Prupe.4G222100_v2.0.a1

Belongs to the glycosyl hydrolase 17 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0012393
Physical Location & Seq
Forward (+)
13943539 .. 13946160
2622 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G222100.1

Sequence Viewer

Length: 1419 bp
ATGAGCATGGCCACCTTCACGTTCCCGTTCTTTCTCTCACTCCTCCTCCTCCCGCTCTCCTCACTCTTGACTTTTGCAGCTGAAAACACAACAGGTACAATTGGAATCAACTACGGCCGAATAGCCAACAATTTACCGCCACCGGAAAAAGTAGTGGCGCTCCTCAAGTCCCAAGGCATCAACAAAGTCAAGCTCTATGACACTGACGCTGCCGTCCTCACCGCCCTTGCCAACTCCGGCATAAACGTCGTCGTCGCTCTCCCCAACGAGCTCCTCTCCTCCGCCGCCAACGACCCCTCCTTCGCCGACAAATGGGTCCAAGCCAACATCTCCCAATACCACCCGCAGACCCAAATCGAAGCCATCGCCGTCGGCAACGAAGTCTTCGCCGACCCAAACAACACCACCAAATTCCTCGTCCCCGCCATTAACAACCTCCAATCTGCTCTCGTCAAGCACAATCTAAGCTCCTCAATCAAGCTCTCTTCCCCAATTGCCCTCAGCGCGCTCCAGAATTCGTACCCGTCTTCTTCCGGATCCTTCAAACCGGATCTAATCGAACCCGCGGTTAAACCTTTGCTGGACTTTTTAAGCAAAACGTCGTCGTATTTGATGATAAATGCGTACCCCTTTTTCGCGTACGAGGCCAACGCTGACGAGATCTCTCTAGACTACGCCTTGTTTCGGACCAACCCGGGTAACGTGGATTCGGGTAACGGGTTGCGTTATAATAGTTTGATGGAGGCCCAACTCGACGCCGTTTTCGCTGCCATGTCAGCTCTCGGATACGATGACGTTAAGTTGGTGGTGACGGAGACCGGGTGGCCTTCCAATGGCGACGAGAACGAGATTGGCTCGGGGAAAGCTAACGCCGCGGCGTATAACGGAAACTTGGTGAAAAGAGTTTTGACAGGGGGTGGGACCCCCTTGAAGCCCAAGGACCCACTCAACGTGTATTTATTTGCTCTGTTTAATGAGAACCAGAAGCCCGGGCCCACATCAGAGAGGAATTACGGGCTGTTTTATCCGGATGAAGGGAAAGTGTACGACATACCCCTTACTCTCGCGGGCCTGAATGGGGCCCAGTCAAATCCGGTAAACGAGAGCAAGGCCCAGGTTCCAACTACGGCGCCGTCTAGTGGGAACACGTGGTGCGTGGCGAATGTGAATGCAGGGGAGGAGAAGCTTCAGGCTGGACTGGATTACGCATGCGGAGAGGGCGGGGCTGATTGCCGTTCAATTCAGGAAGGCTCCACGTGTTTCAATCCAAATACGCTTGAGGCACACGCTTCGTACGCCTTTAATAGTTACTATCAGAAGAAGGCACGTGGAACTGGTACGTGCGATTTTGGTGGCGCCGCGCACGTTGTTGCTCAACCTCCAAGGTATGGGACGTGCGAGTACCCAACAGGTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_hydro_17 X8

Protein Analysis

473

Amino Acids

50.29

Weight (kDa)

4.9

Isoelectric Point (pI)

32.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012393)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G26830 AT4G26830 AT5G55180 AT5G55180
fragaria_vesca FvH4_3g23410 FvH4_3g23410
malus_domestica MD03G1194600.v1.1 MD11G1210800.v1.1
prunus_persica Prupe.4G222100_v2.0.a1
pyrus_communis pycom03g14670 pycom11g18630
rosa_chinensis RchiOBHm_Chr5g0041211
rosa_laevigata RLG00000034037
rosa_multiflora Rmu_sc0003502.1_g000013
rosa_roxburghii Rroxscaffold_1G00039410
rosa_rugosa Rorug05G0190600
rosa_samantha Rh5BG281600 Rh5CG313600
rosa_wichuraiana Rw5G026020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 729
AasI GACNNNNNNGTC 2 cut(s) 212, 314
AccB1I GGYRCC 2 cut(s) 1129, 1355
AccB7I CCANNNNNTGG 1 cut(s) 1388
AccBSI CCGCTC 1 cut(s) 55
AccII CGCG 6 cut(s) 506, 566, 638, 875, 1067, 1361
AccIII TCCGGA 2 cut(s) 533, 1027
AclWI GGATC 3 cut(s) 531, 544, 558
AcoI YGGCCR 2 cut(s) 9, 115
AcsI RAATTY 2 cut(s) 410, 514
AcuI CTGAAG 1 cut(s) 1172
AcvI CACGTG 3 cut(s) 1149, 1257, 1328
AcyI GRCGYC 3 cut(s) 756, 1130, 1356
AdeI CACNNNGTG 1 cut(s) 1152
AfaI GTAC 8 cut(s) 97, 521, 626, 641, 1046, 1295, 1339, 1403
AfiI CCNNNNNNNGG 7 cut(s) 312, 684, 833, 1034, 1078, 1139, 1388
AflIII ACRYGT 3 cut(s) 951, 1146, 1256
AgsI TTSAA 4 cut(s) 544, 931, 1239, 1264
AjiI CACGTC 1 cut(s) 1395
AjnI CCWGG 1 cut(s) 1113
AluBI AGCT 8 cut(s) 80, 193, 271, 468, 481, 779, 866, 1186
AluI AGCT 8 cut(s) 80, 193, 271, 468, 481, 779, 866, 1186
Alw21I GWGCWC 1 cut(s) 273
Alw26I GTCTC 1 cut(s) 809
AlwI GGATC 3 cut(s) 531, 544, 558
Ama87I CYCGRG 3 cut(s) 694, 856, 989
Aor13HI TCCGGA 2 cut(s) 533, 1027
AoxI GGCC 9 cut(s) 9, 115, 645, 744, 824, 992, 1069, 1080, 1110
ApaI GGGCCC 2 cut(s) 996, 1084
ApeKI GCWGC 3 cut(s) 77, 209, 767
ApoI RAATTY 2 cut(s) 410, 514
ArsI GACNNNNNNTTYG 6 cut(s) 284, 316, 402, 434, 746, 778
AspLEI GCGC 6 cut(s) 160, 506, 508, 1132, 1358, 1363
AsuC2I CCSGG 5 cut(s) 695, 696, 820, 990, 991
AsuHPI GGTGA 3 cut(s) 211, 820, 907
AvaI CYCGRG 3 cut(s) 694, 856, 989
AvaII GGWCC 4 cut(s) 316, 687, 921, 940
BaeGI GKGCMC 2 cut(s) 996, 1084
BalI TGGCCA 1 cut(s) 11
BamHI GGATCC 1 cut(s) 536
BanI GGYRCC 2 cut(s) 1129, 1355
BanII GRGCYC 3 cut(s) 273, 996, 1084
BbrPI CACGTG 3 cut(s) 1149, 1257, 1328
BbsI GAAGAC 2 cut(s) 376, 519
Bbv12I GWGCWC 1 cut(s) 273
BbvCI CCTCAGC 1 cut(s) 500
BbvI GCAGC 3 cut(s) 89, 196, 754
BccI CCATC 2 cut(s) 371, 733
BceAI ACGGC 7 cut(s) 130, 197, 353, 743, 1117, 1143, 1218
BcgI CGANNNNNNTGC 4 cut(s) 229, 263, 1272, 1306
BciT130I CCWGG 1 cut(s) 1115
BciVI GTATCC 1 cut(s) 779
BcnI CCSGG 5 cut(s) 695, 696, 820, 990, 991
BcoDI GTCTC 1 cut(s) 809
BfaI CTAG 2 cut(s) 668, 1137
BfoI RGCGCY 3 cut(s) 161, 1133, 1359
BfuI GTATCC 1 cut(s) 779
BglII AGATCT 1 cut(s) 660
BisI GCNGC 7 cut(s) 78, 210, 285, 768, 873, 876, 1359
BlsI GCNGC 7 cut(s) 79, 211, 286, 769, 874, 877, 1360
Bme1390I CCNGG 6 cut(s) 695, 696, 820, 990, 991, 1115
Bme18I GGWCC 4 cut(s) 316, 687, 921, 940
BmeT110I CYCGRG 3 cut(s) 694, 856, 989
BmgBI CACGTC 1 cut(s) 1395
BmrFI CCNGG 6 cut(s) 695, 696, 820, 990, 991, 1115
BmrI ACTGGG 1 cut(s) 1078
BmsI GCATC 1 cut(s) 186
BmuI ACTGGG 1 cut(s) 1078
BpiI GAAGAC 2 cut(s) 376, 519
BplI GAGNNNNNCTC 4 cut(s) 260, 292, 839, 871
BpmI CTGGAG 1 cut(s) 494
Bpu10I CCTNAGC 1 cut(s) 500
BpuEI CTTGAG 2 cut(s) 149, 1298
BpuMI CCSGG 5 cut(s) 695, 696, 820, 990, 991
BsaAI YACGTR 4 cut(s) 1149, 1257, 1328, 1341
BsaHI GRCGYC 3 cut(s) 756, 1130, 1356
BsaI GGTCTC 1 cut(s) 809
BsaJI CCNNGG 8 cut(s) 172, 564, 694, 873, 936, 989, 1113, 1382
BsaWI WCCGGW 5 cut(s) 142, 533, 547, 1027, 1093
BsaXI ACNNNNNCTCC 6 cut(s) 30, 60, 281, 311, 806, 836
Bsc4I CCNNNNNNNGG 7 cut(s) 312, 684, 833, 1034, 1078, 1139, 1388
Bse1I ACTGG 3 cut(s) 1084, 1203, 1339
BseAI TCCGGA 2 cut(s) 533, 1027
BseBI CCWGG 1 cut(s) 1115
BseDI CCNNGG 8 cut(s) 172, 564, 694, 873, 936, 989, 1113, 1382
BseGI GGATG 1 cut(s) 1036
BseLI CCNNNNNNNGG 7 cut(s) 312, 684, 833, 1034, 1078, 1139, 1388
BseMII CTCAG 1 cut(s) 514
BseNI ACTGG 3 cut(s) 1084, 1203, 1339
BsePI GCGCGC 1 cut(s) 504
BseRI GAGGAG 9 cut(s) 32, 35, 38, 49, 152, 263, 268, 460, 1193
BseSI GKGCMC 2 cut(s) 996, 1084
BseX3I CGGCCG 1 cut(s) 115
BseXI GCAGC 3 cut(s) 89, 196, 754
Bsh1236I CGCG 6 cut(s) 506, 566, 638, 875, 1067, 1361
Bsh1285I CGRYCG 1 cut(s) 118
BshFI GGCC 9 cut(s) 11, 117, 647, 746, 826, 994, 1071, 1082, 1112
BshNI GGYRCC 2 cut(s) 1129, 1355
BsiEI CGRYCG 1 cut(s) 118
BsiHKAI GWGCWC 1 cut(s) 273
BsiHKCI CYCGRG 3 cut(s) 694, 856, 989
BsiSI CCGG 9 cut(s) 143, 237, 534, 548, 695, 819, 990, 1028, 1094
BsiWI CGTACG 2 cut(s) 639, 1293
BslFI GGGAC 4 cut(s) 154, 404, 934, 1405
BslI CCNNNNNNNGG 7 cut(s) 312, 684, 833, 1034, 1078, 1139, 1388
BsmAI GTCTC 1 cut(s) 809
BsmFI GGGAC 4 cut(s) 154, 404, 934, 1405
BsmI GAATGC 1 cut(s) 1174
BsnI GGCC 9 cut(s) 11, 117, 647, 746, 826, 994, 1071, 1082, 1112
Bso31I GGTCTC 1 cut(s) 809
BsoBI CYCGRG 3 cut(s) 694, 856, 989
Bsp120I GGGCCC 2 cut(s) 992, 1080
Bsp1286I GDGCHC 3 cut(s) 273, 996, 1084
Bsp13I TCCGGA 2 cut(s) 533, 1027
Bsp143I GATC 3 cut(s) 536, 550, 660
BspANI GGCC 9 cut(s) 11, 117, 647, 746, 826, 994, 1071, 1082, 1112
BspCNI CTCAG 1 cut(s) 513
BspEI TCCGGA 2 cut(s) 533, 1027
BspFNI CGCG 6 cut(s) 506, 566, 638, 875, 1067, 1361
BspPI GGATC 3 cut(s) 531, 544, 558
BspT107I GGYRCC 2 cut(s) 1129, 1355
BspTNI GGTCTC 1 cut(s) 809
BsrBI CCGCTC 1 cut(s) 55
BsrI ACTGG 3 cut(s) 1084, 1203, 1339
BssECI CCNNGG 8 cut(s) 172, 564, 694, 873, 936, 989, 1113, 1382
BssHII GCGCGC 1 cut(s) 504
BssMI GATC 3 cut(s) 536, 550, 660
BssNI GRCGYC 3 cut(s) 756, 1130, 1356
BssT1I CCWWGG 3 cut(s) 172, 936, 1382
Bst2UI CCWGG 1 cut(s) 1115
Bst6I CTCTTC 1 cut(s) 490
BstACI GRCGYC 3 cut(s) 756, 1130, 1356
BstBAI YACGTR 4 cut(s) 1149, 1257, 1328, 1341
BstC8I GCNNGC 3 cut(s) 506, 1069, 1210
BstDEI CTNAG 2 cut(s) 464, 500
BstDSI CCRYGG 2 cut(s) 564, 873
BstF5I GGATG 1 cut(s) 1036
BstFNI CGCG 6 cut(s) 506, 566, 638, 875, 1067, 1361
BstH2I RGCGCY 3 cut(s) 161, 1133, 1359
BstHHI GCGC 6 cut(s) 160, 506, 508, 1132, 1358, 1363
BstKTI GATC 3 cut(s) 539, 553, 663
BstMAI GTCTC 1 cut(s) 809
BstMBI GATC 3 cut(s) 536, 550, 660
BstMCI CGRYCG 1 cut(s) 118
BstMWI GCNNNNNNNGC 7 cut(s) 503, 644, 764, 776, 872, 1218, 1295
BstNI CCWGG 1 cut(s) 1115
BstNSI RCATGY 1 cut(s) 1212
BstSCI CCNGG 6 cut(s) 693, 694, 818, 988, 989, 1113
BstSLI GKGCMC 2 cut(s) 996, 1084
BstUI CGCG 6 cut(s) 506, 566, 638, 875, 1067, 1361
BstV1I GCAGC 3 cut(s) 89, 196, 754
BstV2I GAAGAC 2 cut(s) 376, 519
BstX2I RGATCY 3 cut(s) 536, 550, 660
BstYI RGATCY 3 cut(s) 536, 550, 660
BstZI CGGCCG 1 cut(s) 115
BsuI GTATCC 1 cut(s) 779
BsuRI GGCC 9 cut(s) 11, 117, 647, 746, 826, 994, 1071, 1082, 1112
BtgI CCRYGG 2 cut(s) 564, 873
BtgZI GCGATG 1 cut(s) 349
BtrI CACGTC 1 cut(s) 1395
BtsCI GGATG 1 cut(s) 1036
BtsIMutI CAGTG 1 cut(s) 201
Cac8I GCNNGC 3 cut(s) 506, 1069, 1210
CfoI GCGC 6 cut(s) 160, 506, 508, 1132, 1358, 1363
Cfr42I CCGCGG 2 cut(s) 567, 876
Cfr9I CCCGGG 2 cut(s) 694, 989
CseI GACGC 2 cut(s) 215, 764
Csp6I GTAC 8 cut(s) 96, 520, 625, 640, 1045, 1294, 1338, 1402
CviAII CATG 3 cut(s) 7, 772, 1209
CviQI GTAC 8 cut(s) 96, 520, 625, 640, 1045, 1294, 1338, 1402
DdeI CTNAG 2 cut(s) 464, 500
DinI GGCGCC 2 cut(s) 1131, 1357
DpnI GATC 3 cut(s) 538, 552, 662
DpnII GATC 3 cut(s) 536, 550, 660
DraIII CACNNNGTG 1 cut(s) 1152
DrdI GACNNNNNNGTC 2 cut(s) 212, 314
DseDI GACNNNNNNGTC 2 cut(s) 212, 314
EaeI YGGCCR 2 cut(s) 9, 115
EagI CGGCCG 1 cut(s) 115
Eam1104I CTCTTC 1 cut(s) 490
EarI CTCTTC 1 cut(s) 490
EciI GGCGGA 1 cut(s) 271
Ecl136II GAGCTC 1 cut(s) 271
EclXI CGGCCG 1 cut(s) 115
Eco130I CCWWGG 3 cut(s) 172, 936, 1382
Eco24I GRGCYC 3 cut(s) 273, 996, 1084
Eco31I GGTCTC 1 cut(s) 809
Eco47I GGWCC 4 cut(s) 316, 687, 921, 940
Eco52I CGGCCG 1 cut(s) 115
Eco53kI GAGCTC 1 cut(s) 271
Eco57I CTGAAG 1 cut(s) 1172
Eco72I CACGTG 3 cut(s) 1149, 1257, 1328
Eco88I CYCGRG 3 cut(s) 694, 856, 989
EcoICRI GAGCTC 1 cut(s) 271
EcoO109I RGGNCCY 3 cut(s) 921, 940, 1080
EcoRI GAATTC 1 cut(s) 514
EcoRII CCWGG 1 cut(s) 1113
EcoT14I CCWWGG 3 cut(s) 172, 936, 1382
EcoT38I GRGCYC 3 cut(s) 273, 996, 1084
EgeI GGCGCC 2 cut(s) 1131, 1357
EheI GGCGCC 2 cut(s) 1131, 1357
ErhI CCWWGG 3 cut(s) 172, 936, 1382
FaeI CATG 3 cut(s) 10, 775, 1212
FaiI YATR 9 cut(s) 8, 198, 242, 729, 773, 882, 1052, 1210, 1389
FaqI GGGAC 4 cut(s) 154, 404, 934, 1405
FatI CATG 3 cut(s) 6, 771, 1208
FauI CCCGC 6 cut(s) 60, 351, 430, 571, 1060, 1214
Fnu4HI GCNGC 7 cut(s) 78, 210, 285, 768, 873, 876, 1359
FokI GGATG 1 cut(s) 1043
FriOI GRGCYC 3 cut(s) 273, 996, 1084
Fsp4HI GCNGC 7 cut(s) 78, 210, 285, 768, 873, 876, 1359
FspBI CTAG 2 cut(s) 668, 1137
GlaI GCGC 6 cut(s) 159, 505, 507, 1131, 1357, 1362
GluI GCNGC 7 cut(s) 78, 210, 285, 768, 873, 876, 1359
GsuI CTGGAG 1 cut(s) 494
HaeII RGCGCY 3 cut(s) 161, 1133, 1359
HaeIII GGCC 9 cut(s) 11, 117, 647, 746, 826, 994, 1071, 1082, 1112
HapII CCGG 9 cut(s) 143, 237, 534, 548, 695, 819, 990, 1028, 1094
HgaI GACGC 2 cut(s) 215, 764
HhaI GCGC 6 cut(s) 160, 506, 508, 1132, 1358, 1363
Hin1I GRCGYC 3 cut(s) 756, 1130, 1356
Hin1II CATG 3 cut(s) 10, 775, 1212
Hin6I GCGC 6 cut(s) 158, 504, 506, 1130, 1356, 1361
HinP1I GCGC 6 cut(s) 158, 504, 506, 1130, 1356, 1361
HindIII AAGCTT 1 cut(s) 1184
HinfI GANTC 2 cut(s) 105, 707
HpaII CCGG 9 cut(s) 143, 237, 534, 548, 695, 819, 990, 1028, 1094
HphI GGTGA 3 cut(s) 211, 820, 907
Hpy166II GTNNAC 2 cut(s) 1045, 1099
Hpy188I TCNGA 4 cut(s) 687, 785, 1003, 1317
Hpy188III TCNNGA 6 cut(s) 67, 511, 534, 668, 1028, 1244
Hpy8I GTNNAC 2 cut(s) 1045, 1099
Hpy99I CGWCG 8 cut(s) 251, 254, 257, 374, 604, 607, 758, 842
HpyAV CCTTC 7 cut(s) 25, 310, 550, 837, 1028, 1241, 1315
HpyCH4V TGCA 2 cut(s) 77, 1172
HpyF10VI GCNNNNNNNGC 7 cut(s) 503, 644, 764, 776, 872, 1218, 1295
HpyF3I CTNAG 2 cut(s) 464, 500
Hsp92I GRCGYC 3 cut(s) 756, 1130, 1356
Hsp92II CATG 3 cut(s) 10, 775, 1212
HspAI GCGC 6 cut(s) 158, 504, 506, 1130, 1356, 1361
KasI GGCGCC 2 cut(s) 1129, 1355
KflI GGGWCCC 1 cut(s) 921
Kpn2I TCCGGA 2 cut(s) 533, 1027
KspI CCGCGG 2 cut(s) 567, 876
Kzo9I GATC 3 cut(s) 536, 550, 660
LmnI GCTCC 5 cut(s) 165, 276, 473, 513, 1256
Lsp1109I GCAGC 3 cut(s) 89, 196, 754
LweI GCATC 1 cut(s) 186
MaeI CTAG 2 cut(s) 668, 1137
MaeIII GTNAC 5 cut(s) 698, 713, 808, 1307, 1412
MalI GATC 3 cut(s) 538, 552, 662
MbiI CCGCTC 1 cut(s) 55
MboI GATC 3 cut(s) 536, 550, 660
MboII GAAGA 5 cut(s) 376, 477, 519, 522, 1330
MfeI CAATTG 2 cut(s) 99, 492
MflI RGATCY 3 cut(s) 536, 550, 660
MhlI GDGCHC 3 cut(s) 273, 996, 1084
MlsI TGGCCA 1 cut(s) 11
MluCI AATT 7 cut(s) 99, 130, 410, 492, 514, 1009, 1239
MluNI TGGCCA 1 cut(s) 11
Mly113I GGCGCC 2 cut(s) 1130, 1356
MmeI TCCRAC 1 cut(s) 1145
Mox20I TGGCCA 1 cut(s) 11
MroI TCCGGA 2 cut(s) 533, 1027
MscI TGGCCA 1 cut(s) 11
MseI TTAA 6 cut(s) 429, 570, 590, 798, 972, 1302
Msp20I TGGCCA 1 cut(s) 11
MspA1I CMGCKG 3 cut(s) 80, 566, 875
MspI CCGG 9 cut(s) 143, 237, 534, 548, 695, 819, 990, 1028, 1094
MspR9I CCNGG 6 cut(s) 695, 696, 820, 990, 991, 1115
MteI GCGCNGCGC 1 cut(s) 1359
MunI CAATTG 2 cut(s) 99, 492
Mva1269I GAATGC 1 cut(s) 1174
MvaI CCWGG 1 cut(s) 1115
MvnI CGCG 6 cut(s) 506, 566, 638, 875, 1067, 1361
MwoI GCNNNNNNNGC 7 cut(s) 503, 644, 764, 776, 872, 1218, 1295
NarI GGCGCC 2 cut(s) 1130, 1356
NciI CCSGG 5 cut(s) 695, 696, 820, 990, 991
NdeII GATC 3 cut(s) 536, 550, 660
NlaIII CATG 3 cut(s) 10, 775, 1212
NmuCI GTSAC 1 cut(s) 808
NspI RCATGY 1 cut(s) 1212
PaeI GCATGC 1 cut(s) 1212
PauI GCGCGC 1 cut(s) 504
PctI GAATGC 1 cut(s) 1174
PfeI GAWTC 2 cut(s) 105, 707
Pfl23II CGTACG 2 cut(s) 639, 1293
PflMI CCANNNNNTGG 1 cut(s) 1388
PkrI GCNGC 7 cut(s) 79, 211, 286, 769, 874, 877, 1360
PluTI GGCGCC 2 cut(s) 1133, 1359
PmaCI CACGTG 3 cut(s) 1149, 1257, 1328
PmlI CACGTG 3 cut(s) 1149, 1257, 1328
Ppu21I YACGTR 4 cut(s) 1149, 1257, 1328, 1341
PpuMI RGGWCCY 2 cut(s) 921, 940
PsiI TTATAA 1 cut(s) 729
Psp124BI GAGCTC 1 cut(s) 273
Psp5II RGGWCCY 2 cut(s) 921, 940
Psp6I CCWGG 1 cut(s) 1113
PspCI CACGTG 3 cut(s) 1149, 1257, 1328
PspGI CCWGG 1 cut(s) 1113
PspLI CGTACG 2 cut(s) 639, 1293
PspOMI GGGCCC 2 cut(s) 992, 1080
PspPPI RGGWCCY 2 cut(s) 921, 940
PsuI RGATCY 3 cut(s) 536, 550, 660
PteI GCGCGC 1 cut(s) 504
PvuII CAGCTG 1 cut(s) 80
RsaI GTAC 8 cut(s) 97, 521, 626, 641, 1046, 1295, 1339, 1403
RsaNI GTAC 8 cut(s) 96, 520, 625, 640, 1045, 1294, 1338, 1402
SacI GAGCTC 1 cut(s) 273
SacII CCGCGG 2 cut(s) 567, 876
SaqAI TTAA 6 cut(s) 429, 570, 590, 798, 972, 1302
SatI GCNGC 7 cut(s) 78, 210, 285, 768, 873, 876, 1359
Sau3AI GATC 3 cut(s) 536, 550, 660
ScrFI CCNGG 6 cut(s) 695, 696, 820, 990, 991, 1115
SduI GDGCHC 3 cut(s) 273, 996, 1084
SfaNI GCATC 1 cut(s) 186
SfoI GGCGCC 2 cut(s) 1131, 1357
Sfr303I CCGCGG 2 cut(s) 567, 876
SgrBI CCGCGG 2 cut(s) 567, 876
SinI GGWCC 4 cut(s) 316, 687, 921, 940
SmaI CCCGGG 2 cut(s) 696, 991
SmlI CTYRAG 2 cut(s) 164, 1277
SmoI CTYRAG 2 cut(s) 164, 1277
SphI GCATGC 1 cut(s) 1212
SrfI GCCCGGGC 1 cut(s) 991
Sse9I AATT 7 cut(s) 99, 130, 410, 492, 514, 1009, 1239
SspDI GGCGCC 2 cut(s) 1129, 1355
SspMI CTAG 2 cut(s) 668, 1137
SstI GAGCTC 1 cut(s) 273
StyD4I CCNGG 6 cut(s) 693, 694, 818, 988, 989, 1113
StyI CCWWGG 3 cut(s) 172, 936, 1382
TaqI TCGA 3 cut(s) 357, 558, 753
TasI AATT 7 cut(s) 99, 130, 410, 492, 514, 1009, 1239
TauI GCSGC 4 cut(s) 287, 875, 878, 1361
TfiI GAWTC 2 cut(s) 105, 707
Tru1I TTAA 6 cut(s) 429, 570, 590, 798, 972, 1302
Tru9I TTAA 6 cut(s) 429, 570, 590, 798, 972, 1302
TscAI CASTG 1 cut(s) 208
TseFI GTSAC 1 cut(s) 808
TseI GCWGC 3 cut(s) 77, 209, 767
Tsp45I GTSAC 1 cut(s) 808
TspDTI ATGAA 1 cut(s) 1047
TspGWI ACGGA 2 cut(s) 827, 900
TspMI CCCGGG 2 cut(s) 694, 989
TspRI CASTG 1 cut(s) 208
Van91I CCANNNNNTGG 1 cut(s) 1388
VpaK11BI GGWCC 4 cut(s) 316, 687, 921, 940
XapI RAATTY 2 cut(s) 410, 514
XbaI TCTAGA 1 cut(s) 667
XceI RCATGY 1 cut(s) 1212
XmaI CCCGGG 2 cut(s) 694, 989
XspI CTAG 2 cut(s) 668, 1137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.