Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0013337

Physical Location & Seq

Genomic Coordinates Reverse (-)

12932229 .. 12936159

Gene Structure 3931 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG154900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGGCTTACATGTGTACAGACAGCGGGAATCTAATGGCGATTGCTCAGCAAGTCATCAAACAAAAGCAGCAGCAAGAGCAACAGCAGCAGCAGCACTCCCACCACCACCACCAGCAGCTCACTTCGGCGTTCTCTCTCTCCTCTGCTCCATGGCCCACCAACACTCATCACGCTCCGAGTTTGGGGTACGCGTTGGGGGGTTCGAGTTTTTCCGACCCGTTTCAGCTGCCCGGGAGCTCCGACACGACGGTCGGGGAGCCCGGGTTTCCGTTCCCGAACATGGATCATCATCCGACCAGCAGTGGGTTCAGGTTCTCGGATTTGGGCGGAGCGGCCGAGTTCGACTCGGACGAGTGGATGGACAGTATAATAGGCGGTGGGGATTCAACGGATAGTTCGAACCTGCCCTCTGTGTGCGACGCGTGGCAGAACAATGCCGCGGATTTCGGTCTCTACGCCTCCGATCCCTTCGCTCCCTGCCCGAGTCGACTCAGCGCTCCGTGCTCTTCGCCGTCCGATCTCAACCGAGTCATATACTCCGACGTTCACAACCAGAAAACCGCCAACCTCCAACCTCAGTTGCCGCCAGCGTGGACCCCGCCTCCGCCTCCGCCTCAGCCGCCGCAGCAGCAGCCTTCCTCAATTGCCGTCAAAGACGCCAAATCAGCCAACCCTACTCCTCAAAACAACGACGCCGTCGGAGTGTCCTCCAGGTCGCCGGAGATTGAATCGGCGCCGCCGGTACTGAAAGCCTTACTCGACTGCGCCAGAGTCATCGAGTCCGAACCGGAGCGTGCGATCAAATCGCTGGTCCGGCTCAGAGAGTCCGTCTCCGAGCACGGAGATCCAACCGAGCGAGTTGCTTTCCACTTCACTGACGCTCTGTACAGCCGAGTCTCTCCGCCGCAACCGGAGAAAAGCTCCGCCTCGTACGACGCTAGCTGCGAAGAAGACTTCACTCTCTCTTATAAGGCCTTGAACGACGCTTGCCCTTACTCCAAGTTTGCTCACTTGACGGCGAACCAGGCCATCCTCGAAGCGACGGAGAGGGCGACGAAGATTCACATAGTCGACTTCGGGATAGTGCAAGGAGTCCAATGGGCCGCCCTATTGCAGGCTTTGGCTACCCGGTCCACCGGAAAGCCCAGTAAAATTCGGATCTCCGGTATACCCGCTCCGTCTCTGGGGAACTCTCCGGCGGCGTCGCTTTTCGCTACTGGAAATAGACTGGGTGAATTTGCAAAGCTTCTGGAGCTGAATTTCGTGTTTGAACCGGTGCTGACTCCGATTCAGGAGCTTAACGAGTCGTGCTTTCGGGTCGACCCGGATGAGTTCTTGGCGGTGAACTTAATGCTCCAGCTGCACAACCTCCTCGACGAATCAACCACCGGAGTTGAAGCGGCTCTGAGACTGGCCAAGTCGCTGAACCCGAAGATTGTGACCCTGGGCGAGTATGAAGCGAAATTGAACCGGGTCGGGTTCATGAGCCGGTTCAAGACCGCATTGAAGTACTACACAGCAATGTTTGAGTCACTTGAACCGAACATGACCCGAGACTCGCCGGAGAGGCTGCAGGTGGAGAGGCTTTTGCTGGGCCGGAGAATTGCTGGCGGGGTCGGCCCAGAGGAACCGGGAACGAAACGACAGCGTTTAGAGGACAAAGAGCAGTGGAAGTTTTTGATGGAAAGCTCTGGTTTTGAGCCAGTAACTCTTAGCCATTACGCAGTGAGCCAGGCCAGGATTCTTCTCTGGAACTATAGTAATGCTTCGTATTCGCTAATCGAATCTCCACCTGGGTTTCTCTCTTTGGCGTGGAAGGAAGTCCCTCTGTTTACTGTTTCTTCATGGCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

617

Amino Acids

67.62

Weight (kDa)

5.39

Isoelectric Point (pI)

60.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	250 - 617	8.5e-108	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66770
fragaria_vesca	FvH4_1g13400
malus_domestica	MD02G1148800.v1.1 MD15G1263000.v1.1
prunus_persica	Prupe.7G153700_v2.0.a1 Prupe.7G153700_v2.0.a1 Prupe.7G153700_v2.0.a1
pyrus_communis	pycom02g11720
rosa_chinensis	RchiOBHm_Chr2g0101761
rosa_laevigata	RLG00000017099
rosa_multiflora	Rmu_sc0011183.1_g000004
rosa_roxburghii	Rroxscaffold_2G00141050
rosa_rugosa	Rorug02G0101900
rosa_samantha	Rh2AG149100 Rh2BG154700 Rh2CG155000 Rh2DG154900
rosa_wichuraiana	Rw2G011650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	969
AarI	CACCTGC	1 cut(s)	1564
AasI	GACNNNNNNGTC	1 cut(s)	248
Acc36I	ACCTGC	2 cut(s)	411, 1564
AccB1I	GGYRCC	1 cut(s)	733
AccBSI	CCGCTC	2 cut(s)	332, 1175
AccI	GTMKAC	4 cut(s)	487, 1071, 1168, 1320
AccII	CGCG	3 cut(s)	191, 422, 440
AclWI	GGATC	4 cut(s)	291, 458, 839, 1166
AcoI	YGGCCR	2 cut(s)	333, 1413
AcsI	RAATTY	3 cut(s)	1152, 1235, 1258
AcyI	GRCGYC	4 cut(s)	657, 693, 734, 1202
AfaI	GTAC	6 cut(s)	16, 188, 744, 887, 932, 1511
AfeI	AGCGCT	1 cut(s)	496
AfiI	CCNNNNNNNGG	5 cut(s)	182, 280, 303, 1114, 1184
AflIII	ACRYGT	3 cut(s)	9, 189, 420
AgeI	ACCGGT	1 cut(s)	1273
AgsI	TTSAA	9 cut(s)	387, 728, 979, 1271, 1397, 1468, 1495, 1507, 1538
AjnI	CCWGG	6 cut(s)	710, 1023, 1443, 1731, 1736, 1792
Alw21I	GWGCWC	3 cut(s)	239, 506, 840
Alw26I	GTCTC	6 cut(s)	455, 835, 901, 1185, 1402, 1548
AlwI	GGATC	4 cut(s)	291, 458, 839, 1166
Ama87I	CYCGRG	4 cut(s)	230, 260, 481, 1551
Aor51HI	AGCGCT	1 cut(s)	496
AoxI	GGCC	9 cut(s)	152, 333, 972, 1026, 1101, 1413, 1594, 1618, 1734
ApoI	RAATTY	3 cut(s)	1152, 1235, 1258
ArsI	GACNNNNNNTTYG	2 cut(s)	795, 827
AsiGI	ACCGGT	1 cut(s)	1273
AspLEI	GCGC	3 cut(s)	497, 736, 767
AspS9I	GGNCC	7 cut(s)	153, 594, 811, 1101, 1131, 1594, 1619
AsuC2I	CCSGG	8 cut(s)	231, 232, 261, 262, 1129, 1325, 1472, 1632
AsuHPI	GGTGA	2 cut(s)	1244, 1354
AsuII	TTCGAA	1 cut(s)	398
AsuNHI	GCTAGC	1 cut(s)	938
AvaI	CYCGRG	4 cut(s)	230, 260, 481, 1551
AvaII	GGWCC	3 cut(s)	594, 811, 1131
BalI	TGGCCA	1 cut(s)	1415
BanI	GGYRCC	1 cut(s)	733
BanII	GRGCYC	2 cut(s)	239, 261
BbsI	GAAGAC	1 cut(s)	957
Bbv12I	GWGCWC	3 cut(s)	239, 506, 840
BbvCI	CCTCAGC	1 cut(s)	615
BccI	CCATC	3 cut(s)	352, 1037, 1675
BceAI	ACGGC	4 cut(s)	496, 632, 680, 1032
BcgI	CGANNNNNNTGC	2 cut(s)	842, 876
BciT130I	CCWGG	6 cut(s)	712, 1025, 1445, 1733, 1738, 1794
BcnI	CCSGG	8 cut(s)	231, 232, 261, 262, 1129, 1325, 1472, 1632
BcoDI	GTCTC	6 cut(s)	455, 835, 901, 1185, 1402, 1548
BfaI	CTAG	1 cut(s)	939
BfmI	CTRYAG	2 cut(s)	1571, 1756
BfoI	RGCGCY	2 cut(s)	498, 737
BfuAI	ACCTGC	2 cut(s)	411, 1564
BglI	GCCNNNNNGGC	1 cut(s)	1567
BlpI	GCTNAGC	1 cut(s)	45
BmcAI	AGTACT	1 cut(s)	1511
Bme18I	GGWCC	3 cut(s)	594, 811, 1131
BmeT110I	CYCGRG	4 cut(s)	230, 260, 481, 1551
BmgT120I	GGNCC	7 cut(s)	153, 594, 811, 1101, 1131, 1594, 1619
BmiI	GGNNCC	4 cut(s)	258, 596, 735, 1629
BmrI	ACTGGG	2 cut(s)	1140, 1238
BmtI	GCTAGC	1 cut(s)	942
BmuI	ACTGGG	2 cut(s)	1140, 1238
BpiI	GAAGAC	1 cut(s)	957
BplI	GAGNNNNNCTC	6 cut(s)	329, 361, 815, 847, 905, 937
BpmI	CTGGAG	3 cut(s)	694, 1271, 1340
Bpu10I	CCTNAGC	1 cut(s)	615
Bpu1102I	GCTNAGC	1 cut(s)	45
Bpu14I	TTCGAA	1 cut(s)	398
BpuMI	CCSGG	8 cut(s)	231, 232, 261, 262, 1129, 1325, 1472, 1632
BsaBI	GATNNNNATC	1 cut(s)	288
BsaHI	GRCGYC	4 cut(s)	657, 693, 734, 1202
BsaI	GGTCTC	1 cut(s)	455
BsaJI	CCNNGG	7 cut(s)	149, 230, 260, 438, 1443, 1444, 1793
BsaWI	WCCGGW	6 cut(s)	787, 910, 1136, 1163, 1273, 1388
BsaXI	ACNNNNNCTCC	4 cut(s)	248, 278, 586, 616
Bsc4I	CCNNNNNNNGG	5 cut(s)	182, 280, 303, 1114, 1184
Bse118I	RCCGGY	3 cut(s)	739, 1273, 1488
Bse1I	ACTGG	5 cut(s)	1146, 1222, 1233, 1416, 1703
Bse3DI	GCAATG	1 cut(s)	1527
Bse8I	GATNNNNATC	1 cut(s)	288
BseBI	CCWGG	6 cut(s)	712, 1025, 1445, 1733, 1738, 1794
BseDI	CCNNGG	7 cut(s)	149, 230, 260, 438, 1443, 1444, 1793
BseGI	GGATG	4 cut(s)	289, 363, 1029, 1333
BseJI	GATNNNNATC	1 cut(s)	288
BseLI	CCNNNNNNNGG	5 cut(s)	182, 280, 303, 1114, 1184
BseMI	GCAATG	1 cut(s)	1527
BseMII	CTCAG	6 cut(s)	59, 505, 590, 629, 832, 1397
BseNI	ACTGG	5 cut(s)	1146, 1222, 1233, 1416, 1703
BseRI	GAGGAG	3 cut(s)	130, 669, 1361
BseX3I	CGGCCG	1 cut(s)	333
BseYI	CCCAGC	1 cut(s)	1591
BsgI	GTGCAG	1 cut(s)	1346
Bsh1236I	CGCG	3 cut(s)	191, 422, 440
Bsh1285I	CGRYCG	2 cut(s)	252, 336
BshFI	GGCC	9 cut(s)	154, 335, 974, 1028, 1103, 1415, 1596, 1620, 1736
BshNI	GGYRCC	1 cut(s)	733
BshTI	ACCGGT	1 cut(s)	1273
BsiEI	CGRYCG	2 cut(s)	252, 336
BsiHKAI	GWGCWC	3 cut(s)	239, 506, 840
BsiHKCI	CYCGRG	4 cut(s)	230, 260, 481, 1551
BsiWI	CGTACG	1 cut(s)	930
BslFI	GGGAC	1 cut(s)	1808
BslI	CCNNNNNNNGG	5 cut(s)	182, 280, 303, 1114, 1184
BsmAI	GTCTC	6 cut(s)	455, 835, 901, 1185, 1402, 1548
BsmBI	CGTCTC	2 cut(s)	835, 1185
BsmFI	GGGAC	1 cut(s)	1808
BsnI	GGCC	9 cut(s)	154, 335, 974, 1028, 1103, 1415, 1596, 1620, 1736
Bso31I	GGTCTC	1 cut(s)	455
BsoBI	CYCGRG	4 cut(s)	230, 260, 481, 1551
Bsp119I	TTCGAA	1 cut(s)	398
Bsp1286I	GDGCHC	4 cut(s)	239, 261, 506, 840
Bsp1407I	TGTACA	2 cut(s)	14, 885
Bsp143I	GATC	6 cut(s)	283, 463, 517, 798, 844, 1158
Bsp1720I	GCTNAGC	1 cut(s)	45
Bsp19I	CCATGG	1 cut(s)	149
BspANI	GGCC	9 cut(s)	154, 335, 974, 1028, 1103, 1415, 1596, 1620, 1736
BspCNI	CTCAG	6 cut(s)	58, 504, 589, 628, 831, 1398
BspFNI	CGCG	3 cut(s)	191, 422, 440
BspHI	TCATGA	1 cut(s)	1482
BspLI	GGNNCC	4 cut(s)	258, 596, 735, 1629
BspMAI	CTGCAG	1 cut(s)	1575
BspMI	ACCTGC	2 cut(s)	411, 1564
BspOI	GCTAGC	1 cut(s)	942
BspPI	GGATC	4 cut(s)	291, 458, 839, 1166
BspQI	GCTCTTC	1 cut(s)	511
BspT104I	TTCGAA	1 cut(s)	398
BspT107I	GGYRCC	1 cut(s)	733
BspTNI	GGTCTC	1 cut(s)	455
BsrBI	CCGCTC	2 cut(s)	332, 1175
BsrDI	GCAATG	1 cut(s)	1527
BsrFI	RCCGGY	3 cut(s)	739, 1273, 1488
BsrGI	TGTACA	2 cut(s)	14, 885
BsrI	ACTGG	5 cut(s)	1146, 1222, 1233, 1416, 1703
BssAI	RCCGGY	3 cut(s)	739, 1273, 1488
BssECI	CCNNGG	7 cut(s)	149, 230, 260, 438, 1443, 1444, 1793
BssMI	GATC	6 cut(s)	283, 463, 517, 798, 844, 1158
BssNAI	GTATAC	1 cut(s)	1169
BssNI	GRCGYC	4 cut(s)	657, 693, 734, 1202
BssT1I	CCWWGG	1 cut(s)	149
Bst1107I	GTATAC	1 cut(s)	1169
Bst2UI	CCWGG	6 cut(s)	712, 1025, 1445, 1733, 1738, 1794
Bst4CI	ACNGT	3 cut(s)	250, 365, 1837
Bst6I	CTCTTC	1 cut(s)	511
BstACI	GRCGYC	4 cut(s)	657, 693, 734, 1202
BstAUI	TGTACA	2 cut(s)	14, 885
BstBI	TTCGAA	1 cut(s)	398
BstC8I	GCNNGC	6 cut(s)	588, 795, 940, 988, 1116, 1609
BstDEI	CTNAG	7 cut(s)	45, 491, 576, 615, 818, 1406, 1712
BstDSI	CCRYGG	2 cut(s)	149, 438
BstENI	CCTNNNNNAGG	1 cut(s)	1112
BstF5I	GGATG	4 cut(s)	289, 363, 1029, 1333
BstFNI	CGCG	3 cut(s)	191, 422, 440
BstH2I	RGCGCY	2 cut(s)	498, 737
BstHHI	GCGC	3 cut(s)	497, 736, 767
BstKTI	GATC	6 cut(s)	286, 466, 520, 801, 847, 1161
BstMAI	GTCTC	6 cut(s)	455, 835, 901, 1185, 1402, 1548
BstMBI	GATC	6 cut(s)	283, 463, 517, 798, 844, 1158
BstMCI	CGRYCG	2 cut(s)	252, 336
BstNI	CCWGG	6 cut(s)	712, 1025, 1445, 1733, 1738, 1794
BstNSI	RCATGY	1 cut(s)	13
BstSFI	CTRYAG	2 cut(s)	1571, 1756
BstUI	CGCG	3 cut(s)	191, 422, 440
BstV2I	GAAGAC	1 cut(s)	957
BstX2I	RGATCY	2 cut(s)	844, 1158
BstYI	RGATCY	2 cut(s)	844, 1158
BstZ17I	GTATAC	1 cut(s)	1169
BstZI	CGGCCG	1 cut(s)	333
BsuRI	GGCC	9 cut(s)	154, 335, 974, 1028, 1103, 1415, 1596, 1620, 1736
BtgI	CCRYGG	2 cut(s)	149, 438
BtsCI	GGATG	4 cut(s)	289, 363, 1029, 1333
BtsI	GCAGTG	3 cut(s)	307, 1673, 1731
BtsIMutI	CAGTG	4 cut(s)	307, 873, 1673, 1731
BveI	ACCTGC	2 cut(s)	411, 1564
Cac8I	GCNNGC	6 cut(s)	588, 795, 940, 988, 1116, 1609
CciI	TCATGA	1 cut(s)	1482
CfoI	GCGC	3 cut(s)	497, 736, 767
Cfr10I	RCCGGY	3 cut(s)	739, 1273, 1488
Cfr13I	GGNCC	7 cut(s)	153, 594, 811, 1101, 1131, 1594, 1619
Cfr42I	CCGCGG	1 cut(s)	441
Cfr9I	CCCGGG	2 cut(s)	230, 260
CseI	GACGC	7 cut(s)	428, 665, 701, 887, 944, 992, 1191
Csp6I	GTAC	6 cut(s)	15, 187, 743, 886, 931, 1510
CspAI	ACCGGT	1 cut(s)	1273
CspCI	CAANNNNNGTGG	2 cut(s)	1375, 1410
CviAII	CATG	6 cut(s)	10, 150, 280, 1483, 1546, 1845
CviQI	GTAC	6 cut(s)	15, 187, 743, 886, 931, 1510
DdeI	CTNAG	7 cut(s)	45, 491, 576, 615, 818, 1406, 1712
DinI	GGCGCC	1 cut(s)	735
DpnI	GATC	6 cut(s)	285, 465, 519, 800, 846, 1160
DpnII	GATC	6 cut(s)	283, 463, 517, 798, 844, 1158
DrdI	GACNNNNNNGTC	1 cut(s)	248
DseDI	GACNNNNNNGTC	1 cut(s)	248
EaeI	YGGCCR	2 cut(s)	333, 1413
EagI	CGGCCG	1 cut(s)	333
Eam1104I	CTCTTC	1 cut(s)	511
EarI	CTCTTC	1 cut(s)	511
EciI	GGCGGA	5 cut(s)	342, 594, 600, 891, 913
Ecl136II	GAGCTC	1 cut(s)	237
EclXI	CGGCCG	1 cut(s)	333
Eco130I	CCWWGG	1 cut(s)	149
Eco147I	AGGCCT	1 cut(s)	974
Eco24I	GRGCYC	2 cut(s)	239, 261
Eco31I	GGTCTC	1 cut(s)	455
Eco47I	GGWCC	3 cut(s)	594, 811, 1131
Eco47III	AGCGCT	1 cut(s)	496
Eco52I	CGGCCG	1 cut(s)	333
Eco53kI	GAGCTC	1 cut(s)	237
Eco88I	CYCGRG	4 cut(s)	230, 260, 481, 1551
EcoICRI	GAGCTC	1 cut(s)	237
EcoNI	CCTNNNNNAGG	1 cut(s)	1112
EcoRII	CCWGG	6 cut(s)	710, 1023, 1443, 1731, 1736, 1792
EcoT14I	CCWWGG	1 cut(s)	149
EcoT38I	GRGCYC	2 cut(s)	239, 261
EgeI	GGCGCC	1 cut(s)	735
EheI	GGCGCC	1 cut(s)	735
ErhI	CCWWGG	1 cut(s)	149
Esp3I	CGTCTC	2 cut(s)	835, 1185
FaeI	CATG	6 cut(s)	13, 153, 283, 1486, 1549, 1848
FaqI	GGGAC	1 cut(s)	1808
FatI	CATG	6 cut(s)	9, 149, 279, 1482, 1545, 1844
FauI	CCCGC	4 cut(s)	17, 606, 1180, 1604
FblI	GTMKAC	4 cut(s)	487, 1071, 1168, 1320
FokI	GGATG	4 cut(s)	276, 370, 1016, 1340
FriOI	GRGCYC	2 cut(s)	239, 261
FspBI	CTAG	1 cut(s)	939
GlaI	GCGC	3 cut(s)	496, 735, 766
GsaI	CCCAGC	1 cut(s)	1595
GsuI	CTGGAG	3 cut(s)	694, 1271, 1340
HaeII	RGCGCY	2 cut(s)	498, 737
HaeIII	GGCC	9 cut(s)	154, 335, 974, 1028, 1103, 1415, 1596, 1620, 1736
HgaI	GACGC	7 cut(s)	428, 665, 701, 887, 944, 992, 1191
HhaI	GCGC	3 cut(s)	497, 736, 767
Hin1I	GRCGYC	4 cut(s)	657, 693, 734, 1202
Hin1II	CATG	6 cut(s)	13, 153, 283, 1486, 1549, 1848
Hin6I	GCGC	3 cut(s)	495, 734, 765
HinP1I	GCGC	3 cut(s)	495, 734, 765
HincII	GTYRAC	3 cut(s)	488, 1072, 1321
HindII	GTYRAC	3 cut(s)	488, 1072, 1321
HindIII	AAGCTT	1 cut(s)	1244
HphI	GGTGA	2 cut(s)	1244, 1354
Hpy188III	TCNNGA	7 cut(s)	274, 1078, 1250, 1292, 1483, 1495, 1750
HpyAV	CCTTC	3 cut(s)	478, 645, 1810
HpyCH4III	ACNGT	3 cut(s)	250, 365, 1837
HpyCH4IV	ACGT	1 cut(s)	543
HpyCH4V	TGCA	5 cut(s)	1087, 1114, 1241, 1363, 1573
HpyF3I	CTNAG	7 cut(s)	45, 491, 576, 615, 818, 1406, 1712
HpySE526I	ACGT	1 cut(s)	543
Hsp92I	GRCGYC	4 cut(s)	657, 693, 734, 1202
Hsp92II	CATG	6 cut(s)	13, 153, 283, 1486, 1549, 1848
HspAI	GCGC	3 cut(s)	495, 734, 765
KasI	GGCGCC	1 cut(s)	733
KspI	CCGCGG	1 cut(s)	441
Kzo9I	GATC	6 cut(s)	283, 463, 517, 798, 844, 1158
LguI	GCTCTTC	1 cut(s)	511
MaeI	CTAG	1 cut(s)	939
MaeII	ACGT	1 cut(s)	543
MaeIII	GTNAC	3 cut(s)	1438, 1530, 1705
MalI	GATC	6 cut(s)	285, 465, 519, 800, 846, 1160
MbiI	CCGCTC	2 cut(s)	332, 1175
MboI	GATC	6 cut(s)	283, 463, 517, 798, 844, 1158
MboII	GAAGA	7 cut(s)	498, 959, 962, 1069, 1444, 1736, 1833
MfeI	CAATTG	1 cut(s)	642
MflI	RGATCY	2 cut(s)	844, 1158
MhlI	GDGCHC	4 cut(s)	239, 261, 506, 840
MlsI	TGGCCA	1 cut(s)	1415
MluCI	AATT	6 cut(s)	642, 1152, 1235, 1258, 1463, 1602
MluI	ACGCGT	2 cut(s)	189, 420
MluNI	TGGCCA	1 cut(s)	1415
Mly113I	GGCGCC	1 cut(s)	734
MmeI	TCCRAC	7 cut(s)	237, 264, 317, 564, 595, 679, 872
Mox20I	TGGCCA	1 cut(s)	1415
MscI	TGGCCA	1 cut(s)	1415
MseI	TTAA	3 cut(s)	1299, 1349, 1852
MslI	CAYNNNNRTG	1 cut(s)	1520
Msp20I	TGGCCA	1 cut(s)	1415
MspA1I	CMGCKG	4 cut(s)	24, 226, 440, 1360
MunI	CAATTG	1 cut(s)	642
MvaI	CCWGG	6 cut(s)	712, 1025, 1445, 1733, 1738, 1794
MvnI	CGCG	3 cut(s)	191, 422, 440
NarI	GGCGCC	1 cut(s)	734
NciI	CCSGG	8 cut(s)	231, 232, 261, 262, 1129, 1325, 1472, 1632
NcoI	CCATGG	1 cut(s)	149
NdeII	GATC	6 cut(s)	283, 463, 517, 798, 844, 1158
NheI	GCTAGC	1 cut(s)	938
NlaIII	CATG	6 cut(s)	13, 153, 283, 1486, 1549, 1848
NlaIV	GGNNCC	4 cut(s)	258, 596, 735, 1629
NmeAIII	GCCGAG	2 cut(s)	361, 917
NmuCI	GTSAC	2 cut(s)	1438, 1530
NspI	RCATGY	1 cut(s)	13
NspV	TTCGAA	1 cut(s)	398
PagI	TCATGA	1 cut(s)	1482
PaqCI	CACCTGC	1 cut(s)	1564
PasI	CCCWGGG	1 cut(s)	1444
PceI	AGGCCT	1 cut(s)	974
PciI	ACATGT	1 cut(s)	9
PciSI	GCTCTTC	1 cut(s)	511
PcsI	WCGNNNNNNNCGW	5 cut(s)	348, 395, 942, 1049, 1427
PfeI	GAWTC	8 cut(s)	28, 383, 728, 1060, 1288, 1379, 1741, 1784
Pfl23II	CGTACG	1 cut(s)	930
PflFI	GACNNNGTC	1 cut(s)	695
PinAI	ACCGGT	1 cut(s)	1273
PluTI	GGCGCC	1 cut(s)	737
PscI	ACATGT	1 cut(s)	9
PsiI	TTATAA	1 cut(s)	969
Psp124BI	GAGCTC	1 cut(s)	239
Psp6I	CCWGG	6 cut(s)	710, 1023, 1443, 1731, 1736, 1792
PspFI	CCCAGC	1 cut(s)	1591
PspGI	CCWGG	6 cut(s)	710, 1023, 1443, 1731, 1736, 1792
PspLI	CGTACG	1 cut(s)	930
PspN4I	GGNNCC	4 cut(s)	258, 596, 735, 1629
PspPI	GGNCC	7 cut(s)	153, 594, 811, 1101, 1131, 1594, 1619
PstI	CTGCAG	1 cut(s)	1575
PsuI	RGATCY	2 cut(s)	844, 1158
PsyI	GACNNNGTC	1 cut(s)	695
PvuII	CAGCTG	2 cut(s)	226, 1360
RsaI	GTAC	6 cut(s)	16, 188, 744, 887, 932, 1511
RsaNI	GTAC	6 cut(s)	15, 187, 743, 886, 931, 1510
RseI	CAYNNNNRTG	1 cut(s)	1520
SacI	GAGCTC	1 cut(s)	239
SacII	CCGCGG	1 cut(s)	441
SalI	GTCGAC	3 cut(s)	486, 1070, 1319
SapI	GCTCTTC	1 cut(s)	511
SaqAI	TTAA	3 cut(s)	1299, 1349, 1852
Sau3AI	GATC	6 cut(s)	283, 463, 517, 798, 844, 1158
Sau96I	GGNCC	7 cut(s)	153, 594, 811, 1101, 1131, 1594, 1619
ScaI	AGTACT	1 cut(s)	1511
SduI	GDGCHC	4 cut(s)	239, 261, 506, 840
SfcI	CTRYAG	2 cut(s)	1571, 1756
SfoI	GGCGCC	1 cut(s)	735
Sfr303I	CCGCGG	1 cut(s)	441
SfuI	TTCGAA	1 cut(s)	398
SgrBI	CCGCGG	1 cut(s)	441
SinI	GGWCC	3 cut(s)	594, 811, 1131
SmaI	CCCGGG	2 cut(s)	232, 262
SmiMI	CAYNNNNRTG	1 cut(s)	1520
Sse9I	AATT	6 cut(s)	642, 1152, 1235, 1258, 1463, 1602
SseBI	AGGCCT	1 cut(s)	974
SspDI	GGCGCC	1 cut(s)	733
SspMI	CTAG	1 cut(s)	939
SstI	GAGCTC	1 cut(s)	239
StuI	AGGCCT	1 cut(s)	974
StyI	CCWWGG	1 cut(s)	149
TaaI	ACNGT	3 cut(s)	250, 365, 1837
TaiI	ACGT	1 cut(s)	546
TaqII	GACCGA	1 cut(s)	437
TasI	AATT	6 cut(s)	642, 1152, 1235, 1258, 1463, 1602
TatI	WGTACW	3 cut(s)	14, 885, 1509
TfiI	GAWTC	8 cut(s)	28, 383, 728, 1060, 1288, 1379, 1741, 1784
Tru1I	TTAA	3 cut(s)	1299, 1349, 1852
Tru9I	TTAA	3 cut(s)	1299, 1349, 1852
TscAI	CASTG	4 cut(s)	307, 880, 1673, 1731
TseFI	GTSAC	2 cut(s)	1438, 1530
Tsp45I	GTSAC	2 cut(s)	1438, 1530
TspDTI	ATGAA	3 cut(s)	1470, 1471, 1833
TspGWI	ACGGA	7 cut(s)	258, 404, 489, 817, 855, 1058, 1167
TspMI	CCCGGG	2 cut(s)	230, 260
TspRI	CASTG	4 cut(s)	307, 880, 1673, 1731
Tth111I	GACNNNGTC	1 cut(s)	695
VpaK11BI	GGWCC	3 cut(s)	594, 811, 1131
XagI	CCTNNNNNAGG	1 cut(s)	1112
XapI	RAATTY	3 cut(s)	1152, 1235, 1258
XceI	RCATGY	1 cut(s)	13
XmaI	CCCGGG	2 cut(s)	230, 260
XmiI	GTMKAC	4 cut(s)	487, 1071, 1168, 1320
XspI	CTAG	1 cut(s)	939
ZrmI	AGTACT	1 cut(s)	1511

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.