Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0007336

Physical Location & Seq

Genomic Coordinates Forward (+)

17228642 .. 17230573

Gene Structure 1932 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G221300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGGTGACGCTGATATTTTTTTTCTCCAATTGGAACAACAAGAATCCAACTGATCGCCTTTTTGTTGTCTCTTGCCTTATCGCTGTTCTAGTTGGAATTTTGACTGTACCCTACTCTGCATTCCAATGGAGGAGAAATATCAATCTAAGTTGGATGAAAGCAATAGCCAGGTCAAAGAAAAATCCAAAGGCACGTCACAAAGTTCCTATAGCTCCTCATACTTGGGTTTTAGAATCGGTATCTTGTGGAAAGAACTTGAATTCCTGTGTATGCTTTAAGTCCAGGAGCCCTTCTCAAACTCTTGGGCCGATGACAGCTTCAGACACGGCTCACCTAAGCTGCTCTTCTAGTGCGCACAAGGATTGCAAGTGTGTATCCATGATGGGGTATGAGCATGTGATGCACCAATGGACTGTCCGTAGGAATGAGGTAACAGATCAACCTGATGAAACTTCTTTTTGCAGCTATTGTGAAGATCCATGTAGTGGGTCTTTTCTTGGTGCATCCCCAATATGGTGCTGCTTGTGGTGTCAAAGACTGGTACATGCGGATTGCCACAGCAGCATGTCCAATGAAACAGGTGATATTTGTGATTTAGGTCCATTCAGAAGCCAAACTTCCGCTGGTGGATTTTTGAGCTCCATTACTCAGGGGGCCAATGAGATAGCATCTTCAGTACGTGCAACTATTAGGAGTCAGAGCAACAAGTCCAAGCATGGAAATGAAACCTCTGTTGACACGGGAAATAGTGGTAGTACTGGGGATATGTCCACAGAAAGCACAGCTGATACTCATCAAGTTGTTAATGGTTCTCATGAAATTGAGGAAAACCGTAATGGTACTGTAAACGTGGATTTGCAGCACCAAGATGGTGATGTAGATAGGAAATTGGATTCTAAGCCTAGTTTCAAAAGGAGCTCGTCAAGCAATAAGAAGGATGAGTCTCAGGTTTTAGGGATGAAACAAAAATACGAGTTGATTGATTTGTCACCAGATGCAAGACCCTTGTTAGTTTTTATCAACAAGAGGAGTGGGGCTCAGCGTGGGAATTTACTGAGGCAAGGATTGAATATTCTTCTCAATCTTGTTCAGATTTTTGAGCTGAGCTCAACACAAGGACCAGAGGTGGGTCTTTTTTTATTCAGAAAGGTGCCGCACTTCAGATTTCTTGTTTGTGGGGGAGATGGTATTGTTGGTTGGGTTCTGATAGAAAAGCAAAACTTTGTGTCTCCTCCTCCAGTTGCTATTCTACCTGCCAGAAAAGGGATTCATCTGGCTAGAGTTTTCTCATGGGGAGGTGGTTTGGGCTCAGTGGAGAGACAAGGAGGCCTTTGCACAGTTTTGCACCACATAGAGCATGTTGCAGTAACCATTCTTGATCGTTGGAAGGTAGCAATTGTAAATCAACATTATATCCATCAAGCACGGATCAAGCAGCTCCAATCGGCAAAGTTTATGAACAACTGTCCG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 ko04070 ko04072 ko05231 map00561 map00564 map01100 map01110 map04070 map04072 map05231

Pfam Domains

Protein Families

C1_1 DAGK_acc DAGK_cat

Protein Analysis

490

Amino Acids

54.18

Weight (kDa)

8.88

Isoelectric Point (pI)

54.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007336)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07920 AT5G07920 AT5G07920
fragaria_vesca	FvH4_5g14210 FvH4_5g14210 FvH4_5g14210 FvH4_5g14210 FvH4_5g14210 FvH4_5g14210
malus_domestica	MD14G1209800.v1.1
prunus_persica	Prupe.5G203000_v2.0.a1 Prupe.5G221300_v2.0.a1
pyrus_communis	pycom06g17690 pycom14g17330
rosa_chinensis	RchiOBHm_Chr7g0182721
rosa_laevigata	RLG00000005106
rosa_multiflora	Rmu_sc0000014.1_g000036
rosa_roxburghii	Rroxscaffold_3G00271040
rosa_rugosa	Rorug06G0449500 Rorug06G0449600
rosa_samantha	Rh7AG053300 Rh7BG052900 Rh7CG054500 Rh7DG052700
rosa_wichuraiana	Rw7G004340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	354
Acc36I	ACCTGC	1 cut(s)	1261
AccB1I	GGYRCC	1 cut(s)	1150
AccB7I	CCANNNNNTGG	1 cut(s)	485
AciI	CCGC	3 cut(s)	548, 621, 1154
AclWI	GGATC	2 cut(s)	470, 1436
AcsI	RAATTY	3 cut(s)	96, 259, 1048
AcuI	CTGAAG	3 cut(s)	303, 657, 1144
AfaI	GTAC	5 cut(s)	108, 543, 678, 757, 841
AfiI	CCNNNNNNNGG	5 cut(s)	384, 485, 513, 1127, 1263
AgsI	TTSAA	3 cut(s)	259, 910, 1069
AjiI	CACGTC	1 cut(s)	194
AjnI	CCWGG	2 cut(s)	167, 281
AloI	GAACNNNNNNTCC	2 cut(s)	245, 277
Alw21I	GWGCWC	3 cut(s)	641, 920, 1109
Alw26I	GTCTC	4 cut(s)	73, 948, 1233, 1312
AlwI	GGATC	2 cut(s)	470, 1436
AoxI	GGCC	3 cut(s)	305, 654, 1327
ApeKI	GCWGC	6 cut(s)	339, 462, 519, 561, 859, 1435
ApoI	RAATTY	3 cut(s)	96, 259, 1048
AspLEI	GCGC	1 cut(s)	355
AspS9I	GGNCC	4 cut(s)	305, 599, 654, 1118
AsuHPI	GGTGA	5 cut(s)	16, 323, 593, 884, 981
AvaII	GGWCC	2 cut(s)	599, 1118
BanI	GGYRCC	1 cut(s)	1150
BanII	GRGCYC	6 cut(s)	290, 641, 920, 1039, 1109, 1310
Bbv12I	GWGCWC	3 cut(s)	641, 920, 1109
BbvI	GCAGC	6 cut(s)	326, 474, 506, 573, 871, 1447
BccI	CCATC	4 cut(s)	376, 863, 1178, 1425
BceAI	ACGGC	1 cut(s)	342
BciT130I	CCWGG	2 cut(s)	169, 283
BciVI	GTATCC	1 cut(s)	385
BcoDI	GTCTC	4 cut(s)	73, 948, 1233, 1312
BfaI	CTAG	4 cut(s)	89, 348, 903, 1278
BfmI	CTRYAG	1 cut(s)	207
BfuAI	ACCTGC	1 cut(s)	1261
BfuI	GTATCC	1 cut(s)	385
BisI	GCNGC	7 cut(s)	340, 463, 520, 562, 860, 1154, 1436
BlpI	GCTNAGC	2 cut(s)	1038, 1103
BlsI	GCNGC	7 cut(s)	341, 464, 521, 563, 861, 1155, 1437
BmcAI	AGTACT	1 cut(s)	757
Bme1390I	CCNGG	2 cut(s)	169, 283
Bme18I	GGWCC	2 cut(s)	599, 1118
BmgBI	CACGTC	1 cut(s)	194
BmgT120I	GGNCC	4 cut(s)	305, 599, 654, 1118
BmiI	GGNNCC	3 cut(s)	287, 655, 1152
BmrFI	CCNGG	2 cut(s)	169, 283
BmrI	ACTGGG	1 cut(s)	768
BmsI	GCATC	4 cut(s)	390, 512, 677, 985
BmuI	ACTGGG	1 cut(s)	768
BplI	GAGNNNNNCTC	6 cut(s)	277, 309, 1021, 1053, 1091, 1123
BpmI	CTGGAG	1 cut(s)	1221
Bpu10I	CCTNAGC	1 cut(s)	335
Bpu1102I	GCTNAGC	2 cut(s)	1038, 1103
BsaAI	YACGTR	1 cut(s)	680
BsaBI	GATNNNNATC	1 cut(s)	792
Bsc4I	CCNNNNNNNGG	5 cut(s)	384, 485, 513, 1127, 1263
Bse1I	ACTGG	3 cut(s)	543, 763, 1238
Bse8I	GATNNNNATC	1 cut(s)	792
BseBI	CCWGG	2 cut(s)	169, 283
BseGI	GGATG	4 cut(s)	159, 503, 943, 963
BseJI	GATNNNNATC	1 cut(s)	792
BseLI	CCNNNNNNNGG	5 cut(s)	384, 485, 513, 1127, 1263
BseMII	CTCAG	6 cut(s)	662, 959, 1046, 1052, 1094, 1323
BseNI	ACTGG	3 cut(s)	543, 763, 1238
BseRI	GAGGAG	5 cut(s)	145, 204, 1042, 1221, 1224
BseXI	GCAGC	6 cut(s)	326, 474, 506, 573, 871, 1447
BshFI	GGCC	3 cut(s)	307, 656, 1329
BshNI	GGYRCC	1 cut(s)	1150
BsiHKAI	GWGCWC	3 cut(s)	641, 920, 1109
BslI	CCNNNNNNNGG	5 cut(s)	384, 485, 513, 1127, 1263
BsmAI	GTCTC	4 cut(s)	73, 948, 1233, 1312
BsmI	GAATGC	1 cut(s)	119
BsnI	GGCC	3 cut(s)	307, 656, 1329
Bsp1286I	GDGCHC	6 cut(s)	290, 641, 920, 1039, 1109, 1310
Bsp143I	GATC	5 cut(s)	52, 436, 475, 1378, 1428
Bsp1720I	GCTNAGC	2 cut(s)	1038, 1103
BspACI	CCGC	3 cut(s)	548, 621, 1154
BspANI	GGCC	3 cut(s)	307, 656, 1329
BspCNI	CTCAG	6 cut(s)	661, 958, 1047, 1051, 1095, 1322
BspHI	TCATGA	1 cut(s)	814
BspLI	GGNNCC	3 cut(s)	287, 655, 1152
BspMI	ACCTGC	1 cut(s)	1261
BspPI	GGATC	2 cut(s)	470, 1436
BspQI	GCTCTTC	1 cut(s)	349
BspT107I	GGYRCC	1 cut(s)	1150
BsrI	ACTGG	3 cut(s)	543, 763, 1238
BssMI	GATC	5 cut(s)	52, 436, 475, 1378, 1428
Bst2UI	CCWGG	2 cut(s)	169, 283
Bst4CI	ACNGT	6 cut(s)	106, 415, 833, 844, 1339, 1466
Bst6I	CTCTTC	1 cut(s)	349
BstAPI	GCANNNNNTGC	1 cut(s)	400
BstBAI	YACGTR	1 cut(s)	680
BstDEI	CTNAG	9 cut(s)	146, 335, 648, 897, 945, 1038, 1055, 1103, 1309
BstF5I	GGATG	4 cut(s)	159, 503, 943, 963
BstHHI	GCGC	1 cut(s)	355
BstKTI	GATC	5 cut(s)	55, 439, 478, 1381, 1431
BstMAI	GTCTC	4 cut(s)	73, 948, 1233, 1312
BstMBI	GATC	5 cut(s)	52, 436, 475, 1378, 1428
BstMWI	GCNNNNNNNGC	3 cut(s)	400, 561, 924
BstNI	CCWGG	2 cut(s)	169, 283
BstNSI	RCATGY	4 cut(s)	398, 548, 568, 1361
BstSCI	CCNGG	2 cut(s)	167, 281
BstSFI	CTRYAG	1 cut(s)	207
BstV1I	GCAGC	6 cut(s)	326, 474, 506, 573, 871, 1447
BstX2I	RGATCY	1 cut(s)	475
BstYI	RGATCY	1 cut(s)	475
BsuI	GTATCC	1 cut(s)	385
BsuRI	GGCC	3 cut(s)	307, 656, 1329
BtrI	CACGTC	1 cut(s)	194
BtsCI	GGATG	4 cut(s)	159, 503, 943, 963
BtsIMutI	CAGTG	1 cut(s)	1317
BveI	ACCTGC	1 cut(s)	1261
CciI	TCATGA	1 cut(s)	814
CfoI	GCGC	1 cut(s)	355
Cfr13I	GGNCC	4 cut(s)	305, 599, 654, 1118
CseI	GACGC	1 cut(s)	16
Csp6I	GTAC	5 cut(s)	107, 542, 677, 756, 840
CspCI	CAANNNNNGTGG	2 cut(s)	1012, 1047
CviAII	CATG	9 cut(s)	379, 395, 480, 545, 565, 716, 815, 1290, 1358
CviQI	GTAC	5 cut(s)	107, 542, 677, 756, 840
DdeI	CTNAG	9 cut(s)	146, 335, 648, 897, 945, 1038, 1055, 1103, 1309
DpnI	GATC	5 cut(s)	54, 438, 477, 1380, 1430
DpnII	GATC	5 cut(s)	52, 436, 475, 1378, 1428
Eam1104I	CTCTTC	1 cut(s)	349
EarI	CTCTTC	1 cut(s)	349
Ecl136II	GAGCTC	3 cut(s)	639, 918, 1107
Eco147I	AGGCCT	1 cut(s)	1329
Eco24I	GRGCYC	6 cut(s)	290, 641, 920, 1039, 1109, 1310
Eco47I	GGWCC	2 cut(s)	599, 1118
Eco53kI	GAGCTC	3 cut(s)	639, 918, 1107
Eco57I	CTGAAG	3 cut(s)	303, 657, 1144
EcoICRI	GAGCTC	3 cut(s)	639, 918, 1107
EcoRI	GAATTC	1 cut(s)	259
EcoRII	CCWGG	2 cut(s)	167, 281
EcoT38I	GRGCYC	6 cut(s)	290, 641, 920, 1039, 1109, 1310
FaeI	CATG	9 cut(s)	382, 398, 483, 548, 568, 719, 818, 1293, 1361
FalI	AAGNNNNNCTT	8 cut(s)	328, 360, 601, 633, 1205, 1237, 1314, 1346
FatI	CATG	9 cut(s)	378, 394, 479, 544, 564, 715, 814, 1289, 1357
Fnu4HI	GCNGC	7 cut(s)	340, 463, 520, 562, 860, 1154, 1436
FokI	GGATG	4 cut(s)	166, 490, 950, 970
FriOI	GRGCYC	6 cut(s)	290, 641, 920, 1039, 1109, 1310
Fsp4HI	GCNGC	7 cut(s)	340, 463, 520, 562, 860, 1154, 1436
FspAI	RTGCGCAY	1 cut(s)	354
FspBI	CTAG	4 cut(s)	89, 348, 903, 1278
FspI	TGCGCA	1 cut(s)	354
GlaI	GCGC	1 cut(s)	354
GluI	GCNGC	7 cut(s)	340, 463, 520, 562, 860, 1154, 1436
GsuI	CTGGAG	1 cut(s)	1221
HaeIII	GGCC	3 cut(s)	307, 656, 1329
HgaI	GACGC	1 cut(s)	16
HhaI	GCGC	1 cut(s)	355
Hin1II	CATG	9 cut(s)	382, 398, 483, 548, 568, 719, 818, 1293, 1361
Hin6I	GCGC	1 cut(s)	353
HinP1I	GCGC	1 cut(s)	353
HincII	GTYRAC	1 cut(s)	736
HindII	GTYRAC	1 cut(s)	736
HinfI	GANTC	6 cut(s)	43, 233, 694, 893, 941, 1267
HphI	GGTGA	5 cut(s)	16, 323, 593, 884, 981
Hpy166II	GTNNAC	3 cut(s)	736, 771, 847
Hpy188I	TCNGA	7 cut(s)	322, 608, 699, 1092, 1145, 1163, 1206
Hpy188III	TCNNGA	2 cut(s)	815, 1376
Hpy8I	GTNNAC	3 cut(s)	736, 771, 847
HpyAV	CCTTC	3 cut(s)	300, 928, 1381
HpyCH4III	ACNGT	6 cut(s)	106, 415, 833, 844, 1339, 1466
HpyCH4IV	ACGT	3 cut(s)	193, 679, 849
HpyF10VI	GCNNNNNNNGC	3 cut(s)	400, 561, 924
HpyF3I	CTNAG	9 cut(s)	146, 335, 648, 897, 945, 1038, 1055, 1103, 1309
HpySE526I	ACGT	3 cut(s)	193, 679, 849
Hsp92II	CATG	9 cut(s)	382, 398, 483, 548, 568, 719, 818, 1293, 1361
HspAI	GCGC	1 cut(s)	353
Kzo9I	GATC	5 cut(s)	52, 436, 475, 1378, 1428
LguI	GCTCTTC	1 cut(s)	349
LmnI	GCTCC	5 cut(s)	217, 285, 644, 915, 1443
Lsp1109I	GCAGC	6 cut(s)	326, 474, 506, 573, 871, 1447
LweI	GCATC	4 cut(s)	390, 512, 677, 985
MaeI	CTAG	4 cut(s)	89, 348, 903, 1278
MaeII	ACGT	3 cut(s)	193, 679, 849
MaeIII	GTNAC	5 cut(s)	4, 194, 430, 987, 1366
MalI	GATC	5 cut(s)	54, 438, 477, 1380, 1430
MboI	GATC	5 cut(s)	52, 436, 475, 1378, 1428
MboII	GAAGA	4 cut(s)	336, 485, 663, 1067
MfeI	CAATTG	2 cut(s)	28, 1395
MflI	RGATCY	1 cut(s)	475
MhlI	GDGCHC	6 cut(s)	290, 641, 920, 1039, 1109, 1310
MluCI	AATT	7 cut(s)	28, 96, 259, 819, 887, 1048, 1395
MlyI	GAGTC	2 cut(s)	703, 950
MmeI	TCCRAC	4 cut(s)	71, 73, 131, 1364
MseI	TTAA	2 cut(s)	276, 804
MslI	CAYNNNNRTG	3 cut(s)	124, 720, 867
MspA1I	CMGCKG	2 cut(s)	623, 785
MspR9I	CCNGG	2 cut(s)	169, 283
MunI	CAATTG	2 cut(s)	28, 1395
Mva1269I	GAATGC	1 cut(s)	119
MvaI	CCWGG	2 cut(s)	169, 283
MwoI	GCNNNNNNNGC	3 cut(s)	400, 561, 924
NdeII	GATC	5 cut(s)	52, 436, 475, 1378, 1428
NlaIII	CATG	9 cut(s)	382, 398, 483, 548, 568, 719, 818, 1293, 1361
NlaIV	GGNNCC	3 cut(s)	287, 655, 1152
NmuCI	GTSAC	3 cut(s)	4, 194, 987
NsbI	TGCGCA	1 cut(s)	354
NspI	RCATGY	4 cut(s)	398, 548, 568, 1361
PagI	TCATGA	1 cut(s)	814
PceI	AGGCCT	1 cut(s)	1329
PciSI	GCTCTTC	1 cut(s)	349
PctI	GAATGC	1 cut(s)	119
PfeI	GAWTC	4 cut(s)	43, 233, 893, 1267
PflMI	CCANNNNNTGG	1 cut(s)	485
PfoI	TCCNGGA	1 cut(s)	281
PkrI	GCNGC	7 cut(s)	341, 464, 521, 563, 861, 1155, 1437
PleI	GAGTC	2 cut(s)	702, 949
PpsI	GAGTC	2 cut(s)	702, 949
Ppu21I	YACGTR	1 cut(s)	680
Psp124BI	GAGCTC	3 cut(s)	641, 920, 1109
Psp6I	CCWGG	2 cut(s)	167, 281
PspGI	CCWGG	2 cut(s)	167, 281
PspN4I	GGNNCC	3 cut(s)	287, 655, 1152
PspPI	GGNCC	4 cut(s)	305, 599, 654, 1118
PsuI	RGATCY	1 cut(s)	475
PvuII	CAGCTG	1 cut(s)	785
RsaI	GTAC	5 cut(s)	108, 543, 678, 757, 841
RsaNI	GTAC	5 cut(s)	107, 542, 677, 756, 840
RseI	CAYNNNNRTG	3 cut(s)	124, 720, 867
SacI	GAGCTC	3 cut(s)	641, 920, 1109
SapI	GCTCTTC	1 cut(s)	349
SaqAI	TTAA	2 cut(s)	276, 804
SatI	GCNGC	7 cut(s)	340, 463, 520, 562, 860, 1154, 1436
Sau3AI	GATC	5 cut(s)	52, 436, 475, 1378, 1428
Sau96I	GGNCC	4 cut(s)	305, 599, 654, 1118
ScaI	AGTACT	1 cut(s)	757
SchI	GAGTC	2 cut(s)	703, 950
ScrFI	CCNGG	2 cut(s)	169, 283
SduI	GDGCHC	6 cut(s)	290, 641, 920, 1039, 1109, 1310
SfaNI	GCATC	4 cut(s)	390, 512, 677, 985
SfcI	CTRYAG	1 cut(s)	207
SinI	GGWCC	2 cut(s)	599, 1118
SmiMI	CAYNNNNRTG	3 cut(s)	124, 720, 867
Sse9I	AATT	7 cut(s)	28, 96, 259, 819, 887, 1048, 1395
SseBI	AGGCCT	1 cut(s)	1329
SsiI	CCGC	3 cut(s)	548, 621, 1154
SspI	AATATT	1 cut(s)	1072
SspMI	CTAG	4 cut(s)	89, 348, 903, 1278
SstI	GAGCTC	3 cut(s)	641, 920, 1109
StuI	AGGCCT	1 cut(s)	1329
StyD4I	CCNGG	2 cut(s)	167, 281
TaaI	ACNGT	6 cut(s)	106, 415, 833, 844, 1339, 1466
TaiI	ACGT	3 cut(s)	196, 682, 852
TasI	AATT	7 cut(s)	28, 96, 259, 819, 887, 1048, 1395
TatI	WGTACW	1 cut(s)	755
TauI	GCSGC	1 cut(s)	1156
TfiI	GAWTC	4 cut(s)	43, 233, 893, 1267
Tru1I	TTAA	2 cut(s)	276, 804
Tru9I	TTAA	2 cut(s)	276, 804
TscAI	CASTG	1 cut(s)	1317
TseFI	GTSAC	3 cut(s)	4, 194, 987
TseI	GCWGC	6 cut(s)	339, 462, 519, 561, 859, 1435
Tsp45I	GTSAC	3 cut(s)	4, 194, 987
TspDTI	ATGAA	7 cut(s)	170, 462, 588, 738, 831, 974, 1259
TspGWI	ACGGA	2 cut(s)	407, 1441
TspRI	CASTG	1 cut(s)	1317
Van91I	CCANNNNNTGG	1 cut(s)	485
VpaK11BI	GGWCC	2 cut(s)	599, 1118
XapI	RAATTY	3 cut(s)	96, 259, 1048
XceI	RCATGY	4 cut(s)	398, 548, 568, 1361
XcmI	CCANNNNNNNNNTGG	1 cut(s)	620
XspI	CTAG	4 cut(s)	89, 348, 903, 1278
ZrmI	AGTACT	1 cut(s)	757

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.