Prupe.5G207100_v2.0.a1

Kelch motif

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
16527620 .. 16534874
7255 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G207100.1

Sequence Viewer

Length: 1818 bp
ATGAGGTGGGAAAGGGTTCAGCTACAGCCTAAACAAGCTCACCAGCAACAGCAACAGCAACAACAAGAATTGTTGTGTGAGGTGTCTGGGCCAGGGAAGAGGTGGGGGCACACCTGCAACGCCATTAAAGAAGGGAGGTTGCTATATGTCTTTGGGGGTTATGGCAAAGATAACTGTCAGACCAACCAAGTTCACGTTTTCGACACTGCTACGCATACATGGAGTAAGCCGGTGATAAAAGGAACCCCTCCAACTCCAAGGGACAGCCACAGCTGTACCGCCGTTGGTGATAATCTCTTCGTTTTTGGGGGTACAGATGGGATGAACCCTCTCAAGGATTTGCATATATTAGACACCTCTTCACATACATGGATATCGCCAAGTTTAAGAGGTGATGGACCGGAGGCACGAGAGGGTCATAGTGCAGCCCTTGTTGGGAAACGGCTTTTTATATTTGGTGGCTGCGGAAAATCATCTAATAATAGCGATGAAGTGTACTACAATGATCTTTACATTTTGAATACAGAGACATTTGTATGGAAACATGCTACAACATCAGGCAACCCACCATCTCCACGTGATAGCCATACTTGTTCATCTTGGAAGAACAAAATATTTGTGATTGGTGGTGAAGATGGTCATGATTACTATTTATCCGATGTCCATATCCTTGATGCAGATACTCTAATGTGGAGGGAGCTGAACACTTCAGGCCAGCTTTTGCCACCCCGAGCTGGTCATTCAACTGTTGCTTTTGGGAAGAATTTATTTGTTTTTGGTGGATTCACAGATGCCCAAAATCTATACAATGACCTCCACATGCTTGATGTTGATACTGGTGTATGGACCAAGGTGATAACTGCAGGTGATGGGCCTTCTGCTAGATTTTCTGTTGCTGGGGACTGCTTGGATCCTGTGAAGGGAGGTGTACTTGTGTTTATTGGTGGTTGCAATAAAAGTCTTGAGGCACTGGATGACATGTATTACTTATATACAGGACTTACCAGGGAGAGTGAACGGAGGCTAGAGAAATTATCTTTGAGGAAGCAATTAAAGCTAAAGTGCCAAGAGCAAAATCTCACTTCTTTTCACGACAAGCCTCTTGTTAACGTTGAAACTGGTGCAGATATGAGGCAACCCATGACAGTTCCATTTTATGCCCAACCATGTAGACAGAATATCCCATTGAATCAATCGCAGCTTCTTCTGGGAAAGAAGACATTTCAAGCAAAGGTTACTGAAAAACTTTTTGATGGATATACGATTGAAACTGTCATTGATGGAAAGCCTCTTCGTGGTATTTTGTTTTCCAACAAGCCAGACATTCACAACATAACTACTCCTAATTCCAGCAGGAAGCGGGCTGCCAGCGATGCTGGTGATTTAATGTCAAATGGTGATTACAACAGCAAATCAAAAACTTCTAGGAGCGTCAGGCAAGAGACGGTAGATCACGCACAGGCAGATAATGTTCATGGCAAGGAGTCCATATCACATGAGCAGACAGAAGCTGCTGCAGCGTCCGTTTCTAAGAATCAAGCATATTCTGATGCTTCTCATCTGCATAAGGTTAGTGGAAAACCTGATCAGTCAGTGACTCCATTGAATCTGGGTGATAATCAGACAAATGATGCTTCAAACTTTAACACTGAAATTGTGGGAGAAGACAGGAGTCACAGGACAACTGATGCACCAAATTTTGACTCTGAAGTTATGAAGGAAAATTTGTCTGCCATAGAAAATACAACCGTCAGCTCATCCCGAAACCAAGATGGCAGGAGACTAACTGAAGGACACAGTGAAGCAACATCTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

606

Amino Acids

66.79

Weight (kDa)

6.22

Isoelectric Point (pI)

39.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 122, 854
Acc36I ACCTGC 2 cut(s) 122, 854
AccI GTMKAC 1 cut(s) 1171
AciI CCGC 3 cut(s) 279, 465, 1360
AclI AACGTT 1 cut(s) 1110
AclWI GGATC 2 cut(s) 905, 918
AcsI RAATTY 3 cut(s) 763, 1696, 1723
AcuI CTGAAG 3 cut(s) 693, 1728, 1809
AcvI CACGTG 1 cut(s) 578
AfaI GTAC 4 cut(s) 277, 313, 497, 930
AfiI CCNNNNNNNGG 5 cut(s) 334, 435, 734, 920, 1295
AflIII ACRYGT 1 cut(s) 978
AgsI TTSAA 8 cut(s) 520, 744, 1115, 1189, 1226, 1268, 1606, 1638
AjnI CCWGG 2 cut(s) 91, 1004
Alw26I GTCTC 3 cut(s) 521, 1436, 1774
AlwI GGATC 2 cut(s) 905, 918
AlwNI CAGNNNCTG 1 cut(s) 1511
Ama87I CYCGRG 1 cut(s) 729
AoxI GGCC 3 cut(s) 89, 712, 872
ApeKI GCWGC 7 cut(s) 425, 462, 1198, 1364, 1511, 1514, 1517
ApoI RAATTY 3 cut(s) 763, 1696, 1723
Asp700I GAANNNNTTC 1 cut(s) 15
AspS9I GGNCC 4 cut(s) 89, 398, 846, 872
AvaI CYCGRG 1 cut(s) 729
AvaII GGWCC 2 cut(s) 398, 846
BaeGI GKGCMC 1 cut(s) 111
BaeI ACNNNNGTAYC 4 cut(s) 259, 292, 825, 858
BamHI GGATCC 1 cut(s) 910
BauI CACGAG 1 cut(s) 408
BbrPI CACGTG 1 cut(s) 578
BbsI GAAGAC 2 cut(s) 1223, 1671
BbvI GCAGC 7 cut(s) 437, 449, 1210, 1351, 1498, 1501, 1529
BccI CCATC 8 cut(s) 311, 389, 577, 629, 863, 1247, 1274, 1766
BceAI ACGGC 2 cut(s) 266, 458
BciT130I CCWGG 2 cut(s) 93, 1006
BclI TGATCA 1 cut(s) 1585
BcoDI GTCTC 3 cut(s) 521, 1436, 1774
BfaI CTAG 3 cut(s) 882, 1025, 1425
BfmI CTRYAG 3 cut(s) 23, 861, 1515
BfuAI ACCTGC 2 cut(s) 122, 854
BisI GCNGC 7 cut(s) 426, 463, 1199, 1365, 1512, 1515, 1518
BlsI GCNGC 7 cut(s) 427, 464, 1200, 1366, 1513, 1516, 1519
Bme1390I CCNGG 2 cut(s) 93, 1006
Bme18I GGWCC 2 cut(s) 398, 846
BmeT110I CYCGRG 1 cut(s) 729
BmgT120I GGNCC 4 cut(s) 89, 398, 846, 872
BmiI GGNNCC 2 cut(s) 244, 912
BmrFI CCNGG 2 cut(s) 93, 1006
BmsI GCATC 6 cut(s) 664, 781, 1363, 1540, 1621, 1678
BoxI GACNNNNGTC 1 cut(s) 1671
BpiI GAAGAC 2 cut(s) 1223, 1671
BpuEI CTTGAG 2 cut(s) 317, 983
BsaAI YACGTR 1 cut(s) 578
BsaJI CCNNGG 4 cut(s) 92, 257, 849, 1005
BsaWI WCCGGW 1 cut(s) 400
Bsc4I CCNNNNNNNGG 5 cut(s) 334, 435, 734, 920, 1295
Bse118I RCCGGY 1 cut(s) 229
Bse1I ACTGG 3 cut(s) 841, 975, 1123
BseBI CCWGG 2 cut(s) 93, 1006
BseDI CCNNGG 4 cut(s) 92, 257, 849, 1005
BseGI GGATG 3 cut(s) 327, 979, 1757
BseLI CCNNNNNNNGG 5 cut(s) 334, 435, 734, 920, 1295
BseNI ACTGG 3 cut(s) 841, 975, 1123
BseSI GKGCMC 1 cut(s) 111
BseXI GCAGC 7 cut(s) 437, 449, 1210, 1351, 1498, 1501, 1529
BseYI CCCAGC 1 cut(s) 896
BsgI GTGCAG 2 cut(s) 444, 1143
BshFI GGCC 3 cut(s) 91, 714, 874
BsiHKCI CYCGRG 1 cut(s) 729
BsiSI CCGG 2 cut(s) 230, 401
BslFI GGGAC 2 cut(s) 275, 914
BslI CCNNNNNNNGG 5 cut(s) 334, 435, 734, 920, 1295
BsmAI GTCTC 3 cut(s) 521, 1436, 1774
BsmBI CGTCTC 1 cut(s) 1436
BsmFI GGGAC 2 cut(s) 275, 914
BsnI GGCC 3 cut(s) 91, 714, 874
BsoBI CYCGRG 1 cut(s) 729
Bsp1286I GDGCHC 1 cut(s) 111
Bsp143I GATC 4 cut(s) 505, 910, 1450, 1585
BspACI CCGC 3 cut(s) 279, 465, 1360
BspANI GGCC 3 cut(s) 91, 714, 874
BspHI TCATGA 1 cut(s) 640
BspLI GGNNCC 2 cut(s) 244, 912
BspMAI CTGCAG 2 cut(s) 865, 1519
BspMI ACCTGC 2 cut(s) 122, 854
BspPI GGATC 2 cut(s) 905, 918
BsrFI RCCGGY 1 cut(s) 229
BsrI ACTGG 3 cut(s) 841, 975, 1123
BssAI RCCGGY 1 cut(s) 229
BssECI CCNNGG 4 cut(s) 92, 257, 849, 1005
BssMI GATC 4 cut(s) 505, 910, 1450, 1585
BssSI CACGAG 1 cut(s) 408
BssT1I CCWWGG 2 cut(s) 257, 849
Bst2BI CACGAG 1 cut(s) 408
Bst2UI CCWGG 2 cut(s) 93, 1006
Bst4CI ACNGT 7 cut(s) 176, 748, 1147, 1273, 1447, 1750, 1799
Bst6I CTCTTC 4 cut(s) 92, 302, 364, 1296
BstBAI YACGTR 1 cut(s) 578
BstC8I GCNNGC 3 cut(s) 716, 1362, 1369
BstDEI CTNAG 1 cut(s) 1530
BstF5I GGATG 3 cut(s) 327, 979, 1757
BstKTI GATC 4 cut(s) 508, 913, 1453, 1588
BstMAI GTCTC 3 cut(s) 521, 1436, 1774
BstMBI GATC 4 cut(s) 505, 910, 1450, 1585
BstMWI GCNNNNNNNGC 3 cut(s) 1054, 1373, 1517
BstNI CCWGG 2 cut(s) 93, 1006
BstNSI RCATGY 3 cut(s) 548, 823, 982
BstPAI GACNNNNGTC 1 cut(s) 1671
BstSCI CCNGG 2 cut(s) 91, 1004
BstSFI CTRYAG 3 cut(s) 23, 861, 1515
BstSLI GKGCMC 1 cut(s) 111
BstV1I GCAGC 7 cut(s) 437, 449, 1210, 1351, 1498, 1501, 1529
BstV2I GAAGAC 2 cut(s) 1223, 1671
BstX2I RGATCY 1 cut(s) 910
BstYI RGATCY 1 cut(s) 910
BsuRI GGCC 3 cut(s) 91, 714, 874
BtgZI GCGATG 2 cut(s) 501, 1386
BtsCI GGATG 3 cut(s) 327, 979, 1757
BtsI GCAGTG 1 cut(s) 204
BtsIMutI CAGTG 5 cut(s) 204, 968, 1599, 1647, 1804
BveI ACCTGC 2 cut(s) 122, 854
Cac8I GCNNGC 3 cut(s) 716, 1362, 1369
CaiI CAGNNNCTG 1 cut(s) 1511
CciI TCATGA 1 cut(s) 640
Cfr10I RCCGGY 1 cut(s) 229
Cfr13I GGNCC 4 cut(s) 89, 398, 846, 872
CseI GACGC 2 cut(s) 1420, 1509
Csp6I GTAC 4 cut(s) 276, 312, 496, 929
CviQI GTAC 4 cut(s) 276, 312, 496, 929
DdeI CTNAG 1 cut(s) 1530
DpnI GATC 4 cut(s) 507, 912, 1452, 1587
DpnII GATC 4 cut(s) 505, 910, 1450, 1585
Eam1104I CTCTTC 4 cut(s) 92, 302, 364, 1296
EarI CTCTTC 4 cut(s) 92, 302, 364, 1296
Eco130I CCWWGG 2 cut(s) 257, 849
Eco32I GATATC 1 cut(s) 375
Eco47I GGWCC 2 cut(s) 398, 846
Eco57I CTGAAG 3 cut(s) 693, 1728, 1809
Eco72I CACGTG 1 cut(s) 578
Eco88I CYCGRG 1 cut(s) 729
EcoRII CCWGG 2 cut(s) 91, 1004
EcoRV GATATC 1 cut(s) 375
EcoT14I CCWWGG 2 cut(s) 257, 849
ErhI CCWWGG 2 cut(s) 257, 849
Esp3I CGTCTC 1 cut(s) 1436
FaqI GGGAC 2 cut(s) 275, 914
FauI CCCGC 1 cut(s) 1353
FbaI TGATCA 1 cut(s) 1585
FblI GTMKAC 1 cut(s) 1171
Fnu4HI GCNGC 7 cut(s) 426, 463, 1199, 1365, 1512, 1515, 1518
FokI GGATG 3 cut(s) 334, 986, 1744
Fsp4HI GCNGC 7 cut(s) 426, 463, 1199, 1365, 1512, 1515, 1518
FspBI CTAG 3 cut(s) 882, 1025, 1425
GluI GCNGC 7 cut(s) 426, 463, 1199, 1365, 1512, 1515, 1518
GsaI CCCAGC 1 cut(s) 900
HaeIII GGCC 3 cut(s) 91, 714, 874
HapII CCGG 2 cut(s) 230, 401
HgaI GACGC 2 cut(s) 1420, 1509
HincII GTYRAC 1 cut(s) 1108
HindII GTYRAC 1 cut(s) 1108
HinfI GANTC 8 cut(s) 783, 1189, 1484, 1534, 1597, 1606, 1672, 1703
HpaI GTTAAC 1 cut(s) 1108
HpaII CCGG 2 cut(s) 230, 401
Hpy166II GTNNAC 6 cut(s) 193, 496, 929, 1016, 1108, 1172
Hpy188I TCNGA 5 cut(s) 180, 658, 1549, 1623, 1708
Hpy188III TCNNGA 4 cut(s) 641, 962, 1091, 1761
Hpy8I GTNNAC 6 cut(s) 193, 496, 929, 1016, 1108, 1172
HpyAV CCTTC 5 cut(s) 125, 885, 913, 1711, 1784
HpyCH4III ACNGT 7 cut(s) 176, 748, 1147, 1273, 1447, 1750, 1799
HpyCH4IV ACGT 3 cut(s) 195, 577, 1110
HpyF10VI GCNNNNNNNGC 3 cut(s) 1054, 1373, 1517
HpyF3I CTNAG 1 cut(s) 1530
HpySE526I ACGT 3 cut(s) 195, 577, 1110
Ksp22I TGATCA 1 cut(s) 1585
KspAI GTTAAC 1 cut(s) 1108
Kzo9I GATC 4 cut(s) 505, 910, 1450, 1585
LmnI GCTCC 2 cut(s) 697, 1428
Lsp1109I GCAGC 7 cut(s) 437, 449, 1210, 1351, 1498, 1501, 1529
LweI GCATC 6 cut(s) 664, 781, 1363, 1540, 1621, 1678
MaeI CTAG 3 cut(s) 882, 1025, 1425
MaeII ACGT 3 cut(s) 195, 577, 1110
MaeIII GTNAC 3 cut(s) 1234, 1594, 1673
MalI GATC 4 cut(s) 507, 912, 1452, 1587
MboI GATC 4 cut(s) 505, 910, 1450, 1585
MflI RGATCY 1 cut(s) 910
MhlI GDGCHC 1 cut(s) 111
MluCI AATT 8 cut(s) 68, 763, 1031, 1049, 1345, 1653, 1696, 1723
MlyI GAGTC 4 cut(s) 1493, 1591, 1681, 1697
MmeI TCCRAC 2 cut(s) 275, 1335
MroXI GAANNNNTTC 1 cut(s) 15
MseI TTAA 6 cut(s) 126, 386, 1052, 1107, 1385, 1644
MslI CAYNNNNRTG 2 cut(s) 367, 535
MspA1I CMGCKG 1 cut(s) 273
MspI CCGG 2 cut(s) 230, 401
MspR9I CCNGG 2 cut(s) 93, 1006
MvaI CCWGG 2 cut(s) 93, 1006
MwoI GCNNNNNNNGC 3 cut(s) 1054, 1373, 1517
NdeII GATC 4 cut(s) 505, 910, 1450, 1585
NlaIV GGNNCC 2 cut(s) 244, 912
NmuCI GTSAC 2 cut(s) 1594, 1673
NspI RCATGY 3 cut(s) 548, 823, 982
PagI TCATGA 1 cut(s) 640
PaqCI CACCTGC 2 cut(s) 122, 854
PciI ACATGT 1 cut(s) 978
PdmI GAANNNNTTC 1 cut(s) 15
PfeI GAWTC 4 cut(s) 783, 1189, 1534, 1606
PkrI GCNGC 7 cut(s) 427, 464, 1200, 1366, 1513, 1516, 1519
PleI GAGTC 4 cut(s) 1492, 1591, 1680, 1697
PmaCI CACGTG 1 cut(s) 578
PmlI CACGTG 1 cut(s) 578
PpsI GAGTC 4 cut(s) 1492, 1591, 1680, 1697
Ppu21I YACGTR 1 cut(s) 578
PscI ACATGT 1 cut(s) 978
PshAI GACNNNNGTC 1 cut(s) 1671
Psp1406I AACGTT 1 cut(s) 1110
Psp6I CCWGG 2 cut(s) 91, 1004
PspCI CACGTG 1 cut(s) 578
PspFI CCCAGC 1 cut(s) 896
PspGI CCWGG 2 cut(s) 91, 1004
PspN4I GGNNCC 2 cut(s) 244, 912
PspPI GGNCC 4 cut(s) 89, 398, 846, 872
PstI CTGCAG 2 cut(s) 865, 1519
PstNI CAGNNNCTG 1 cut(s) 1511
PsuI RGATCY 1 cut(s) 910
PvuII CAGCTG 1 cut(s) 273
RsaI GTAC 4 cut(s) 277, 313, 497, 930
RsaNI GTAC 4 cut(s) 276, 312, 496, 929
RseI CAYNNNNRTG 2 cut(s) 367, 535
SaqAI TTAA 6 cut(s) 126, 386, 1052, 1107, 1385, 1644
SatI GCNGC 7 cut(s) 426, 463, 1199, 1365, 1512, 1515, 1518
Sau3AI GATC 4 cut(s) 505, 910, 1450, 1585
Sau96I GGNCC 4 cut(s) 89, 398, 846, 872
SchI GAGTC 4 cut(s) 1493, 1591, 1681, 1697
ScrFI CCNGG 2 cut(s) 93, 1006
SduI GDGCHC 1 cut(s) 111
SfaNI GCATC 6 cut(s) 664, 781, 1363, 1540, 1621, 1678
SfcI CTRYAG 3 cut(s) 23, 861, 1515
SinI GGWCC 2 cut(s) 398, 846
SmiMI CAYNNNNRTG 2 cut(s) 367, 535
SmlI CTYRAG 2 cut(s) 332, 962
SmoI CTYRAG 2 cut(s) 332, 962
Sse9I AATT 8 cut(s) 68, 763, 1031, 1049, 1345, 1653, 1696, 1723
SsiI CCGC 3 cut(s) 279, 465, 1360
SspI AATATT 1 cut(s) 615
SspMI CTAG 3 cut(s) 882, 1025, 1425
StyD4I CCNGG 2 cut(s) 91, 1004
StyI CCWWGG 2 cut(s) 257, 849
TaaI ACNGT 7 cut(s) 176, 748, 1147, 1273, 1447, 1750, 1799
TaiI ACGT 3 cut(s) 198, 580, 1113
TaqI TCGA 1 cut(s) 201
TasI AATT 8 cut(s) 68, 763, 1031, 1049, 1345, 1653, 1696, 1723
TatI WGTACW 2 cut(s) 495, 928
TfiI GAWTC 4 cut(s) 783, 1189, 1534, 1606
Tru1I TTAA 6 cut(s) 126, 386, 1052, 1107, 1385, 1644
Tru9I TTAA 6 cut(s) 126, 386, 1052, 1107, 1385, 1644
TscAI CASTG 5 cut(s) 211, 975, 1599, 1654, 1804
TseFI GTSAC 2 cut(s) 1594, 1673
TseI GCWGC 7 cut(s) 425, 462, 1198, 1364, 1511, 1514, 1517
Tsp45I GTSAC 2 cut(s) 1594, 1673
TspDTI ATGAA 5 cut(s) 338, 504, 585, 1463, 1730
TspGWI ACGGA 2 cut(s) 1033, 1513
TspRI CASTG 5 cut(s) 211, 975, 1599, 1654, 1804
VpaK11BI GGWCC 2 cut(s) 398, 846
XapI RAATTY 3 cut(s) 763, 1696, 1723
XceI RCATGY 3 cut(s) 548, 823, 982
XcmI CCANNNNNNNNNTGG 1 cut(s) 99
XmiI GTMKAC 1 cut(s) 1171
XmnI GAANNNNTTC 1 cut(s) 15
XspI CTAG 3 cut(s) 882, 1025, 1425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.