Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002234

Physical Location & Seq

Genomic Coordinates Reverse (-)

44022864 .. 44025275

Gene Structure 2412 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0321100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1224 bp

ATGCTTCAACCGCAGATTGTACAATCCCCAGCTAGGCTAGGCCTATCGAACCCCAATTCACCTGCTTTTCAAAACCCTACCCCTCCAAAACTCCCTTTACAGCAGCAGCCTTCTTCTTCTGCTTCTGCTTCTTCTTCTTCACAGCATTCCAATCTCTCCCCATCGCTGCTCTCTCTCCTCTCGCCCCTCCCAAGAGCCCAATCCCTTCTAGTTCAAATGGCCTCCCTCGCGTCTAAACTCTTTGAAGTCTCACCTAATCGGTCCCTTTGGCTCAATGCATTCCGCGGTTCCTTCCCAACCTTCCTTTCTTCCCAAACCCAATCTCAGTTTTCAATCCCGCTTGAGAACTGTCCTTCCTCCACCAAAGATGTCCTCTCCCAGTTCACAGCTCTTCAAACCCAACTCTTTGAGGCTGTTGCTGAACTCCAAGAAATTCTTGATCTTCAGGACGCTAAGCTGAAAATTGCACATGAAGTACGGTCCAAGGATGTCTCACTTCTTGCCTTTTCCAAGAAACTCAAGGATGTTGAGCAGGTGCTTGATAATCTTGTTGATGATTACTCTGATTTGTCCCGCCCCAAAAGGGTAAAATTGGATGATGGTTCAGAAGATGATTCTTCATGCACTACTACTGTTTCATCTCAGTTGAATTTATCAGATATTTTGTCATACGCGCATCGGATAAGCTACACAACATTTGCACCACCAGAATTTGGGGCTGGACAGGCTCCTCTTCGCGGATCACTCCCACCTGCCCCGCAGGAGGAGCACATGCGTGCTTCTCAACTATACAATTTTGCAAACCTGGATGTTGGTTTGCCCAAGACTGTAGACAGCACGGAGAAAACAATTGAAGCAATCATGGAGCCCCCACATCCTGCTCCAACAGAAGCCAATCAAGCTCCAAACTTTGGTGCACTTCAAGGTCGGCTTCCTCCAAATATCACAATTCCGTCTGGTTGGAAACCTGGGATGCCTGTGGAGTTGCCTACCGATTTTCCTATGCCCCCACCTGGATGGAAGCCTGGGGACCCAGTGCCTTTGCCCCCAGTGGGATCTCTTCCAGTTCCTAAGGTCGAGGATCAACATTTACGGCCTAAACCTCAAGCAATGCATAAACCGCAAGAGCCAATACAAGTTATGCATGTTGAACTGGATATTCCTGATCAAGACGATAGTAGCGATTATAGTAGCGATGAAGGAAGCTTTGAAGATGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0001505 GO:0002237 GO:0002831 GO:0002833 GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005546 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005938 GO:0006810 GO:0006836 GO:0006887 GO:0006903 GO:0006904 GO:0007154 GO:0007267 GO:0007268 GO:0007269 GO:0008013 GO:0008150 GO:0008289 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009987 GO:0010033 GO:0016079 GO:0016080 GO:0016081 GO:0016192 GO:0017156 GO:0022406 GO:0023052 GO:0023061 GO:0031347 GO:0031349 GO:0031982 GO:0032101 GO:0032103 GO:0032940 GO:0032991 GO:0035091 GO:0042221 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0045055 GO:0046903 GO:0046907 GO:0048278 GO:0048489 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050896 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051704 GO:0051707 GO:0065007 GO:0065008 GO:0071944 GO:0080134 GO:0097479 GO:0097480 GO:0098916 GO:0099003 GO:0099023 GO:0099504 GO:0099536 GO:0099537 GO:0099568 GO:0099643 GO:0140029 GO:0140056 GO:1900424 GO:1900426 GO:1901981 GO:1902936

KEGG Pathways

Metabolic & Signaling

ko04910 map04910

Pfam Domains

Protein Families

Exo70

Protein Analysis

407

Amino Acids

44.36

Weight (kDa)

4.78

Isoelectric Point (pI)

72.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Med4	PF10018	124 - 285	2.7e-12	Vitamin-D-receptor interacting Mediator subunit 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002234)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39390 AT3G09500 AT3G55170 AT3G55170 AT3G55170 AT3G55170 AT3G55170 AT5G02610 AT5G02610
fragaria_vesca	FvH4_3g34730 FvH4_7g20960
malus_domestica	MD01G1119600.v1.1 MD03G1102300.v1.1 MD07G1188600.v1.1 MD11G1116100.v1.1
prunus_persica	Prupe.2G139200_v2.0.a1 Prupe.2G226300_v2.0.a1 Prupe.2G226300_v2.0.a1 Prupe.6G086600_v2.0.a1
pyrus_communis	pycom01g14620 pycom07g17870
rosa_chinensis	RchiOBHm_Chr1g0365321 RchiOBHm_Chr2g0098001 RchiOBHm_Chr5g0062471
rosa_laevigata	RLG00000027430 RLG00000035559
rosa_multiflora	Rmu_sc0004695.1_g000009 Rmu_sc0005277.1_g000021 Rmu_sc0010918.1_g000006
rosa_roxburghii	Rroxscaffold_1G00018140 Rroxscaffold_4G00279280 Rroxscaffold_4G00291310
rosa_rugosa	Rorug01G0321100 Rorug05G0349600
rosa_samantha	Rh1AG330000 Rh1BG291400 Rh1DG323100 Rh5BG423800 Rh5CG302300 Rh5CG447600 Rh5DG438300
rosa_wichuraiana	Rw1G029260 Rw5G038590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	70, 523, 760
Acc36I	ACCTGC	3 cut(s)	70, 523, 760
AccB7I	CCANNNNNTGG	2 cut(s)	713, 911
AccI	GTMKAC	1 cut(s)	831
AccII	CGCG	4 cut(s)	230, 285, 674, 738
AciI	CCGC	8 cut(s)	11, 283, 285, 338, 574, 738, 758, 1121
AclWI	GGATC	3 cut(s)	748, 1063, 1089
AcsI	RAATTY	3 cut(s)	432, 649, 710
AcuI	CTGAAG	1 cut(s)	428
AfaI	GTAC	2 cut(s)	21, 477
AfiI	CCNNNNNNNGG	8 cut(s)	33, 583, 713, 737, 763, 911, 1013, 1052
AjnI	CCWGG	4 cut(s)	804, 967, 1012, 1024
AjuI	GAANNNNNNNTTGG	2 cut(s)	289, 321
AleI	CACNNNNGTG	1 cut(s)	774
AloI	GAACNNNNNNTCC	2 cut(s)	338, 370
AluBI	AGCT	6 cut(s)	32, 389, 457, 687, 902, 1206
AluI	AGCT	6 cut(s)	32, 389, 457, 687, 902, 1206
Alw21I	GWGCWC	2 cut(s)	771, 919
Alw26I	GTCTC	2 cut(s)	253, 496
Alw44I	GTGCAC	1 cut(s)	915
AlwI	GGATC	3 cut(s)	748, 1063, 1089
AoxI	GGCC	3 cut(s)	40, 219, 1094
ApaLI	GTGCAC	1 cut(s)	915
ApeKI	GCWGC	3 cut(s)	103, 106, 166
ApoI	RAATTY	3 cut(s)	432, 649, 710
AspLEI	GCGC	1 cut(s)	676
AspS9I	GGNCC	3 cut(s)	261, 480, 1030
AsuHPI	GGTGA	2 cut(s)	51, 243
AvaII	GGWCC	3 cut(s)	261, 480, 1030
AxyI	CCTNAGG	1 cut(s)	1071
BaeGI	GKGCMC	1 cut(s)	919
BanII	GRGCYC	2 cut(s)	199, 870
Bbv12I	GWGCWC	2 cut(s)	771, 919
BbvI	GCAGC	3 cut(s)	115, 118, 153
BccI	CCATC	3 cut(s)	169, 593, 1011
BceAI	ACGGC	1 cut(s)	1109
BciT130I	CCWGG	4 cut(s)	806, 969, 1014, 1026
BclI	TGATCA	1 cut(s)	1165
BcoDI	GTCTC	2 cut(s)	253, 496
BfaI	CTAG	3 cut(s)	33, 38, 209
BfmI	CTRYAG	1 cut(s)	828
BfuAI	ACCTGC	3 cut(s)	70, 523, 760
BisI	GCNGC	3 cut(s)	104, 107, 167
BlpI	GCTNAGC	1 cut(s)	453
BlsI	GCNGC	3 cut(s)	105, 108, 168
Bme1390I	CCNGG	4 cut(s)	806, 969, 1014, 1026
Bme18I	GGWCC	3 cut(s)	261, 480, 1030
BmgT120I	GGNCC	3 cut(s)	261, 480, 1030
BmiI	GGNNCC	6 cut(s)	263, 289, 729, 867, 1031, 1032
BmrFI	CCNGG	4 cut(s)	806, 969, 1014, 1026
BmrI	ACTGGG	3 cut(s)	373, 1028, 1043
BmsI	GCATC	2 cut(s)	685, 963
BmuI	ACTGGG	3 cut(s)	373, 1028, 1043
Bpu1102I	GCTNAGC	1 cut(s)	453
BpuEI	CTTGAG	3 cut(s)	362, 503, 1089
BsaJI	CCNNGG	4 cut(s)	283, 483, 968, 1025
Bsc4I	CCNNNNNNNGG	8 cut(s)	33, 583, 713, 737, 763, 911, 1013, 1052
Bse1I	ACTGG	5 cut(s)	379, 1034, 1049, 1064, 1158
Bse21I	CCTNAGG	1 cut(s)	1071
Bse3DI	GCAATG	1 cut(s)	1116
BseBI	CCWGG	4 cut(s)	806, 969, 1014, 1026
BseDI	CCNNGG	4 cut(s)	283, 483, 968, 1025
BseGI	GGATG	7 cut(s)	493, 529, 601, 814, 874, 978, 1022
BseLI	CCNNNNNNNGG	8 cut(s)	33, 583, 713, 737, 763, 911, 1013, 1052
BseMI	GCAATG	1 cut(s)	1116
BseMII	CTCAG	2 cut(s)	338, 656
BseNI	ACTGG	5 cut(s)	379, 1034, 1049, 1064, 1158
BseRI	GAGGAG	3 cut(s)	167, 720, 779
BseSI	GKGCMC	1 cut(s)	919
BseXI	GCAGC	3 cut(s)	115, 118, 153
BseYI	CCCAGC	1 cut(s)	28
Bsh1236I	CGCG	4 cut(s)	230, 285, 674, 738
BshFI	GGCC	3 cut(s)	42, 221, 1096
BsiHKAI	GWGCWC	2 cut(s)	771, 919
BslFI	GGGAC	3 cut(s)	247, 556, 1043
BslI	CCNNNNNNNGG	8 cut(s)	33, 583, 713, 737, 763, 911, 1013, 1052
BsmAI	GTCTC	2 cut(s)	253, 496
BsmFI	GGGAC	3 cut(s)	247, 556, 1043
BsmI	GAATGC	2 cut(s)	145, 278
BsnI	GGCC	3 cut(s)	42, 221, 1096
Bsp1286I	GDGCHC	4 cut(s)	199, 771, 870, 919
Bsp1407I	TGTACA	1 cut(s)	19
Bsp143I	GATC	5 cut(s)	439, 740, 1055, 1081, 1165
Bsp1720I	GCTNAGC	1 cut(s)	453
BspACI	CCGC	8 cut(s)	11, 283, 285, 338, 574, 738, 758, 1121
BspANI	GGCC	3 cut(s)	42, 221, 1096
BspCNI	CTCAG	2 cut(s)	337, 655
BspFNI	CGCG	4 cut(s)	230, 285, 674, 738
BspLI	GGNNCC	6 cut(s)	263, 289, 729, 867, 1031, 1032
BspMI	ACCTGC	3 cut(s)	70, 523, 760
BspPI	GGATC	3 cut(s)	748, 1063, 1089
BspQI	GCTCTTC	1 cut(s)	396
BsrDI	GCAATG	1 cut(s)	1116
BsrGI	TGTACA	1 cut(s)	19
BsrI	ACTGG	5 cut(s)	379, 1034, 1049, 1064, 1158
BssECI	CCNNGG	4 cut(s)	283, 483, 968, 1025
BssMI	GATC	5 cut(s)	439, 740, 1055, 1081, 1165
BssT1I	CCWWGG	1 cut(s)	483
Bst2UI	CCWGG	4 cut(s)	806, 969, 1014, 1026
Bst4CI	ACNGT	4 cut(s)	350, 480, 634, 829
Bst6I	CTCTTC	3 cut(s)	396, 738, 1065
BstAUI	TGTACA	1 cut(s)	19
BstC8I	GCNNGC	1 cut(s)	777
BstDEI	CTNAG	4 cut(s)	324, 453, 642, 1071
BstDSI	CCRYGG	1 cut(s)	283
BstF5I	GGATG	7 cut(s)	493, 529, 601, 814, 874, 978, 1022
BstFNI	CGCG	4 cut(s)	230, 285, 674, 738
BstHHI	GCGC	1 cut(s)	676
BstKTI	GATC	5 cut(s)	442, 743, 1058, 1084, 1168
BstMAI	GTCTC	2 cut(s)	253, 496
BstMBI	GATC	5 cut(s)	439, 740, 1055, 1081, 1165
BstMWI	GCNNNNNNNGC	6 cut(s)	10, 227, 725, 766, 899, 1120
BstNI	CCWGG	4 cut(s)	806, 969, 1014, 1026
BstNSI	RCATGY	2 cut(s)	775, 1148
BstSCI	CCNGG	4 cut(s)	804, 967, 1012, 1024
BstSFI	CTRYAG	1 cut(s)	828
BstSLI	GKGCMC	1 cut(s)	919
BstUI	CGCG	4 cut(s)	230, 285, 674, 738
BstV1I	GCAGC	3 cut(s)	115, 118, 153
BstX2I	RGATCY	1 cut(s)	1055
BstXI	CCANNNNNNTGG	1 cut(s)	1017
BstYI	RGATCY	1 cut(s)	1055
Bsu36I	CCTNAGG	1 cut(s)	1071
BsuRI	GGCC	3 cut(s)	42, 221, 1096
BtgI	CCRYGG	1 cut(s)	283
BtgZI	GCGATG	2 cut(s)	147, 1209
BtsCI	GGATG	7 cut(s)	493, 529, 601, 814, 874, 978, 1022
BtsIMutI	CAGTG	2 cut(s)	1041, 1056
BveI	ACCTGC	3 cut(s)	70, 523, 760
Cac8I	GCNNGC	1 cut(s)	777
CfoI	GCGC	1 cut(s)	676
Cfr13I	GGNCC	3 cut(s)	261, 480, 1030
Cfr42I	CCGCGG	1 cut(s)	286
CseI	GACGC	2 cut(s)	219, 458
Csp6I	GTAC	2 cut(s)	20, 476
CviAII	CATG	5 cut(s)	470, 621, 772, 862, 1145
CviQI	GTAC	2 cut(s)	20, 476
DdeI	CTNAG	4 cut(s)	324, 453, 642, 1071
DpnI	GATC	5 cut(s)	441, 742, 1057, 1083, 1167
DpnII	GATC	5 cut(s)	439, 740, 1055, 1081, 1165
Eam1104I	CTCTTC	3 cut(s)	396, 738, 1065
EarI	CTCTTC	3 cut(s)	396, 738, 1065
Eco130I	CCWWGG	1 cut(s)	483
Eco147I	AGGCCT	1 cut(s)	42
Eco24I	GRGCYC	2 cut(s)	199, 870
Eco47I	GGWCC	3 cut(s)	261, 480, 1030
Eco57I	CTGAAG	1 cut(s)	428
Eco81I	CCTNAGG	1 cut(s)	1071
EcoO109I	RGGNCCY	1 cut(s)	1030
EcoRII	CCWGG	4 cut(s)	804, 967, 1012, 1024
EcoT14I	CCWWGG	1 cut(s)	483
EcoT22I	ATGCAT	3 cut(s)	280, 1116, 1146
EcoT38I	GRGCYC	2 cut(s)	199, 870
ErhI	CCWWGG	1 cut(s)	483
FaeI	CATG	5 cut(s)	473, 624, 775, 865, 1148
FalI	AAGNNNNNCTT	4 cut(s)	420, 452, 915, 947
FaqI	GGGAC	3 cut(s)	247, 556, 1043
FatI	CATG	5 cut(s)	469, 620, 771, 861, 1144
FauI	CCCGC	3 cut(s)	345, 581, 765
FbaI	TGATCA	1 cut(s)	1165
FblI	GTMKAC	1 cut(s)	831
Fnu4HI	GCNGC	3 cut(s)	104, 107, 167
FokI	GGATG	7 cut(s)	500, 536, 608, 821, 861, 985, 1029
FriOI	GRGCYC	2 cut(s)	199, 870
Fsp4HI	GCNGC	3 cut(s)	104, 107, 167
FspBI	CTAG	3 cut(s)	33, 38, 209
GlaI	GCGC	1 cut(s)	675
GluI	GCNGC	3 cut(s)	104, 107, 167
GsaI	CCCAGC	1 cut(s)	32
HaeIII	GGCC	3 cut(s)	42, 221, 1096
HgaI	GACGC	2 cut(s)	219, 458
HhaI	GCGC	1 cut(s)	676
Hin1II	CATG	5 cut(s)	473, 624, 775, 865, 1148
Hin6I	GCGC	1 cut(s)	674
HinP1I	GCGC	1 cut(s)	674
HindIII	AAGCTT	1 cut(s)	1204
HinfI	GANTC	1 cut(s)	614
HphI	GGTGA	2 cut(s)	51, 243
Hpy166II	GTNNAC	3 cut(s)	384, 832, 917
Hpy188I	TCNGA	4 cut(s)	565, 607, 658, 681
Hpy188III	TCNNGA	4 cut(s)	437, 446, 1163, 1169
Hpy8I	GTNNAC	3 cut(s)	384, 832, 917
HpyAV	CCTTC	6 cut(s)	120, 215, 301, 310, 363, 1193
HpyCH4III	ACNGT	4 cut(s)	350, 480, 634, 829
HpyCH4V	TGCA	8 cut(s)	278, 467, 624, 701, 800, 917, 1114, 1144
HpyF10VI	GCNNNNNNNGC	6 cut(s)	10, 227, 725, 766, 899, 1120
HpyF3I	CTNAG	4 cut(s)	324, 453, 642, 1071
Hsp92II	CATG	5 cut(s)	473, 624, 775, 865, 1148
HspAI	GCGC	1 cut(s)	674
KflI	GGGWCCC	1 cut(s)	1030
Ksp22I	TGATCA	1 cut(s)	1165
KspI	CCGCGG	1 cut(s)	286
Kzo9I	GATC	5 cut(s)	439, 740, 1055, 1081, 1165
LguI	GCTCTTC	1 cut(s)	396
LmnI	GCTCC	5 cut(s)	733, 766, 865, 886, 907
Lsp1109I	GCAGC	3 cut(s)	115, 118, 153
LweI	GCATC	2 cut(s)	685, 963
MaeI	CTAG	3 cut(s)	33, 38, 209
MalI	GATC	5 cut(s)	441, 742, 1057, 1083, 1167
MboI	GATC	5 cut(s)	439, 740, 1055, 1081, 1165
MfeI	CAATTG	1 cut(s)	849
MflI	RGATCY	1 cut(s)	1055
MhlI	GDGCHC	4 cut(s)	199, 771, 870, 919
MluCI	AATT	9 cut(s)	55, 432, 462, 590, 649, 710, 793, 849, 948
MmeI	TCCRAC	2 cut(s)	908, 941
Mph1103I	ATGCAT	3 cut(s)	280, 1116, 1146
MslI	CAYNNNNRTG	2 cut(s)	774, 1015
MspA1I	CMGCKG	1 cut(s)	285
MspR9I	CCNGG	4 cut(s)	806, 969, 1014, 1026
MunI	CAATTG	1 cut(s)	849
Mva1269I	GAATGC	2 cut(s)	145, 278
MvaI	CCWGG	4 cut(s)	806, 969, 1014, 1026
MvnI	CGCG	4 cut(s)	230, 285, 674, 738
MwoI	GCNNNNNNNGC	6 cut(s)	10, 227, 725, 766, 899, 1120
NdeII	GATC	5 cut(s)	439, 740, 1055, 1081, 1165
NlaIII	CATG	5 cut(s)	473, 624, 775, 865, 1148
NlaIV	GGNNCC	6 cut(s)	263, 289, 729, 867, 1031, 1032
NsiI	ATGCAT	3 cut(s)	280, 1116, 1146
NspI	RCATGY	2 cut(s)	775, 1148
OliI	CACNNNNGTG	1 cut(s)	774
PaqCI	CACCTGC	3 cut(s)	70, 523, 760
PceI	AGGCCT	1 cut(s)	42
PciSI	GCTCTTC	1 cut(s)	396
PcsI	WCGNNNNNNNCGW	1 cut(s)	1179
PctI	GAATGC	2 cut(s)	145, 278
PfeI	GAWTC	1 cut(s)	614
PflMI	CCANNNNNTGG	2 cut(s)	713, 911
PkrI	GCNGC	3 cut(s)	105, 108, 168
PpuMI	RGGWCCY	1 cut(s)	1030
Psp5II	RGGWCCY	1 cut(s)	1030
Psp6I	CCWGG	4 cut(s)	804, 967, 1012, 1024
PspFI	CCCAGC	1 cut(s)	28
PspGI	CCWGG	4 cut(s)	804, 967, 1012, 1024
PspN4I	GGNNCC	6 cut(s)	263, 289, 729, 867, 1031, 1032
PspPI	GGNCC	3 cut(s)	261, 480, 1030
PspPPI	RGGWCCY	1 cut(s)	1030
PsuI	RGATCY	1 cut(s)	1055
RsaI	GTAC	2 cut(s)	21, 477
RsaNI	GTAC	2 cut(s)	20, 476
RseI	CAYNNNNRTG	2 cut(s)	774, 1015
SacII	CCGCGG	1 cut(s)	286
SapI	GCTCTTC	1 cut(s)	396
SatI	GCNGC	3 cut(s)	104, 107, 167
Sau3AI	GATC	5 cut(s)	439, 740, 1055, 1081, 1165
Sau96I	GGNCC	3 cut(s)	261, 480, 1030
ScrFI	CCNGG	4 cut(s)	806, 969, 1014, 1026
SduI	GDGCHC	4 cut(s)	199, 771, 870, 919
SfaNI	GCATC	2 cut(s)	685, 963
SfcI	CTRYAG	1 cut(s)	828
Sfr303I	CCGCGG	1 cut(s)	286
SgrBI	CCGCGG	1 cut(s)	286
SinI	GGWCC	3 cut(s)	261, 480, 1030
SmiMI	CAYNNNNRTG	2 cut(s)	774, 1015
SmlI	CTYRAG	3 cut(s)	341, 518, 1104
SmoI	CTYRAG	3 cut(s)	341, 518, 1104
Sse9I	AATT	9 cut(s)	55, 432, 462, 590, 649, 710, 793, 849, 948
SseBI	AGGCCT	1 cut(s)	42
SsiI	CCGC	8 cut(s)	11, 283, 285, 338, 574, 738, 758, 1121
SspMI	CTAG	3 cut(s)	33, 38, 209
StuI	AGGCCT	1 cut(s)	42
StyD4I	CCNGG	4 cut(s)	804, 967, 1012, 1024
StyI	CCWWGG	1 cut(s)	483
TaaI	ACNGT	4 cut(s)	350, 480, 634, 829
TaqI	TCGA	2 cut(s)	47, 1077
TaqII	GACCGA	1 cut(s)	249
TasI	AATT	9 cut(s)	55, 432, 462, 590, 649, 710, 793, 849, 948
TatI	WGTACW	1 cut(s)	19
TfiI	GAWTC	1 cut(s)	614
TscAI	CASTG	2 cut(s)	1041, 1056
TseI	GCWGC	3 cut(s)	103, 106, 166
TspDTI	ATGAA	4 cut(s)	486, 609, 627, 1212
TspGWI	ACGGA	2 cut(s)	854, 942
TspRI	CASTG	2 cut(s)	1041, 1056
Van91I	CCANNNNNTGG	2 cut(s)	713, 911
VneI	GTGCAC	1 cut(s)	915
VpaK11BI	GGWCC	3 cut(s)	261, 480, 1030
XapI	RAATTY	3 cut(s)	432, 649, 710
XceI	RCATGY	2 cut(s)	775, 1148
XmiI	GTMKAC	1 cut(s)	831
XspI	CTAG	3 cut(s)	33, 38, 209
Zsp2I	ATGCAT	3 cut(s)	280, 1116, 1146

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.