Belongs to the GRAS family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G66770 |
| fragaria_vesca | FvH4_1g13400 |
| malus_domestica | MD02G1148800.v1.1 MD15G1263000.v1.1 |
| prunus_persica | Prupe.7G153700_v2.0.a1 Prupe.7G153700_v2.0.a1 Prupe.7G153700_v2.0.a1 |
| pyrus_communis | pycom02g11720 |
| rosa_chinensis | RchiOBHm_Chr2g0101761 |
| rosa_laevigata | RLG00000017099 |
| rosa_multiflora | Rmu_sc0011183.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00141050 |
| rosa_rugosa | Rorug02G0101900 |
| rosa_samantha | Rh2AG149100 Rh2BG154700 Rh2CG155000 Rh2DG154900 |
| rosa_wichuraiana | Rw2G011650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 743 |
| AccB1I | GGYRCC | 1 cut(s) | 443 |
| AccBSI | CCGCTC | 1 cut(s) | 1058 |
| AccI | GTMKAC | 3 cut(s) | 197, 475, 1023 |
| AccII | CGCG | 7 cut(s) | 317, 741, 786, 1151, 1185, 1454, 1472 |
| AccIII | TCCGGA | 1 cut(s) | 218 |
| AclWI | GGATC | 6 cut(s) | 276, 443, 785, 1006, 1118, 1687 |
| AcoI | YGGCCR | 2 cut(s) | 318, 873 |
| AcsI | RAATTY | 1 cut(s) | 1104 |
| AcuI | CTGAAG | 1 cut(s) | 713 |
| AcvI | CACGTG | 1 cut(s) | 408 |
| AcyI | GRCGYC | 1 cut(s) | 231 |
| AfaI | GTAC | 3 cut(s) | 1316, 1406, 1463 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 169, 170, 192, 1136 |
| AflIII | ACRYGT | 2 cut(s) | 405, 1452 |
| AgsI | TTSAA | 6 cut(s) | 372, 1210, 1349, 1447, 1459, 1736 |
| AjnI | CCWGG | 5 cut(s) | 140, 551, 975, 1079, 1683 |
| AluBI | AGCT | 9 cut(s) | 214, 225, 867, 1198, 1249, 1367, 1537, 1641, 1661 |
| AluI | AGCT | 9 cut(s) | 214, 225, 867, 1198, 1249, 1367, 1537, 1641, 1661 |
| Alw21I | GWGCWC | 1 cut(s) | 1251 |
| Alw26I | GTCTC | 7 cut(s) | 440, 655, 781, 852, 1137, 1325, 1500 |
| AlwI | GGATC | 6 cut(s) | 276, 443, 785, 1006, 1118, 1687 |
| Ama87I | CYCGRG | 3 cut(s) | 190, 469, 1503 |
| Aor13HI | TCCGGA | 1 cut(s) | 218 |
| ApeKI | GCWGC | 7 cut(s) | 67, 70, 79, 91, 112, 417, 628 |
| ApoI | RAATTY | 1 cut(s) | 1104 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1227 |
| AspLEI | GCGC | 7 cut(s) | 125, 317, 682, 713, 743, 1185, 1474 |
| AspS9I | GGNCC | 7 cut(s) | 144, 697, 736, 925, 1045, 1053, 1571 |
| AsuC2I | CCSGG | 7 cut(s) | 246, 715, 734, 1268, 1424, 1584, 1746 |
| AsuHPI | GGTGA | 3 cut(s) | 263, 654, 811 |
| AsuII | TTCGAA | 2 cut(s) | 1221, 1605 |
| AsuNHI | GCTAGC | 1 cut(s) | 718 |
| AvaI | CYCGRG | 3 cut(s) | 190, 469, 1503 |
| AvaII | GGWCC | 2 cut(s) | 736, 1045 |
| BanI | GGYRCC | 1 cut(s) | 443 |
| BanII | GRGCYC | 1 cut(s) | 1251 |
| BauI | CACGAG | 1 cut(s) | 1435 |
| BbrPI | CACGTG | 1 cut(s) | 408 |
| BbsI | GAAGAC | 2 cut(s) | 909, 1614 |
| Bbv12I | GWGCWC | 1 cut(s) | 1251 |
| BbvI | GCAGC | 7 cut(s) | 79, 82, 91, 103, 124, 429, 640 |
| BccI | CCATC | 2 cut(s) | 337, 1627 |
| BceAI | ACGGC | 3 cut(s) | 626, 728, 1356 |
| BciT130I | CCWGG | 5 cut(s) | 142, 553, 977, 1081, 1685 |
| BcnI | CCSGG | 7 cut(s) | 246, 715, 734, 1268, 1424, 1584, 1746 |
| BcoDI | GTCTC | 7 cut(s) | 440, 655, 781, 852, 1137, 1325, 1500 |
| BfaI | CTAG | 2 cut(s) | 719, 1364 |
| BfoI | RGCGCY | 2 cut(s) | 126, 683 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1519 |
| BlpI | GCTNAGC | 1 cut(s) | 45 |
| BmcAI | AGTACT | 1 cut(s) | 1463 |
| Bme18I | GGWCC | 2 cut(s) | 736, 1045 |
| BmeT110I | CYCGRG | 3 cut(s) | 190, 469, 1503 |
| BmgT120I | GGNCC | 7 cut(s) | 144, 697, 736, 925, 1045, 1053, 1571 |
| BmiI | GGNNCC | 7 cut(s) | 243, 287, 445, 1046, 1128, 1491, 1588 |
| BmrI | ACTGGG | 2 cut(s) | 291, 1553 |
| BmsI | GCATC | 1 cut(s) | 1293 |
| BmtI | GCTAGC | 1 cut(s) | 722 |
| BmuI | ACTGGG | 2 cut(s) | 291, 1553 |
| BpiI | GAAGAC | 2 cut(s) | 909, 1614 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 314, 346 |
| BpmI | CTGGAG | 1 cut(s) | 1508 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 45 |
| Bpu14I | TTCGAA | 2 cut(s) | 1221, 1605 |
| BpuEI | CTTGAG | 1 cut(s) | 1438 |
| BpuMI | CCSGG | 7 cut(s) | 246, 715, 734, 1268, 1424, 1584, 1746 |
| BsaAI | YACGTR | 1 cut(s) | 408 |
| BsaHI | GRCGYC | 1 cut(s) | 231 |
| BsaI | GGTCTC | 3 cut(s) | 440, 655, 781 |
| BsaJI | CCNNGG | 8 cut(s) | 140, 245, 784, 1039, 1071, 1149, 1287, 1745 |
| BsaWI | WCCGGW | 7 cut(s) | 218, 288, 664, 1088, 1237, 1276, 1643 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 233, 263, 547, 577, 659, 689 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 169, 170, 192, 1136 |
| Bse118I | RCCGGY | 6 cut(s) | 115, 185, 233, 1123, 1440, 1654 |
| Bse1I | ACTGG | 4 cut(s) | 286, 541, 1174, 1548 |
| Bse3DI | GCAATG | 2 cut(s) | 427, 1625 |
| BseAI | TCCGGA | 1 cut(s) | 218 |
| BseBI | CCWGG | 5 cut(s) | 142, 553, 977, 1081, 1685 |
| BseDI | CCNNGG | 8 cut(s) | 140, 245, 784, 1039, 1071, 1149, 1287, 1745 |
| BseGI | GGATG | 1 cut(s) | 348 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 169, 170, 192, 1136 |
| BseMI | GCAATG | 2 cut(s) | 427, 1625 |
| BseMII | CTCAG | 5 cut(s) | 59, 493, 548, 778, 792 |
| BseNI | ACTGG | 4 cut(s) | 286, 541, 1174, 1548 |
| BseRI | GAGGAG | 2 cut(s) | 555, 612 |
| BseX3I | CGGCCG | 1 cut(s) | 318 |
| BseXI | GCAGC | 7 cut(s) | 79, 82, 91, 103, 124, 429, 640 |
| BseYI | CCCAGC | 1 cut(s) | 1097 |
| BsgI | GTGCAG | 1 cut(s) | 36 |
| Bsh1236I | CGCG | 7 cut(s) | 317, 741, 786, 1151, 1185, 1454, 1472 |
| Bsh1285I | CGRYCG | 2 cut(s) | 120, 321 |
| BshNI | GGYRCC | 1 cut(s) | 443 |
| BsiEI | CGRYCG | 2 cut(s) | 120, 321 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1251 |
| BsiHKCI | CYCGRG | 3 cut(s) | 190, 469, 1503 |
| BslFI | GGGAC | 1 cut(s) | 1153 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 169, 170, 192, 1136 |
| BsmAI | GTCTC | 7 cut(s) | 440, 655, 781, 852, 1137, 1325, 1500 |
| BsmBI | CGTCTC | 2 cut(s) | 852, 1137 |
| BsmFI | GGGAC | 1 cut(s) | 1153 |
| Bso31I | GGTCTC | 3 cut(s) | 440, 655, 781 |
| BsoBI | CYCGRG | 3 cut(s) | 190, 469, 1503 |
| Bsp119I | TTCGAA | 2 cut(s) | 1221, 1605 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1251 |
| Bsp13I | TCCGGA | 1 cut(s) | 218 |
| Bsp1407I | TGTACA | 1 cut(s) | 1314 |
| Bsp143I | GATC | 8 cut(s) | 268, 448, 505, 669, 790, 1011, 1110, 1692 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 45 |
| BspCNI | CTCAG | 5 cut(s) | 58, 492, 547, 777, 791 |
| BspEI | TCCGGA | 1 cut(s) | 218 |
| BspFNI | CGCG | 7 cut(s) | 317, 741, 786, 1151, 1185, 1454, 1472 |
| BspHI | TCATGA | 1 cut(s) | 1243 |
| BspLI | GGNNCC | 7 cut(s) | 243, 287, 445, 1046, 1128, 1491, 1588 |
| BspOI | GCTAGC | 1 cut(s) | 722 |
| BspPI | GGATC | 6 cut(s) | 276, 443, 785, 1006, 1118, 1687 |
| BspT104I | TTCGAA | 2 cut(s) | 1221, 1605 |
| BspT107I | GGYRCC | 1 cut(s) | 443 |
| BspTNI | GGTCTC | 3 cut(s) | 440, 655, 781 |
| BsrBI | CCGCTC | 1 cut(s) | 1058 |
| BsrDI | GCAATG | 2 cut(s) | 427, 1625 |
| BsrFI | RCCGGY | 6 cut(s) | 115, 185, 233, 1123, 1440, 1654 |
| BsrGI | TGTACA | 1 cut(s) | 1314 |
| BsrI | ACTGG | 4 cut(s) | 286, 541, 1174, 1548 |
| BssAI | RCCGGY | 6 cut(s) | 115, 185, 233, 1123, 1440, 1654 |
| BssECI | CCNNGG | 8 cut(s) | 140, 245, 784, 1039, 1071, 1149, 1287, 1745 |
| BssMI | GATC | 8 cut(s) | 268, 448, 505, 669, 790, 1011, 1110, 1692 |
| BssNAI | GTATAC | 1 cut(s) | 198 |
| BssNI | GRCGYC | 1 cut(s) | 231 |
| BssSI | CACGAG | 1 cut(s) | 1435 |
| BssT1I | CCWWGG | 3 cut(s) | 1039, 1071, 1287 |
| Bst1107I | GTATAC | 1 cut(s) | 198 |
| Bst2BI | CACGAG | 1 cut(s) | 1435 |
| Bst2UI | CCWGG | 5 cut(s) | 142, 553, 977, 1081, 1685 |
| Bst4CI | ACNGT | 5 cut(s) | 23, 443, 501, 1602, 1789 |
| BstACI | GRCGYC | 1 cut(s) | 231 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 489 |
| BstAUI | TGTACA | 1 cut(s) | 1314 |
| BstBAI | YACGTR | 1 cut(s) | 408 |
| BstBI | TTCGAA | 2 cut(s) | 1221, 1605 |
| BstC8I | GCNNGC | 7 cut(s) | 235, 400, 549, 720, 898, 940, 1068 |
| BstDEI | CTNAG | 6 cut(s) | 45, 479, 534, 764, 778, 1664 |
| BstDSI | CCRYGG | 2 cut(s) | 784, 1149 |
| BstEII | GGTNACC | 1 cut(s) | 660 |
| BstF5I | GGATG | 1 cut(s) | 348 |
| BstFNI | CGCG | 7 cut(s) | 317, 741, 786, 1151, 1185, 1454, 1472 |
| BstH2I | RGCGCY | 2 cut(s) | 126, 683 |
| BstHHI | GCGC | 7 cut(s) | 125, 317, 682, 713, 743, 1185, 1474 |
| BstKTI | GATC | 8 cut(s) | 271, 451, 508, 672, 793, 1014, 1113, 1695 |
| BstMAI | GTCTC | 7 cut(s) | 440, 655, 781, 852, 1137, 1325, 1500 |
| BstMBI | GATC | 8 cut(s) | 268, 448, 505, 669, 790, 1011, 1110, 1692 |
| BstMCI | CGRYCG | 2 cut(s) | 120, 321 |
| BstNI | CCWGG | 5 cut(s) | 142, 553, 977, 1081, 1685 |
| BstNSI | RCATGY | 1 cut(s) | 590 |
| BstPI | GGTNACC | 1 cut(s) | 660 |
| BstUI | CGCG | 7 cut(s) | 317, 741, 786, 1151, 1185, 1454, 1472 |
| BstV1I | GCAGC | 7 cut(s) | 79, 82, 91, 103, 124, 429, 640 |
| BstV2I | GAAGAC | 2 cut(s) | 909, 1614 |
| BstX2I | RGATCY | 4 cut(s) | 790, 1011, 1110, 1692 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 281, 1201 |
| BstYI | RGATCY | 4 cut(s) | 790, 1011, 1110, 1692 |
| BstZ17I | GTATAC | 1 cut(s) | 198 |
| BstZI | CGGCCG | 1 cut(s) | 318 |
| BtgI | CCRYGG | 2 cut(s) | 784, 1149 |
| BtsCI | GGATG | 1 cut(s) | 348 |
| BtsI | GCAGTG | 2 cut(s) | 891, 1683 |
| BtsIMutI | CAGTG | 6 cut(s) | 28, 279, 752, 891, 1683, 1785 |
| Cac8I | GCNNGC | 7 cut(s) | 235, 400, 549, 720, 898, 940, 1068 |
| CciI | TCATGA | 1 cut(s) | 1243 |
| CfoI | GCGC | 7 cut(s) | 125, 317, 682, 713, 743, 1185, 1474 |
| Cfr10I | RCCGGY | 6 cut(s) | 115, 185, 233, 1123, 1440, 1654 |
| Cfr13I | GGNCC | 7 cut(s) | 144, 697, 736, 925, 1045, 1053, 1571 |
| Cfr42I | CCGCGG | 2 cut(s) | 787, 1152 |
| CpoI | CGGWCCG | 1 cut(s) | 736 |
| CseI | GACGC | 2 cut(s) | 239, 944 |
| CsiI | ACCWGGT | 1 cut(s) | 1079 |
| Csp6I | GTAC | 3 cut(s) | 1315, 1405, 1462 |
| CspI | CGGWCCG | 1 cut(s) | 736 |
| CviAII | CATG | 5 cut(s) | 413, 587, 1244, 1498, 1797 |
| CviQI | GTAC | 3 cut(s) | 1315, 1405, 1462 |
| DdeI | CTNAG | 6 cut(s) | 45, 479, 534, 764, 778, 1664 |
| DpnI | GATC | 8 cut(s) | 270, 450, 507, 671, 792, 1013, 1112, 1694 |
| DpnII | GATC | 8 cut(s) | 268, 448, 505, 669, 790, 1011, 1110, 1692 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 743 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 743 |
| EaeI | YGGCCR | 2 cut(s) | 318, 873 |
| EagI | CGGCCG | 1 cut(s) | 318 |
| EciI | GGCGGA | 1 cut(s) | 558 |
| Ecl136II | GAGCTC | 1 cut(s) | 1249 |
| EclXI | CGGCCG | 1 cut(s) | 318 |
| Eco130I | CCWWGG | 3 cut(s) | 1039, 1071, 1287 |
| Eco147I | AGGCCT | 2 cut(s) | 1070, 1286 |
| Eco24I | GRGCYC | 1 cut(s) | 1251 |
| Eco31I | GGTCTC | 3 cut(s) | 440, 655, 781 |
| Eco47I | GGWCC | 2 cut(s) | 736, 1045 |
| Eco52I | CGGCCG | 1 cut(s) | 318 |
| Eco53kI | GAGCTC | 1 cut(s) | 1249 |
| Eco57I | CTGAAG | 1 cut(s) | 713 |
| Eco72I | CACGTG | 1 cut(s) | 408 |
| Eco88I | CYCGRG | 3 cut(s) | 190, 469, 1503 |
| Eco91I | GGTNACC | 1 cut(s) | 660 |
| EcoICRI | GAGCTC | 1 cut(s) | 1249 |
| EcoO109I | RGGNCCY | 2 cut(s) | 697, 925 |
| EcoO65I | GGTNACC | 1 cut(s) | 660 |
| EcoRI | GAATTC | 1 cut(s) | 1104 |
| EcoRII | CCWGG | 5 cut(s) | 140, 551, 975, 1079, 1683 |
| EcoT14I | CCWWGG | 3 cut(s) | 1039, 1071, 1287 |
| EcoT38I | GRGCYC | 1 cut(s) | 1251 |
| ErhI | CCWWGG | 3 cut(s) | 1039, 1071, 1287 |
| Esp3I | CGTCTC | 2 cut(s) | 852, 1137 |
| FaeI | CATG | 5 cut(s) | 416, 590, 1247, 1501, 1800 |
| FaqI | GGGAC | 1 cut(s) | 1153 |
| FatI | CATG | 5 cut(s) | 412, 586, 1243, 1497, 1796 |
| FauI | CCCGC | 2 cut(s) | 230, 1156 |
| FblI | GTMKAC | 3 cut(s) | 197, 475, 1023 |
| FokI | GGATG | 1 cut(s) | 355 |
| FriOI | GRGCYC | 1 cut(s) | 1251 |
| FspBI | CTAG | 2 cut(s) | 719, 1364 |
| GlaI | GCGC | 7 cut(s) | 124, 316, 681, 712, 742, 1184, 1473 |
| GsaI | CCCAGC | 1 cut(s) | 1101 |
| GsuI | CTGGAG | 1 cut(s) | 1508 |
| HaeII | RGCGCY | 2 cut(s) | 126, 683 |
| HgaI | GACGC | 2 cut(s) | 239, 944 |
| HhaI | GCGC | 7 cut(s) | 125, 317, 682, 713, 743, 1185, 1474 |
| Hin1I | GRCGYC | 1 cut(s) | 231 |
| Hin1II | CATG | 5 cut(s) | 416, 590, 1247, 1501, 1800 |
| Hin6I | GCGC | 7 cut(s) | 123, 315, 680, 711, 741, 1183, 1472 |
| HinP1I | GCGC | 7 cut(s) | 123, 315, 680, 711, 741, 1183, 1472 |
| HincII | GTYRAC | 3 cut(s) | 476, 1024, 1086 |
| HindII | GTYRAC | 3 cut(s) | 476, 1024, 1086 |
| HindIII | AAGCTT | 3 cut(s) | 865, 1196, 1535 |
| HphI | GGTGA | 3 cut(s) | 263, 654, 811 |
| Hpy166II | GTNNAC | 7 cut(s) | 198, 476, 1024, 1086, 1297, 1434, 1785 |
| Hpy188III | TCNNGA | 6 cut(s) | 219, 986, 1202, 1244, 1435, 1447 |
| Hpy8I | GTNNAC | 7 cut(s) | 198, 476, 1024, 1086, 1297, 1434, 1785 |
| Hpy99I | CGWCG | 6 cut(s) | 647, 938, 997, 1009, 1256, 1554 |
| HpyAV | CCTTC | 1 cut(s) | 688 |
| HpyCH4III | ACNGT | 5 cut(s) | 23, 443, 501, 1602, 1789 |
| HpyCH4IV | ACGT | 1 cut(s) | 407 |
| HpyCH4V | TGCA | 4 cut(s) | 17, 832, 853, 1066 |
| HpyF3I | CTNAG | 6 cut(s) | 45, 479, 534, 764, 778, 1664 |
| HpySE526I | ACGT | 1 cut(s) | 407 |
| Hsp92I | GRCGYC | 1 cut(s) | 231 |
| Hsp92II | CATG | 5 cut(s) | 416, 590, 1247, 1501, 1800 |
| HspAI | GCGC | 7 cut(s) | 123, 315, 680, 711, 741, 1183, 1472 |
| Kpn2I | TCCGGA | 1 cut(s) | 218 |
| KroI | GCCGGC | 1 cut(s) | 233 |
| KroNI | GCCGGC | 1 cut(s) | 235 |
| KspI | CCGCGG | 2 cut(s) | 787, 1152 |
| Kzo9I | GATC | 8 cut(s) | 268, 448, 505, 669, 790, 1011, 1110, 1692 |
| LmnI | GCTCC | 8 cut(s) | 76, 241, 497, 1132, 1311, 1489, 1576, 1646 |
| Lsp1109I | GCAGC | 7 cut(s) | 79, 82, 91, 103, 124, 429, 640 |
| LweI | GCATC | 1 cut(s) | 1293 |
| MabI | ACCWGGT | 1 cut(s) | 1079 |
| MaeI | CTAG | 2 cut(s) | 719, 1364 |
| MaeII | ACGT | 1 cut(s) | 407 |
| MaeIII | GTNAC | 2 cut(s) | 660, 1390 |
| MalI | GATC | 8 cut(s) | 270, 450, 507, 671, 792, 1013, 1112, 1694 |
| MbiI | CCGCTC | 1 cut(s) | 1058 |
| MboI | GATC | 8 cut(s) | 268, 448, 505, 669, 790, 1011, 1110, 1692 |
| MboII | GAAGA | 5 cut(s) | 514, 914, 1021, 1396, 1619 |
| MfeI | CAATTG | 1 cut(s) | 1310 |
| MflI | RGATCY | 4 cut(s) | 790, 1011, 1110, 1692 |
| MhlI | GDGCHC | 1 cut(s) | 1251 |
| MluCI | AATT | 7 cut(s) | 166, 1104, 1205, 1310, 1554, 1714, 1731 |
| MluI | ACGCGT | 1 cut(s) | 1452 |
| MmeI | TCCRAC | 4 cut(s) | 481, 753, 818, 1361 |
| MnlI | CCTC | 9 cut(s) | 403, 573, 576, 630, 633, 1165, 1276, 1512, 1788 |
| MreI | CGCCGGCG | 1 cut(s) | 233 |
| MroI | TCCGGA | 1 cut(s) | 218 |
| MroNI | GCCGGC | 1 cut(s) | 233 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1227 |
| MseI | TTAA | 3 cut(s) | 182, 1524, 1804 |
| MslI | CAYNNNNRTG | 1 cut(s) | 10 |
| MspA1I | CMGCKG | 2 cut(s) | 786, 1151 |
| MunI | CAATTG | 1 cut(s) | 1310 |
| MvaI | CCWGG | 5 cut(s) | 142, 553, 977, 1081, 1685 |
| MvnI | CGCG | 7 cut(s) | 317, 741, 786, 1151, 1185, 1454, 1472 |
| NaeI | GCCGGC | 1 cut(s) | 235 |
| NciI | CCSGG | 7 cut(s) | 246, 715, 734, 1268, 1424, 1584, 1746 |
| NdeII | GATC | 8 cut(s) | 268, 448, 505, 669, 790, 1011, 1110, 1692 |
| NgoMIV | GCCGGC | 1 cut(s) | 233 |
| NheI | GCTAGC | 1 cut(s) | 718 |
| NlaIII | CATG | 5 cut(s) | 416, 590, 1247, 1501, 1800 |
| NlaIV | GGNNCC | 7 cut(s) | 243, 287, 445, 1046, 1128, 1491, 1588 |
| NmeAIII | GCCGAG | 2 cut(s) | 346, 748 |
| NmuCI | GTSAC | 2 cut(s) | 660, 1390 |
| NspI | RCATGY | 1 cut(s) | 590 |
| NspV | TTCGAA | 2 cut(s) | 1221, 1605 |
| PagI | TCATGA | 1 cut(s) | 1243 |
| PceI | AGGCCT | 2 cut(s) | 1070, 1286 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 333, 1001, 1379, 1490 |
| PdiI | GCCGGC | 1 cut(s) | 235 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1227 |
| PfeI | GAWTC | 6 cut(s) | 368, 757, 770, 1032, 1228, 1736 |
| PflFI | GACNNNGTC | 1 cut(s) | 1081 |
| PmaCI | CACGTG | 1 cut(s) | 408 |
| PmlI | CACGTG | 1 cut(s) | 408 |
| Ppu21I | YACGTR | 1 cut(s) | 408 |
| Psp124BI | GAGCTC | 1 cut(s) | 1251 |
| Psp6I | CCWGG | 5 cut(s) | 140, 551, 975, 1079, 1683 |
| PspCI | CACGTG | 1 cut(s) | 408 |
| PspEI | GGTNACC | 1 cut(s) | 660 |
| PspFI | CCCAGC | 1 cut(s) | 1097 |
| PspGI | CCWGG | 5 cut(s) | 140, 551, 975, 1079, 1683 |
| PspN4I | GGNNCC | 7 cut(s) | 243, 287, 445, 1046, 1128, 1491, 1588 |
| PspPI | GGNCC | 7 cut(s) | 144, 697, 736, 925, 1045, 1053, 1571 |
| PsuI | RGATCY | 4 cut(s) | 790, 1011, 1110, 1692 |
| PsyI | GACNNNGTC | 1 cut(s) | 1081 |
| RsaI | GTAC | 3 cut(s) | 1316, 1406, 1463 |
| RsaNI | GTAC | 3 cut(s) | 1315, 1405, 1462 |
| RseI | CAYNNNNRTG | 1 cut(s) | 10 |
| Rsr2I | CGGWCCG | 1 cut(s) | 736 |
| RsrII | CGGWCCG | 1 cut(s) | 736 |
| SacI | GAGCTC | 1 cut(s) | 1251 |
| SacII | CCGCGG | 2 cut(s) | 787, 1152 |
| SalI | GTCGAC | 2 cut(s) | 474, 1022 |
| SaqAI | TTAA | 3 cut(s) | 182, 1524, 1804 |
| Sau3AI | GATC | 8 cut(s) | 268, 448, 505, 669, 790, 1011, 1110, 1692 |
| Sau96I | GGNCC | 7 cut(s) | 144, 697, 736, 925, 1045, 1053, 1571 |
| ScaI | AGTACT | 1 cut(s) | 1463 |
| SduI | GDGCHC | 1 cut(s) | 1251 |
| SexAI | ACCWGGT | 1 cut(s) | 1079 |
| SfaNI | GCATC | 1 cut(s) | 1293 |
| Sfr303I | CCGCGG | 2 cut(s) | 787, 1152 |
| SfuI | TTCGAA | 2 cut(s) | 1221, 1605 |
| SgrAI | CRCCGGYG | 1 cut(s) | 233 |
| SgrBI | CCGCGG | 2 cut(s) | 787, 1152 |
| SinI | GGWCC | 2 cut(s) | 736, 1045 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 10 |
| SmlI | CTYRAG | 1 cut(s) | 1417 |
| SmoI | CTYRAG | 1 cut(s) | 1417 |
| Sse9I | AATT | 7 cut(s) | 166, 1104, 1205, 1310, 1554, 1714, 1731 |
| SseBI | AGGCCT | 2 cut(s) | 1070, 1286 |
| SspMI | CTAG | 2 cut(s) | 719, 1364 |
| SstI | GAGCTC | 1 cut(s) | 1251 |
| StuI | AGGCCT | 2 cut(s) | 1070, 1286 |
| StyI | CCWWGG | 3 cut(s) | 1039, 1071, 1287 |
| TaaI | ACNGT | 5 cut(s) | 23, 443, 501, 1602, 1789 |
| TaiI | ACGT | 1 cut(s) | 410 |
| TaqII | GACCGA | 2 cut(s) | 422, 763 |
| TasI | AATT | 7 cut(s) | 166, 1104, 1205, 1310, 1554, 1714, 1731 |
| TatI | WGTACW | 2 cut(s) | 1314, 1461 |
| TauI | GCSGC | 9 cut(s) | 309, 320, 574, 685, 688, 875, 1058, 1154, 1563 |
| TfiI | GAWTC | 6 cut(s) | 368, 757, 770, 1032, 1228, 1736 |
| Tru1I | TTAA | 3 cut(s) | 182, 1524, 1804 |
| Tru9I | TTAA | 3 cut(s) | 182, 1524, 1804 |
| TscAI | CASTG | 6 cut(s) | 28, 286, 759, 898, 1683, 1792 |
| TseFI | GTSAC | 2 cut(s) | 660, 1390 |
| TseI | GCWGC | 7 cut(s) | 67, 70, 79, 91, 112, 417, 628 |
| Tsp45I | GTSAC | 2 cut(s) | 660, 1390 |
| TspDTI | ATGAA | 2 cut(s) | 1232, 1782 |
| TspGWI | ACGGA | 5 cut(s) | 192, 243, 389, 1010, 1119 |
| TspRI | CASTG | 6 cut(s) | 28, 286, 759, 898, 1683, 1792 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1081 |
| VpaK11BI | GGWCC | 2 cut(s) | 736, 1045 |
| XapI | RAATTY | 1 cut(s) | 1104 |
| XceI | RCATGY | 1 cut(s) | 590 |
| XmiI | GTMKAC | 3 cut(s) | 197, 475, 1023 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1227 |
| XspI | CTAG | 2 cut(s) | 719, 1364 |
| ZrmI | AGTACT | 1 cut(s) | 1463 |