Prupe.7G095800_v2.0.a1

S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
12796225 .. 12797096
872 bp
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UTR
Exon/CDS
Intron
Prupe.7G095800.1

Sequence Viewer

Length: 219 bp
ATGGTTTATAGAAATCGTCTTTGTCCGGCAGTTGACTTCGGCACTTGCTCAGTGGTTCGCGGCGATGCGGAGCACTGGTGCCATAAGCTGATTGATCAATCAAGCAGATGCGAGCTACATAGTTGCATTAACGAATGCTCCAAAGAACCATCTGGTGTGGGAGTGTGCCAAAATACAGTTTGTTTTTGCACATACTATTGTAAGGATCCTGTAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

73

Amino Acids

8.12

Weight (kDa)

6.78

Isoelectric Point (pI)

45.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g21690
prunus_persica Prupe.7G083400_v2.0.a1 Prupe.7G095800_v2.0.a1
rosa_rugosa Rorug03G0169800
rosa_samantha Rh3BG253000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 78
AccII CGCG 1 cut(s) 60
AciI CCGC 2 cut(s) 60, 68
AclWI GGATC 2 cut(s) 200, 213
AluBI AGCT 2 cut(s) 88, 115
AluI AGCT 2 cut(s) 88, 115
Alw21I GWGCWC 1 cut(s) 75
AlwI GGATC 2 cut(s) 200, 213
BamHI GGATCC 1 cut(s) 205
BanI GGYRCC 1 cut(s) 78
Bbv12I GWGCWC 1 cut(s) 75
BccI CCATC 1 cut(s) 157
BclI TGATCA 1 cut(s) 94
BisI GCNGC 1 cut(s) 61
BlsI GCNGC 1 cut(s) 62
BmiI GGNNCC 2 cut(s) 80, 207
BmsI GCATC 2 cut(s) 55, 98
BsaXI ACNNNNNCTCC 4 cut(s) 62, 92, 122, 152
Bse1I ACTGG 1 cut(s) 80
BseMII CTCAG 1 cut(s) 63
BseNI ACTGG 1 cut(s) 80
Bsh1236I CGCG 1 cut(s) 60
BshNI GGYRCC 1 cut(s) 78
BsiHKAI GWGCWC 1 cut(s) 75
BsiSI CCGG 1 cut(s) 26
BsmI GAATGC 1 cut(s) 140
Bsp1286I GDGCHC 1 cut(s) 75
Bsp143I GATC 2 cut(s) 94, 205
BspACI CCGC 2 cut(s) 60, 68
BspCNI CTCAG 1 cut(s) 62
BspFNI CGCG 1 cut(s) 60
BspLI GGNNCC 2 cut(s) 80, 207
BspPI GGATC 2 cut(s) 200, 213
BspT107I GGYRCC 1 cut(s) 78
BsrI ACTGG 1 cut(s) 80
BssMI GATC 2 cut(s) 94, 205
Bst4CI ACNGT 1 cut(s) 178
BstC8I GCNNGC 1 cut(s) 113
BstDEI CTNAG 1 cut(s) 49
BstFNI CGCG 1 cut(s) 60
BstKTI GATC 2 cut(s) 97, 208
BstMBI GATC 2 cut(s) 94, 205
BstUI CGCG 1 cut(s) 60
BstX2I RGATCY 1 cut(s) 205
BstYI RGATCY 1 cut(s) 205
BtgZI GCGATG 1 cut(s) 78
BtsIMutI CAGTG 2 cut(s) 57, 73
Cac8I GCNNGC 1 cut(s) 113
CviJI RGCY 2 cut(s) 88, 115
CviKI_1 RGCY 2 cut(s) 88, 115
DdeI CTNAG 1 cut(s) 49
DpnI GATC 2 cut(s) 96, 207
DpnII GATC 2 cut(s) 94, 205
FaiI YATR 4 cut(s) 9, 84, 120, 193
FbaI TGATCA 1 cut(s) 94
Fnu4HI GCNGC 1 cut(s) 61
Fsp4HI GCNGC 1 cut(s) 61
GluI GCNGC 1 cut(s) 61
HapII CCGG 1 cut(s) 26
HincII GTYRAC 1 cut(s) 34
HindII GTYRAC 1 cut(s) 34
HpaII CCGG 1 cut(s) 26
Hpy166II GTNNAC 1 cut(s) 34
Hpy8I GTNNAC 1 cut(s) 34
HpyCH4III ACNGT 1 cut(s) 178
HpyCH4V TGCA 2 cut(s) 126, 189
HpyF3I CTNAG 1 cut(s) 49
Ksp22I TGATCA 1 cut(s) 94
Kzo9I GATC 2 cut(s) 94, 205
LmnI GCTCC 2 cut(s) 70, 143
LpnPI CCDG 3 cut(s) 39, 61, 138
LweI GCATC 2 cut(s) 55, 98
MalI GATC 2 cut(s) 96, 207
MboI GATC 2 cut(s) 94, 205
MflI RGATCY 1 cut(s) 205
MhlI GDGCHC 1 cut(s) 75
MseI TTAA 1 cut(s) 129
MspI CCGG 1 cut(s) 26
Mva1269I GAATGC 1 cut(s) 140
MvnI CGCG 1 cut(s) 60
NdeII GATC 2 cut(s) 94, 205
NlaIV GGNNCC 2 cut(s) 80, 207
PctI GAATGC 1 cut(s) 140
PkrI GCNGC 1 cut(s) 62
PspN4I GGNNCC 2 cut(s) 80, 207
PsuI RGATCY 1 cut(s) 205
SaqAI TTAA 1 cut(s) 129
SatI GCNGC 1 cut(s) 61
Sau3AI GATC 2 cut(s) 94, 205
SduI GDGCHC 1 cut(s) 75
SetI ASST 2 cut(s) 90, 117
SfaNI GCATC 2 cut(s) 55, 98
SgeI CNNG 7 cut(s) 38, 57, 71, 88, 114, 124, 165
SsiI CCGC 2 cut(s) 60, 68
TaaI ACNGT 1 cut(s) 178
TauI GCSGC 1 cut(s) 63
Tru1I TTAA 1 cut(s) 129
Tru9I TTAA 1 cut(s) 129
TscAI CASTG 2 cut(s) 57, 80
TspRI CASTG 2 cut(s) 57, 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.