Prupe.4G075800_v2.0.a1

purine permease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0017618
Physical Location & Seq
Forward (+)
3712259 .. 3713281
1023 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G075800.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 1023 bp
ATGGCCATCTATACATTCTTTGTCTTCTCTGGCCAATCAGCAGCTATACTCTTGGGACGACTGTACTATAACAAAGGTGGCAAAAACTTATGGATGGCAACCCTGGTGCAATTCATAGGGTTCCCAATCCTAATCCCTTACCACTGCATCTTATCATCCAAAAAGATTGCCCTCGACCGCAATGTGAACCAGCCAGATGCCTCGGCACTTGCATTCATGTATCTTTCTTTTGGTGTGTTACTAGCAGCAGACAGCTTTCTGTATTCTATAGGTCTATTGTACCTTCCAGTTTCTACCTTTTCGCTGATTTGTGCATCCCAGTTGGCCTTCAATGCTTTCTTCTCTTTCTGCCTTAATGCACAGAAGTTCACCCCTTGTATAGTCAACTCTTTAGTCATTCTCACCATCTCCTCCACCTTGCTTGTGTTTCACCCCAACTCGGTAAACCTCACTGGAATCTCCAAAGAGAAGTATACAGTCGGAGTCATTTGCACGGTTGGTGCATCTGCTGGGTACGGTTTGATGTTTTCCCTCACACAGTTCTCCTTCGAAAAGGTTCTAAAATCGCAAACATTTGTAACAGTCTTAGAAATGATAATCTATGAGTCGCTCGTAGCAACCTGTGCTACCCTAGTGGGACTTTTCATCAGTGAAGAATGGCAGGGTTTAAAGAGAGAGATGGAGGAGTTTGAGCTGGGGAGGTCATCCTATTTTCTGACTTTGATTTGTACCGCAACGGCATGGCAAACCTTCAACATTGGCGCAATAGGACTGATTTTTGAGGTGTCTTCCTTATTCTCCAATGTTATAAGTGCTTCTGGCTTGCCCCTTGTTCCAGTTCTAGCTGTAATCTTCTTCAAGGAAAATATGGACGGAATAAAGGTGATTGCCACGGTATTGGCTCTCTGGGGCTTCGCTTCATATCTCTATCAGCACTATCTCGATGATTTAGAGTCCAAGGCTGAAATTAAACATGTAAAAGAAATTTCAATGATTCCTTTACTGAAAGAGGACAACTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PUNUT

Protein Analysis

341

Amino Acids

37.64

Weight (kDa)

5.84

Isoelectric Point (pI)

31.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017618)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g06160
malus_domestica MD05G1289900.v1.1
prunus_persica Prupe.4G075800_v2.0.a1
rosa_laevigata RLG00000031994
rosa_multiflora Rmu_sc0004521.1_g000005
rosa_roxburghii Rroxscaffold_1G00063410
rosa_rugosa Rorug05G0007800
rosa_samantha Rh5AG102100 Rh5BG098400 Rh5CG110600 Rh5DG097700
rosa_wichuraiana Rw5G008910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 809
AccI GTMKAC 1 cut(s) 473
AciI CCGC 2 cut(s) 178, 732
AcoI YGGCCR 2 cut(s) 3, 31
AcsI RAATTY 1 cut(s) 984
AfaI GTAC 4 cut(s) 65, 281, 515, 730
AfiI CCNNNNNNNGG 1 cut(s) 439
AflIII ACRYGT 1 cut(s) 973
AgsI TTSAA 4 cut(s) 331, 754, 859, 990
AjnI CCWGG 1 cut(s) 102
AluBI AGCT 4 cut(s) 44, 255, 694, 845
AluI AGCT 4 cut(s) 44, 255, 694, 845
AoxI GGCC 3 cut(s) 3, 31, 324
ApeKI GCWGC 2 cut(s) 41, 245
ApoI RAATTY 1 cut(s) 984
Asp700I GAANNNNTTC 1 cut(s) 555
AspLEI GCGC 1 cut(s) 764
AsuHPI GGTGA 4 cut(s) 361, 394, 422, 895
AsuII TTCGAA 1 cut(s) 549
BalI TGGCCA 2 cut(s) 5, 33
BbsI GAAGAC 2 cut(s) 16, 780
BbvI GCAGC 2 cut(s) 53, 257
BccI CCATC 4 cut(s) 14, 88, 413, 673
BceAI ACGGC 1 cut(s) 753
BciT130I CCWGG 1 cut(s) 104
BfaI CTAG 3 cut(s) 242, 632, 842
BfmI CTRYAG 1 cut(s) 267
BisI GCNGC 2 cut(s) 42, 246
BlsI GCNGC 2 cut(s) 43, 247
Bme1390I CCNGG 1 cut(s) 104
BmiI GGNNCC 1 cut(s) 122
BmrFI CCNGG 1 cut(s) 104
BmrI ACTGGG 1 cut(s) 313
BmsI GCATC 4 cut(s) 156, 187, 323, 512
BmuI ACTGGG 1 cut(s) 313
BpiI GAAGAC 2 cut(s) 16, 780
Bpu14I TTCGAA 1 cut(s) 549
BsaJI CCNNGG 4 cut(s) 102, 201, 891, 957
Bsc4I CCNNNNNNNGG 1 cut(s) 439
Bse1I ACTGG 4 cut(s) 287, 319, 457, 836
Bse3DI GCAATG 1 cut(s) 187
BseBI CCWGG 1 cut(s) 104
BseDI CCNNGG 4 cut(s) 102, 201, 891, 957
BseGI GGATG 4 cut(s) 99, 155, 314, 704
BseLI CCNNNNNNNGG 1 cut(s) 439
BseMI GCAATG 1 cut(s) 187
BseNI ACTGG 4 cut(s) 287, 319, 457, 836
BseRI GAGGAG 2 cut(s) 400, 698
BseXI GCAGC 2 cut(s) 53, 257
BseYI CCCAGC 2 cut(s) 509, 694
Bsh1285I CGRYCG 1 cut(s) 178
BshFI GGCC 3 cut(s) 5, 33, 326
BsiEI CGRYCG 1 cut(s) 178
BslFI GGGAC 2 cut(s) 69, 651
BslI CCNNNNNNNGG 1 cut(s) 439
BsmFI GGGAC 2 cut(s) 69, 651
BsmI GAATGC 1 cut(s) 212
BsnI GGCC 3 cut(s) 5, 33, 326
Bsp119I TTCGAA 1 cut(s) 549
BspACI CCGC 2 cut(s) 178, 732
BspANI GGCC 3 cut(s) 5, 33, 326
BspLI GGNNCC 1 cut(s) 122
BspT104I TTCGAA 1 cut(s) 549
BsrDI GCAATG 1 cut(s) 187
BsrI ACTGG 4 cut(s) 287, 319, 457, 836
BssECI CCNNGG 4 cut(s) 102, 201, 891, 957
BssNAI GTATAC 1 cut(s) 474
BssT1I CCWWGG 1 cut(s) 957
Bst1107I GTATAC 1 cut(s) 474
Bst2UI CCWGG 1 cut(s) 104
Bst4CI ACNGT 7 cut(s) 63, 478, 496, 518, 540, 583, 895
BstAPI GCANNNNNTGC 1 cut(s) 623
BstBI TTCGAA 1 cut(s) 549
BstC8I GCNNGC 1 cut(s) 824
BstDEI CTNAG 1 cut(s) 586
BstDSI CCRYGG 1 cut(s) 891
BstF5I GGATG 4 cut(s) 99, 155, 314, 704
BstHHI GCGC 1 cut(s) 764
BstMCI CGRYCG 1 cut(s) 178
BstMWI GCNNNNNNNGC 2 cut(s) 332, 623
BstNI CCWGG 1 cut(s) 104
BstNSI RCATGY 1 cut(s) 977
BstSCI CCNGG 1 cut(s) 102
BstSFI CTRYAG 1 cut(s) 267
BstV1I GCAGC 2 cut(s) 53, 257
BstV2I GAAGAC 2 cut(s) 16, 780
BstXI CCANNNNNNTGG 1 cut(s) 898
BstZ17I GTATAC 1 cut(s) 474
BsuRI GGCC 3 cut(s) 5, 33, 326
BtgI CCRYGG 1 cut(s) 891
BtsCI GGATG 4 cut(s) 99, 155, 314, 704
BtsI GCAGTG 1 cut(s) 142
BtsIMutI CAGTG 3 cut(s) 142, 450, 655
Cac8I GCNNGC 1 cut(s) 824
CfoI GCGC 1 cut(s) 764
Csp6I GTAC 4 cut(s) 64, 280, 514, 729
CspCI CAANNNNNGTGG 2 cut(s) 403, 438
CviAII CATG 3 cut(s) 217, 741, 974
CviQI GTAC 4 cut(s) 64, 280, 514, 729
DdeI CTNAG 1 cut(s) 586
DraI TTTAAA 1 cut(s) 669
EaeI YGGCCR 2 cut(s) 3, 31
Eco130I CCWWGG 1 cut(s) 957
EcoRII CCWGG 1 cut(s) 102
EcoT14I CCWWGG 1 cut(s) 957
ErhI CCWWGG 1 cut(s) 957
FaeI CATG 3 cut(s) 220, 744, 977
FaqI GGGAC 2 cut(s) 69, 651
FatI CATG 3 cut(s) 216, 740, 973
FblI GTMKAC 1 cut(s) 473
Fnu4HI GCNGC 2 cut(s) 42, 246
FokI GGATG 4 cut(s) 106, 142, 301, 691
Fsp4HI GCNGC 2 cut(s) 42, 246
FspBI CTAG 3 cut(s) 242, 632, 842
GlaI GCGC 1 cut(s) 763
GluI GCNGC 2 cut(s) 42, 246
GsaI CCCAGC 2 cut(s) 513, 698
HaeIII GGCC 3 cut(s) 5, 33, 326
HhaI GCGC 1 cut(s) 764
Hin1II CATG 3 cut(s) 220, 744, 977
Hin6I GCGC 1 cut(s) 762
HinP1I GCGC 1 cut(s) 762
HincII GTYRAC 1 cut(s) 385
HindII GTYRAC 1 cut(s) 385
HinfI GANTC 5 cut(s) 456, 483, 605, 953, 994
HphI GGTGA 4 cut(s) 361, 394, 422, 895
Hpy166II GTNNAC 5 cut(s) 187, 369, 385, 445, 474
Hpy188I TCNGA 2 cut(s) 482, 717
Hpy188III TCNNGA 1 cut(s) 941
Hpy8I GTNNAC 5 cut(s) 187, 369, 385, 445, 474
HpyAV CCTTC 4 cut(s) 293, 337, 556, 760
HpyCH4III ACNGT 7 cut(s) 63, 478, 496, 518, 540, 583, 895
HpyCH4V TGCA 7 cut(s) 109, 147, 212, 314, 359, 492, 503
HpyF10VI GCNNNNNNNGC 2 cut(s) 332, 623
HpyF3I CTNAG 1 cut(s) 586
Hsp92II CATG 3 cut(s) 220, 744, 977
HspAI GCGC 1 cut(s) 762
Lsp1109I GCAGC 2 cut(s) 53, 257
LweI GCATC 4 cut(s) 156, 187, 323, 512
MaeI CTAG 3 cut(s) 242, 632, 842
MaeIII GTNAC 2 cut(s) 237, 577
MboII GAAGA 6 cut(s) 16, 331, 665, 780, 844, 847
MlsI TGGCCA 2 cut(s) 5, 33
MluCI AATT 3 cut(s) 110, 966, 984
MluNI TGGCCA 2 cut(s) 5, 33
MlyI GAGTC 3 cut(s) 492, 614, 962
MmeI TCCRAC 1 cut(s) 460
MnlI CCTC 9 cut(s) 182, 211, 421, 458, 542, 676, 693, 775, 1003
Mox20I TGGCCA 2 cut(s) 5, 33
MroXI GAANNNNTTC 1 cut(s) 555
MscI TGGCCA 2 cut(s) 5, 33
MseI TTAA 3 cut(s) 354, 668, 969
Msp20I TGGCCA 2 cut(s) 5, 33
MspR9I CCNGG 1 cut(s) 104
Mva1269I GAATGC 1 cut(s) 212
MvaI CCWGG 1 cut(s) 104
MwoI GCNNNNNNNGC 2 cut(s) 332, 623
NlaIII CATG 3 cut(s) 220, 744, 977
NlaIV GGNNCC 1 cut(s) 122
NmeAIII GCCGAG 1 cut(s) 182
NspI RCATGY 1 cut(s) 977
NspV TTCGAA 1 cut(s) 549
PciI ACATGT 1 cut(s) 973
PctI GAATGC 1 cut(s) 212
PdmI GAANNNNTTC 1 cut(s) 555
PfeI GAWTC 2 cut(s) 456, 994
PkrI GCNGC 2 cut(s) 43, 247
PleI GAGTC 3 cut(s) 491, 613, 961
PpsI GAGTC 3 cut(s) 491, 613, 961
PscI ACATGT 1 cut(s) 973
PsiI TTATAA 1 cut(s) 809
Psp6I CCWGG 1 cut(s) 102
PspFI CCCAGC 2 cut(s) 509, 694
PspGI CCWGG 1 cut(s) 102
PspN4I GGNNCC 1 cut(s) 122
RsaI GTAC 4 cut(s) 65, 281, 515, 730
RsaNI GTAC 4 cut(s) 64, 280, 514, 729
SaqAI TTAA 3 cut(s) 354, 668, 969
SatI GCNGC 2 cut(s) 42, 246
SchI GAGTC 3 cut(s) 492, 614, 962
ScrFI CCNGG 1 cut(s) 104
SfaNI GCATC 4 cut(s) 156, 187, 323, 512
SfcI CTRYAG 1 cut(s) 267
SfuI TTCGAA 1 cut(s) 549
Sse9I AATT 3 cut(s) 110, 966, 984
SsiI CCGC 2 cut(s) 178, 732
SspMI CTAG 3 cut(s) 242, 632, 842
StyD4I CCNGG 1 cut(s) 102
StyI CCWWGG 1 cut(s) 957
TaaI ACNGT 7 cut(s) 63, 478, 496, 518, 540, 583, 895
TaqI TCGA 3 cut(s) 174, 549, 942
TasI AATT 3 cut(s) 110, 966, 984
TatI WGTACW 1 cut(s) 63
TfiI GAWTC 2 cut(s) 456, 994
Tru1I TTAA 3 cut(s) 354, 668, 969
Tru9I TTAA 3 cut(s) 354, 668, 969
TscAI CASTG 3 cut(s) 149, 457, 655
TseI GCWGC 2 cut(s) 41, 245
TspDTI ATGAA 4 cut(s) 103, 205, 634, 909
TspGWI ACGGA 1 cut(s) 888
TspRI CASTG 3 cut(s) 149, 457, 655
XapI RAATTY 1 cut(s) 984
XceI RCATGY 1 cut(s) 977
XmiI GTMKAC 1 cut(s) 473
XmnI GAANNNNTTC 1 cut(s) 555
XspI CTAG 3 cut(s) 242, 632, 842
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.