Prupe.7G106300_v2.0.a1

F-box LRR-repeat protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
13507517 .. 13508808
1292 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G106300.1

Sequence Viewer

Length: 585 bp
ATGGAACACAAGAATAAGTTAAGGGCTACTGCAAGTTGTGAATGTGGAAGAGTTCATACTGAGAGCTTGGTGGACAGATTCAGTAATCTTACACTGGAAGTTGCCCATCACATTCTTTCGTTCCTTGATATAGAAGAGCTCACTCGTTTCAGTTGTGGGTCCAAAGGATGCAGGGAGCTTTCTCTGTCAGCTCCCTCAATGAATTTTATTTTTTCATTGGTGGATACGTCCACATGTGAGCTTAGGGTGAAGTTGTTGAACACATTGGATAGGTTCTTGTTTCATCGTCGGGATAATAAGATACAGTCGTTTTATCTTTTTTGGGATGGTCACTACACAGAGGAGGGCAATTACAAAGCATGCTACTTATGTAGTAATGAGAATTTTCGAATCATCACTTGGATCCACAATGCAGTGAGGTGTAATGTTTTAGTGCTTTGTCTTGACATCTTGTTATGTGATTTTGAGGAGGAAGGGTTAGCATTTCCATCTTGCGTCTTTCTTTCCACATCGTTGAGGTCTCTAAATGTGGTGCAAATGAAGGGCATCACTATTGAAACTCCCCCCCTCTGCCTTTTCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

195

Amino Acids

22.32

Weight (kDa)

5.97

Isoelectric Point (pI)

54.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019303)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 397, 410
AcsI RAATTY 2 cut(s) 202, 382
AflIII ACRYGT 1 cut(s) 233
AgsI TTSAA 2 cut(s) 259, 557
AjuI GAANNNNNNNTTGG 2 cut(s) 382, 414
AluBI AGCT 5 cut(s) 66, 139, 178, 191, 241
AluI AGCT 5 cut(s) 66, 139, 178, 191, 241
Alw21I GWGCWC 1 cut(s) 141
Alw26I GTCTC 1 cut(s) 525
AlwI GGATC 2 cut(s) 397, 410
ApoI RAATTY 2 cut(s) 202, 382
AspS9I GGNCC 1 cut(s) 159
AsuHPI GGTGA 1 cut(s) 259
AsuII TTCGAA 1 cut(s) 388
AvaII GGWCC 1 cut(s) 159
BaeI ACNNNNGTAYC 2 cut(s) 293, 326
BamHI GGATCC 1 cut(s) 402
BanII GRGCYC 1 cut(s) 141
BarI GAAGNNNNNNTAC 2 cut(s) 40, 72
Bbv12I GWGCWC 1 cut(s) 141
BccI CCATC 3 cut(s) 114, 320, 496
BciVI GTATCC 1 cut(s) 217
BcoDI GTCTC 1 cut(s) 525
BfuI GTATCC 1 cut(s) 217
Bme18I GGWCC 1 cut(s) 159
BmgT120I GGNCC 1 cut(s) 159
BmiI GGNNCC 2 cut(s) 160, 404
BmsI GCATC 2 cut(s) 158, 555
Bpu10I CCTNAGC 1 cut(s) 242
Bpu14I TTCGAA 1 cut(s) 388
BsaI GGTCTC 1 cut(s) 525
BsaXI ACNNNNNCTCC 2 cut(s) 461, 491
Bse1I ACTGG 1 cut(s) 99
BseGI GGATG 2 cut(s) 173, 331
BseMII CTCAG 1 cut(s) 51
BseNI ACTGG 1 cut(s) 99
BseRI GAGGAG 2 cut(s) 356, 482
BsiHKAI GWGCWC 1 cut(s) 141
BsmAI GTCTC 1 cut(s) 525
Bso31I GGTCTC 1 cut(s) 525
Bsp119I TTCGAA 1 cut(s) 388
Bsp1286I GDGCHC 1 cut(s) 141
Bsp143I GATC 1 cut(s) 402
BspCNI CTCAG 1 cut(s) 52
BspLI GGNNCC 2 cut(s) 160, 404
BspPI GGATC 2 cut(s) 397, 410
BspQI GCTCTTC 1 cut(s) 129
BspT104I TTCGAA 1 cut(s) 388
BspTNI GGTCTC 1 cut(s) 525
BsrI ACTGG 1 cut(s) 99
BssMI GATC 1 cut(s) 402
Bst4CI ACNGT 1 cut(s) 306
Bst6I CTCTTC 2 cut(s) 43, 129
BstBI TTCGAA 1 cut(s) 388
BstC8I GCNNGC 1 cut(s) 361
BstDEI CTNAG 2 cut(s) 60, 242
BstF5I GGATG 2 cut(s) 173, 331
BstKTI GATC 1 cut(s) 405
BstMAI GTCTC 1 cut(s) 525
BstMBI GATC 1 cut(s) 402
BstNSI RCATGY 2 cut(s) 237, 363
BstX2I RGATCY 1 cut(s) 402
BstYI RGATCY 1 cut(s) 402
BsuI GTATCC 1 cut(s) 217
BtsCI GGATG 2 cut(s) 173, 331
BtsI GCAGTG 1 cut(s) 420
BtsIMutI CAGTG 2 cut(s) 92, 420
Cac8I GCNNGC 1 cut(s) 361
Cfr13I GGNCC 1 cut(s) 159
CseI GACGC 1 cut(s) 484
CviAII CATG 2 cut(s) 234, 360
CviJI RGCY 6 cut(s) 26, 66, 139, 178, 191, 241
CviKI_1 RGCY 6 cut(s) 26, 66, 139, 178, 191, 241
DdeI CTNAG 2 cut(s) 60, 242
DpnI GATC 1 cut(s) 404
DpnII GATC 1 cut(s) 402
Eam1104I CTCTTC 2 cut(s) 43, 129
EarI CTCTTC 2 cut(s) 43, 129
Ecl136II GAGCTC 1 cut(s) 139
Eco24I GRGCYC 1 cut(s) 141
Eco31I GGTCTC 1 cut(s) 525
Eco47I GGWCC 1 cut(s) 159
Eco53kI GAGCTC 1 cut(s) 139
EcoICRI GAGCTC 1 cut(s) 139
EcoT38I GRGCYC 1 cut(s) 141
FaeI CATG 2 cut(s) 237, 363
FaiI YATR 6 cut(s) 57, 131, 235, 361, 370, 457
FatI CATG 2 cut(s) 233, 359
FokI GGATG 2 cut(s) 180, 338
FriOI GRGCYC 1 cut(s) 141
HgaI GACGC 1 cut(s) 484
Hin1II CATG 2 cut(s) 237, 363
HinfI GANTC 2 cut(s) 78, 390
HphI GGTGA 1 cut(s) 259
Hpy166II GTNNAC 2 cut(s) 73, 231
Hpy188III TCNNGA 2 cut(s) 290, 443
Hpy8I GTNNAC 2 cut(s) 73, 231
Hpy99I CGWCG 1 cut(s) 291
HpyAV CCTTC 2 cut(s) 467, 535
HpyCH4III ACNGT 1 cut(s) 306
HpyCH4IV ACGT 1 cut(s) 227
HpyCH4V TGCA 4 cut(s) 32, 171, 413, 535
HpyF3I CTNAG 2 cut(s) 60, 242
HpySE526I ACGT 1 cut(s) 227
Hsp92II CATG 2 cut(s) 237, 363
Kzo9I GATC 1 cut(s) 402
LguI GCTCTTC 1 cut(s) 129
LmnI GCTCC 2 cut(s) 175, 196
LpnPI CCDG 2 cut(s) 80, 157
LweI GCATC 2 cut(s) 158, 555
MaeII ACGT 1 cut(s) 227
MaeIII GTNAC 1 cut(s) 329
MalI GATC 1 cut(s) 404
MboI GATC 1 cut(s) 402
MboII GAAGA 2 cut(s) 60, 146
MflI RGATCY 1 cut(s) 402
MhlI GDGCHC 1 cut(s) 141
MluCI AATT 3 cut(s) 202, 349, 382
MnlI CCTC 8 cut(s) 205, 334, 337, 411, 460, 463, 510, 578
MseI TTAA 1 cut(s) 20
NdeII GATC 1 cut(s) 402
NlaIII CATG 2 cut(s) 237, 363
NlaIV GGNNCC 2 cut(s) 160, 404
NmuCI GTSAC 1 cut(s) 329
NspI RCATGY 2 cut(s) 237, 363
NspV TTCGAA 1 cut(s) 388
PaeI GCATGC 1 cut(s) 363
PciI ACATGT 1 cut(s) 233
PciSI GCTCTTC 1 cut(s) 129
PfeI GAWTC 2 cut(s) 78, 390
PscI ACATGT 1 cut(s) 233
Psp124BI GAGCTC 1 cut(s) 141
PspN4I GGNNCC 2 cut(s) 160, 404
PspPI GGNCC 1 cut(s) 159
PsuI RGATCY 1 cut(s) 402
SacI GAGCTC 1 cut(s) 141
SapI GCTCTTC 1 cut(s) 129
SaqAI TTAA 1 cut(s) 20
Sau3AI GATC 1 cut(s) 402
Sau96I GGNCC 1 cut(s) 159
SduI GDGCHC 1 cut(s) 141
SetI ASST 9 cut(s) 68, 141, 180, 193, 230, 243, 275, 422, 521
SfaNI GCATC 2 cut(s) 158, 555
SfuI TTCGAA 1 cut(s) 388
SinI GGWCC 1 cut(s) 159
SphI GCATGC 1 cut(s) 363
Sse9I AATT 3 cut(s) 202, 349, 382
SstI GAGCTC 1 cut(s) 141
TaaI ACNGT 1 cut(s) 306
TaiI ACGT 1 cut(s) 230
TaqI TCGA 1 cut(s) 388
TasI AATT 3 cut(s) 202, 349, 382
TfiI GAWTC 2 cut(s) 78, 390
Tru1I TTAA 1 cut(s) 20
Tru9I TTAA 1 cut(s) 20
TscAI CASTG 2 cut(s) 99, 420
TseFI GTSAC 1 cut(s) 329
Tsp45I GTSAC 1 cut(s) 329
TspDTI ATGAA 5 cut(s) 44, 204, 215, 272, 554
TspRI CASTG 2 cut(s) 99, 420
VpaK11BI GGWCC 1 cut(s) 159
XapI RAATTY 2 cut(s) 202, 382
XceI RCATGY 2 cut(s) 237, 363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.