WRKY transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G18860 |
| fragaria_vesca | FvH4_5g15340 |
| malus_domestica | MD06G1189100.v1.1 MD14G1196100.v1.1 |
| prunus_persica | Prupe.5G187800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0180741 |
| rosa_laevigata | RLG00000005236 |
| rosa_multiflora | Rmu_sc0007457.1_g000017 |
| rosa_roxburghii | Rroxscaffold_3G00272600 |
| rosa_rugosa | Rorug06G0435400 |
| rosa_samantha | Rh7AG037000 Rh7BG036800 Rh7CG038500 Rh7DG037000 |
| rosa_wichuraiana | Rw7G003060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 480 |
| Acc36I | ACCTGC | 1 cut(s) | 725 |
| AccB1I | GGYRCC | 1 cut(s) | 718 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1142 |
| AciI | CCGC | 2 cut(s) | 986, 1149 |
| AclWI | GGATC | 4 cut(s) | 46, 160, 532, 1498 |
| AcoI | YGGCCR | 1 cut(s) | 746 |
| AcsI | RAATTY | 5 cut(s) | 688, 1328, 1345, 1814, 1942 |
| AcuI | CTGAAG | 2 cut(s) | 380, 693 |
| AfaI | GTAC | 8 cut(s) | 66, 368, 392, 574, 963, 975, 1846, 1897 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 35, 715, 1142, 1604 |
| AflIII | ACRYGT | 2 cut(s) | 993, 1413 |
| AhlI | ACTAGT | 1 cut(s) | 575 |
| AjnI | CCWGG | 3 cut(s) | 159, 743, 2020 |
| AleI | CACNNNNGTG | 1 cut(s) | 952 |
| Alw26I | GTCTC | 3 cut(s) | 52, 514, 2022 |
| AlwI | GGATC | 4 cut(s) | 46, 160, 532, 1498 |
| Ama87I | CYCGRG | 1 cut(s) | 1952 |
| AoxI | GGCC | 3 cut(s) | 746, 1126, 1146 |
| ApoI | RAATTY | 5 cut(s) | 688, 1328, 1345, 1814, 1942 |
| AspLEI | GCGC | 1 cut(s) | 2009 |
| AspS9I | GGNCC | 1 cut(s) | 1146 |
| AsuC2I | CCSGG | 3 cut(s) | 1120, 1953, 1954 |
| AsuHPI | GGTGA | 8 cut(s) | 180, 344, 1025, 1252, 1346, 1802, 1838, 2036 |
| AvaI | CYCGRG | 1 cut(s) | 1952 |
| BaeGI | GKGCMC | 3 cut(s) | 681, 723, 1999 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1879, 1912 |
| BalI | TGGCCA | 1 cut(s) | 748 |
| BanI | GGYRCC | 1 cut(s) | 718 |
| BanII | GRGCYC | 1 cut(s) | 1450 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1834, 1837, 1866, 1869 |
| BccI | CCATC | 7 cut(s) | 492, 499, 860, 958, 1007, 1144, 1300 |
| BciT130I | CCWGG | 3 cut(s) | 161, 745, 2022 |
| BciVI | GTATCC | 1 cut(s) | 1172 |
| BclI | TGATCA | 2 cut(s) | 97, 256 |
| BcnI | CCSGG | 3 cut(s) | 1120, 1953, 1954 |
| BcoDI | GTCTC | 3 cut(s) | 52, 514, 2022 |
| BcuI | ACTAGT | 1 cut(s) | 575 |
| BfaI | CTAG | 9 cut(s) | 75, 318, 462, 534, 576, 629, 822, 1760, 2031 |
| BfmI | CTRYAG | 1 cut(s) | 1077 |
| BfuAI | ACCTGC | 1 cut(s) | 725 |
| BfuI | GTATCC | 1 cut(s) | 1172 |
| BmcAI | AGTACT | 2 cut(s) | 368, 574 |
| Bme1390I | CCNGG | 6 cut(s) | 161, 745, 1120, 1953, 1954, 2022 |
| BmeT110I | CYCGRG | 1 cut(s) | 1952 |
| BmgT120I | GGNCC | 1 cut(s) | 1146 |
| BmiI | GGNNCC | 4 cut(s) | 252, 720, 1147, 1433 |
| BmrFI | CCNGG | 6 cut(s) | 161, 745, 1120, 1953, 1954, 2022 |
| BmrI | ACTGGG | 1 cut(s) | 803 |
| BmsI | GCATC | 5 cut(s) | 278, 860, 1619, 1919, 2018 |
| BmuI | ACTGGG | 1 cut(s) | 803 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 494, 526 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1690 |
| BpuEI | CTTGAG | 2 cut(s) | 749, 1587 |
| BpuMI | CCSGG | 3 cut(s) | 1120, 1953, 1954 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1909 |
| BsaI | GGTCTC | 1 cut(s) | 514 |
| BsaJI | CCNNGG | 5 cut(s) | 444, 520, 723, 1653, 1952 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 980, 1010, 1573, 1603 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 35, 715, 1142, 1604 |
| Bse1I | ACTGG | 5 cut(s) | 66, 809, 874, 959, 1756 |
| Bse3DI | GCAATG | 4 cut(s) | 942, 1432, 1638, 1979 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1909 |
| BseBI | CCWGG | 3 cut(s) | 161, 745, 2022 |
| BseDI | CCNNGG | 5 cut(s) | 444, 520, 723, 1653, 1952 |
| BseGI | GGATG | 8 cut(s) | 182, 454, 556, 875, 1136, 1298, 1594, 1910 |
| BseJI | GATNNNNATC | 1 cut(s) | 1909 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 35, 715, 1142, 1604 |
| BseMI | GCAATG | 4 cut(s) | 942, 1432, 1638, 1979 |
| BseMII | CTCAG | 2 cut(s) | 529, 1823 |
| BseNI | ACTGG | 5 cut(s) | 66, 809, 874, 959, 1756 |
| BseRI | GAGGAG | 3 cut(s) | 1575, 1578, 1581 |
| BseSI | GKGCMC | 3 cut(s) | 681, 723, 1999 |
| BseYI | CCCAGC | 1 cut(s) | 1781 |
| BsgI | GTGCAG | 2 cut(s) | 801, 1683 |
| BshFI | GGCC | 3 cut(s) | 748, 1128, 1148 |
| BshNI | GGYRCC | 1 cut(s) | 718 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1952 |
| BsiSI | CCGG | 3 cut(s) | 1101, 1120, 1953 |
| BslFI | GGGAC | 2 cut(s) | 1300, 1750 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 35, 715, 1142, 1604 |
| BsmAI | GTCTC | 3 cut(s) | 52, 514, 2022 |
| BsmBI | CGTCTC | 1 cut(s) | 2022 |
| BsmFI | GGGAC | 2 cut(s) | 1300, 1750 |
| BsmI | GAATGC | 1 cut(s) | 1761 |
| BsnI | GGCC | 3 cut(s) | 748, 1128, 1148 |
| Bso31I | GGTCTC | 1 cut(s) | 514 |
| BsoBI | CYCGRG | 1 cut(s) | 1952 |
| Bsp1286I | GDGCHC | 4 cut(s) | 681, 723, 1450, 1999 |
| BspACI | CCGC | 2 cut(s) | 986, 1149 |
| BspANI | GGCC | 3 cut(s) | 748, 1128, 1148 |
| BspCNI | CTCAG | 2 cut(s) | 528, 1822 |
| BspHI | TCATGA | 1 cut(s) | 91 |
| BspLI | GGNNCC | 4 cut(s) | 252, 720, 1147, 1433 |
| BspMAI | CTGCAG | 1 cut(s) | 1081 |
| BspMI | ACCTGC | 1 cut(s) | 725 |
| BspPI | GGATC | 4 cut(s) | 46, 160, 532, 1498 |
| BspT107I | GGYRCC | 1 cut(s) | 718 |
| BspTNI | GGTCTC | 1 cut(s) | 514 |
| BsrDI | GCAATG | 4 cut(s) | 942, 1432, 1638, 1979 |
| BsrI | ACTGG | 5 cut(s) | 66, 809, 874, 959, 1756 |
| BssECI | CCNNGG | 5 cut(s) | 444, 520, 723, 1653, 1952 |
| BssT1I | CCWWGG | 4 cut(s) | 444, 520, 723, 1653 |
| Bst2UI | CCWGG | 3 cut(s) | 161, 745, 2022 |
| Bst4CI | ACNGT | 3 cut(s) | 569, 935, 1727 |
| Bst6I | CTCTTC | 7 cut(s) | 45, 50, 135, 339, 708, 1237, 1254 |
| BstC8I | GCNNGC | 2 cut(s) | 218, 703 |
| BstDEI | CTNAG | 7 cut(s) | 370, 515, 753, 1264, 1496, 1690, 1809 |
| BstEII | GGTNACC | 1 cut(s) | 1826 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 33, 713, 1602 |
| BstF5I | GGATG | 8 cut(s) | 182, 454, 556, 875, 1136, 1298, 1594, 1910 |
| BstHHI | GCGC | 1 cut(s) | 2009 |
| BstMAI | GTCTC | 3 cut(s) | 52, 514, 2022 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 702, 779, 1157, 1522, 1655, 1664, 1694 |
| BstNI | CCWGG | 3 cut(s) | 161, 745, 2022 |
| BstNSI | RCATGY | 3 cut(s) | 997, 1417, 1561 |
| BstPI | GGTNACC | 1 cut(s) | 1826 |
| BstSCI | CCNGG | 6 cut(s) | 159, 743, 1118, 1951, 1952, 2020 |
| BstSFI | CTRYAG | 1 cut(s) | 1077 |
| BstSLI | GKGCMC | 3 cut(s) | 681, 723, 1999 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1060 |
| BsuI | GTATCC | 1 cut(s) | 1172 |
| BsuRI | GGCC | 3 cut(s) | 748, 1128, 1148 |
| BtsCI | GGATG | 8 cut(s) | 182, 454, 556, 875, 1136, 1298, 1594, 1910 |
| BtsIMutI | CAGTG | 3 cut(s) | 816, 837, 881 |
| BveI | ACCTGC | 1 cut(s) | 725 |
| Cac8I | GCNNGC | 2 cut(s) | 218, 703 |
| CciI | TCATGA | 1 cut(s) | 91 |
| CfoI | GCGC | 1 cut(s) | 2009 |
| Cfr13I | GGNCC | 1 cut(s) | 1146 |
| Cfr9I | CCCGGG | 1 cut(s) | 1952 |
| Csp6I | GTAC | 8 cut(s) | 65, 367, 391, 573, 962, 974, 1845, 1896 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1962, 1997 |
| CviQI | GTAC | 8 cut(s) | 65, 367, 391, 573, 962, 974, 1845, 1896 |
| DdeI | CTNAG | 7 cut(s) | 370, 515, 753, 1264, 1496, 1690, 1809 |
| EaeI | YGGCCR | 1 cut(s) | 746 |
| Eam1104I | CTCTTC | 7 cut(s) | 45, 50, 135, 339, 708, 1237, 1254 |
| EarI | CTCTTC | 7 cut(s) | 45, 50, 135, 339, 708, 1237, 1254 |
| Eco130I | CCWWGG | 4 cut(s) | 444, 520, 723, 1653 |
| Eco24I | GRGCYC | 1 cut(s) | 1450 |
| Eco31I | GGTCTC | 1 cut(s) | 514 |
| Eco32I | GATATC | 1 cut(s) | 225 |
| Eco57I | CTGAAG | 2 cut(s) | 380, 693 |
| Eco88I | CYCGRG | 1 cut(s) | 1952 |
| Eco91I | GGTNACC | 1 cut(s) | 1826 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 33, 713, 1602 |
| EcoO65I | GGTNACC | 1 cut(s) | 1826 |
| EcoRI | GAATTC | 2 cut(s) | 688, 1942 |
| EcoRII | CCWGG | 3 cut(s) | 159, 743, 2020 |
| EcoRV | GATATC | 1 cut(s) | 225 |
| EcoT14I | CCWWGG | 4 cut(s) | 444, 520, 723, 1653 |
| EcoT38I | GRGCYC | 1 cut(s) | 1450 |
| ErhI | CCWWGG | 4 cut(s) | 444, 520, 723, 1653 |
| Esp3I | CGTCTC | 1 cut(s) | 2022 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 114, 146, 353, 385, 604, 636 |
| FaqI | GGGAC | 2 cut(s) | 1300, 1750 |
| FauNDI | CATATG | 1 cut(s) | 1015 |
| FbaI | TGATCA | 2 cut(s) | 97, 256 |
| FokI | GGATG | 8 cut(s) | 169, 461, 563, 882, 1123, 1285, 1581, 1917 |
| FriOI | GRGCYC | 1 cut(s) | 1450 |
| FspBI | CTAG | 9 cut(s) | 75, 318, 462, 534, 576, 629, 822, 1760, 2031 |
| GlaI | GCGC | 1 cut(s) | 2008 |
| GsaI | CCCAGC | 1 cut(s) | 1785 |
| HaeIII | GGCC | 3 cut(s) | 748, 1128, 1148 |
| HapII | CCGG | 3 cut(s) | 1101, 1120, 1953 |
| HhaI | GCGC | 1 cut(s) | 2009 |
| Hin6I | GCGC | 1 cut(s) | 2007 |
| HinP1I | GCGC | 1 cut(s) | 2007 |
| HindIII | AAGCTT | 1 cut(s) | 613 |
| HinfI | GANTC | 7 cut(s) | 71, 311, 349, 497, 599, 1215, 1400 |
| HpaII | CCGG | 3 cut(s) | 1101, 1120, 1953 |
| HphI | GGTGA | 8 cut(s) | 180, 344, 1025, 1252, 1346, 1802, 1838, 2036 |
| Hpy188I | TCNGA | 8 cut(s) | 43, 378, 502, 604, 741, 1198, 1399, 1812 |
| Hpy188III | TCNNGA | 7 cut(s) | 92, 101, 425, 488, 766, 1166, 1212 |
| Hpy99I | CGWCG | 2 cut(s) | 235, 497 |
| HpyAV | CCTTC | 4 cut(s) | 238, 1013, 1608, 1986 |
| HpyCH4III | ACNGT | 3 cut(s) | 569, 935, 1727 |
| HpyCH4IV | ACGT | 1 cut(s) | 2015 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 702, 779, 1157, 1522, 1655, 1664, 1694 |
| HpyF3I | CTNAG | 7 cut(s) | 370, 515, 753, 1264, 1496, 1690, 1809 |
| HpySE526I | ACGT | 1 cut(s) | 2015 |
| HspAI | GCGC | 1 cut(s) | 2007 |
| Ksp22I | TGATCA | 2 cut(s) | 97, 256 |
| LmnI | GCTCC | 3 cut(s) | 1422, 1607, 1956 |
| LweI | GCATC | 5 cut(s) | 278, 860, 1619, 1919, 2018 |
| MaeI | CTAG | 9 cut(s) | 75, 318, 462, 534, 576, 629, 822, 1760, 2031 |
| MaeII | ACGT | 1 cut(s) | 2015 |
| MaeIII | GTNAC | 5 cut(s) | 451, 845, 1790, 1826, 2024 |
| MfeI | CAATTG | 1 cut(s) | 456 |
| MhlI | GDGCHC | 4 cut(s) | 681, 723, 1450, 1999 |
| MlsI | TGGCCA | 1 cut(s) | 748 |
| MluNI | TGGCCA | 1 cut(s) | 748 |
| MlyI | GAGTC | 1 cut(s) | 608 |
| MmeI | TCCRAC | 2 cut(s) | 121, 1277 |
| Mox20I | TGGCCA | 1 cut(s) | 748 |
| MscI | TGGCCA | 1 cut(s) | 748 |
| MseI | TTAA | 2 cut(s) | 1004, 1575 |
| MslI | CAYNNNNRTG | 2 cut(s) | 952, 1058 |
| Msp20I | TGGCCA | 1 cut(s) | 748 |
| MspA1I | CMGCKG | 3 cut(s) | 1082, 1667, 1697 |
| MspI | CCGG | 3 cut(s) | 1101, 1120, 1953 |
| MspR9I | CCNGG | 6 cut(s) | 161, 745, 1120, 1953, 1954, 2022 |
| MunI | CAATTG | 1 cut(s) | 456 |
| Mva1269I | GAATGC | 1 cut(s) | 1761 |
| MvaI | CCWGG | 3 cut(s) | 161, 745, 2022 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 702, 779, 1157, 1522, 1655, 1664, 1694 |
| NciI | CCSGG | 3 cut(s) | 1120, 1953, 1954 |
| NdeI | CATATG | 1 cut(s) | 1015 |
| NlaIV | GGNNCC | 4 cut(s) | 252, 720, 1147, 1433 |
| NmuCI | GTSAC | 4 cut(s) | 845, 1790, 1826, 2024 |
| NspI | RCATGY | 3 cut(s) | 997, 1417, 1561 |
| OliI | CACNNNNGTG | 1 cut(s) | 952 |
| PagI | TCATGA | 1 cut(s) | 91 |
| PciI | ACATGT | 2 cut(s) | 993, 1413 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 239, 498, 1937 |
| PctI | GAATGC | 1 cut(s) | 1761 |
| PfeI | GAWTC | 6 cut(s) | 71, 311, 349, 497, 1215, 1400 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1142 |
| PleI | GAGTC | 1 cut(s) | 607 |
| PpsI | GAGTC | 1 cut(s) | 607 |
| PscI | ACATGT | 2 cut(s) | 993, 1413 |
| PsiI | TTATAA | 1 cut(s) | 480 |
| Psp6I | CCWGG | 3 cut(s) | 159, 743, 2020 |
| PspEI | GGTNACC | 1 cut(s) | 1826 |
| PspFI | CCCAGC | 1 cut(s) | 1781 |
| PspGI | CCWGG | 3 cut(s) | 159, 743, 2020 |
| PspN4I | GGNNCC | 4 cut(s) | 252, 720, 1147, 1433 |
| PspPI | GGNCC | 1 cut(s) | 1146 |
| PstI | CTGCAG | 1 cut(s) | 1081 |
| PvuII | CAGCTG | 3 cut(s) | 1082, 1667, 1697 |
| RsaI | GTAC | 8 cut(s) | 66, 368, 392, 574, 963, 975, 1846, 1897 |
| RsaNI | GTAC | 8 cut(s) | 65, 367, 391, 573, 962, 974, 1845, 1896 |
| RseI | CAYNNNNRTG | 2 cut(s) | 952, 1058 |
| SaqAI | TTAA | 2 cut(s) | 1004, 1575 |
| Sau96I | GGNCC | 1 cut(s) | 1146 |
| ScaI | AGTACT | 2 cut(s) | 368, 574 |
| SchI | GAGTC | 1 cut(s) | 608 |
| ScrFI | CCNGG | 6 cut(s) | 161, 745, 1120, 1953, 1954, 2022 |
| SduI | GDGCHC | 4 cut(s) | 681, 723, 1450, 1999 |
| SfaNI | GCATC | 5 cut(s) | 278, 860, 1619, 1919, 2018 |
| SfcI | CTRYAG | 1 cut(s) | 1077 |
| SmaI | CCCGGG | 1 cut(s) | 1954 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 952, 1058 |
| SmlI | CTYRAG | 2 cut(s) | 764, 1602 |
| SmoI | CTYRAG | 2 cut(s) | 764, 1602 |
| SpeI | ACTAGT | 1 cut(s) | 575 |
| SsiI | CCGC | 2 cut(s) | 986, 1149 |
| SspI | AATATT | 1 cut(s) | 475 |
| SspMI | CTAG | 9 cut(s) | 75, 318, 462, 534, 576, 629, 822, 1760, 2031 |
| StyD4I | CCNGG | 6 cut(s) | 159, 743, 1118, 1951, 1952, 2020 |
| StyI | CCWWGG | 4 cut(s) | 444, 520, 723, 1653 |
| TaaI | ACNGT | 3 cut(s) | 569, 935, 1727 |
| TaiI | ACGT | 1 cut(s) | 2018 |
| TaqI | TCGA | 2 cut(s) | 286, 686 |
| TatI | WGTACW | 3 cut(s) | 366, 572, 1844 |
| TauI | GCSGC | 1 cut(s) | 1151 |
| TfiI | GAWTC | 6 cut(s) | 71, 311, 349, 497, 1215, 1400 |
| Tru1I | TTAA | 2 cut(s) | 1004, 1575 |
| Tru9I | TTAA | 2 cut(s) | 1004, 1575 |
| TscAI | CASTG | 3 cut(s) | 816, 837, 881 |
| TseFI | GTSAC | 4 cut(s) | 845, 1790, 1826, 2024 |
| Tsp45I | GTSAC | 4 cut(s) | 845, 1790, 1826, 2024 |
| TspGWI | ACGGA | 3 cut(s) | 979, 1129, 1191 |
| TspMI | CCCGGG | 1 cut(s) | 1952 |
| TspRI | CASTG | 3 cut(s) | 816, 837, 881 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1142 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 33, 713, 1602 |
| XapI | RAATTY | 5 cut(s) | 688, 1328, 1345, 1814, 1942 |
| XceI | RCATGY | 3 cut(s) | 997, 1417, 1561 |
| XmaI | CCCGGG | 1 cut(s) | 1952 |
| XspI | CTAG | 9 cut(s) | 75, 318, 462, 534, 576, 629, 822, 1760, 2031 |
| ZrmI | AGTACT | 2 cut(s) | 368, 574 |