Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008744.1

Orthogroup ID

OG0005663

Physical Location & Seq

Genomic Coordinates Forward (+)

547 .. 11972

Gene Structure 11426 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008744.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2880 bp

atgagttgttcagttgcaagacttactgcatatgactataggagaacatggttgcgaaggttatcaagcggtgacatggttttgggattggttgtagctaatgttgctgtttttcttttatggaggatagcagaccctatattcatgtacaagaattttactatctcattaaacaattttacaagtggacgtcttcacacattgataacttctgcatttagtcacgttgatatttggcatatcatttctaacatgattggactgtatttttttgggatcaatattggaagaacttttgggcctgagtttttgctgaagttgtatctagctggagctattggtggctcagtcttttacttggtgcaccatgccttcctggctgcatcatcgaagaatcgaccatttgggattatggacgcttccaaggccccaggattgggggcaagcggtgctgttaatgctatcatgttgcttgatatattccttcaccccacagctaccctctactttgattttataataccagttcctgccatgctgctgggaatctttctaattggaaaggatatcttaagaataatggagggaaacagtcagatctcaggatctgcacacttgggcggtgcggcagtagcagccatagcctgggcaagacttcgaaaggggcgtgcccagtccaggaaggcacctgtaccaacacgccaccatacgcgccgctccgccaccgatgtcggacctcgaccatctgcgagccatctccgccgtcgaaccaccggccaaggctacccacccactccaccgcctcaacctcacacagcctcactccggatatcagaaccaaaccggaccgacctccgatcccaaccggtcccagccaacctgtccttccgcctcccatctccgatctcccacctacccatggtagcttcgccgtcactcccactgcagcgtcatagatccaaacaacatcgatcccacctagcagccaccaacctgatccacgttcagccgcctcctgcacatgagcacgatgagaaaaacaacttcccaaccccagccactgagcatcaagcatgcgaacaaaccagaccacccgtccggccgcacgcacggtgcactggcgaggccagtgcccagcgccagcgccgaggcacagccggacaggcaagaaggaccacgcggctctcaagaaacaaaaatgaggtgggaaaggctccatcttcaacctcatcaacaccaagctcaagaaggagtgttggttcagaatgggaaaccaaaatgaggtgggaaaggctccatcttcaacctcatcaacaccaagctcaagaaggagtgttggttcagaatggggtacatggcccagggaagaggtggggccacacctgcaacgccattagagaagggaggttcctctttgtcttcggtggttatggcagagataactgtcagaccaaccaagttcacgtctttgacactgttgcgcatacatggagccagccagtgataaaaggcacaccaccaactccaagggacagccacagttgcaccactgttggtgataatctgtttgtatttggaggcacagatgggacaaaccctcttaaggatttgcacatactcgacactgcttcacatacatggatatctccaagtttaagaggtgaggggccagaagctcgtgaaggccatagtgcagcactcgttgggaggcgcctatttgtctttggtggctgtggaaaatcggcaaataatgatgaagtctactacaatgatctgtacatcttgaatacagaaacttttgcatggaagaaagctataacatcgggcccaccaccatctcctcgcgacagccatacttgctcatcttcaaagaacaaagtgattgtgattggtggtgaagatgggcatgattactatttgtctgatgtccatattcttgatgcagatactctagtgtggagggagctgaacacttctggccaatccttgccaccccgaggtggtcactctactgttgcttttggaaagaacttatttgttttcgggggattcacagacgcacaaagtctatacaataaggaatttgtggatactggcgtatggacaaaggttatcactacaggtgacggaccttctgctagattttctgttgctggggactgtttggatcctgcgaaaggaggtgttcttgtgtttattggtggttgcaataaaagtcttgaagcactggatgatatgtattacttgaacacaggacttgtcagagagagtgaaaggaggcttgaaaaattatcattgaggaagcaattaaagctaaagtgccaagaacaaaatctcactccagttcatgacagagctcttgttccagttggaactggtgctgaaattttccagcccacaacagtgccattttatggccaacccggtgaacaaattatcccattgaatcaatctgcatctgcgaggaggtcatttcaagcaaaggttactgaaaggctgtttgatggatacacaattgaaactgttattgatggaaagcctcttcgtggtgtattgttttccaacaagtcagagtttagtattcccgctgctcctaattccagtaggaagcgggcggccagtgaggctgttgggataatgtcaaatggtggttgtaacagcaagtcaaaagattctaaaggcatcagccaagaggcaatagatctcagtgagtcagtcaatgctcatgccaaggactccgcatcacatgagattgctcgtggacaggttactgataaccctgtgcagttggttaatcctttgaatcaaggagatacttcaacaagtaatactctgcaatcaaacaccgaaggtctaggaaatgacagaaccaaggtatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kelch_4 Kelch_5

Protein Analysis

959

Amino Acids

104.74

Weight (kDa)

9.6

Isoelectric Point (pI)

49.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005663)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18610 AT1G18610 AT1G74150 AT1G74150 AT1G74150 AT1G74150 AT1G74150 AT1G74150
fragaria_vesca	FvH4_5g13650 FvH4_5g13650 FvH4_5g13650 FvH4_5g13650
malus_domestica	MD06G1203300.v1.1 MD14G1213900.v1.1
prunus_persica	Prupe.5G207100_v2.0.a1
pyrus_communis	pycom06g18120 pycom14g17730
rosa_chinensis	RchiOBHm_Chr7g0183311
rosa_laevigata	RLG00000005058
rosa_multiflora	Rmu_sc0008744.1_g000001 Rmu_sc0037281.1_g000001
rosa_roxburghii	Rroxscaffold_3G00270580
rosa_rugosa	Rorug06G0456400
rosa_samantha	Rh7AG058000 Rh7BG057800 Rh7CG059400 Rh7DG057600
rosa_wichuraiana	Rw7G004760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	518
AarI	CACCTGC	1 cut(s)	1391
AatII	GACGTC	1 cut(s)	193
Acc16I	TGCGCA	1 cut(s)	1482
Acc36I	ACCTGC	1 cut(s)	1391
AccB1I	GGYRCC	2 cut(s)	685, 1710
AccB7I	CCANNNNNTGG	2 cut(s)	645, 2414
AccBSI	CCGCTC	1 cut(s)	717
AccI	GTMKAC	1 cut(s)	1761
AccII	CGCG	3 cut(s)	712, 1180, 1845
AccIII	TCCGGA	1 cut(s)	825
AclWI	GGATC	8 cut(s)	284, 613, 852, 951, 966, 991, 2162, 2175
AcoI	YGGCCR	5 cut(s)	775, 1100, 1978, 2416, 2616
AcsI	RAATTY	3 cut(s)	154, 2081, 2385
AcuI	CTGAAG	1 cut(s)	335
AcyI	GRCGYC	2 cut(s)	190, 1711
AfaI	GTAC	4 cut(s)	149, 693, 1353, 1778
AflII	CTTAAG	2 cut(s)	571, 1601
AgeI	ACCGGT	1 cut(s)	865
AhdI	GACNNNNNGTC	1 cut(s)	1094
AjiI	CACGTC	1 cut(s)	1465
AjnI	CCWGG	5 cut(s)	375, 430, 644, 677, 1360
AjuI	GAANNNNNNNTTGG	2 cut(s)	869, 901
AleI	CACNNNNGTG	1 cut(s)	2402
AloI	GAACNNNNNNTCC	6 cut(s)	1243, 1275, 1323, 1355, 2421, 2453
Alw21I	GWGCWC	4 cut(s)	366, 1029, 1118, 2359
Alw44I	GTGCAC	2 cut(s)	362, 1114
AlwI	GGATC	8 cut(s)	284, 613, 852, 951, 966, 991, 2162, 2175
AlwNI	CAGNNNCTG	3 cut(s)	530, 608, 1061
Ama87I	CYCGRG	1 cut(s)	1995
Aor13HI	TCCGGA	1 cut(s)	825
ApaI	GGGCCC	1 cut(s)	1829
ApaLI	GTGCAC	2 cut(s)	362, 1114
ApeKI	GCWGC	7 cut(s)	380, 538, 635, 946, 983, 1694, 2588
ApoI	RAATTY	3 cut(s)	154, 2081, 2385
AsiGI	ACCGGT	1 cut(s)	865
AspLEI	GCGC	5 cut(s)	714, 1140, 1146, 1483, 1713
AsuC2I	CCSGG	1 cut(s)	2424
AsuHPI	GGTGA	7 cut(s)	83, 479, 1568, 1673, 1907, 2135, 2438
AsuII	TTCGAA	1 cut(s)	658
AvaI	CYCGRG	1 cut(s)	1995
AvaII	GGWCC	5 cut(s)	734, 846, 868, 1173, 2129
BaeGI	GKGCMC	5 cut(s)	366, 673, 1118, 1135, 1829
BaeI	ACNNNNGTAYC	4 cut(s)	1938, 1971, 2082, 2115
BalI	TGGCCA	2 cut(s)	1980, 2418
BamHI	GGATCC	1 cut(s)	2167
BanI	GGYRCC	2 cut(s)	685, 1710
BanII	GRGCYC	2 cut(s)	1829, 2359
BauI	CACGAG	2 cut(s)	1677, 2757
BbsI	GAAGAC	2 cut(s)	185, 1411
Bbv12I	GWGCWC	4 cut(s)	366, 1029, 1118, 2359
BbvI	GCAGC	7 cut(s)	367, 525, 647, 958, 995, 1706, 2575
BceAI	ACGGC	2 cut(s)	747, 916
BcgI	CGANNNNNNTGC	2 cut(s)	1112, 1146
BciT130I	CCWGG	5 cut(s)	377, 432, 646, 679, 1362
BciVI	GTATCC	2 cut(s)	2083, 2501
BcnI	CCSGG	1 cut(s)	2424
BfaI	CTAG	5 cut(s)	326, 980, 1952, 2139, 2855
BfmI	CTRYAG	3 cut(s)	37, 944, 2118
BfoI	RGCGCY	3 cut(s)	1141, 1147, 1714
BfrI	CTTAAG	2 cut(s)	571, 1601
BfuAI	ACCTGC	1 cut(s)	1391
BfuI	GTATCC	2 cut(s)	2083, 2501
BglI	GCCNNNNNGGC	3 cut(s)	377, 1163, 2624
BglII	AGATCT	2 cut(s)	597, 2701
Bme1390I	CCNGG	6 cut(s)	377, 432, 646, 679, 1362, 2424
Bme18I	GGWCC	5 cut(s)	734, 846, 868, 1173, 2129
BmeRI	GACNNNNNGTC	1 cut(s)	1094
BmeT110I	CYCGRG	1 cut(s)	1995
BmgBI	CACGTC	1 cut(s)	1465
BmrFI	CCNGG	6 cut(s)	377, 432, 646, 679, 1362, 2424
BmrI	ACTGGG	1 cut(s)	667
BmsI	GCATC	6 cut(s)	392, 1075, 1930, 2465, 2691, 2750
BmuI	ACTGGG	1 cut(s)	667
BpiI	GAAGAC	2 cut(s)	185, 1411
BpmI	CTGGAG	2 cut(s)	351, 2325
Bpu14I	TTCGAA	1 cut(s)	658
BpuEI	CTTGAG	3 cut(s)	1171, 1228, 1308
BpuMI	CCSGG	1 cut(s)	2424
Bsa29I	ATCGAT	1 cut(s)	970
BsaHI	GRCGYC	2 cut(s)	190, 1711
BsaWI	WCCGGW	3 cut(s)	825, 843, 865
BsaXI	ACNNNNNCTCC	4 cut(s)	1243, 1273, 1323, 1353
Bse118I	RCCGGY	2 cut(s)	773, 865
BseAI	TCCGGA	1 cut(s)	825
BseBI	CCWGG	5 cut(s)	377, 432, 646, 679, 1362
BseCI	ATCGAT	1 cut(s)	970
BseGI	GGATG	1 cut(s)	2236
BseMII	CTCAG	5 cut(s)	294, 360, 615, 1053, 2719
BseRI	GAGGAG	2 cut(s)	1830, 2479
BseSI	GKGCMC	5 cut(s)	366, 673, 1118, 1135, 1829
BseX3I	CGGCCG	1 cut(s)	1100
BseXI	GCAGC	7 cut(s)	367, 525, 647, 958, 995, 1706, 2575
BseYI	CCCAGC	5 cut(s)	541, 871, 1054, 1134, 2153
BsgI	GTGCAG	4 cut(s)	594, 1002, 1713, 2804
Bsh1236I	CGCG	3 cut(s)	712, 1180, 1845
Bsh1285I	CGRYCG	1 cut(s)	1103
BshNI	GGYRCC	2 cut(s)	685, 1710
BshTI	ACCGGT	1 cut(s)	865
BshVI	ATCGAT	1 cut(s)	970
BsiEI	CGRYCG	1 cut(s)	1103
BsiHKAI	GWGCWC	4 cut(s)	366, 1029, 1118, 2359
BsiHKCI	CYCGRG	1 cut(s)	1995
BsiSI	CCGG	7 cut(s)	774, 826, 844, 866, 1099, 1158, 2424
BslFI	GGGAC	4 cut(s)	854, 1544, 1603, 2171
BsmFI	GGGAC	4 cut(s)	854, 1544, 1603, 2171
BsoBI	CYCGRG	1 cut(s)	1995
Bsp119I	TTCGAA	1 cut(s)	658
Bsp120I	GGGCCC	1 cut(s)	1825
Bsp1286I	GDGCHC	7 cut(s)	366, 673, 1029, 1118, 1135, 1829, 2359
Bsp13I	TCCGGA	1 cut(s)	825
Bsp1407I	TGTACA	2 cut(s)	147, 1776
Bsp19I	CCATGG	1 cut(s)	918
Bsp68I	TCGCGA	1 cut(s)	1845
BspCNI	CTCAG	5 cut(s)	295, 359, 614, 1054, 2718
BspDI	ATCGAT	1 cut(s)	970
BspEI	TCCGGA	1 cut(s)	825
BspFNI	CGCG	3 cut(s)	712, 1180, 1845
BspHI	TCATGA	1 cut(s)	2347
BspMAI	CTGCAG	1 cut(s)	948
BspMI	ACCTGC	1 cut(s)	1391
BspPI	GGATC	8 cut(s)	284, 613, 852, 951, 966, 991, 2162, 2175
BspT104I	TTCGAA	1 cut(s)	658
BspT107I	GGYRCC	2 cut(s)	685, 1710
BspTI	CTTAAG	2 cut(s)	571, 1601
BsrBI	CCGCTC	1 cut(s)	717
BsrFI	RCCGGY	2 cut(s)	773, 865
BsrGI	TGTACA	2 cut(s)	147, 1776
BssAI	RCCGGY	2 cut(s)	773, 865
BssNI	GRCGYC	2 cut(s)	190, 1711
BssSI	CACGAG	2 cut(s)	1677, 2757
BssT1I	CCWWGG	6 cut(s)	423, 778, 918, 1526, 2730, 2871
Bst2BI	CACGAG	2 cut(s)	1677, 2757
Bst2UI	CCWGG	5 cut(s)	377, 432, 646, 679, 1362
Bst6I	CTCTTC	2 cut(s)	1361, 2547
BstACI	GRCGYC	2 cut(s)	190, 1711
BstAFI	CTTAAG	2 cut(s)	571, 1601
BstAPI	GCANNNNNTGC	1 cut(s)	449
BstAUI	TGTACA	2 cut(s)	147, 1776
BstBI	TTCGAA	1 cut(s)	658
BstC8I	GCNNGC	8 cut(s)	445, 669, 751, 1075, 1107, 1142, 1496, 2613
BstDEI	CTNAG	5 cut(s)	303, 346, 601, 1062, 2705
BstDSI	CCRYGG	1 cut(s)	918
BstENI	CCTNNNNNAGG	1 cut(s)	2175
BstF5I	GGATG	1 cut(s)	2236
BstFNI	CGCG	3 cut(s)	712, 1180, 1845
BstH2I	RGCGCY	3 cut(s)	1141, 1147, 1714
BstHHI	GCGC	5 cut(s)	714, 1140, 1146, 1483, 1713
BstMCI	CGRYCG	1 cut(s)	1103
BstNI	CCWGG	5 cut(s)	377, 432, 646, 679, 1362
BstNSI	RCATGY	1 cut(s)	1077
BstSCI	CCNGG	6 cut(s)	375, 430, 644, 677, 1360, 2422
BstSFI	CTRYAG	3 cut(s)	37, 944, 2118
BstSLI	GKGCMC	5 cut(s)	366, 673, 1118, 1135, 1829
BstUI	CGCG	3 cut(s)	712, 1180, 1845
BstV1I	GCAGC	7 cut(s)	367, 525, 647, 958, 995, 1706, 2575
BstV2I	GAAGAC	2 cut(s)	185, 1411
BstX2I	RGATCY	5 cut(s)	597, 605, 956, 2167, 2701
BstXI	CCANNNNNNTGG	1 cut(s)	541
BstYI	RGATCY	5 cut(s)	597, 605, 956, 2167, 2701
BstZI	CGGCCG	1 cut(s)	1100
Bsu15I	ATCGAT	1 cut(s)	970
BsuI	GTATCC	2 cut(s)	2083, 2501
BsuTUI	ATCGAT	1 cut(s)	970
BtgI	CCRYGG	1 cut(s)	918
BtrI	CACGTC	1 cut(s)	1465
BtsCI	GGATG	1 cut(s)	2236
BtsI	GCAGTG	2 cut(s)	941, 1623
BtuMI	TCGCGA	1 cut(s)	1845
BveI	ACCTGC	1 cut(s)	1391
Cac8I	GCNNGC	8 cut(s)	445, 669, 751, 1075, 1107, 1142, 1496, 2613
CaiI	CAGNNNCTG	3 cut(s)	530, 608, 1061
CciI	TCATGA	1 cut(s)	2347
CfoI	GCGC	5 cut(s)	714, 1140, 1146, 1483, 1713
Cfr10I	RCCGGY	2 cut(s)	773, 865
ClaI	ATCGAT	1 cut(s)	970
CpoI	CGGWCCG	1 cut(s)	846
CseI	GACGC	3 cut(s)	425, 938, 2066
Csp6I	GTAC	4 cut(s)	148, 692, 1352, 1777
CspAI	ACCGGT	1 cut(s)	865
CspI	CGGWCCG	1 cut(s)	846
CviQI	GTAC	4 cut(s)	148, 692, 1352, 1777
DdeI	CTNAG	5 cut(s)	303, 346, 601, 1062, 2705
DinI	GGCGCC	1 cut(s)	1712
DriI	GACNNNNNGTC	1 cut(s)	1094
EaeI	YGGCCR	5 cut(s)	775, 1100, 1978, 2416, 2616
EagI	CGGCCG	1 cut(s)	1100
Eam1104I	CTCTTC	2 cut(s)	1361, 2547
Eam1105I	GACNNNNNGTC	1 cut(s)	1094
EarI	CTCTTC	2 cut(s)	1361, 2547
EciI	GGCGGA	3 cut(s)	709, 749, 878
Ecl136II	GAGCTC	1 cut(s)	2357
EclXI	CGGCCG	1 cut(s)	1100
Eco130I	CCWWGG	6 cut(s)	423, 778, 918, 1526, 2730, 2871
Eco24I	GRGCYC	2 cut(s)	1829, 2359
Eco32I	GATATC	3 cut(s)	568, 831, 1644
Eco47I	GGWCC	5 cut(s)	734, 846, 868, 1173, 2129
Eco52I	CGGCCG	1 cut(s)	1100
Eco53kI	GAGCTC	1 cut(s)	2357
Eco57I	CTGAAG	1 cut(s)	335
Eco88I	CYCGRG	1 cut(s)	1995
EcoICRI	GAGCTC	1 cut(s)	2357
EcoNI	CCTNNNNNAGG	1 cut(s)	2175
EcoO109I	RGGNCCY	1 cut(s)	427
EcoRII	CCWGG	5 cut(s)	375, 430, 644, 677, 1360
EcoRV	GATATC	3 cut(s)	568, 831, 1644
EcoT14I	CCWWGG	6 cut(s)	423, 778, 918, 1526, 2730, 2871
EcoT38I	GRGCYC	2 cut(s)	1829, 2359
EgeI	GGCGCC	1 cut(s)	1712
EheI	GGCGCC	1 cut(s)	1712
ErhI	CCWWGG	6 cut(s)	423, 778, 918, 1526, 2730, 2871
FalI	AAGNNNNNCTT	2 cut(s)	554, 586
FaqI	GGGAC	4 cut(s)	854, 1544, 1603, 2171
FauI	CCCGC	2 cut(s)	2593, 2604
FauNDI	CATATG	1 cut(s)	31
FblI	GTMKAC	1 cut(s)	1761
FokI	GGATG	1 cut(s)	2243
FriOI	GRGCYC	2 cut(s)	1829, 2359
FspBI	CTAG	5 cut(s)	326, 980, 1952, 2139, 2855
FspI	TGCGCA	1 cut(s)	1482
GlaI	GCGC	5 cut(s)	713, 1139, 1145, 1482, 1712
GsaI	CCCAGC	5 cut(s)	545, 875, 1058, 1138, 2157
GsuI	CTGGAG	2 cut(s)	351, 2325
HaeII	RGCGCY	3 cut(s)	1141, 1147, 1714
HapII	CCGG	7 cut(s)	774, 826, 844, 866, 1099, 1158, 2424
HgaI	GACGC	3 cut(s)	425, 938, 2066
HhaI	GCGC	5 cut(s)	714, 1140, 1146, 1483, 1713
Hin1I	GRCGYC	2 cut(s)	190, 1711
Hin6I	GCGC	5 cut(s)	712, 1138, 1144, 1481, 1711
HinP1I	GCGC	5 cut(s)	712, 1138, 1144, 1481, 1711
HinfI	GANTC	8 cut(s)	394, 546, 2049, 2446, 2672, 2711, 2735, 2803
HpaII	CCGG	7 cut(s)	774, 826, 844, 866, 1099, 1158, 2424
HphI	GGTGA	7 cut(s)	83, 479, 1568, 1673, 1907, 2135, 2438
Hpy166II	GTNNAC	7 cut(s)	188, 364, 1116, 1462, 1762, 2429, 2762
Hpy8I	GTNNAC	7 cut(s)	188, 364, 1116, 1462, 1762, 2429, 2762
Hpy99I	CGWCG	1 cut(s)	768
HpyCH4IV	ACGT	4 cut(s)	190, 225, 1002, 1464
HpyF3I	CTNAG	5 cut(s)	303, 346, 601, 1062, 2705
HpySE526I	ACGT	4 cut(s)	190, 225, 1002, 1464
Hsp92I	GRCGYC	2 cut(s)	190, 1711
HspAI	GCGC	5 cut(s)	712, 1138, 1144, 1481, 1711
KasI	GGCGCC	1 cut(s)	1710
Kpn2I	TCCGGA	1 cut(s)	825
LmnI	GCTCC	7 cut(s)	332, 722, 1219, 1299, 1491, 1963, 2596
Lsp1109I	GCAGC	7 cut(s)	367, 525, 647, 958, 995, 1706, 2575
LweI	GCATC	6 cut(s)	392, 1075, 1930, 2465, 2691, 2750
MaeI	CTAG	5 cut(s)	326, 980, 1952, 2139, 2855
MaeII	ACGT	4 cut(s)	190, 225, 1002, 1464
MaeIII	GTNAC	8 cut(s)	71, 221, 933, 2003, 2123, 2485, 2654, 2767
MbiI	CCGCTC	1 cut(s)	717
MfeI	CAATTG	1 cut(s)	2514
MflI	RGATCY	5 cut(s)	597, 605, 956, 2167, 2701
MhlI	GDGCHC	7 cut(s)	366, 673, 1029, 1118, 1135, 1829, 2359
MlsI	TGGCCA	2 cut(s)	1980, 2418
MluNI	TGGCCA	2 cut(s)	1980, 2418
Mly113I	GGCGCC	1 cut(s)	1711
MlyI	GAGTC	2 cut(s)	2720, 2729
MmeI	TCCRAC	3 cut(s)	712, 2350, 2586
Mox20I	TGGCCA	2 cut(s)	1980, 2418
MroI	TCCGGA	1 cut(s)	825
MscI	TGGCCA	2 cut(s)	1980, 2418
MseI	TTAA	7 cut(s)	170, 456, 572, 1602, 1655, 2309, 2793
MslI	CAYNNNNRTG	2 cut(s)	1636, 2402
Msp20I	TGGCCA	2 cut(s)	1980, 2418
MspA1I	CMGCKG	1 cut(s)	2588
MspCI	CTTAAG	2 cut(s)	571, 1601
MspI	CCGG	7 cut(s)	774, 826, 844, 866, 1099, 1158, 2424
MspR9I	CCNGG	6 cut(s)	377, 432, 646, 679, 1362, 2424
MunI	CAATTG	1 cut(s)	2514
MvaI	CCWGG	5 cut(s)	377, 432, 646, 679, 1362
MvnI	CGCG	3 cut(s)	712, 1180, 1845
NarI	GGCGCC	1 cut(s)	1711
NciI	CCSGG	1 cut(s)	2424
NcoI	CCATGG	1 cut(s)	918
NdeI	CATATG	1 cut(s)	31
NmeAIII	GCCGAG	1 cut(s)	1172
NmuCI	GTSAC	5 cut(s)	71, 221, 933, 2003, 2123
NruI	TCGCGA	1 cut(s)	1845
NsbI	TGCGCA	1 cut(s)	1482
NspI	RCATGY	1 cut(s)	1077
NspV	TTCGAA	1 cut(s)	658
OliI	CACNNNNGTG	1 cut(s)	2402
PaeI	GCATGC	1 cut(s)	1077
PagI	TCATGA	1 cut(s)	2347
PaqCI	CACCTGC	1 cut(s)	1391
PasI	CCCWGGG	1 cut(s)	1361
PcsI	WCGNNNNNNNCGW	1 cut(s)	664
PfeI	GAWTC	6 cut(s)	394, 546, 2049, 2446, 2672, 2803
PflMI	CCANNNNNTGG	2 cut(s)	645, 2414
PfoI	TCCNGGA	1 cut(s)	677
PinAI	ACCGGT	1 cut(s)	865
PleI	GAGTC	2 cut(s)	2719, 2729
PluTI	GGCGCC	1 cut(s)	1714
PpsI	GAGTC	2 cut(s)	2719, 2729
PsiI	TTATAA	1 cut(s)	518
Psp124BI	GAGCTC	1 cut(s)	2359
Psp6I	CCWGG	5 cut(s)	375, 430, 644, 677, 1360
PspFI	CCCAGC	5 cut(s)	541, 871, 1054, 1134, 2153
PspGI	CCWGG	5 cut(s)	375, 430, 644, 677, 1360
PspOMI	GGGCCC	1 cut(s)	1825
PstI	CTGCAG	1 cut(s)	948
PstNI	CAGNNNCTG	3 cut(s)	530, 608, 1061
PsuI	RGATCY	5 cut(s)	597, 605, 956, 2167, 2701
RruI	TCGCGA	1 cut(s)	1845
RsaI	GTAC	4 cut(s)	149, 693, 1353, 1778
RsaNI	GTAC	4 cut(s)	148, 692, 1352, 1777
RseI	CAYNNNNRTG	2 cut(s)	1636, 2402
Rsr2I	CGGWCCG	1 cut(s)	846
RsrII	CGGWCCG	1 cut(s)	846
SacI	GAGCTC	1 cut(s)	2359
SaqAI	TTAA	7 cut(s)	170, 456, 572, 1602, 1655, 2309, 2793
SchI	GAGTC	2 cut(s)	2720, 2729
ScrFI	CCNGG	6 cut(s)	377, 432, 646, 679, 1362, 2424
SduI	GDGCHC	7 cut(s)	366, 673, 1029, 1118, 1135, 1829, 2359
SfaNI	GCATC	6 cut(s)	392, 1075, 1930, 2465, 2691, 2750
SfcI	CTRYAG	3 cut(s)	37, 944, 2118
SfoI	GGCGCC	1 cut(s)	1712
SfuI	TTCGAA	1 cut(s)	658
SinI	GGWCC	5 cut(s)	734, 846, 868, 1173, 2129
SmiMI	CAYNNNNRTG	2 cut(s)	1636, 2402
SmlI	CTYRAG	5 cut(s)	571, 1186, 1243, 1323, 1601
SmoI	CTYRAG	5 cut(s)	571, 1186, 1243, 1323, 1601
SphI	GCATGC	1 cut(s)	1077
SspDI	GGCGCC	1 cut(s)	1710
SspI	AATATT	1 cut(s)	283
SspMI	CTAG	5 cut(s)	326, 980, 1952, 2139, 2855
SstI	GAGCTC	1 cut(s)	2359
StyD4I	CCNGG	6 cut(s)	375, 430, 644, 677, 1360, 2422
StyI	CCWWGG	6 cut(s)	423, 778, 918, 1526, 2730, 2871
TaiI	ACGT	4 cut(s)	193, 228, 1005, 1467
TaqI	TCGA	7 cut(s)	389, 397, 658, 739, 766, 970, 1620
TaqII	GACCGA	1 cut(s)	863
TatI	WGTACW	2 cut(s)	147, 1776
TauI	GCSGC	6 cut(s)	629, 717, 1012, 1105, 1183, 2618
TfiI	GAWTC	6 cut(s)	394, 546, 2049, 2446, 2672, 2803
Tru1I	TTAA	7 cut(s)	170, 456, 572, 1602, 1655, 2309, 2793
Tru9I	TTAA	7 cut(s)	170, 456, 572, 1602, 1655, 2309, 2793
TseFI	GTSAC	5 cut(s)	71, 221, 933, 2003, 2123
TseI	GCWGC	7 cut(s)	380, 538, 635, 946, 983, 1694, 2588
Tsp45I	GTSAC	5 cut(s)	71, 221, 933, 2003, 2123
TspDTI	ATGAA	3 cut(s)	133, 1770, 2336
TspGWI	ACGGA	1 cut(s)	2142
Van91I	CCANNNNNTGG	2 cut(s)	645, 2414
Vha464I	CTTAAG	2 cut(s)	571, 1601
VneI	GTGCAC	2 cut(s)	362, 1114
VpaK11BI	GGWCC	5 cut(s)	734, 846, 868, 1173, 2129
XagI	CCTNNNNNAGG	1 cut(s)	2175
XapI	RAATTY	3 cut(s)	154, 2081, 2385
XceI	RCATGY	1 cut(s)	1077
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1368
XmiI	GTMKAC	1 cut(s)	1761
XspI	CTAG	5 cut(s)	326, 980, 1952, 2139, 2855
ZraI	GACGTC	1 cut(s)	191

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.