Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002234

Physical Location & Seq

Genomic Coordinates Reverse (-)

43380101 .. 43391104

Gene Structure 11004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0349600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGACGATGGGGAACCTTGTTGAGGAGGAGGACCACCATCAAAACAATAACATCGACCAGTTTGGTCCTTTCTCGACGCATTTCCAGAAGGACACAGTGCTTAAAAATCAAAATAATAACATGGCCATTGGGAACATTGAGAACAGAAGTGCTGAGCTGCAGGACAAGTTAAAGCCATTGGATGAGGATATGAAGATTGGGAATTTCGGCCCTTCGTTGGAAGAAGATGGCATTATTCTTCCAGTCACCTCTTTCTCTACTTTCTTTAAGAAAAATGAAGAAATATATCTGCAAAACGCTTGGCCTACGGTGAAATCTGCTTTAGAAGACTATGGTATTTCGTGCGCACTGAATTTGGTTGAGGGTTCCATGACAGTTTCAACAACAACAAAGACTAGGGACCCAGATATTATTGAAAAGGCCAAGGAGCTTACTGAACTTTTGTCATTATCTGTTCCCGCAGATGAGGCAATAAGAATACTGGATGCCAAAATGAAATGTGATTTCATTGAGATTGGAACAAAGAGAGGTGGGCTATGCGTAAAATATGGGATCGACATGGAGCAATTTCGTGAACGGTGGGAACGTTTCCTAGGCCCCAAGAACACCGGCTTGAAGACAATTCAGCATCTGACAGGCTGCAGTGTTTTCTTTCATGGAAATTTCACTGTTGCTGTAATTGGTAAATTTGAAGGATTAAAGATGGTCAGGAGGATTGTGGTAGACTGCATTCGAAATAAAATGCGTCCTAGTGTCCATATCAGAAGGCTTCGGATGAATCAAAATGAGCACAAACTTACGAAGAAGCTATTTGATCAAGGTGGATATAGATCTATCATGGAGGCATCAGTATTCATGAAAACCTCATTTGATTTTCATGAACATATATCTACAAAGTTTGTGGAAGCACTGCATCAGATACAAGATTCAGATGTAGAGGCGATTGCAGATAAGTTCAGGTCTTCAGATTCTCTAGAGGTGCATGTTGATGCAGCAGAAACCCTTTGTGCTATAACAAGGCTTGCTCCACCTGGACTTGCTACTAAAATCTGTAATCCGAGTTTTATACAAAGATTGCTTCAGCATGCTATGGAAGACTCTCAACGAAAATCTGTTCTCACTAGCTCATTATCGGTTTGCATCTCTTTGTTAGACCGTGAGAGGGAAGCTTTGAGAACAAATGCATGTACTGGTGAACACCAGCCTGCTCATGGATCTACAATTACTGTTAATAACAAGATTGTTGTGGCCATGCTCGACAGCCTAGGTGATTTGCTGAAACTTTTAGATGTTTCATCGGCGGACAATATGTTGTTAACTACATATGGCAAGTTACAGCCACCACTTGGAAAACATCGTTTGAAGATTGTAGAGTTCATTTCAGTATTACTGTCAGTTCGTAGTCAAGCTGCTGAGAAGGAATTGATTCGTATTGCAGCAATACAAAAAGTCTTAGACTTGTTTTTTAAGTACCCATATAACAATTTTTTGCATCACCACATAGAGAACATAATCGTATCATGTTTGGAAAGCAAAAATGGGCCTCTTGTACAACATCTTCTTTGTGAATGTGATCTTGTTGGAAAAATACTTGAAGCAGAAAAGAATTTCACACTGGCCGCTGATTCATTTATGCCAACAATTCCTGCTAAGGGTAGATCCCCACCCAGGAACGGCAATATTGGACATTTGACATGTATATCCAACAAAATCATTCAACTGGGAAACAACAATAGGGAGATTCAGGCATATCTGCAGGAAAACAGTGTCTGGACTGAATGGCATACAGAAGTCCTATTAAAGCGTAATGCAGTGGAGAATGTCTCCCAGTGGGCGTGCGGGCGGCCTATATCATCTCTGGATCGTGGACGCTCAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L29

Protein Analysis

626

Amino Acids

70.46

Weight (kDa)

6.73

Isoelectric Point (pI)

43.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_KRR1_1st	PF17903	84 - 162	6.7e-19	Krr1 KH1 domain
KH_KRR1_2nd	PF21800	186 - 261	2.6e-17	KRR1 small subunit processome component, second KH domain
SAPS	PF04499	308 - 608	2.7e-47	SIT4 phosphatase-associated protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002234)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39390 AT3G09500 AT3G55170 AT3G55170 AT3G55170 AT3G55170 AT3G55170 AT5G02610 AT5G02610
fragaria_vesca	FvH4_3g34730 FvH4_7g20960
malus_domestica	MD01G1119600.v1.1 MD03G1102300.v1.1 MD07G1188600.v1.1 MD11G1116100.v1.1
prunus_persica	Prupe.2G139200_v2.0.a1 Prupe.2G226300_v2.0.a1 Prupe.2G226300_v2.0.a1 Prupe.6G086600_v2.0.a1
pyrus_communis	pycom01g14620 pycom07g17870
rosa_chinensis	RchiOBHm_Chr1g0365321 RchiOBHm_Chr2g0098001 RchiOBHm_Chr5g0062471
rosa_laevigata	RLG00000027430 RLG00000035559
rosa_multiflora	Rmu_sc0004695.1_g000009 Rmu_sc0005277.1_g000021 Rmu_sc0010918.1_g000006
rosa_roxburghii	Rroxscaffold_1G00018140 Rroxscaffold_4G00279280 Rroxscaffold_4G00291310
rosa_rugosa	Rorug01G0321100 Rorug05G0349600
rosa_samantha	Rh1AG330000 Rh1BG291400 Rh1DG323100 Rh5BG423800 Rh5CG302300 Rh5CG447600 Rh5DG438300
rosa_wichuraiana	Rw1G029260 Rw5G038590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	346
AccB7I	CCANNNNNTGG	1 cut(s)	1346
AccI	GTMKAC	1 cut(s)	723
AciI	CCGC	5 cut(s)	459, 1301, 1620, 1839, 1843
AclI	AACGTT	1 cut(s)	586
AclWI	GGATC	4 cut(s)	560, 1222, 1653, 1869
AcoI	YGGCCR	3 cut(s)	123, 1248, 1617
AcsI	RAATTY	5 cut(s)	202, 352, 661, 686, 1606
AcuI	CTGAAG	2 cut(s)	948, 1064
AfaI	GTAC	3 cut(s)	1189, 1472, 1551
AfiI	CCNNNNNNNGG	8 cut(s)	22, 217, 1162, 1211, 1346, 1652, 1668, 1673
AflIII	ACRYGT	1 cut(s)	1694
AgsI	TTSAA	7 cut(s)	381, 416, 616, 692, 1363, 1595, 1718
AjnI	CCWGG	2 cut(s)	1030, 1667
AluBI	AGCT	7 cut(s)	157, 430, 808, 1125, 1169, 1409, 1878
AluI	AGCT	7 cut(s)	157, 430, 808, 1125, 1169, 1409, 1878
Alw21I	GWGCWC	1 cut(s)	792
Alw26I	GTCTC	1 cut(s)	1828
AlwI	GGATC	4 cut(s)	560, 1222, 1653, 1869
AlwNI	CAGNNNCTG	2 cut(s)	631, 1770
AoxI	GGCC	9 cut(s)	123, 208, 302, 420, 595, 1248, 1541, 1617, 1844
ApeKI	GCWGC	5 cut(s)	157, 639, 992, 1409, 1436
ApoI	RAATTY	5 cut(s)	202, 352, 661, 686, 1606
Asp700I	GAANNNNTTC	1 cut(s)	1425
AspA2I	CCTAGG	2 cut(s)	592, 1264
AspLEI	GCGC	1 cut(s)	347
AspS9I	GGNCC	6 cut(s)	31, 65, 209, 400, 596, 1541
AsuHPI	GGTGA	5 cut(s)	238, 322, 1205, 1280, 1487
AsuII	TTCGAA	1 cut(s)	733
AvaII	GGWCC	3 cut(s)	31, 65, 400
AvrII	CCTAGG	2 cut(s)	592, 1264
BalI	TGGCCA	2 cut(s)	125, 1250
BarI	GAAGNNNNNNTAC	2 cut(s)	1542, 1574
BbsI	GAAGAC	4 cut(s)	333, 623, 954, 1101
Bbv12I	GWGCWC	1 cut(s)	792
BbvI	GCAGC	5 cut(s)	144, 626, 1004, 1396, 1448
BccI	CCATC	3 cut(s)	45, 221, 697
BceAI	ACGGC	1 cut(s)	1690
BciT130I	CCWGG	2 cut(s)	1032, 1669
BclI	TGATCA	1 cut(s)	814
BcoDI	GTCTC	1 cut(s)	1828
BfaI	CTAG	7 cut(s)	396, 593, 750, 974, 1122, 1265, 1879
BfmI	CTRYAG	3 cut(s)	158, 640, 1754
BglII	AGATCT	1 cut(s)	830
BisI	GCNGC	7 cut(s)	158, 640, 993, 1410, 1437, 1620, 1844
BlnI	CCTAGG	2 cut(s)	592, 1264
BlpI	GCTNAGC	1 cut(s)	153
BlsI	GCNGC	7 cut(s)	159, 641, 994, 1411, 1438, 1621, 1845
Bme1390I	CCNGG	2 cut(s)	1032, 1669
Bme18I	GGWCC	3 cut(s)	31, 65, 400
BmgT120I	GGNCC	6 cut(s)	31, 65, 209, 400, 596, 1541
BmiI	GGNNCC	5 cut(s)	14, 367, 401, 402, 598
BmrFI	CCNGG	2 cut(s)	1032, 1669
BmrI	ACTGGG	2 cut(s)	1730, 1822
BmsI	GCATC	7 cut(s)	475, 637, 854, 922, 979, 1149, 1501
BmuI	ACTGGG	2 cut(s)	1730, 1822
BpiI	GAAGAC	4 cut(s)	333, 623, 954, 1101
BplI	GAGNNNNNCTC	2 cut(s)	1808, 1840
Bpu10I	CCTNAGC	1 cut(s)	1650
Bpu1102I	GCTNAGC	1 cut(s)	153
Bpu14I	TTCGAA	1 cut(s)	733
BpuEI	CTTGAG	1 cut(s)	1858
BsaBI	GATNNNNATC	1 cut(s)	829
BsaJI	CCNNGG	4 cut(s)	423, 592, 1264, 1667
Bsc4I	CCNNNNNNNGG	8 cut(s)	22, 217, 1162, 1211, 1346, 1652, 1668, 1673
Bse118I	RCCGGY	1 cut(s)	608
Bse1I	ACTGG	7 cut(s)	58, 242, 486, 1195, 1620, 1725, 1828
Bse8I	GATNNNNATC	1 cut(s)	829
BseBI	CCWGG	2 cut(s)	1032, 1669
BseDI	CCNNGG	4 cut(s)	423, 592, 1264, 1667
BseGI	GGATG	3 cut(s)	187, 490, 780
BseJI	GATNNNNATC	1 cut(s)	829
BseLI	CCNNNNNNNGG	8 cut(s)	22, 217, 1162, 1211, 1346, 1652, 1668, 1673
BseMII	CTCAG	2 cut(s)	144, 1404
BseNI	ACTGG	7 cut(s)	58, 242, 486, 1195, 1620, 1725, 1828
BseRI	GAGGAG	2 cut(s)	38, 41
BseXI	GCAGC	5 cut(s)	144, 626, 1004, 1396, 1448
BshFI	GGCC	9 cut(s)	125, 210, 304, 422, 597, 1250, 1543, 1619, 1846
BsiHKAI	GWGCWC	1 cut(s)	792
BsiSI	CCGG	1 cut(s)	609
BslFI	GGGAC	1 cut(s)	413
BslI	CCNNNNNNNGG	8 cut(s)	22, 217, 1162, 1211, 1346, 1652, 1668, 1673
BsmAI	GTCTC	1 cut(s)	1828
BsmFI	GGGAC	1 cut(s)	413
BsmI	GAATGC	1 cut(s)	729
BsnI	GGCC	9 cut(s)	125, 210, 304, 422, 597, 1250, 1543, 1619, 1846
Bsp119I	TTCGAA	1 cut(s)	733
Bsp1286I	GDGCHC	1 cut(s)	792
Bsp1407I	TGTACA	1 cut(s)	1549
Bsp143I	GATC	7 cut(s)	552, 814, 830, 1214, 1573, 1658, 1861
Bsp1720I	GCTNAGC	1 cut(s)	153
BspACI	CCGC	5 cut(s)	459, 1301, 1620, 1839, 1843
BspANI	GGCC	9 cut(s)	125, 210, 304, 422, 597, 1250, 1543, 1619, 1846
BspCNI	CTCAG	2 cut(s)	145, 1405
BspHI	TCATGA	2 cut(s)	855, 877
BspLI	GGNNCC	5 cut(s)	14, 367, 401, 402, 598
BspMAI	CTGCAG	3 cut(s)	162, 644, 1758
BspPI	GGATC	4 cut(s)	560, 1222, 1653, 1869
BspT104I	TTCGAA	1 cut(s)	733
BsrFI	RCCGGY	1 cut(s)	608
BsrGI	TGTACA	1 cut(s)	1549
BsrI	ACTGG	7 cut(s)	58, 242, 486, 1195, 1620, 1725, 1828
BssAI	RCCGGY	1 cut(s)	608
BssECI	CCNNGG	4 cut(s)	423, 592, 1264, 1667
BssMI	GATC	7 cut(s)	552, 814, 830, 1214, 1573, 1658, 1861
BssT1I	CCWWGG	3 cut(s)	423, 592, 1264
Bst2UI	CCWGG	2 cut(s)	1032, 1669
Bst4CI	ACNGT	9 cut(s)	97, 310, 376, 579, 670, 1157, 1228, 1392, 1766
BstAUI	TGTACA	1 cut(s)	1549
BstBI	TTCGAA	1 cut(s)	733
BstC8I	GCNNGC	5 cut(s)	1023, 1086, 1206, 1837, 1841
BstDEI	CTNAG	4 cut(s)	153, 1413, 1453, 1650
BstENI	CCTNNNNNAGG	1 cut(s)	20
BstF5I	GGATG	3 cut(s)	187, 490, 780
BstHHI	GCGC	1 cut(s)	347
BstKTI	GATC	7 cut(s)	555, 817, 833, 1217, 1576, 1661, 1864
BstMAI	GTCTC	1 cut(s)	1828
BstMBI	GATC	7 cut(s)	552, 814, 830, 1214, 1573, 1658, 1861
BstMWI	GCNNNNNNNGC	1 cut(s)	467
BstNI	CCWGG	2 cut(s)	1032, 1669
BstNSI	RCATGY	4 cut(s)	986, 1088, 1188, 1698
BstSCI	CCNGG	2 cut(s)	1030, 1667
BstSFI	CTRYAG	3 cut(s)	158, 640, 1754
BstV1I	GCAGC	5 cut(s)	144, 626, 1004, 1396, 1448
BstV2I	GAAGAC	4 cut(s)	333, 623, 954, 1101
BstX2I	RGATCY	3 cut(s)	830, 1214, 1658
BstYI	RGATCY	3 cut(s)	830, 1214, 1658
BsuRI	GGCC	9 cut(s)	125, 210, 304, 422, 597, 1250, 1543, 1619, 1846
BtsCI	GGATG	3 cut(s)	187, 490, 780
BtsI	GCAGTG	3 cut(s)	649, 908, 1818
BtsIMutI	CAGTG	9 cut(s)	102, 347, 649, 666, 908, 1613, 1771, 1818, 1835
Cac8I	GCNNGC	5 cut(s)	1023, 1086, 1206, 1837, 1841
CaiI	CAGNNNCTG	2 cut(s)	631, 1770
CciI	TCATGA	2 cut(s)	855, 877
CfoI	GCGC	1 cut(s)	347
Cfr10I	RCCGGY	1 cut(s)	608
Cfr13I	GGNCC	6 cut(s)	31, 65, 209, 400, 596, 1541
CseI	GACGC	2 cut(s)	85, 734
Csp6I	GTAC	3 cut(s)	1188, 1471, 1550
CspCI	CAANNNNNGTGG	2 cut(s)	882, 917
CviQI	GTAC	3 cut(s)	1188, 1471, 1550
DdeI	CTNAG	4 cut(s)	153, 1413, 1453, 1650
DpnI	GATC	7 cut(s)	554, 816, 832, 1216, 1575, 1660, 1863
DpnII	GATC	7 cut(s)	552, 814, 830, 1214, 1573, 1658, 1861
EaeI	YGGCCR	3 cut(s)	123, 1248, 1617
EciI	GGCGGA	1 cut(s)	1316
Eco130I	CCWWGG	3 cut(s)	423, 592, 1264
Eco47I	GGWCC	3 cut(s)	31, 65, 400
Eco57I	CTGAAG	2 cut(s)	948, 1064
EcoNI	CCTNNNNNAGG	1 cut(s)	20
EcoO109I	RGGNCCY	2 cut(s)	400, 596
EcoRII	CCWGG	2 cut(s)	1030, 1667
EcoT14I	CCWWGG	3 cut(s)	423, 592, 1264
EcoT22I	ATGCAT	1 cut(s)	1186
ErhI	CCWWGG	3 cut(s)	423, 592, 1264
FaqI	GGGAC	1 cut(s)	413
FauI	CCCGC	2 cut(s)	466, 1832
FauNDI	CATATG	1 cut(s)	1324
FbaI	TGATCA	1 cut(s)	814
FblI	GTMKAC	1 cut(s)	723
Fnu4HI	GCNGC	7 cut(s)	158, 640, 993, 1410, 1437, 1620, 1844
FokI	GGATG	3 cut(s)	194, 497, 787
Fsp4HI	GCNGC	7 cut(s)	158, 640, 993, 1410, 1437, 1620, 1844
FspAI	RTGCGCAY	1 cut(s)	346
FspBI	CTAG	7 cut(s)	396, 593, 750, 974, 1122, 1265, 1879
FspI	TGCGCA	1 cut(s)	346
GlaI	GCGC	1 cut(s)	346
GluI	GCNGC	7 cut(s)	158, 640, 993, 1410, 1437, 1620, 1844
HaeIII	GGCC	9 cut(s)	125, 210, 304, 422, 597, 1250, 1543, 1619, 1846
HapII	CCGG	1 cut(s)	609
HgaI	GACGC	2 cut(s)	85, 734
HhaI	GCGC	1 cut(s)	347
Hin6I	GCGC	1 cut(s)	345
HinP1I	GCGC	1 cut(s)	345
HincII	GTYRAC	1 cut(s)	1317
HindII	GTYRAC	1 cut(s)	1317
HindIII	AAGCTT	1 cut(s)	1167
HinfI	GANTC	7 cut(s)	778, 926, 968, 1097, 1426, 1625, 1741
HpaI	GTTAAC	1 cut(s)	1317
HpaII	CCGG	1 cut(s)	609
HphI	GGTGA	5 cut(s)	238, 322, 1205, 1280, 1487
Hpy166II	GTNNAC	5 cut(s)	575, 724, 1196, 1317, 1868
Hpy188I	TCNGA	7 cut(s)	633, 764, 774, 918, 931, 967, 1059
Hpy188III	TCNNGA	9 cut(s)	73, 85, 572, 709, 856, 878, 974, 1771, 1859
Hpy8I	GTNNAC	5 cut(s)	575, 724, 1196, 1317, 1868
Hpy99I	CGWCG	1 cut(s)	79
HpyAV	CCTTC	5 cut(s)	82, 222, 686, 759, 1411
HpyCH4III	ACNGT	9 cut(s)	97, 310, 376, 579, 670, 1157, 1228, 1392, 1766
HpyCH4IV	ACGT	1 cut(s)	586
HpyF10VI	GCNNNNNNNGC	1 cut(s)	467
HpyF3I	CTNAG	4 cut(s)	153, 1413, 1453, 1650
HpySE526I	ACGT	1 cut(s)	586
HspAI	GCGC	1 cut(s)	345
KflI	GGGWCCC	1 cut(s)	400
Ksp22I	TGATCA	1 cut(s)	814
KspAI	GTTAAC	1 cut(s)	1317
Kzo9I	GATC	7 cut(s)	552, 814, 830, 1214, 1573, 1658, 1861
LmnI	GCTCC	3 cut(s)	427, 562, 1030
Lsp1109I	GCAGC	5 cut(s)	144, 626, 1004, 1396, 1448
LweI	GCATC	7 cut(s)	475, 637, 854, 922, 979, 1149, 1501
MaeI	CTAG	7 cut(s)	396, 593, 750, 974, 1122, 1265, 1879
MaeII	ACGT	1 cut(s)	586
MaeIII	GTNAC	2 cut(s)	244, 1332
MalI	GATC	7 cut(s)	554, 816, 832, 1216, 1575, 1660, 1863
MboI	GATC	7 cut(s)	552, 814, 830, 1214, 1573, 1658, 1861
MflI	RGATCY	3 cut(s)	830, 1214, 1658
MhlI	GDGCHC	1 cut(s)	792
MlsI	TGGCCA	2 cut(s)	125, 1250
MluNI	TGGCCA	2 cut(s)	125, 1250
MlyI	GAGTC	1 cut(s)	1091
MmeI	TCCRAC	3 cut(s)	198, 1561, 1728
Mox20I	TGGCCA	2 cut(s)	125, 1250
Mph1103I	ATGCAT	1 cut(s)	1186
MroXI	GAANNNNTTC	1 cut(s)	1425
MscI	TGGCCA	2 cut(s)	125, 1250
MseI	TTAA	8 cut(s)	102, 170, 267, 698, 1230, 1316, 1467, 1799
MslI	CAYNNNNRTG	1 cut(s)	987
Msp20I	TGGCCA	2 cut(s)	125, 1250
MspA1I	CMGCKG	1 cut(s)	1622
MspI	CCGG	1 cut(s)	609
MspR9I	CCNGG	2 cut(s)	1032, 1669
Mva1269I	GAATGC	1 cut(s)	729
MvaI	CCWGG	2 cut(s)	1032, 1669
MwoI	GCNNNNNNNGC	1 cut(s)	467
NdeI	CATATG	1 cut(s)	1324
NdeII	GATC	7 cut(s)	552, 814, 830, 1214, 1573, 1658, 1861
NlaIV	GGNNCC	5 cut(s)	14, 367, 401, 402, 598
NmuCI	GTSAC	1 cut(s)	244
NsbI	TGCGCA	1 cut(s)	346
NsiI	ATGCAT	1 cut(s)	1186
NspI	RCATGY	4 cut(s)	986, 1088, 1188, 1698
NspV	TTCGAA	1 cut(s)	733
PaeI	GCATGC	1 cut(s)	1088
PagI	TCATGA	2 cut(s)	855, 877
PciI	ACATGT	1 cut(s)	1694
PcsI	WCGNNNNNNNCGW	1 cut(s)	583
PctI	GAATGC	1 cut(s)	729
PdmI	GAANNNNTTC	1 cut(s)	1425
PfeI	GAWTC	6 cut(s)	778, 926, 968, 1426, 1625, 1741
PflMI	CCANNNNNTGG	1 cut(s)	1346
PkrI	GCNGC	7 cut(s)	159, 641, 994, 1411, 1438, 1621, 1845
PleI	GAGTC	1 cut(s)	1091
PpsI	GAGTC	1 cut(s)	1091
PpuMI	RGGWCCY	1 cut(s)	400
PscI	ACATGT	1 cut(s)	1694
Psp1406I	AACGTT	1 cut(s)	586
Psp5II	RGGWCCY	1 cut(s)	400
Psp6I	CCWGG	2 cut(s)	1030, 1667
PspGI	CCWGG	2 cut(s)	1030, 1667
PspN4I	GGNNCC	5 cut(s)	14, 367, 401, 402, 598
PspPI	GGNCC	6 cut(s)	31, 65, 209, 400, 596, 1541
PspPPI	RGGWCCY	1 cut(s)	400
PstI	CTGCAG	3 cut(s)	162, 644, 1758
PstNI	CAGNNNCTG	2 cut(s)	631, 1770
PsuI	RGATCY	3 cut(s)	830, 1214, 1658
RsaI	GTAC	3 cut(s)	1189, 1472, 1551
RsaNI	GTAC	3 cut(s)	1188, 1471, 1550
RseI	CAYNNNNRTG	1 cut(s)	987
SaqAI	TTAA	8 cut(s)	102, 170, 267, 698, 1230, 1316, 1467, 1799
SatI	GCNGC	7 cut(s)	158, 640, 993, 1410, 1437, 1620, 1844
Sau3AI	GATC	7 cut(s)	552, 814, 830, 1214, 1573, 1658, 1861
Sau96I	GGNCC	6 cut(s)	31, 65, 209, 400, 596, 1541
SchI	GAGTC	1 cut(s)	1091
ScrFI	CCNGG	2 cut(s)	1032, 1669
SduI	GDGCHC	1 cut(s)	792
SfaNI	GCATC	7 cut(s)	475, 637, 854, 922, 979, 1149, 1501
SfcI	CTRYAG	3 cut(s)	158, 640, 1754
SfuI	TTCGAA	1 cut(s)	733
SinI	GGWCC	3 cut(s)	31, 65, 400
SmiMI	CAYNNNNRTG	1 cut(s)	987
SmlI	CTYRAG	1 cut(s)	1873
SmoI	CTYRAG	1 cut(s)	1873
SphI	GCATGC	1 cut(s)	1088
SsiI	CCGC	5 cut(s)	459, 1301, 1620, 1839, 1843
SspI	AATATT	1 cut(s)	1681
SspMI	CTAG	7 cut(s)	396, 593, 750, 974, 1122, 1265, 1879
StyD4I	CCNGG	2 cut(s)	1030, 1667
StyI	CCWWGG	3 cut(s)	423, 592, 1264
TaaI	ACNGT	9 cut(s)	97, 310, 376, 579, 670, 1157, 1228, 1392, 1766
TaiI	ACGT	1 cut(s)	589
TaqI	TCGA	5 cut(s)	54, 74, 555, 733, 1257
TatI	WGTACW	2 cut(s)	1187, 1549
TauI	GCSGC	2 cut(s)	1622, 1846
TfiI	GAWTC	6 cut(s)	778, 926, 968, 1426, 1625, 1741
Tru1I	TTAA	8 cut(s)	102, 170, 267, 698, 1230, 1316, 1467, 1799
Tru9I	TTAA	8 cut(s)	102, 170, 267, 698, 1230, 1316, 1467, 1799
TscAI	CASTG	9 cut(s)	102, 354, 649, 673, 915, 1620, 1771, 1818, 1835
TseFI	GTSAC	1 cut(s)	244
TseI	GCWGC	5 cut(s)	157, 639, 992, 1409, 1436
Tsp45I	GTSAC	1 cut(s)	244
TspRI	CASTG	9 cut(s)	102, 354, 649, 673, 915, 1620, 1771, 1818, 1835
Van91I	CCANNNNNTGG	1 cut(s)	1346
VpaK11BI	GGWCC	3 cut(s)	31, 65, 400
XagI	CCTNNNNNAGG	1 cut(s)	20
XapI	RAATTY	5 cut(s)	202, 352, 661, 686, 1606
XbaI	TCTAGA	1 cut(s)	973
XceI	RCATGY	4 cut(s)	986, 1088, 1188, 1698
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1208
XmaJI	CCTAGG	2 cut(s)	592, 1264
XmiI	GTMKAC	1 cut(s)	723
XmnI	GAANNNNTTC	1 cut(s)	1425
XspI	CTAG	7 cut(s)	396, 593, 750, 974, 1122, 1265, 1879
Zsp2I	ATGCAT	1 cut(s)	1186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.