
Ksp22I TGATCA 2 cut(s) 603, 820
Kzo9I GATC 8 cut(s) 211, 430, 461, 470, 503, 603, 820, 982
LmnI GCTCC 1 cut(s) 884
Lsp1109I GCAGC 2 cut(s) 16, 159
LweI GCATC 4 cut(s) 757, 845, 1749, 1889
MaeI CTAG 5 cut(s) 740, 1136, 1196, 1322, 1718
MaeIII GTNAC 1 cut(s) 52
MalI GATC 8 cut(s) 213, 432, 463, 472, 505, 605, 822, 984
MboI GATC 8 cut(s) 211, 430, 461, 470, 503, 603, 820, 982
MfeI CAATTG 1 cut(s) 183
MflI RGATCY 1 cut(s) 211
MlyI GAGTC 4 cut(s) 542, 863, 1007, 1115
MmeI TCCRAC 3 cut(s) 498, 718, 1119
Mph1103I ATGCAT 1 cut(s) 318
MroI TCCGGA 1 cut(s) 651
MseI TTAA 1 cut(s) 1506
MslI CAYNNNNRTG 2 cut(s) 1751, 1757
MspI CCGG 3 cut(s) 427, 652, 992
MspR9I CCNGG 3 cut(s) 428, 1248, 1660
MunI CAATTG 1 cut(s) 183
MvaI CCWGG 2 cut(s) 1248, 1660
MwoI GCNNNNNNNGC 4 cut(s) 38, 342, 497, 788
NciI CCSGG 1 cut(s) 428
NcoI CCATGG 1 cut(s) 1840
NdeII GATC 8 cut(s) 211, 430, 461, 470, 503, 603, 820, 982
NlaIII CATG 8 cut(s) 320, 574, 827, 861, 1059, 1498, 1756, 1844
NlaIV GGNNCC 3 cut(s) 213, 886, 1887
NsiI ATGCAT 1 cut(s) 318
NspI RCATGY 1 cut(s) 320
NspV TTCGAA 1 cut(s) 1101
PfeI GAWTC 9 cut(s) 191, 446, 690, 1001, 1019, 1073, 1103, 1132, 1153
PflMI CCANNNNNTGG 1 cut(s) 1539
PfoI TCCNGGA 1 cut(s) 1658
PkrI GCNGC 3 cut(s) 31, 65, 149
PleI GAGTC 4 cut(s) 541, 862, 1007, 1115
PpsI GAGTC 4 cut(s) 541, 862, 1007, 1115
PsiI TTATAA 2 cut(s) 486, 1377
Psp6I CCWGG 2 cut(s) 1246, 1658
PspGI CCWGG 2 cut(s) 1246, 1658
PspN4I GGNNCC 3 cut(s) 213, 886, 1887
PspPI GGNCC 1 cut(s) 1083
PsrI GAACNNNNNNTAC 2 cut(s) 592, 624
PstNI CAGNNNCTG 4 cut(s) 759, 839, 980, 1076
PsuI RGATCY 1 cut(s) 211
RsaI GTAC 2 cut(s) 354, 1722
RsaNI GTAC 2 cut(s) 353, 1721
RseI CAYNNNNRTG 2 cut(s) 1751, 1757
SaqAI TTAA 1 cut(s) 1506
SatI GCNGC 3 cut(s) 30, 64, 148
Sau3AI GATC 8 cut(s) 211, 430, 461, 470, 503, 603, 820, 982
Sau96I GGNCC 1 cut(s) 1083
SchI GAGTC 4 cut(s) 542, 863, 1007, 1115
ScrFI CCNGG 3 cut(s) 428, 1248, 1660
SfaNI GCATC 4 cut(s) 757, 845, 1749, 1889
SfuI TTCGAA 1 cut(s) 1101
SinI GGWCC 1 cut(s) 1083
SmiMI CAYNNNNRTG 2 cut(s) 1751, 1757
SpeI ACTAGT 1 cut(s) 1717
SsiI CCGC 5 cut(s) 64, 145, 710, 1149, 1851
SspMI CTAG 5 cut(s) 740, 1136, 1196, 1322, 1718
StyD4I CCNGG 3 cut(s) 426, 1246, 1658
StyI CCWWGG 3 cut(s) 685, 1468, 1840
TaaI ACNGT 3 cut(s) 699, 1295, 1512
TaqI TCGA 3 cut(s) 460, 1011, 1101
TatI WGTACW 1 cut(s) 352
TauI GCSGC 1 cut(s) 66
TfiI GAWTC 9 cut(s) 191, 446, 690, 1001, 1019, 1073, 1103, 1132, 1153
Tru1I TTAA 1 cut(s) 1506
Tru9I TTAA 1 cut(s) 1506
TscAI CASTG 2 cut(s) 133, 1179
TseI GCWGC 2 cut(s) 29, 147
TspGWI ACGGA 1 cut(s) 280
TspRI CASTG 2 cut(s) 133, 1179
Van91I CCANNNNNTGG 1 cut(s) 1539
VpaK11BI GGWCC 1 cut(s) 1083
XapI RAATTY 5 cut(s) 479, 945, 1252, 1268, 1736
XceI RCATGY 1 cut(s) 320
XspI CTAG 5 cut(s) 740, 1136, 1196, 1322, 1718
Zsp2I ATGCAT 1 cut(s) 318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.