Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0015243

Physical Location & Seq

Genomic Coordinates Forward (+)

14197151 .. 14198141

Gene Structure 991 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G161600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 312 bp

ATGGAGGAAAATACTTTCGAACCTGATCTTGTTCATGCCATTTTCAAGCTCGTCTGGTCCAGTAGAGCTCTCGAGCGTCAAATGATTGAAGGCACCGATGCTTTGGACTGCGAGGTAGGAGCTGGAACATCTAAGAAAAATCGCCCCACATCAGCTAATGGGAATGCCGTAAAACTGAGTTGTGAACTTCTCCGTAACTTTGTCATAGAGGCTGTGCAGCGCGCTGCTACAATTGCTGAAGCAGAGGGTGTGAGTAAGATTGAAGCAACTCACTTGGAGCGGGTTCTCCCACAATTGCTTTTGGATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000712 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0031297 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034645 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043240 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045005 GO:0045132 GO:0045143 GO:0046483 GO:0048285 GO:0051276 GO:0051304 GO:0051307 GO:0051321 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071821 GO:0071840 GO:0090304 GO:0097159 GO:0098813 GO:0140013 GO:1901360 GO:1901363 GO:1901576 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03460 map03460

Pfam Domains

Protein Families

CENP-X

Protein Analysis

104

Amino Acids

11.35

Weight (kDa)

4.98

Isoelectric Point (pI)

32.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78790 AT1G78790 AT1G78790 AT1G78790
fragaria_vesca	FvH4_5g06690
prunus_persica	Prupe.5G161600_v2.0.a1
pyrus_communis	pycom06g14440
rosa_chinensis	RchiOBHm_Chr7g0191941
rosa_laevigata	RLG00000004416
rosa_multiflora	Rmu_ssc0000421.1_g000017
rosa_rugosa	Rorug06G0511800
rosa_samantha	Rh7AG122100 Rh7BG123700 Rh7CG126300 Rh7DG125300
rosa_wichuraiana	Rw7G010390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	92
AccBSI	CCGCTC	1 cut(s)	280
AccII	CGCG	1 cut(s)	222
AciI	CCGC	1 cut(s)	280
AcuI	CTGAAG	1 cut(s)	258
AgsI	TTSAA	3 cut(s)	46, 89, 263
AluBI	AGCT	4 cut(s)	49, 68, 122, 155
AluI	AGCT	4 cut(s)	49, 68, 122, 155
Alw21I	GWGCWC	1 cut(s)	70
Ama87I	CYCGRG	1 cut(s)	71
ApeKI	GCWGC	2 cut(s)	217, 224
AspLEI	GCGC	2 cut(s)	222, 224
AspS9I	GGNCC	1 cut(s)	57
AsuII	TTCGAA	1 cut(s)	18
AvaI	CYCGRG	1 cut(s)	71
AvaII	GGWCC	1 cut(s)	57
BanI	GGYRCC	1 cut(s)	92
BanII	GRGCYC	1 cut(s)	70
Bbv12I	GWGCWC	1 cut(s)	70
BbvI	GCAGC	2 cut(s)	211, 229
BceAI	ACGGC	1 cut(s)	152
BisI	GCNGC	2 cut(s)	218, 225
BlsI	GCNGC	2 cut(s)	219, 226
Bme18I	GGWCC	1 cut(s)	57
BmeT110I	CYCGRG	1 cut(s)	71
BmgT120I	GGNCC	1 cut(s)	57
BmiI	GGNNCC	1 cut(s)	94
BmsI	GCATC	1 cut(s)	88
Bpu14I	TTCGAA	1 cut(s)	18
Bse1I	ACTGG	1 cut(s)	60
BseMII	CTCAG	1 cut(s)	167
BseNI	ACTGG	1 cut(s)	60
BsePI	GCGCGC	1 cut(s)	220
BseXI	GCAGC	2 cut(s)	211, 229
BsgI	GTGCAG	1 cut(s)	236
Bsh1236I	CGCG	1 cut(s)	222
BshNI	GGYRCC	1 cut(s)	92
BsiHKAI	GWGCWC	1 cut(s)	70
BsiHKCI	CYCGRG	1 cut(s)	71
BsmI	GAATGC	1 cut(s)	169
BsoBI	CYCGRG	1 cut(s)	71
Bsp119I	TTCGAA	1 cut(s)	18
Bsp1286I	GDGCHC	1 cut(s)	70
Bsp143I	GATC	1 cut(s)	25
BspACI	CCGC	1 cut(s)	280
BspCNI	CTCAG	1 cut(s)	168
BspFNI	CGCG	1 cut(s)	222
BspLI	GGNNCC	1 cut(s)	94
BspT104I	TTCGAA	1 cut(s)	18
BspT107I	GGYRCC	1 cut(s)	92
BsrBI	CCGCTC	1 cut(s)	280
BsrI	ACTGG	1 cut(s)	60
BssHII	GCGCGC	1 cut(s)	220
BssMI	GATC	1 cut(s)	25
BstBI	TTCGAA	1 cut(s)	18
BstC8I	GCNNGC	1 cut(s)	222
BstDEI	CTNAG	2 cut(s)	132, 176
BstFNI	CGCG	1 cut(s)	222
BstHHI	GCGC	2 cut(s)	222, 224
BstKTI	GATC	1 cut(s)	28
BstMBI	GATC	1 cut(s)	25
BstMWI	GCNNNNNNNGC	1 cut(s)	233
BstUI	CGCG	1 cut(s)	222
BstV1I	GCAGC	2 cut(s)	211, 229
Cac8I	GCNNGC	1 cut(s)	222
CfoI	GCGC	2 cut(s)	222, 224
Cfr13I	GGNCC	1 cut(s)	57
CseI	GACGC	1 cut(s)	65
CviAII	CATG	1 cut(s)	35
CviJI	RGCY	5 cut(s)	49, 68, 122, 155, 212
CviKI_1	RGCY	5 cut(s)	49, 68, 122, 155, 212
DdeI	CTNAG	2 cut(s)	132, 176
DpnI	GATC	1 cut(s)	27
DpnII	GATC	1 cut(s)	25
Ecl136II	GAGCTC	1 cut(s)	68
Eco24I	GRGCYC	1 cut(s)	70
Eco47I	GGWCC	1 cut(s)	57
Eco53kI	GAGCTC	1 cut(s)	68
Eco57I	CTGAAG	1 cut(s)	258
Eco88I	CYCGRG	1 cut(s)	71
EcoICRI	GAGCTC	1 cut(s)	68
EcoT38I	GRGCYC	1 cut(s)	70
FaeI	CATG	1 cut(s)	38
FaiI	YATR	2 cut(s)	36, 206
FatI	CATG	1 cut(s)	34
FauI	CCCGC	1 cut(s)	273
Fnu4HI	GCNGC	2 cut(s)	218, 225
FriOI	GRGCYC	1 cut(s)	70
Fsp4HI	GCNGC	2 cut(s)	218, 225
GlaI	GCGC	2 cut(s)	221, 223
GluI	GCNGC	2 cut(s)	218, 225
HgaI	GACGC	1 cut(s)	65
HhaI	GCGC	2 cut(s)	222, 224
Hin1II	CATG	1 cut(s)	38
Hin6I	GCGC	2 cut(s)	220, 222
HinP1I	GCGC	2 cut(s)	220, 222
Hpy166II	GTNNAC	1 cut(s)	185
Hpy188III	TCNNGA	1 cut(s)	71
Hpy8I	GTNNAC	1 cut(s)	185
HpyAV	CCTTC	1 cut(s)	83
HpyCH4V	TGCA	1 cut(s)	217
HpyF10VI	GCNNNNNNNGC	1 cut(s)	233
HpyF3I	CTNAG	2 cut(s)	132, 176
Hsp92II	CATG	1 cut(s)	38
HspAI	GCGC	2 cut(s)	220, 222
Kzo9I	GATC	1 cut(s)	25
LmnI	GCTCC	2 cut(s)	119, 277
LpnPI	CCDG	4 cut(s)	36, 40, 73, 108
Lsp1109I	GCAGC	2 cut(s)	211, 229
LweI	GCATC	1 cut(s)	88
MaeIII	GTNAC	1 cut(s)	194
MalI	GATC	1 cut(s)	27
MbiI	CCGCTC	1 cut(s)	280
MboI	GATC	1 cut(s)	25
MfeI	CAATTG	2 cut(s)	231, 293
MhlI	GDGCHC	1 cut(s)	70
MluCI	AATT	2 cut(s)	231, 293
MnlI	CCTC	3 cut(s)	106, 202, 238
MunI	CAATTG	2 cut(s)	231, 293
Mva1269I	GAATGC	1 cut(s)	169
MvnI	CGCG	1 cut(s)	222
MwoI	GCNNNNNNNGC	1 cut(s)	233
NdeII	GATC	1 cut(s)	25
NlaIII	CATG	1 cut(s)	38
NlaIV	GGNNCC	1 cut(s)	94
NspV	TTCGAA	1 cut(s)	18
PaeR7I	CTCGAG	1 cut(s)	71
PauI	GCGCGC	1 cut(s)	220
PctI	GAATGC	1 cut(s)	169
PkrI	GCNGC	2 cut(s)	219, 226
Psp124BI	GAGCTC	1 cut(s)	70
PspN4I	GGNNCC	1 cut(s)	94
PspPI	GGNCC	1 cut(s)	57
PteI	GCGCGC	1 cut(s)	220
SacI	GAGCTC	1 cut(s)	70
SatI	GCNGC	2 cut(s)	218, 225
Sau3AI	GATC	1 cut(s)	25
Sau96I	GGNCC	1 cut(s)	57
SduI	GDGCHC	1 cut(s)	70
SetI	ASST	6 cut(s)	25, 51, 70, 117, 124, 157
SfaNI	GCATC	1 cut(s)	88
Sfr274I	CTCGAG	1 cut(s)	71
SfuI	TTCGAA	1 cut(s)	18
SinI	GGWCC	1 cut(s)	57
SlaI	CTCGAG	1 cut(s)	71
SmlI	CTYRAG	1 cut(s)	71
SmoI	CTYRAG	1 cut(s)	71
Sse9I	AATT	2 cut(s)	231, 293
SsiI	CCGC	1 cut(s)	280
SstI	GAGCTC	1 cut(s)	70
TaqI	TCGA	2 cut(s)	18, 72
TasI	AATT	2 cut(s)	231, 293
TseI	GCWGC	2 cut(s)	217, 224
TspDTI	ATGAA	1 cut(s)	23
TspGWI	ACGGA	1 cut(s)	182
VpaK11BI	GGWCC	1 cut(s)	57
XhoI	CTCGAG	1 cut(s)	71

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.