Prupe.6G339700_v2.0.a1

Plant protein of unknown function (DUF868)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
29391968 .. 29392960
993 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G339700.1

Sequence Viewer

Length: 993 bp
ATGATCCCAGCATGTTTCAGCCAGCCCAACACACTCTCAAGCAGCTCTCAAGTGCCCCAAAACCTTATAACCTGCATATATCAAACTCAGCTTTGTAACTCACCCACATATCTCACTCTCACTTGGTCCAAAAACCTCTTCTCTCACTCTCTAACCATTCATGCCTCAGACTCTTTTTCCATCACCATCTCCCTCAACCCATCAACCTTCTCATTCTTCAGAACCAAACCAGGCTCCAAATCCATCTCTCTAACCCACAACCATTGCCAAAAAATCAAGCTTTACTGGGACTTCACCCGGGCTGACTTCACTCACAACTCGGCTGAGCCAGAGTCTTGCTTCTACATCGCCATTTCTTGCAATGCCAAAATTGAATTCTTTCTTGGGGATCTTTTGGACGAGTTCACTCGGCGGTCAGGGGTAGTTGTGACTCACAAACTCAGCCAACCTGCCCTGTTGTCAAGGCGGGAACATGTGTTTGGGCGCAGGAATTACATATCCAGAGCTCAGTTCTTGGGGTCAAAACATGAAATTGGAATAGAGTGTAGCGAGGGTACACTCAAAGTAAAAGTAGATGGAGTGATAAGCCTGATTGTCAAAAGGTTGGCTTGGAAATTCAGAGGCAATGAGAGAATTTTTGTTGGTGGAGTTGAATTTGAATTTTACTGGGACGTGTTCAACTGGGTTAATAATCATAACGGTGCTAATGGGAATGGTCATGGTGTATTTGTTTTTCAAGTGGGTGATGGTGGGGTGTGGCCAGAAATGGTAGGTCCTGAGAAGAGGTTGATGAGGAAGAGCTTGTCAACATCGGCTGCTTCGGCATCAATGCCGTCGATGACTTCGTTGTCCCCGTCGCCGTCATGCTCAAGTGTGTTGCAATGGGCAGAGGAGAGTAGTGATGGGGGGAGAAGTTCATGTTCTTCATCCACTAGGTCATATGGTAGTAATGGGGGGTTTTCTCTGTTGCTGTATGCTTGGAAGAGGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

331

Amino Acids

36.73

Weight (kDa)

8.94

Isoelectric Point (pI)

52.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016865)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 68
AasI GACNNNNNNGTC 1 cut(s) 847
Acc36I ACCTGC 2 cut(s) 80, 457
AciI CCGC 2 cut(s) 412, 466
AclWI GGATC 1 cut(s) 396
AcoI YGGCCR 1 cut(s) 758
AcsI RAATTY 5 cut(s) 374, 614, 633, 653, 659
AcuI CTGAAG 1 cut(s) 202
AfaI GTAC 1 cut(s) 556
AflIII ACRYGT 2 cut(s) 472, 672
AgsI TTSAA 5 cut(s) 374, 653, 659, 679, 737
AjiI CACGTC 1 cut(s) 673
AjnI CCWGG 1 cut(s) 229
AjuI GAANNNNNNNTTGG 8 cut(s) 122, 154, 359, 366, 391, 398, 462, 494
AluBI AGCT 5 cut(s) 45, 91, 280, 506, 801
AluI AGCT 5 cut(s) 45, 91, 280, 506, 801
Alw21I GWGCWC 1 cut(s) 508
AlwI GGATC 1 cut(s) 396
Ama87I CYCGRG 1 cut(s) 297
AoxI GGCC 1 cut(s) 758
ApeKI GCWGC 2 cut(s) 42, 815
ApoI RAATTY 5 cut(s) 374, 614, 633, 653, 659
Asp700I GAANNNNTTC 1 cut(s) 378
AspLEI GCGC 1 cut(s) 486
AspS9I GGNCC 2 cut(s) 126, 773
AsuC2I CCSGG 2 cut(s) 298, 299
AsuHPI GGTGA 4 cut(s) 93, 175, 286, 755
AvaI CYCGRG 1 cut(s) 297
AvaII GGWCC 2 cut(s) 126, 773
BaeGI GKGCMC 1 cut(s) 57
BalI TGGCCA 1 cut(s) 760
BanII GRGCYC 1 cut(s) 508
Bbv12I GWGCWC 1 cut(s) 508
BbvI GCAGC 2 cut(s) 54, 802
BccI CCATC 7 cut(s) 188, 194, 208, 251, 569, 740, 896
BceAI ACGGC 2 cut(s) 817, 844
BciT130I CCWGG 1 cut(s) 231
BcnI CCSGG 2 cut(s) 298, 299
BfaI CTAG 1 cut(s) 933
BfuAI ACCTGC 2 cut(s) 80, 457
BisI GCNGC 2 cut(s) 43, 816
BlpI GCTNAGC 1 cut(s) 324
BlsI GCNGC 2 cut(s) 44, 817
Bme1390I CCNGG 3 cut(s) 231, 298, 299
Bme18I GGWCC 2 cut(s) 126, 773
BmeT110I CYCGRG 1 cut(s) 297
BmgBI CACGTC 1 cut(s) 673
BmgT120I GGNCC 2 cut(s) 126, 773
BmiI GGNNCC 1 cut(s) 235
BmrFI CCNGG 3 cut(s) 231, 298, 299
BmrI ACTGGG 3 cut(s) 295, 676, 691
BmsI GCATC 1 cut(s) 833
BmuI ACTGGG 3 cut(s) 295, 676, 691
Bpu1102I GCTNAGC 1 cut(s) 324
BpuEI CTTGAG 3 cut(s) 22, 33, 853
BpuMI CCSGG 2 cut(s) 298, 299
BsaJI CCNNGG 1 cut(s) 297
Bse1I ACTGG 3 cut(s) 290, 671, 686
Bse3DI GCAATG 4 cut(s) 262, 367, 631, 887
BseBI CCWGG 1 cut(s) 231
BseDI CCNNGG 1 cut(s) 297
BseGI GGATG 1 cut(s) 926
BseMI GCAATG 4 cut(s) 262, 367, 631, 887
BseMII CTCAG 6 cut(s) 101, 180, 315, 454, 521, 768
BseNI ACTGG 3 cut(s) 290, 671, 686
BseRI GAGGAG 1 cut(s) 905
BseSI GKGCMC 1 cut(s) 57
BseXI GCAGC 2 cut(s) 54, 802
BseYI CCCAGC 1 cut(s) 7
BshFI GGCC 1 cut(s) 760
BsiHKAI GWGCWC 1 cut(s) 508
BsiHKCI CYCGRG 1 cut(s) 297
BsiSI CCGG 1 cut(s) 298
BslFI GGGAC 3 cut(s) 302, 683, 835
BsmFI GGGAC 3 cut(s) 302, 683, 835
BsnI GGCC 1 cut(s) 760
BsoBI CYCGRG 1 cut(s) 297
Bsp1286I GDGCHC 2 cut(s) 57, 508
Bsp143I GATC 2 cut(s) 3, 388
Bsp1720I GCTNAGC 1 cut(s) 324
BspACI CCGC 2 cut(s) 412, 466
BspANI GGCC 1 cut(s) 760
BspCNI CTCAG 6 cut(s) 100, 179, 316, 453, 520, 769
BspLI GGNNCC 1 cut(s) 235
BspMI ACCTGC 2 cut(s) 80, 457
BspPI GGATC 1 cut(s) 396
BspQI GCTCTTC 1 cut(s) 791
BsrDI GCAATG 4 cut(s) 262, 367, 631, 887
BsrI ACTGG 3 cut(s) 290, 671, 686
BssECI CCNNGG 1 cut(s) 297
BssMI GATC 2 cut(s) 3, 388
Bst2UI CCWGG 1 cut(s) 231
Bst4CI ACNGT 1 cut(s) 701
Bst6I CTCTTC 4 cut(s) 143, 776, 791, 977
BstC8I GCNNGC 1 cut(s) 23
BstDEI CTNAG 6 cut(s) 87, 166, 324, 440, 507, 777
BstF5I GGATG 1 cut(s) 926
BstHHI GCGC 1 cut(s) 486
BstKTI GATC 2 cut(s) 6, 391
BstMBI GATC 2 cut(s) 3, 388
BstMWI GCNNNNNNNGC 1 cut(s) 821
BstNI CCWGG 1 cut(s) 231
BstNSI RCATGY 2 cut(s) 15, 476
BstSCI CCNGG 3 cut(s) 229, 296, 297
BstSLI GKGCMC 1 cut(s) 57
BstV1I GCAGC 2 cut(s) 54, 802
BstX2I RGATCY 1 cut(s) 388
BstYI RGATCY 1 cut(s) 388
BsuRI GGCC 1 cut(s) 760
BtgZI GCGATG 1 cut(s) 331
BtrI CACGTC 1 cut(s) 673
BtsCI GGATG 1 cut(s) 926
BveI ACCTGC 2 cut(s) 80, 457
Cac8I GCNNGC 1 cut(s) 23
CfoI GCGC 1 cut(s) 486
Cfr13I GGNCC 2 cut(s) 126, 773
Cfr9I CCCGGG 1 cut(s) 297
Csp6I GTAC 1 cut(s) 555
CspCI CAANNNNNGTGG 2 cut(s) 245, 280
CviAII CATG 7 cut(s) 12, 161, 473, 527, 719, 864, 918
CviQI GTAC 1 cut(s) 555
DdeI CTNAG 6 cut(s) 87, 166, 324, 440, 507, 777
DpnI GATC 2 cut(s) 5, 390
DpnII GATC 2 cut(s) 3, 388
DrdI GACNNNNNNGTC 1 cut(s) 847
DseDI GACNNNNNNGTC 1 cut(s) 847
EaeI YGGCCR 1 cut(s) 758
Eam1104I CTCTTC 4 cut(s) 143, 776, 791, 977
EarI CTCTTC 4 cut(s) 143, 776, 791, 977
Ecl136II GAGCTC 1 cut(s) 506
Eco24I GRGCYC 1 cut(s) 508
Eco47I GGWCC 2 cut(s) 126, 773
Eco53kI GAGCTC 1 cut(s) 506
Eco57I CTGAAG 1 cut(s) 202
Eco88I CYCGRG 1 cut(s) 297
EcoICRI GAGCTC 1 cut(s) 506
EcoO109I RGGNCCY 1 cut(s) 773
EcoRI GAATTC 1 cut(s) 374
EcoRII CCWGG 1 cut(s) 229
EcoT38I GRGCYC 1 cut(s) 508
FaeI CATG 7 cut(s) 15, 164, 476, 530, 722, 867, 921
FalI AAGNNNNNCTT 2 cut(s) 592, 624
FaqI GGGAC 3 cut(s) 302, 683, 835
FatI CATG 7 cut(s) 11, 160, 472, 526, 718, 863, 917
FauI CCCGC 1 cut(s) 459
FauNDI CATATG 1 cut(s) 940
Fnu4HI GCNGC 2 cut(s) 43, 816
FokI GGATG 1 cut(s) 913
FriOI GRGCYC 1 cut(s) 508
Fsp4HI GCNGC 2 cut(s) 43, 816
FspBI CTAG 1 cut(s) 933
GlaI GCGC 1 cut(s) 485
GluI GCNGC 2 cut(s) 43, 816
GsaI CCCAGC 1 cut(s) 11
HaeIII GGCC 1 cut(s) 760
HapII CCGG 1 cut(s) 298
HhaI GCGC 1 cut(s) 486
Hin1II CATG 7 cut(s) 15, 164, 476, 530, 722, 867, 921
Hin6I GCGC 1 cut(s) 484
HinP1I GCGC 1 cut(s) 484
HincII GTYRAC 1 cut(s) 807
HindII GTYRAC 1 cut(s) 807
HindIII AAGCTT 1 cut(s) 278
HinfI GANTC 3 cut(s) 170, 332, 430
HpaII CCGG 1 cut(s) 298
HphI GGTGA 4 cut(s) 93, 175, 286, 755
Hpy166II GTNNAC 3 cut(s) 405, 557, 807
Hpy188I TCNGA 3 cut(s) 169, 221, 620
Hpy188III TCNNGA 2 cut(s) 501, 776
Hpy8I GTNNAC 3 cut(s) 405, 557, 807
Hpy99I CGWCG 2 cut(s) 838, 859
HpyAV CCTTC 1 cut(s) 217
HpyCH4III ACNGT 1 cut(s) 701
HpyCH4IV ACGT 1 cut(s) 672
HpyCH4V TGCA 3 cut(s) 75, 360, 880
HpyF10VI GCNNNNNNNGC 1 cut(s) 821
HpyF3I CTNAG 6 cut(s) 87, 166, 324, 440, 507, 777
HpySE526I ACGT 1 cut(s) 672
Hsp92II CATG 7 cut(s) 15, 164, 476, 530, 722, 867, 921
HspAI GCGC 1 cut(s) 484
Kzo9I GATC 2 cut(s) 3, 388
LguI GCTCTTC 1 cut(s) 791
LmnI GCTCC 1 cut(s) 239
Lsp1109I GCAGC 2 cut(s) 54, 802
LweI GCATC 1 cut(s) 833
MaeI CTAG 1 cut(s) 933
MaeII ACGT 1 cut(s) 672
MaeIII GTNAC 2 cut(s) 95, 427
MalI GATC 2 cut(s) 5, 390
MboI GATC 2 cut(s) 3, 388
MboII GAAGA 5 cut(s) 130, 208, 793, 808, 915
MflI RGATCY 1 cut(s) 388
MhlI GDGCHC 2 cut(s) 57, 508
MlsI TGGCCA 1 cut(s) 760
MluCI AATT 8 cut(s) 369, 374, 490, 531, 614, 633, 653, 659
MluNI TGGCCA 1 cut(s) 760
MlyI GAGTC 3 cut(s) 164, 341, 424
MnlI CCTC 9 cut(s) 146, 175, 203, 544, 614, 777, 786, 883, 978
Mox20I TGGCCA 1 cut(s) 760
MroXI GAANNNNTTC 1 cut(s) 378
MscI TGGCCA 1 cut(s) 760
MseI TTAA 1 cut(s) 687
MslI CAYNNNNRTG 1 cut(s) 699
Msp20I TGGCCA 1 cut(s) 760
MspI CCGG 1 cut(s) 298
MspR9I CCNGG 3 cut(s) 231, 298, 299
MvaI CCWGG 1 cut(s) 231
MwoI GCNNNNNNNGC 1 cut(s) 821
NciI CCSGG 2 cut(s) 298, 299
NdeI CATATG 1 cut(s) 940
NdeII GATC 2 cut(s) 3, 388
NlaIII CATG 7 cut(s) 15, 164, 476, 530, 722, 867, 921
NlaIV GGNNCC 1 cut(s) 235
NmeAIII GCCGAG 2 cut(s) 299, 388
NmuCI GTSAC 1 cut(s) 427
NspI RCATGY 2 cut(s) 15, 476
PciI ACATGT 1 cut(s) 472
PciSI GCTCTTC 1 cut(s) 791
PcsI WCGNNNNNNNCGW 2 cut(s) 842, 851
PdmI GAANNNNTTC 1 cut(s) 378
PkrI GCNGC 2 cut(s) 44, 817
PleI GAGTC 3 cut(s) 164, 340, 424
PpsI GAGTC 3 cut(s) 164, 340, 424
PpuMI RGGWCCY 1 cut(s) 773
PscI ACATGT 1 cut(s) 472
PsiI TTATAA 1 cut(s) 68
Psp124BI GAGCTC 1 cut(s) 508
Psp5II RGGWCCY 1 cut(s) 773
Psp6I CCWGG 1 cut(s) 229
PspFI CCCAGC 1 cut(s) 7
PspGI CCWGG 1 cut(s) 229
PspN4I GGNNCC 1 cut(s) 235
PspPI GGNCC 2 cut(s) 126, 773
PspPPI RGGWCCY 1 cut(s) 773
PsuI RGATCY 1 cut(s) 388
RsaI GTAC 1 cut(s) 556
RsaNI GTAC 1 cut(s) 555
RseI CAYNNNNRTG 1 cut(s) 699
SacI GAGCTC 1 cut(s) 508
SapI GCTCTTC 1 cut(s) 791
SaqAI TTAA 1 cut(s) 687
SatI GCNGC 2 cut(s) 43, 816
Sau3AI GATC 2 cut(s) 3, 388
Sau96I GGNCC 2 cut(s) 126, 773
SchI GAGTC 3 cut(s) 164, 341, 424
ScrFI CCNGG 3 cut(s) 231, 298, 299
SduI GDGCHC 2 cut(s) 57, 508
SfaNI GCATC 1 cut(s) 833
SinI GGWCC 2 cut(s) 126, 773
SmaI CCCGGG 1 cut(s) 299
SmiMI CAYNNNNRTG 1 cut(s) 699
SmlI CTYRAG 3 cut(s) 37, 48, 868
SmoI CTYRAG 3 cut(s) 37, 48, 868
Sse9I AATT 8 cut(s) 369, 374, 490, 531, 614, 633, 653, 659
SsiI CCGC 2 cut(s) 412, 466
SspMI CTAG 1 cut(s) 933
SstI GAGCTC 1 cut(s) 508
StyD4I CCNGG 3 cut(s) 229, 296, 297
TaaI ACNGT 1 cut(s) 701
TaiI ACGT 1 cut(s) 675
TaqI TCGA 1 cut(s) 836
TasI AATT 8 cut(s) 369, 374, 490, 531, 614, 633, 653, 659
Tru1I TTAA 1 cut(s) 687
Tru9I TTAA 1 cut(s) 687
TseFI GTSAC 1 cut(s) 427
TseI GCWGC 2 cut(s) 42, 815
Tsp45I GTSAC 1 cut(s) 427
TspDTI ATGAA 4 cut(s) 149, 543, 906, 915
TspMI CCCGGG 1 cut(s) 297
VpaK11BI GGWCC 2 cut(s) 126, 773
XapI RAATTY 5 cut(s) 374, 614, 633, 653, 659
XceI RCATGY 2 cut(s) 15, 476
XmaI CCCGGG 1 cut(s) 297
XmnI GAANNNNTTC 1 cut(s) 378
XspI CTAG 1 cut(s) 933
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.