Prupe.7G015800_v2.0.a1
ERF Family

DnaJ Hsp40 cysteine-rich domain superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0014243
Physical Location & Seq
Forward (+)
2277584 .. 2280153
2570 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G015800.1

Sequence Viewer

Length: 510 bp
ATGGGTTCTACTGCTGCTGCTGCTGCTGTGAATATGGCGTCGTTGATTACTGCCATCCCTGTTTCTTCGACAAAATTGAATTTCAATGACAAATTTACATCTGCGTTTCATTTCGAACGAGCTAGGGCCATCACCAAAATCACTGCCATCTCTCCCAACGGCTCTGCTTCTCGTTCTTCTTCACATGGGGCTGAGTGCTCGGCTGGGGATGTGGATAAACGAAGAAATAGTCTTGAATCTCTGTTTTGTTATGATATGGCCGTACCAGAAGAGAGAATTGAGAAGCCTATTGGGATATCTTTGGCCGAGAAAGTCATTGGAAATAAGCCCCGATGCATTGATTGTGAAGCCAAAGGTGCCATCCTTTGCACCACTTGTTCTGGTTCAGGCCTGTATGTTGATTCAATATTGGAGAGCCAGGGCATTATTGTCAAAGTCCGCTGCCTAGGTTGTGGGGGAACCGGTAACATTATGTGTTCAGAATGCGGTGGCCGTGGCCATTTAGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

170

Amino Acids

17.58

Weight (kDa)

8.04

Isoelectric Point (pI)

43.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014243)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G17840
fragaria_vesca FvH4_1g29880
malus_domestica MD12G1011900.v1.1 MD14G1009500.v1.1
prunus_persica Prupe.7G015800_v2.0.a1
pyrus_communis pycom12g00920
rosa_chinensis RchiOBHm_Chr3g0496031
rosa_laevigata RLG00000022571
rosa_multiflora Rmu_sc0000607.1_g000055 Rmu_sc0005781.1_g000028
rosa_roxburghii Rroxscaffold_6G00389640
rosa_rugosa Rorug03G0279200
rosa_samantha Rh3AG325900 Rh3BG362300 Rh3CG358300 Rh3DG361700
rosa_wichuraiana Rw3G028530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 356
AciI CCGC 2 cut(s) 439, 486
AcoI YGGCCR 4 cut(s) 258, 303, 490, 496
AcsI RAATTY 2 cut(s) 79, 92
AcyI GRCGYC 1 cut(s) 38
AfaI GTAC 1 cut(s) 264
AgeI ACCGGT 1 cut(s) 461
AgsI TTSAA 4 cut(s) 79, 85, 236, 405
AjnI CCWGG 1 cut(s) 417
AluBI AGCT 1 cut(s) 122
AluI AGCT 1 cut(s) 122
Alw21I GWGCWC 1 cut(s) 200
AoxI GGCC 6 cut(s) 126, 258, 303, 388, 490, 496
ApeKI GCWGC 5 cut(s) 14, 17, 20, 23, 441
ApoI RAATTY 2 cut(s) 79, 92
ArsI GACNNNNNNTTYG 2 cut(s) 214, 246
AsiGI ACCGGT 1 cut(s) 461
AspA2I CCTAGG 1 cut(s) 445
AspS9I GGNCC 1 cut(s) 126
AsuHPI GGTGA 1 cut(s) 124
AsuII TTCGAA 1 cut(s) 114
AvrII CCTAGG 1 cut(s) 445
BalI TGGCCA 1 cut(s) 498
BanI GGYRCC 1 cut(s) 356
Bbv12I GWGCWC 1 cut(s) 200
BbvI GCAGC 4 cut(s) 4, 7, 10, 428
BccI CCATC 4 cut(s) 62, 137, 155, 368
BceAI ACGGC 3 cut(s) 175, 245, 477
BciT130I CCWGG 1 cut(s) 419
BfaI CTAG 2 cut(s) 123, 446
BisI GCNGC 5 cut(s) 15, 18, 21, 24, 442
BlnI CCTAGG 1 cut(s) 445
BlsI GCNGC 5 cut(s) 16, 19, 22, 25, 443
Bme1390I CCNGG 1 cut(s) 419
BmgT120I GGNCC 1 cut(s) 126
BmiI GGNNCC 2 cut(s) 358, 460
BmrFI CCNGG 1 cut(s) 419
BmsI GCATC 1 cut(s) 323
Bpu14I TTCGAA 1 cut(s) 114
BsaHI GRCGYC 1 cut(s) 38
BsaJI CCNNGG 3 cut(s) 418, 445, 493
BsaWI WCCGGW 1 cut(s) 461
Bse118I RCCGGY 1 cut(s) 461
BseBI CCWGG 1 cut(s) 419
BseDI CCNNGG 3 cut(s) 418, 445, 493
BseGI GGATG 3 cut(s) 54, 214, 360
BseMII CTCAG 1 cut(s) 183
BseXI GCAGC 4 cut(s) 4, 7, 10, 428
BseYI CCCAGC 1 cut(s) 203
BshFI GGCC 6 cut(s) 128, 260, 305, 390, 492, 498
BshNI GGYRCC 1 cut(s) 356
BshTI ACCGGT 1 cut(s) 461
BsiHKAI GWGCWC 1 cut(s) 200
BsiSI CCGG 1 cut(s) 462
BsmI GAATGC 1 cut(s) 488
BsnI GGCC 6 cut(s) 128, 260, 305, 390, 492, 498
Bsp119I TTCGAA 1 cut(s) 114
Bsp1286I GDGCHC 1 cut(s) 200
BspACI CCGC 2 cut(s) 439, 486
BspANI GGCC 6 cut(s) 128, 260, 305, 390, 492, 498
BspCNI CTCAG 1 cut(s) 184
BspLI GGNNCC 2 cut(s) 358, 460
BspT104I TTCGAA 1 cut(s) 114
BspT107I GGYRCC 1 cut(s) 356
BsrFI RCCGGY 1 cut(s) 461
BssAI RCCGGY 1 cut(s) 461
BssECI CCNNGG 3 cut(s) 418, 445, 493
BssNI GRCGYC 1 cut(s) 38
BssT1I CCWWGG 1 cut(s) 445
Bst2UI CCWGG 1 cut(s) 419
Bst6I CTCTTC 1 cut(s) 264
BstACI GRCGYC 1 cut(s) 38
BstBI TTCGAA 1 cut(s) 114
BstDEI CTNAG 1 cut(s) 192
BstDSI CCRYGG 1 cut(s) 493
BstF5I GGATG 3 cut(s) 54, 214, 360
BstMWI GCNNNNNNNGC 3 cut(s) 20, 23, 356
BstNI CCWGG 1 cut(s) 419
BstSCI CCNGG 1 cut(s) 417
BstV1I GCAGC 4 cut(s) 4, 7, 10, 428
BsuRI GGCC 6 cut(s) 128, 260, 305, 390, 492, 498
BtgI CCRYGG 1 cut(s) 493
BtsCI GGATG 3 cut(s) 54, 214, 360
BtsI GCAGTG 1 cut(s) 141
BtsIMutI CAGTG 1 cut(s) 141
Cfr10I RCCGGY 1 cut(s) 461
Cfr13I GGNCC 1 cut(s) 126
CseI GACGC 1 cut(s) 27
Csp6I GTAC 1 cut(s) 263
CspAI ACCGGT 1 cut(s) 461
CviAII CATG 1 cut(s) 185
CviQI GTAC 1 cut(s) 263
DdeI CTNAG 1 cut(s) 192
EaeI YGGCCR 4 cut(s) 258, 303, 490, 496
Eam1104I CTCTTC 1 cut(s) 264
EarI CTCTTC 1 cut(s) 264
Eco130I CCWWGG 1 cut(s) 445
Eco147I AGGCCT 1 cut(s) 390
Eco32I GATATC 1 cut(s) 297
EcoRII CCWGG 1 cut(s) 417
EcoRV GATATC 1 cut(s) 297
EcoT14I CCWWGG 1 cut(s) 445
EcoT22I ATGCAT 1 cut(s) 338
ErhI CCWWGG 1 cut(s) 445
FaeI CATG 1 cut(s) 188
FaiI YATR 6 cut(s) 35, 186, 252, 257, 396, 473
FatI CATG 1 cut(s) 184
Fnu4HI GCNGC 5 cut(s) 15, 18, 21, 24, 442
FokI GGATG 3 cut(s) 41, 221, 347
Fsp4HI GCNGC 5 cut(s) 15, 18, 21, 24, 442
FspBI CTAG 2 cut(s) 123, 446
GluI GCNGC 5 cut(s) 15, 18, 21, 24, 442
GsaI CCCAGC 1 cut(s) 207
HaeIII GGCC 6 cut(s) 128, 260, 305, 390, 492, 498
HapII CCGG 1 cut(s) 462
HgaI GACGC 1 cut(s) 27
Hin1I GRCGYC 1 cut(s) 38
Hin1II CATG 1 cut(s) 188
HinfI GANTC 2 cut(s) 236, 401
HpaII CCGG 1 cut(s) 462
HphI GGTGA 1 cut(s) 124
Hpy188I TCNGA 1 cut(s) 481
Hpy188III TCNNGA 1 cut(s) 233
Hpy99I CGWCG 1 cut(s) 43
HpyCH4V TGCA 2 cut(s) 336, 369
HpyF10VI GCNNNNNNNGC 3 cut(s) 20, 23, 356
HpyF3I CTNAG 1 cut(s) 192
Hsp92I GRCGYC 1 cut(s) 38
Hsp92II CATG 1 cut(s) 188
LpnPI CCDG 9 cut(s) 72, 189, 279, 366, 372, 404, 404, 431, 475
Lsp1109I GCAGC 4 cut(s) 4, 7, 10, 428
LweI GCATC 1 cut(s) 323
MaeI CTAG 2 cut(s) 123, 446
MaeIII GTNAC 1 cut(s) 464
MboII GAAGA 5 cut(s) 57, 168, 171, 234, 281
MhlI GDGCHC 1 cut(s) 200
MlsI TGGCCA 1 cut(s) 498
MluCI AATT 4 cut(s) 74, 79, 92, 276
MluNI TGGCCA 1 cut(s) 498
Mox20I TGGCCA 1 cut(s) 498
Mph1103I ATGCAT 1 cut(s) 338
MscI TGGCCA 1 cut(s) 498
Msp20I TGGCCA 1 cut(s) 498
MspA1I CMGCKG 1 cut(s) 441
MspI CCGG 1 cut(s) 462
MspR9I CCNGG 1 cut(s) 419
Mva1269I GAATGC 1 cut(s) 488
MvaI CCWGG 1 cut(s) 419
MwoI GCNNNNNNNGC 3 cut(s) 20, 23, 356
NlaIII CATG 1 cut(s) 188
NlaIV GGNNCC 2 cut(s) 358, 460
NmeAIII GCCGAG 2 cut(s) 179, 331
NsiI ATGCAT 1 cut(s) 338
NspV TTCGAA 1 cut(s) 114
PceI AGGCCT 1 cut(s) 390
PctI GAATGC 1 cut(s) 488
PfeI GAWTC 2 cut(s) 236, 401
PinAI ACCGGT 1 cut(s) 461
PkrI GCNGC 5 cut(s) 16, 19, 22, 25, 443
Psp6I CCWGG 1 cut(s) 417
PspFI CCCAGC 1 cut(s) 203
PspGI CCWGG 1 cut(s) 417
PspN4I GGNNCC 2 cut(s) 358, 460
PspPI GGNCC 1 cut(s) 126
RsaI GTAC 1 cut(s) 264
RsaNI GTAC 1 cut(s) 263
SatI GCNGC 5 cut(s) 15, 18, 21, 24, 442
Sau96I GGNCC 1 cut(s) 126
ScrFI CCNGG 1 cut(s) 419
SduI GDGCHC 1 cut(s) 200
SetI ASST 3 cut(s) 124, 358, 451
SfaNI GCATC 1 cut(s) 323
SfuI TTCGAA 1 cut(s) 114
Sse9I AATT 4 cut(s) 74, 79, 92, 276
SseBI AGGCCT 1 cut(s) 390
SsiI CCGC 2 cut(s) 439, 486
SspI AATATT 1 cut(s) 408
SspMI CTAG 2 cut(s) 123, 446
StuI AGGCCT 1 cut(s) 390
StyD4I CCNGG 1 cut(s) 417
StyI CCWWGG 1 cut(s) 445
TaqI TCGA 2 cut(s) 68, 114
TasI AATT 4 cut(s) 74, 79, 92, 276
TfiI GAWTC 2 cut(s) 236, 401
TscAI CASTG 1 cut(s) 148
TseI GCWGC 5 cut(s) 14, 17, 20, 23, 441
TspDTI ATGAA 1 cut(s) 98
TspRI CASTG 1 cut(s) 148
XapI RAATTY 2 cut(s) 79, 92
XmaJI CCTAGG 1 cut(s) 445
XspI CTAG 2 cut(s) 123, 446
Zsp2I ATGCAT 1 cut(s) 338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.