Prupe.7G123300_v2.0.a1

permease

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
14567558 .. 14569611
2054 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G123300.1

Sequence Viewer

Length: 1728 bp
ATGGTGTCCAAAAGTCTTAGCTTCAATCTCCATCTTCATCCCCACCCCTCTTTTCCCTCTGCAATTTCCAGAATTAATCCAAGACCTTGTAACTTTGTCACCACCACACCGTTATTGTCATCAACTACCATAACTATCAGATGCAATGCCAACCATGACCAAGCCAATTTCCACCATCTTTCACTTGGAAGAAGCCCCATTTTCACCACCATGGCATCAACACAACACAACCCAAGTCCCAAATTCGATGAGTTCGAATCCGATCCCACGCTTACAAACGACGATCTCAAGCCCACAACACTTGATCAAAGGACTTTTTCCAGGTGGGAATTGGCTAGTCTTTGGGTAGGACTAGTTGTGGGGGTGCCAACTTACTATTTAGCTGGTAGTCTTGTTGACCTTGGCATGGCTTGGTGGCAAGGAATTGCAACAGTTGTAGCAGCCAACATAATACTATTAGTCCCATTGGTCCTCACTGGCCATCCAGGGACAAAATATGGCATCTCTTTCCCAGTTTTAGCCCGTTCCTCATTTGGTATTTATGGTGCTCATATTCCCACTCTTCTTAGAGCCTTGGTTGGTTGTGGTTGGTATGGAATTGAGACTTGGATTGGTGGTGAAGCCATTTTCATTTTGCTACCAAATTCAATCAAACAGTCTTCTTTGTCTCAGGTCTTACCTTGGCTTGGCACATCACCATTGGAATTTGGTTGTTTTATTGTGTTTTGGCTTGCCCAATTGGCCATTGTTTGGAAAGGAATGGATGGAATTAGGGAACTTGAGAAATACTCAGCTCCAGTTCTCATCGCACTCACTTCCTGCCTTCTCATTTGGGCTTATGTCAAAGCTGGTGGTTTCAGCCACATGCTTTCCTTGTCCTCTAGGCTCACCTCCAAGCAATTTTGGTCCCTCTTTTTCCCTTCCTTAACTGCTAATATAAGCTTTTGGGCTACTCTTGCTCTTAACATACCAGATTTCACCAGATATGCCAAGAGCCAGACTGACCAAATCATCGGTCAAGCCGGGCTACCAATCTTCATGGGGGCATTCACATTTGTTGGCCTAGCTGTAACCTGCTCGACAGAAGTGATTTTCGGGCGTGTCATTTCGAATCCGATTCAACTTCTCGGGCAAATTGGAGGGTTCACAACGATCATTCTAGCCATTTTTGGTGTTAGCCTTGCCACCCTCACAACCAACATTGCAGCCAATGTTGTGGCCCCTGCAAACGCTCTTGTGAATCTCAGCCCTTCAAAGTTCACCTTCAGAAGAGGAGCTATTCTCACAGCTTTGCTTGGAATTGCATTTCAGCCATGGAGGCTTCTCAAGTCAAGTGAGAGCTTTGTGTACACATGGCTAGTTGGATACTCTGCTCTGTTGGGTCCAATTGGAGGCATAATTCTAGCAGATTACTATCTTATCCATAACAAAAACCTAAGCATGAAGGACTTGTACTCACTAAGTCCTTTTGGGGACTATTATTATTCAGGAGGCTACAATTTGGCAGCAATGGCAGCTCTTGTTGTTGGGATTTTGCCTGTGGTTCCAGGCTTCTTGCAAAAAATTGGCCTTCTTTCTTCAATATCAGATGCTTATGTGATCATCTACAACAATGCTTGGTTTTTCAGCTTTTTCTCTGCCGGTTTGCTCTACTGGCTTCTGTCAAGTTTGACAAGAAAACAGAACTCTCTGCCTGCAGAAGAACCCCTCTTGCCTCCTGCAAACTAA

Protein Analysis

576

Amino Acids

62.79

Weight (kDa)

8.87

Isoelectric Point (pI)

40.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015211)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03555
fragaria_vesca FvH4_6g17170
malus_domestica MD12G1103200.v1.1
prunus_persica Prupe.7G123300_v2.0.a1
pyrus_communis pycom12g10160
rosa_chinensis RchiOBHm_Chr3g0471261
rosa_laevigata RLG00000024193
rosa_multiflora Rmu_co8430243.1_g000001 Rmu_sc0009082.1_g000011
rosa_roxburghii Rroxscaffold_6G00410160
rosa_rugosa Rorug03G0116700
rosa_samantha Rh3AG165800 Rh3BG191200 Rh3CG181500 Rh3DG184400
rosa_wichuraiana Rw3G015610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1082
AccB1I GGYRCC 1 cut(s) 364
AccB7I CCANNNNNTGG 1 cut(s) 750
AclWI GGATC 1 cut(s) 257
AcoI YGGCCR 2 cut(s) 478, 741
AcsI RAATTY 3 cut(s) 242, 643, 704
AcuI CTGAAG 1 cut(s) 1249
AfaI GTAC 2 cut(s) 1349, 1454
AfiI CCNNNNNNNGG 4 cut(s) 406, 686, 750, 1391
AgsI TTSAA 5 cut(s) 25, 648, 1121, 1254, 1581
AhlI ACTAGT 1 cut(s) 352
AjnI CCWGG 3 cut(s) 320, 484, 1546
AjuI GAANNNNNNNTTGG 2 cut(s) 589, 621
Alw21I GWGCWC 1 cut(s) 550
Alw26I GTCTC 2 cut(s) 596, 672
AlwI GGATC 1 cut(s) 257
Ama87I CYCGRG 1 cut(s) 1127
AoxI GGCC 5 cut(s) 478, 741, 1060, 1218, 1567
ApeKI GCWGC 4 cut(s) 440, 1205, 1505, 1514
ApoI RAATTY 3 cut(s) 242, 643, 704
ArsI GACNNNNNNTTYG 2 cut(s) 1000, 1032
AseI ATTAAT 1 cut(s) 75
AspS9I GGNCC 4 cut(s) 469, 906, 1219, 1382
AsuC2I CCSGG 1 cut(s) 1024
AsuHPI GGTGA 7 cut(s) 91, 196, 629, 687, 880, 970, 1252
AsuII TTCGAA 2 cut(s) 255, 1109
AvaI CYCGRG 1 cut(s) 1127
AvaII GGWCC 3 cut(s) 469, 906, 1382
BalI TGGCCA 2 cut(s) 480, 743
BanI GGYRCC 1 cut(s) 364
BarI GAAGNNNNNNTAC 2 cut(s) 1436, 1468
BbsI GAAGAC 1 cut(s) 651
Bbv12I GWGCWC 1 cut(s) 550
BbvI GCAGC 4 cut(s) 452, 1217, 1517, 1526
BccI CCATC 4 cut(s) 39, 183, 489, 758
BciT130I CCWGG 3 cut(s) 322, 486, 1548
BciVI GTATCC 1 cut(s) 1358
BclI TGATCA 2 cut(s) 304, 1599
BcnI CCSGG 1 cut(s) 1024
BcoDI GTCTC 2 cut(s) 596, 672
BcuI ACTAGT 1 cut(s) 352
BfaI CTAG 7 cut(s) 336, 353, 882, 1064, 1160, 1358, 1403
BfmI CTRYAG 1 cut(s) 1695
BfuAI ACCTGC 1 cut(s) 1082
BfuI GTATCC 1 cut(s) 1358
BglI GCCNNNNNGGC 2 cut(s) 740, 1318
BisI GCNGC 4 cut(s) 441, 1206, 1506, 1515
BlsI GCNGC 4 cut(s) 442, 1207, 1507, 1516
Bme1390I CCNGG 4 cut(s) 322, 486, 1024, 1548
Bme18I GGWCC 3 cut(s) 469, 906, 1382
BmeT110I CYCGRG 1 cut(s) 1127
BmgT120I GGNCC 4 cut(s) 469, 906, 1219, 1382
BmiI GGNNCC 5 cut(s) 366, 908, 1221, 1383, 1545
BmrFI CCNGG 4 cut(s) 322, 486, 1024, 1548
BmrI ACTGGG 1 cut(s) 506
BmsI GCATC 4 cut(s) 131, 224, 510, 1579
BmuI ACTGGG 1 cut(s) 506
BpiI GAAGAC 1 cut(s) 651
BplI GAGNNNNNCTC 4 cut(s) 773, 805, 1266, 1298
BpmI CTGGAG 1 cut(s) 780
Bpu10I CCTNAGC 1 cut(s) 1436
Bpu14I TTCGAA 2 cut(s) 255, 1109
BpuEI CTTGAG 3 cut(s) 272, 800, 1310
BpuMI CCSGG 1 cut(s) 1024
BsaBI GATNNNNATC 1 cut(s) 1413
BsaJI CCNNGG 6 cut(s) 210, 400, 485, 573, 680, 1313
Bsc4I CCNNNNNNNGG 4 cut(s) 406, 686, 750, 1391
Bse118I RCCGGY 1 cut(s) 1640
Bse1I ACTGG 4 cut(s) 481, 512, 797, 1658
Bse3DI GCAATG 3 cut(s) 151, 1200, 1515
Bse8I GATNNNNATC 1 cut(s) 1413
BseBI CCWGG 3 cut(s) 322, 486, 1548
BseDI CCNNGG 6 cut(s) 210, 400, 485, 573, 680, 1313
BseGI GGATG 3 cut(s) 37, 481, 769
BseJI GATNNNNATC 1 cut(s) 1413
BseLI CCNNNNNNNGG 4 cut(s) 406, 686, 750, 1391
BseMI GCAATG 3 cut(s) 151, 1200, 1515
BseMII CTCAG 3 cut(s) 683, 804, 1258
BseNI ACTGG 4 cut(s) 481, 512, 797, 1658
BseRI GAGGAG 1 cut(s) 1287
BseXI GCAGC 4 cut(s) 452, 1217, 1517, 1526
BshFI GGCC 5 cut(s) 480, 743, 1062, 1220, 1569
BshNI GGYRCC 1 cut(s) 364
BsiHKAI GWGCWC 1 cut(s) 550
BsiHKCI CYCGRG 1 cut(s) 1127
BsiSI CCGG 2 cut(s) 1023, 1641
BslFI GGGAC 5 cut(s) 222, 446, 502, 892, 1487
BslI CCNNNNNNNGG 4 cut(s) 406, 686, 750, 1391
BsmAI GTCTC 2 cut(s) 596, 672
BsmFI GGGAC 5 cut(s) 222, 446, 502, 892, 1487
BsmI GAATGC 1 cut(s) 1046
BsnI GGCC 5 cut(s) 480, 743, 1062, 1220, 1569
BsoBI CYCGRG 1 cut(s) 1127
Bsp119I TTCGAA 2 cut(s) 255, 1109
Bsp1286I GDGCHC 1 cut(s) 550
Bsp1407I TGTACA 1 cut(s) 1347
Bsp143I GATC 5 cut(s) 262, 283, 304, 1152, 1599
Bsp19I CCATGG 2 cut(s) 210, 1313
BspANI GGCC 5 cut(s) 480, 743, 1062, 1220, 1569
BspCNI CTCAG 3 cut(s) 682, 803, 1257
BspLI GGNNCC 5 cut(s) 366, 908, 1221, 1383, 1545
BspMAI CTGCAG 1 cut(s) 1699
BspMI ACCTGC 1 cut(s) 1082
BspPI GGATC 1 cut(s) 257
BspT104I TTCGAA 2 cut(s) 255, 1109
BspT107I GGYRCC 1 cut(s) 364
BsrDI GCAATG 3 cut(s) 151, 1200, 1515
BsrFI RCCGGY 1 cut(s) 1640
BsrGI TGTACA 1 cut(s) 1347
BsrI ACTGG 4 cut(s) 481, 512, 797, 1658
BssAI RCCGGY 1 cut(s) 1640
BssECI CCNNGG 6 cut(s) 210, 400, 485, 573, 680, 1313
BssMI GATC 5 cut(s) 262, 283, 304, 1152, 1599
BssT1I CCWWGG 5 cut(s) 210, 400, 573, 680, 1313
Bst2UI CCWGG 3 cut(s) 322, 486, 1548
Bst4CI ACNGT 3 cut(s) 111, 433, 657
Bst6I CTCTTC 2 cut(s) 567, 1264
BstAUI TGTACA 1 cut(s) 1347
BstBI TTCGAA 2 cut(s) 255, 1109
BstC8I GCNNGC 2 cut(s) 732, 1695
BstDEI CTNAG 7 cut(s) 17, 566, 669, 790, 1244, 1436, 1460
BstDSI CCRYGG 2 cut(s) 210, 1313
BstF5I GGATG 3 cut(s) 37, 481, 769
BstKTI GATC 5 cut(s) 265, 286, 307, 1155, 1602
BstMAI GTCTC 2 cut(s) 596, 672
BstMBI GATC 5 cut(s) 262, 283, 304, 1152, 1599
BstMWI GCNNNNNNNGC 6 cut(s) 740, 956, 1318, 1511, 1514, 1654
BstNI CCWGG 3 cut(s) 322, 486, 1548
BstNSI RCATGY 1 cut(s) 868
BstSCI CCNGG 4 cut(s) 320, 484, 1022, 1546
BstSFI CTRYAG 1 cut(s) 1695
BstV1I GCAGC 4 cut(s) 452, 1217, 1517, 1526
BstV2I GAAGAC 1 cut(s) 651
BstXI CCANNNNNNTGG 1 cut(s) 1216
BsuI GTATCC 1 cut(s) 1358
BsuRI GGCC 5 cut(s) 480, 743, 1062, 1220, 1569
BtgI CCRYGG 2 cut(s) 210, 1313
BtgZI GCGATG 1 cut(s) 790
BtsCI GGATG 3 cut(s) 37, 481, 769
BtsIMutI CAGTG 1 cut(s) 474
BveI ACCTGC 1 cut(s) 1082
Cac8I GCNNGC 2 cut(s) 732, 1695
Cfr10I RCCGGY 1 cut(s) 1640
Cfr13I GGNCC 4 cut(s) 469, 906, 1219, 1382
Csp6I GTAC 2 cut(s) 1348, 1453
CspCI CAANNNNNGTGG 4 cut(s) 283, 318, 832, 867
CviAII CATG 8 cut(s) 155, 211, 406, 865, 1039, 1314, 1353, 1441
CviQI GTAC 2 cut(s) 1348, 1453
DdeI CTNAG 7 cut(s) 17, 566, 669, 790, 1244, 1436, 1460
DpnI GATC 5 cut(s) 264, 285, 306, 1154, 1601
DpnII GATC 5 cut(s) 262, 283, 304, 1152, 1599
EaeI YGGCCR 2 cut(s) 478, 741
Eam1104I CTCTTC 2 cut(s) 567, 1264
EarI CTCTTC 2 cut(s) 567, 1264
Eco130I CCWWGG 5 cut(s) 210, 400, 573, 680, 1313
Eco47I GGWCC 3 cut(s) 469, 906, 1382
Eco57I CTGAAG 1 cut(s) 1249
Eco88I CYCGRG 1 cut(s) 1127
EcoRII CCWGG 3 cut(s) 320, 484, 1546
EcoT14I CCWWGG 5 cut(s) 210, 400, 573, 680, 1313
ErhI CCWWGG 5 cut(s) 210, 400, 573, 680, 1313
FaeI CATG 8 cut(s) 158, 214, 409, 868, 1042, 1317, 1356, 1444
FalI AAGNNNNNCTT 2 cut(s) 1247, 1279
FaqI GGGAC 5 cut(s) 222, 446, 502, 892, 1487
FatI CATG 8 cut(s) 154, 210, 405, 864, 1038, 1313, 1352, 1440
FbaI TGATCA 2 cut(s) 304, 1599
Fnu4HI GCNGC 4 cut(s) 441, 1206, 1506, 1515
FokI GGATG 3 cut(s) 24, 468, 776
Fsp4HI GCNGC 4 cut(s) 441, 1206, 1506, 1515
FspBI CTAG 7 cut(s) 336, 353, 882, 1064, 1160, 1358, 1403
GluI GCNGC 4 cut(s) 441, 1206, 1506, 1515
GsuI CTGGAG 1 cut(s) 780
HaeIII GGCC 5 cut(s) 480, 743, 1062, 1220, 1569
HapII CCGG 2 cut(s) 1023, 1641
Hin1II CATG 8 cut(s) 158, 214, 409, 868, 1042, 1317, 1356, 1444
HincII GTYRAC 1 cut(s) 397
HindII GTYRAC 1 cut(s) 397
HindIII AAGCTT 1 cut(s) 940
HinfI GANTC 4 cut(s) 257, 1111, 1117, 1240
HpaII CCGG 2 cut(s) 1023, 1641
HphI GGTGA 7 cut(s) 91, 196, 629, 687, 880, 970, 1252
Hpy166II GTNNAC 5 cut(s) 397, 1146, 1260, 1348, 1350
Hpy188I TCNGA 5 cut(s) 140, 262, 1116, 1268, 1588
Hpy188III TCNNGA 2 cut(s) 69, 1488
Hpy8I GTNNAC 5 cut(s) 397, 1146, 1260, 1348, 1350
Hpy99I CGWCG 1 cut(s) 284
HpyAV CCTTC 6 cut(s) 833, 930, 1260, 1273, 1438, 1580
HpyCH4III ACNGT 3 cut(s) 111, 433, 657
HpyCH4V TGCA 9 cut(s) 62, 144, 428, 1205, 1226, 1304, 1558, 1697, 1721
HpyF10VI GCNNNNNNNGC 6 cut(s) 740, 956, 1318, 1511, 1514, 1654
HpyF3I CTNAG 7 cut(s) 17, 566, 669, 790, 1244, 1436, 1460
Hsp92II CATG 8 cut(s) 158, 214, 409, 868, 1042, 1317, 1356, 1444
Ksp22I TGATCA 2 cut(s) 304, 1599
Kzo9I GATC 5 cut(s) 262, 283, 304, 1152, 1599
LmnI GCTCC 2 cut(s) 799, 1274
Lsp1109I GCAGC 4 cut(s) 452, 1217, 1517, 1526
LweI GCATC 4 cut(s) 131, 224, 510, 1579
MaeI CTAG 7 cut(s) 336, 353, 882, 1064, 1160, 1358, 1403
MaeIII GTNAC 3 cut(s) 89, 97, 1069
MalI GATC 5 cut(s) 264, 285, 306, 1154, 1601
MboI GATC 5 cut(s) 262, 283, 304, 1152, 1599
MboII GAAGA 8 cut(s) 26, 201, 554, 651, 1027, 1281, 1569, 1712
MfeI CAATTG 2 cut(s) 737, 1386
MhlI GDGCHC 1 cut(s) 550
MlsI TGGCCA 2 cut(s) 480, 743
MluNI TGGCCA 2 cut(s) 480, 743
MmeI TCCRAC 1 cut(s) 1342
Mox20I TGGCCA 2 cut(s) 480, 743
MscI TGGCCA 2 cut(s) 480, 743
MseI TTAA 3 cut(s) 75, 926, 963
MslI CAYNNNNRTG 1 cut(s) 209
Msp20I TGGCCA 2 cut(s) 480, 743
MspI CCGG 2 cut(s) 1023, 1641
MspR9I CCNGG 4 cut(s) 322, 486, 1024, 1548
MunI CAATTG 2 cut(s) 737, 1386
Mva1269I GAATGC 1 cut(s) 1046
MvaI CCWGG 3 cut(s) 322, 486, 1548
MwoI GCNNNNNNNGC 6 cut(s) 740, 956, 1318, 1511, 1514, 1654
NciI CCSGG 1 cut(s) 1024
NcoI CCATGG 2 cut(s) 210, 1313
NdeII GATC 5 cut(s) 262, 283, 304, 1152, 1599
NlaIII CATG 8 cut(s) 158, 214, 409, 868, 1042, 1317, 1356, 1444
NlaIV GGNNCC 5 cut(s) 366, 908, 1221, 1383, 1545
NmuCI GTSAC 1 cut(s) 97
NspI RCATGY 1 cut(s) 868
NspV TTCGAA 2 cut(s) 255, 1109
PcsI WCGNNNNNNNCGW 1 cut(s) 252
PctI GAATGC 1 cut(s) 1046
PfeI GAWTC 4 cut(s) 257, 1111, 1117, 1240
PflMI CCANNNNNTGG 1 cut(s) 750
PkrI GCNGC 4 cut(s) 442, 1207, 1507, 1516
PshBI ATTAAT 1 cut(s) 75
Psp6I CCWGG 3 cut(s) 320, 484, 1546
PspGI CCWGG 3 cut(s) 320, 484, 1546
PspN4I GGNNCC 5 cut(s) 366, 908, 1221, 1383, 1545
PspPI GGNCC 4 cut(s) 469, 906, 1219, 1382
PstI CTGCAG 1 cut(s) 1699
RsaI GTAC 2 cut(s) 1349, 1454
RsaNI GTAC 2 cut(s) 1348, 1453
RseI CAYNNNNRTG 1 cut(s) 209
SaqAI TTAA 3 cut(s) 75, 926, 963
SatI GCNGC 4 cut(s) 441, 1206, 1506, 1515
Sau3AI GATC 5 cut(s) 262, 283, 304, 1152, 1599
Sau96I GGNCC 4 cut(s) 469, 906, 1219, 1382
ScrFI CCNGG 4 cut(s) 322, 486, 1024, 1548
SduI GDGCHC 1 cut(s) 550
SfaNI GCATC 4 cut(s) 131, 224, 510, 1579
SfcI CTRYAG 1 cut(s) 1695
SfuI TTCGAA 2 cut(s) 255, 1109
SinI GGWCC 3 cut(s) 469, 906, 1382
SmiMI CAYNNNNRTG 1 cut(s) 209
SmlI CTYRAG 3 cut(s) 287, 779, 1325
SmoI CTYRAG 3 cut(s) 287, 779, 1325
SpeI ACTAGT 1 cut(s) 352
SspMI CTAG 7 cut(s) 336, 353, 882, 1064, 1160, 1358, 1403
StyD4I CCNGG 4 cut(s) 320, 484, 1022, 1546
StyI CCWWGG 5 cut(s) 210, 400, 573, 680, 1313
TaaI ACNGT 3 cut(s) 111, 433, 657
TaqI TCGA 4 cut(s) 246, 255, 1079, 1109
TaqII GACCGA 1 cut(s) 1004
TatI WGTACW 2 cut(s) 1347, 1452
TfiI GAWTC 4 cut(s) 257, 1111, 1117, 1240
Tru1I TTAA 3 cut(s) 75, 926, 963
Tru9I TTAA 3 cut(s) 75, 926, 963
TscAI CASTG 1 cut(s) 481
TseFI GTSAC 1 cut(s) 97
TseI GCWGC 4 cut(s) 440, 1205, 1505, 1514
Tsp45I GTSAC 1 cut(s) 97
TspDTI ATGAA 4 cut(s) 26, 619, 1027, 1457
TspRI CASTG 1 cut(s) 481
Van91I CCANNNNNTGG 1 cut(s) 750
VpaK11BI GGWCC 3 cut(s) 469, 906, 1382
VspI ATTAAT 1 cut(s) 75
XapI RAATTY 3 cut(s) 242, 643, 704
XceI RCATGY 1 cut(s) 868
XcmI CCANNNNNNNNNTGG 2 cut(s) 182, 328
XspI CTAG 7 cut(s) 336, 353, 882, 1064, 1160, 1358, 1403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.