LRR-repeat protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.7G106300_v2.0.a1 |
| pyrus_communis | pycom14g02510 |
| rosa_multiflora | Rmu_sc0004386.1_g000022 Rmu_sc0009233.1_g000001 Rmu_sc0010389.1_g000010 |
| rosa_samantha | Rh2BG191800 Rh2CG186500 Rh2DG188400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 476 |
| AclWI | GGATC | 2 cut(s) | 395, 505 |
| AcsI | RAATTY | 3 cut(s) | 184, 194, 214 |
| AcuI | CTGAAG | 1 cut(s) | 615 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 255 |
| AgsI | TTSAA | 5 cut(s) | 184, 268, 416, 521, 650 |
| AjiI | CACGTC | 1 cut(s) | 384 |
| AluBI | AGCT | 1 cut(s) | 121 |
| AluI | AGCT | 1 cut(s) | 121 |
| Alw21I | GWGCWC | 1 cut(s) | 123 |
| Alw26I | GTCTC | 1 cut(s) | 662 |
| AlwI | GGATC | 2 cut(s) | 395, 505 |
| ApoI | RAATTY | 3 cut(s) | 184, 194, 214 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 420 |
| AspS9I | GGNCC | 1 cut(s) | 507 |
| AsuHPI | GGTGA | 3 cut(s) | 50, 115, 347 |
| AvaII | GGWCC | 1 cut(s) | 507 |
| BaeGI | GKGCMC | 1 cut(s) | 549 |
| BanII | GRGCYC | 1 cut(s) | 123 |
| Bbv12I | GWGCWC | 1 cut(s) | 123 |
| BbvCI | CCTCAGC | 1 cut(s) | 503 |
| BccI | CCATC | 1 cut(s) | 96 |
| BclI | TGATCA | 1 cut(s) | 240 |
| BcoDI | GTCTC | 1 cut(s) | 662 |
| BfaI | CTAG | 1 cut(s) | 71 |
| BglII | AGATCT | 1 cut(s) | 432 |
| Bme18I | GGWCC | 1 cut(s) | 507 |
| BmgBI | CACGTC | 1 cut(s) | 384 |
| BmgT120I | GGNCC | 1 cut(s) | 507 |
| BpmI | CTGGAG | 1 cut(s) | 449 |
| Bpu10I | CCTNAGC | 2 cut(s) | 233, 503 |
| BsaI | GGTCTC | 1 cut(s) | 662 |
| BsaJI | CCNNGG | 2 cut(s) | 249, 510 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 255 |
| BseDI | CCNNGG | 2 cut(s) | 249, 510 |
| BseGI | GGATG | 1 cut(s) | 140 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 255 |
| BseMII | CTCAG | 3 cut(s) | 108, 494, 583 |
| BseRI | GAGGAG | 3 cut(s) | 42, 617, 651 |
| BseSI | GKGCMC | 1 cut(s) | 549 |
| BsiHKAI | GWGCWC | 1 cut(s) | 123 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 255 |
| BsmAI | GTCTC | 1 cut(s) | 662 |
| BsmI | GAATGC | 2 cut(s) | 93, 595 |
| Bso31I | GGTCTC | 1 cut(s) | 662 |
| Bsp1286I | GDGCHC | 2 cut(s) | 123, 549 |
| Bsp143I | GATC | 4 cut(s) | 240, 387, 432, 497 |
| BspACI | CCGC | 1 cut(s) | 476 |
| BspCNI | CTCAG | 3 cut(s) | 109, 495, 582 |
| BspPI | GGATC | 2 cut(s) | 395, 505 |
| BspTNI | GGTCTC | 1 cut(s) | 662 |
| BssECI | CCNNGG | 2 cut(s) | 249, 510 |
| BssMI | GATC | 4 cut(s) | 240, 387, 432, 497 |
| BssT1I | CCWWGG | 2 cut(s) | 249, 510 |
| Bst4CI | ACNGT | 2 cut(s) | 335, 535 |
| Bst6I | CTCTTC | 1 cut(s) | 442 |
| BstDEI | CTNAG | 4 cut(s) | 117, 233, 503, 569 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 253 |
| BstF5I | GGATG | 1 cut(s) | 140 |
| BstKTI | GATC | 4 cut(s) | 243, 390, 435, 500 |
| BstMAI | GTCTC | 1 cut(s) | 662 |
| BstMBI | GATC | 4 cut(s) | 240, 387, 432, 497 |
| BstSLI | GKGCMC | 1 cut(s) | 549 |
| BstX2I | RGATCY | 1 cut(s) | 432 |
| BstYI | RGATCY | 1 cut(s) | 432 |
| BtgZI | GCGATG | 1 cut(s) | 74 |
| BtrI | CACGTC | 1 cut(s) | 384 |
| BtsCI | GGATG | 1 cut(s) | 140 |
| Cfr13I | GGNCC | 1 cut(s) | 507 |
| CviAII | CATG | 2 cut(s) | 219, 348 |
| CviJI | RGCY | 5 cut(s) | 121, 232, 294, 609, 643 |
| CviKI_1 | RGCY | 5 cut(s) | 121, 232, 294, 609, 643 |
| DdeI | CTNAG | 4 cut(s) | 117, 233, 503, 569 |
| DpnI | GATC | 4 cut(s) | 242, 389, 434, 499 |
| DpnII | GATC | 4 cut(s) | 240, 387, 432, 497 |
| Eam1104I | CTCTTC | 1 cut(s) | 442 |
| EarI | CTCTTC | 1 cut(s) | 442 |
| EciI | GGCGGA | 1 cut(s) | 465 |
| Ecl136II | GAGCTC | 1 cut(s) | 121 |
| Eco130I | CCWWGG | 2 cut(s) | 249, 510 |
| Eco24I | GRGCYC | 1 cut(s) | 123 |
| Eco31I | GGTCTC | 1 cut(s) | 662 |
| Eco47I | GGWCC | 1 cut(s) | 507 |
| Eco53kI | GAGCTC | 1 cut(s) | 121 |
| Eco57I | CTGAAG | 1 cut(s) | 615 |
| EcoICRI | GAGCTC | 1 cut(s) | 121 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 253 |
| EcoO109I | RGGNCCY | 1 cut(s) | 507 |
| EcoRI | GAATTC | 1 cut(s) | 214 |
| EcoT14I | CCWWGG | 2 cut(s) | 249, 510 |
| EcoT38I | GRGCYC | 1 cut(s) | 123 |
| ErhI | CCWWGG | 2 cut(s) | 249, 510 |
| FaeI | CATG | 2 cut(s) | 222, 351 |
| FaiI | YATR | 6 cut(s) | 59, 113, 220, 349, 444, 676 |
| FatI | CATG | 2 cut(s) | 218, 347 |
| FbaI | TGATCA | 1 cut(s) | 240 |
| FokI | GGATG | 1 cut(s) | 147 |
| FriOI | GRGCYC | 1 cut(s) | 123 |
| FspBI | CTAG | 1 cut(s) | 71 |
| GsuI | CTGGAG | 1 cut(s) | 449 |
| Hin1II | CATG | 2 cut(s) | 222, 351 |
| HincII | GTYRAC | 1 cut(s) | 171 |
| HindII | GTYRAC | 1 cut(s) | 171 |
| HinfI | GANTC | 1 cut(s) | 581 |
| HphI | GGTGA | 3 cut(s) | 50, 115, 347 |
| Hpy166II | GTNNAC | 1 cut(s) | 171 |
| Hpy188I | TCNGA | 3 cut(s) | 134, 285, 572 |
| Hpy188III | TCNNGA | 2 cut(s) | 323, 428 |
| Hpy8I | GTNNAC | 1 cut(s) | 171 |
| HpyAV | CCTTC | 2 cut(s) | 14, 489 |
| HpyCH4III | ACNGT | 2 cut(s) | 335, 535 |
| HpyCH4IV | ACGT | 1 cut(s) | 383 |
| HpyCH4V | TGCA | 1 cut(s) | 670 |
| HpyF3I | CTNAG | 4 cut(s) | 117, 233, 503, 569 |
| HpySE526I | ACGT | 1 cut(s) | 383 |
| Hsp92II | CATG | 2 cut(s) | 222, 351 |
| Ksp22I | TGATCA | 1 cut(s) | 240 |
| Kzo9I | GATC | 4 cut(s) | 240, 387, 432, 497 |
| LpnPI | CCDG | 2 cut(s) | 336, 413 |
| MaeI | CTAG | 1 cut(s) | 71 |
| MaeII | ACGT | 1 cut(s) | 383 |
| MalI | GATC | 4 cut(s) | 242, 389, 434, 499 |
| MboI | GATC | 4 cut(s) | 240, 387, 432, 497 |
| MboII | GAAGA | 3 cut(s) | 353, 429, 655 |
| MflI | RGATCY | 1 cut(s) | 432 |
| MhlI | GDGCHC | 2 cut(s) | 123, 549 |
| MluCI | AATT | 5 cut(s) | 184, 194, 214, 244, 268 |
| MlyI | GAGTC | 1 cut(s) | 590 |
| MroXI | GAANNNNTTC | 1 cut(s) | 420 |
| MseI | TTAA | 2 cut(s) | 360, 540 |
| Mva1269I | GAATGC | 2 cut(s) | 93, 595 |
| NdeII | GATC | 4 cut(s) | 240, 387, 432, 497 |
| NlaIII | CATG | 2 cut(s) | 222, 351 |
| PctI | GAATGC | 2 cut(s) | 93, 595 |
| PdmI | GAANNNNTTC | 1 cut(s) | 420 |
| PleI | GAGTC | 1 cut(s) | 589 |
| PpsI | GAGTC | 1 cut(s) | 589 |
| PpuMI | RGGWCCY | 1 cut(s) | 507 |
| Psp124BI | GAGCTC | 1 cut(s) | 123 |
| Psp5II | RGGWCCY | 1 cut(s) | 507 |
| PspPI | GGNCC | 1 cut(s) | 507 |
| PspPPI | RGGWCCY | 1 cut(s) | 507 |
| PsuI | RGATCY | 1 cut(s) | 432 |
| SacI | GAGCTC | 1 cut(s) | 123 |
| SaqAI | TTAA | 2 cut(s) | 360, 540 |
| Sau3AI | GATC | 4 cut(s) | 240, 387, 432, 497 |
| Sau96I | GGNCC | 1 cut(s) | 507 |
| SchI | GAGTC | 1 cut(s) | 590 |
| SduI | GDGCHC | 2 cut(s) | 123, 549 |
| SetI | ASST | 8 cut(s) | 25, 34, 123, 239, 260, 386, 509, 658 |
| SinI | GGWCC | 1 cut(s) | 507 |
| Sse9I | AATT | 5 cut(s) | 184, 194, 214, 244, 268 |
| SsiI | CCGC | 1 cut(s) | 476 |
| SspMI | CTAG | 1 cut(s) | 71 |
| SstI | GAGCTC | 1 cut(s) | 123 |
| StyI | CCWWGG | 2 cut(s) | 249, 510 |
| TaaI | ACNGT | 2 cut(s) | 335, 535 |
| TaiI | ACGT | 1 cut(s) | 386 |
| TaqI | TCGA | 3 cut(s) | 206, 373, 584 |
| TasI | AATT | 5 cut(s) | 184, 194, 214, 244, 268 |
| Tru1I | TTAA | 2 cut(s) | 360, 540 |
| Tru9I | TTAA | 2 cut(s) | 360, 540 |
| TspDTI | ATGAA | 5 cut(s) | 207, 354, 413, 462, 602 |
| VpaK11BI | GGWCC | 1 cut(s) | 507 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 253 |
| XapI | RAATTY | 3 cut(s) | 184, 194, 214 |
| XmnI | GAANNNNTTC | 1 cut(s) | 420 |
| XspI | CTAG | 1 cut(s) | 71 |