Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0013337

Physical Location & Seq

Genomic Coordinates Forward (+)

79398683 .. 79401149

Gene Structure 2467 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00141050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGGCTTACATGTGTACAGACAGCGGGAATCTAATGGCGATTGCTCAGCAAGTCATCAAGCAAAAGCAGCAGCAAGAGCAACAGCAGCAGCAGCACTCCCACCACCACCACCAGCAGCTCACTACGGTGTTCTCTCTCTCCTCTGCTCCATGGCCCACCAACACTCATCACCCTCCGAGTTTGGGGTACGGGTTGGGGGGTTCGGGTTTTTCCGACCCGTTTCAGCTGCCCGGGAGCTCCGACACGACGGTCGGAGAGCCTGGGTTTCCGTTCCCGAACATGGATCATCATCCGACCAGCAGTGGTTTCAGGTTCTCGGATTTGGGCGGAGCGGCCGAGTTCGACTCGGACGAGTGGATGGACAGTATAATAGGCGGTGGGGATTCAACGGATAGTTCGAACTTGCCCTCTGTGTGCGACGCGTGGCAGAACAATGCCGCGGATTTCGGACTCTACGCCTCCGATCCCTTCGCTCCCTGCCCGAGTCGACTCAGCGCCCCGTGCTCTTCGCCGTCCGATCTCAACCGAGTCATATACTCCGACGTTCACAACCAGAAAACCGCCAATCTCCAACCTCAATTGCCGCCAGCGTGGACCCCACCTCCACCTCCGCCTCCGCCGCAGCAGCAGCCTTCCTCAATTGCCGTTAAAGACGCCAAATCAGCCAACCCTACTCCTCAAAACAACGACGCCGTCGGAGTGTCCTCCAGGTCGCCGGAGATTGAATCGGCGCCGCCGCTACTGAAGGCCCTACTCGACTGCGCCAGAGTCATCGAGTCCGAACCGGAGCGTGCGATCAAATCGCTGGTCCGGCTCAGAGAGTCCGTCTCCGAGCACGGAGATCCAACCGAGCGAGTTGCTTTCCACTTCACCGACGCTCTGTACAGCCGAGTCTGTCCGCCGCAACCGGAGAAAAGCTCGGCCTCGTACGACGCTAGCTGCGAAGAAGACTTCACTCTCTCTTATAAGGCCTTGAACGACGCTTGCCCTTACTCCAAGTTTGCTCACTTGACGGCGAACCAGGCCATCCTCGAAGCGACGGAGAGGGCGACGAAGATTCACATAGTCGACTTCGGGATAGTGCAAGGTGTCCAATGGGCCGCTCTGTTGCAGGCTTTGGCTACCCGGTCCACCGGAAAGCCCAGTAAAATTCGGATCTCCGGTATACCCGCTCCGTCTCTGGGGAACTCTCCGGCGGCGTCGCTTTTCGCTACTGGAAATAGACTGTGTGAATTTGCAAAGCTCCTGGAGCTGAATTTCAAGTTTGAACCGGTGCTGACTCCGATTCAGGAGCTTAACGAGTCCTGCTTTCGGGTCGACCCGGATGAGTTCTTAGCGGTGAACTTAATGCTCCAGTTGCACAACCTCCTCGACGAATCAACCACCGGAGTTGAAGCGGCTCTGAGACTGGCCAAGTCGCTGAACCCGAAGATTGTGACCCTGGGCGAGTACGAAGCGAAATTGAACCGGGTCGGGTTCATGAGCCGGTTCCAGACCGCATTGAAGTACTACACAGCAATGTTTGAGTCACTTGAACCGAACATGACCCGAGACTCGCCGGAGAGGCTGCAGGTGGAGAGGCTTTTGCTGGGCCGGAGAATTGCTGGCGGGGTCGGCCCAGAGGAACCGGGAACGAAACGACAGCGTTTGGAGGACAAAGAGCAGTGGAAGTTTTTGATGGAAAGCTCTGGTTTTGAGCCAGTGACTCTTAGCCATTACGCAGTGAGCCAGGCCAAGATTCTTCTCTGGAACTATAGTAATGCTTCGTATTCGCTAATCGAATCTCCACCTGGGTTTCTCTCTTTGGCGTGGAAGGAAGTCCCTTTGTTTACTGTTTCTTCATGGCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

616

Amino Acids

67.6

Weight (kDa)

5.39

Isoelectric Point (pI)

58.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	248 - 616	2.4e-108	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66770
fragaria_vesca	FvH4_1g13400
malus_domestica	MD02G1148800.v1.1 MD15G1263000.v1.1
prunus_persica	Prupe.7G153700_v2.0.a1 Prupe.7G153700_v2.0.a1 Prupe.7G153700_v2.0.a1
pyrus_communis	pycom02g11720
rosa_chinensis	RchiOBHm_Chr2g0101761
rosa_laevigata	RLG00000017099
rosa_multiflora	Rmu_sc0011183.1_g000004
rosa_roxburghii	Rroxscaffold_2G00141050
rosa_rugosa	Rorug02G0101900
rosa_samantha	Rh2AG149100 Rh2BG154700 Rh2CG155000 Rh2DG154900
rosa_wichuraiana	Rw2G011650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	966
AarI	CACCTGC	1 cut(s)	1561
AasI	GACNNNNNNGTC	1 cut(s)	248
Acc36I	ACCTGC	1 cut(s)	1561
AccB1I	GGYRCC	1 cut(s)	730
AccBSI	CCGCTC	3 cut(s)	332, 1103, 1172
AccI	GTMKAC	4 cut(s)	487, 1068, 1165, 1317
AccII	CGCG	2 cut(s)	422, 440
AclWI	GGATC	4 cut(s)	291, 458, 836, 1163
AcoI	YGGCCR	2 cut(s)	333, 1410
AcsI	RAATTY	3 cut(s)	1149, 1232, 1255
AcuI	CTGAAG	1 cut(s)	764
AcyI	GRCGYC	4 cut(s)	654, 690, 731, 1199
AfaI	GTAC	6 cut(s)	16, 188, 884, 929, 1451, 1508
AfiI	CCNNNNNNNGG	4 cut(s)	182, 280, 1181, 1311
AflIII	ACRYGT	2 cut(s)	9, 420
AgeI	ACCGGT	1 cut(s)	1270
AgsI	TTSAA	9 cut(s)	387, 725, 976, 1261, 1268, 1394, 1465, 1504, 1535
AjnI	CCWGG	7 cut(s)	259, 707, 1020, 1245, 1440, 1728, 1789
AleI	CACNNNNGTG	1 cut(s)	125
AluBI	AGCT	9 cut(s)	118, 226, 237, 918, 939, 1243, 1252, 1294, 1686
AluI	AGCT	9 cut(s)	118, 226, 237, 918, 939, 1243, 1252, 1294, 1686
Alw21I	GWGCWC	3 cut(s)	239, 506, 837
Alw26I	GTCTC	4 cut(s)	832, 1182, 1399, 1545
AlwI	GGATC	4 cut(s)	291, 458, 836, 1163
Ama87I	CYCGRG	3 cut(s)	230, 481, 1548
ApoI	RAATTY	3 cut(s)	1149, 1232, 1255
ArsI	GACNNNNNNTTYG	2 cut(s)	792, 824
AsiGI	ACCGGT	1 cut(s)	1270
AspLEI	GCGC	3 cut(s)	497, 733, 764
AspS9I	GGNCC	8 cut(s)	153, 594, 748, 808, 1098, 1128, 1591, 1616
AsuC2I	CCSGG	6 cut(s)	231, 232, 1126, 1322, 1469, 1629
AsuHPI	GGTGA	3 cut(s)	161, 862, 1351
AsuII	TTCGAA	1 cut(s)	398
AsuNHI	GCTAGC	1 cut(s)	935
AvaI	CYCGRG	3 cut(s)	230, 481, 1548
AvaII	GGWCC	3 cut(s)	594, 808, 1128
BalI	TGGCCA	1 cut(s)	1412
BanI	GGYRCC	1 cut(s)	730
BanII	GRGCYC	1 cut(s)	239
BbsI	GAAGAC	1 cut(s)	954
Bbv12I	GWGCWC	3 cut(s)	239, 506, 837
BccI	CCATC	3 cut(s)	352, 1034, 1672
BceAI	ACGGC	4 cut(s)	496, 629, 677, 1029
BcgI	CGANNNNNNTGC	2 cut(s)	839, 873
BciT130I	CCWGG	7 cut(s)	261, 709, 1022, 1247, 1442, 1730, 1791
BcnI	CCSGG	6 cut(s)	231, 232, 1126, 1322, 1469, 1629
BcoDI	GTCTC	4 cut(s)	832, 1182, 1399, 1545
BfaI	CTAG	1 cut(s)	936
BfmI	CTRYAG	2 cut(s)	1568, 1753
BfoI	RGCGCY	2 cut(s)	498, 734
BfuAI	ACCTGC	1 cut(s)	1561
BglI	GCCNNNNNGGC	1 cut(s)	1564
BlpI	GCTNAGC	1 cut(s)	45
BmcAI	AGTACT	1 cut(s)	1508
Bme18I	GGWCC	3 cut(s)	594, 808, 1128
BmeT110I	CYCGRG	3 cut(s)	230, 481, 1548
BmgT120I	GGNCC	8 cut(s)	153, 594, 748, 808, 1098, 1128, 1591, 1616
BmiI	GGNNCC	4 cut(s)	596, 732, 1490, 1626
BmrI	ACTGGG	1 cut(s)	1137
BmtI	GCTAGC	1 cut(s)	939
BmuI	ACTGGG	1 cut(s)	1137
BpiI	GAAGAC	1 cut(s)	954
BplI	GAGNNNNNCTC	6 cut(s)	329, 361, 812, 844, 902, 934
BpmI	CTGGAG	3 cut(s)	691, 1268, 1337
Bpu1102I	GCTNAGC	1 cut(s)	45
Bpu14I	TTCGAA	1 cut(s)	398
BpuMI	CCSGG	6 cut(s)	231, 232, 1126, 1322, 1469, 1629
BsaBI	GATNNNNATC	1 cut(s)	288
BsaHI	GRCGYC	4 cut(s)	654, 690, 731, 1199
BsaJI	CCNNGG	7 cut(s)	149, 230, 260, 438, 1440, 1441, 1790
BsaWI	WCCGGW	6 cut(s)	784, 907, 1133, 1160, 1270, 1385
BsaXI	ACNNNNNCTCC	2 cut(s)	586, 616
Bsc4I	CCNNNNNNNGG	4 cut(s)	182, 280, 1181, 1311
Bse118I	RCCGGY	2 cut(s)	1270, 1485
Bse1I	ACTGG	5 cut(s)	1143, 1219, 1354, 1413, 1700
Bse3DI	GCAATG	1 cut(s)	1524
Bse8I	GATNNNNATC	1 cut(s)	288
BseBI	CCWGG	7 cut(s)	261, 709, 1022, 1247, 1442, 1730, 1791
BseDI	CCNNGG	7 cut(s)	149, 230, 260, 438, 1440, 1441, 1790
BseGI	GGATG	4 cut(s)	289, 363, 1026, 1330
BseJI	GATNNNNATC	1 cut(s)	288
BseLI	CCNNNNNNNGG	4 cut(s)	182, 280, 1181, 1311
BseMI	GCAATG	1 cut(s)	1524
BseMII	CTCAG	4 cut(s)	59, 505, 829, 1394
BseNI	ACTGG	5 cut(s)	1143, 1219, 1354, 1413, 1700
BseRI	GAGGAG	3 cut(s)	130, 666, 1358
BseX3I	CGGCCG	1 cut(s)	333
BseYI	CCCAGC	1 cut(s)	1588
Bsh1236I	CGCG	2 cut(s)	422, 440
Bsh1285I	CGRYCG	2 cut(s)	252, 336
BshNI	GGYRCC	1 cut(s)	730
BshTI	ACCGGT	1 cut(s)	1270
BsiEI	CGRYCG	2 cut(s)	252, 336
BsiHKAI	GWGCWC	3 cut(s)	239, 506, 837
BsiHKCI	CYCGRG	3 cut(s)	230, 481, 1548
BsiWI	CGTACG	1 cut(s)	927
BslFI	GGGAC	1 cut(s)	1805
BslI	CCNNNNNNNGG	4 cut(s)	182, 280, 1181, 1311
BsmAI	GTCTC	4 cut(s)	832, 1182, 1399, 1545
BsmBI	CGTCTC	2 cut(s)	832, 1182
BsmFI	GGGAC	1 cut(s)	1805
BsoBI	CYCGRG	3 cut(s)	230, 481, 1548
Bsp119I	TTCGAA	1 cut(s)	398
Bsp1286I	GDGCHC	3 cut(s)	239, 506, 837
Bsp1407I	TGTACA	2 cut(s)	14, 882
Bsp143I	GATC	6 cut(s)	283, 463, 517, 795, 841, 1155
Bsp1720I	GCTNAGC	1 cut(s)	45
Bsp19I	CCATGG	1 cut(s)	149
BspCNI	CTCAG	4 cut(s)	58, 504, 828, 1395
BspFNI	CGCG	2 cut(s)	422, 440
BspHI	TCATGA	1 cut(s)	1479
BspLI	GGNNCC	4 cut(s)	596, 732, 1490, 1626
BspMAI	CTGCAG	1 cut(s)	1572
BspMI	ACCTGC	1 cut(s)	1561
BspOI	GCTAGC	1 cut(s)	939
BspPI	GGATC	4 cut(s)	291, 458, 836, 1163
BspQI	GCTCTTC	1 cut(s)	511
BspT104I	TTCGAA	1 cut(s)	398
BspT107I	GGYRCC	1 cut(s)	730
BsrBI	CCGCTC	3 cut(s)	332, 1103, 1172
BsrDI	GCAATG	1 cut(s)	1524
BsrFI	RCCGGY	2 cut(s)	1270, 1485
BsrGI	TGTACA	2 cut(s)	14, 882
BsrI	ACTGG	5 cut(s)	1143, 1219, 1354, 1413, 1700
BssAI	RCCGGY	2 cut(s)	1270, 1485
BssECI	CCNNGG	7 cut(s)	149, 230, 260, 438, 1440, 1441, 1790
BssMI	GATC	6 cut(s)	283, 463, 517, 795, 841, 1155
BssNAI	GTATAC	1 cut(s)	1166
BssNI	GRCGYC	4 cut(s)	654, 690, 731, 1199
BssT1I	CCWWGG	1 cut(s)	149
Bst1107I	GTATAC	1 cut(s)	1166
Bst2UI	CCWGG	7 cut(s)	261, 709, 1022, 1247, 1442, 1730, 1791
Bst4CI	ACNGT	5 cut(s)	127, 250, 365, 1227, 1834
Bst6I	CTCTTC	1 cut(s)	511
BstACI	GRCGYC	4 cut(s)	654, 690, 731, 1199
BstAUI	TGTACA	2 cut(s)	14, 882
BstBI	TTCGAA	1 cut(s)	398
BstC8I	GCNNGC	6 cut(s)	588, 792, 937, 985, 1113, 1606
BstDEI	CTNAG	6 cut(s)	45, 491, 815, 1333, 1403, 1709
BstDSI	CCRYGG	2 cut(s)	149, 438
BstF5I	GGATG	4 cut(s)	289, 363, 1026, 1330
BstFNI	CGCG	2 cut(s)	422, 440
BstH2I	RGCGCY	2 cut(s)	498, 734
BstHHI	GCGC	3 cut(s)	497, 733, 764
BstKTI	GATC	6 cut(s)	286, 466, 520, 798, 844, 1158
BstMAI	GTCTC	4 cut(s)	832, 1182, 1399, 1545
BstMBI	GATC	6 cut(s)	283, 463, 517, 795, 841, 1155
BstMCI	CGRYCG	2 cut(s)	252, 336
BstNI	CCWGG	7 cut(s)	261, 709, 1022, 1247, 1442, 1730, 1791
BstNSI	RCATGY	1 cut(s)	13
BstSFI	CTRYAG	2 cut(s)	1568, 1753
BstUI	CGCG	2 cut(s)	422, 440
BstV2I	GAAGAC	1 cut(s)	954
BstX2I	RGATCY	2 cut(s)	841, 1155
BstYI	RGATCY	2 cut(s)	841, 1155
BstZ17I	GTATAC	1 cut(s)	1166
BstZI	CGGCCG	1 cut(s)	333
BtgI	CCRYGG	2 cut(s)	149, 438
BtsCI	GGATG	4 cut(s)	289, 363, 1026, 1330
BtsI	GCAGTG	3 cut(s)	307, 1670, 1728
BtsIMutI	CAGTG	4 cut(s)	307, 1670, 1707, 1728
BveI	ACCTGC	1 cut(s)	1561
Cac8I	GCNNGC	6 cut(s)	588, 792, 937, 985, 1113, 1606
CciI	TCATGA	1 cut(s)	1479
CfoI	GCGC	3 cut(s)	497, 733, 764
Cfr10I	RCCGGY	2 cut(s)	1270, 1485
Cfr13I	GGNCC	8 cut(s)	153, 594, 748, 808, 1098, 1128, 1591, 1616
Cfr42I	CCGCGG	1 cut(s)	441
Cfr9I	CCCGGG	1 cut(s)	230
CseI	GACGC	7 cut(s)	428, 662, 698, 884, 941, 989, 1188
Csp6I	GTAC	6 cut(s)	15, 187, 883, 928, 1450, 1507
CspAI	ACCGGT	1 cut(s)	1270
CspCI	CAANNNNNGTGG	2 cut(s)	1372, 1407
CviAII	CATG	6 cut(s)	10, 150, 280, 1480, 1543, 1842
CviQI	GTAC	6 cut(s)	15, 187, 883, 928, 1450, 1507
DdeI	CTNAG	6 cut(s)	45, 491, 815, 1333, 1403, 1709
DinI	GGCGCC	1 cut(s)	732
DpnI	GATC	6 cut(s)	285, 465, 519, 797, 843, 1157
DpnII	GATC	6 cut(s)	283, 463, 517, 795, 841, 1155
DrdI	GACNNNNNNGTC	1 cut(s)	248
DseDI	GACNNNNNNGTC	1 cut(s)	248
EaeI	YGGCCR	2 cut(s)	333, 1410
EagI	CGGCCG	1 cut(s)	333
Eam1104I	CTCTTC	1 cut(s)	511
EarI	CTCTTC	1 cut(s)	511
EciI	GGCGGA	4 cut(s)	342, 600, 606, 888
Ecl136II	GAGCTC	1 cut(s)	237
EclXI	CGGCCG	1 cut(s)	333
Eco130I	CCWWGG	1 cut(s)	149
Eco147I	AGGCCT	1 cut(s)	971
Eco24I	GRGCYC	1 cut(s)	239
Eco47I	GGWCC	3 cut(s)	594, 808, 1128
Eco52I	CGGCCG	1 cut(s)	333
Eco53kI	GAGCTC	1 cut(s)	237
Eco57I	CTGAAG	1 cut(s)	764
Eco88I	CYCGRG	3 cut(s)	230, 481, 1548
EcoICRI	GAGCTC	1 cut(s)	237
EcoO109I	RGGNCCY	1 cut(s)	748
EcoRII	CCWGG	7 cut(s)	259, 707, 1020, 1245, 1440, 1728, 1789
EcoT14I	CCWWGG	1 cut(s)	149
EcoT38I	GRGCYC	1 cut(s)	239
EgeI	GGCGCC	1 cut(s)	732
EheI	GGCGCC	1 cut(s)	732
ErhI	CCWWGG	1 cut(s)	149
Esp3I	CGTCTC	2 cut(s)	832, 1182
FaeI	CATG	6 cut(s)	13, 153, 283, 1483, 1546, 1845
FaqI	GGGAC	1 cut(s)	1805
FatI	CATG	6 cut(s)	9, 149, 279, 1479, 1542, 1841
FauI	CCCGC	3 cut(s)	17, 1177, 1601
FblI	GTMKAC	4 cut(s)	487, 1068, 1165, 1317
FokI	GGATG	4 cut(s)	276, 370, 1013, 1337
FriOI	GRGCYC	1 cut(s)	239
FspBI	CTAG	1 cut(s)	936
GlaI	GCGC	3 cut(s)	496, 732, 763
GsaI	CCCAGC	1 cut(s)	1592
GsuI	CTGGAG	3 cut(s)	691, 1268, 1337
HaeII	RGCGCY	2 cut(s)	498, 734
HgaI	GACGC	7 cut(s)	428, 662, 698, 884, 941, 989, 1188
HhaI	GCGC	3 cut(s)	497, 733, 764
Hin1I	GRCGYC	4 cut(s)	654, 690, 731, 1199
Hin1II	CATG	6 cut(s)	13, 153, 283, 1483, 1546, 1845
Hin6I	GCGC	3 cut(s)	495, 731, 762
HinP1I	GCGC	3 cut(s)	495, 731, 762
HincII	GTYRAC	3 cut(s)	488, 1069, 1318
HindII	GTYRAC	3 cut(s)	488, 1069, 1318
HphI	GGTGA	3 cut(s)	161, 862, 1351
Hpy188III	TCNNGA	6 cut(s)	274, 1075, 1289, 1480, 1492, 1747
HpyAV	CCTTC	4 cut(s)	478, 642, 739, 1807
HpyCH4III	ACNGT	5 cut(s)	127, 250, 365, 1227, 1834
HpyCH4IV	ACGT	1 cut(s)	543
HpyCH4V	TGCA	5 cut(s)	1084, 1111, 1238, 1360, 1570
HpyF3I	CTNAG	6 cut(s)	45, 491, 815, 1333, 1403, 1709
HpySE526I	ACGT	1 cut(s)	543
Hsp92I	GRCGYC	4 cut(s)	654, 690, 731, 1199
Hsp92II	CATG	6 cut(s)	13, 153, 283, 1483, 1546, 1845
HspAI	GCGC	3 cut(s)	495, 731, 762
KasI	GGCGCC	1 cut(s)	730
KspI	CCGCGG	1 cut(s)	441
Kzo9I	GATC	6 cut(s)	283, 463, 517, 795, 841, 1155
LguI	GCTCTTC	1 cut(s)	511
MaeI	CTAG	1 cut(s)	936
MaeII	ACGT	1 cut(s)	543
MaeIII	GTNAC	3 cut(s)	1435, 1527, 1702
MalI	GATC	6 cut(s)	285, 465, 519, 797, 843, 1157
MbiI	CCGCTC	3 cut(s)	332, 1103, 1172
MboI	GATC	6 cut(s)	283, 463, 517, 795, 841, 1155
MboII	GAAGA	7 cut(s)	498, 956, 959, 1066, 1441, 1733, 1830
MfeI	CAATTG	2 cut(s)	578, 639
MflI	RGATCY	2 cut(s)	841, 1155
MhlI	GDGCHC	3 cut(s)	239, 506, 837
MlsI	TGGCCA	1 cut(s)	1412
MluCI	AATT	7 cut(s)	578, 639, 1149, 1232, 1255, 1460, 1599
MluI	ACGCGT	1 cut(s)	420
MluNI	TGGCCA	1 cut(s)	1412
Mly113I	GGCGCC	1 cut(s)	731
MmeI	TCCRAC	8 cut(s)	232, 237, 264, 317, 564, 595, 676, 869
Mox20I	TGGCCA	1 cut(s)	1412
MscI	TGGCCA	1 cut(s)	1412
MseI	TTAA	4 cut(s)	648, 1296, 1346, 1849
MslI	CAYNNNNRTG	2 cut(s)	125, 1517
Msp20I	TGGCCA	1 cut(s)	1412
MspA1I	CMGCKG	3 cut(s)	24, 226, 440
MunI	CAATTG	2 cut(s)	578, 639
MvaI	CCWGG	7 cut(s)	261, 709, 1022, 1247, 1442, 1730, 1791
MvnI	CGCG	2 cut(s)	422, 440
NarI	GGCGCC	1 cut(s)	731
NciI	CCSGG	6 cut(s)	231, 232, 1126, 1322, 1469, 1629
NcoI	CCATGG	1 cut(s)	149
NdeII	GATC	6 cut(s)	283, 463, 517, 795, 841, 1155
NheI	GCTAGC	1 cut(s)	935
NlaIII	CATG	6 cut(s)	13, 153, 283, 1483, 1546, 1845
NlaIV	GGNNCC	4 cut(s)	596, 732, 1490, 1626
NmeAIII	GCCGAG	3 cut(s)	361, 899, 914
NmuCI	GTSAC	3 cut(s)	1435, 1527, 1702
NspI	RCATGY	1 cut(s)	13
NspV	TTCGAA	1 cut(s)	398
OliI	CACNNNNGTG	1 cut(s)	125
PagI	TCATGA	1 cut(s)	1479
PaqCI	CACCTGC	1 cut(s)	1561
PasI	CCCWGGG	1 cut(s)	1441
PceI	AGGCCT	1 cut(s)	971
PciI	ACATGT	1 cut(s)	9
PciSI	GCTCTTC	1 cut(s)	511
PcsI	WCGNNNNNNNCGW	5 cut(s)	348, 395, 939, 1046, 1424
PfeI	GAWTC	8 cut(s)	28, 383, 725, 1057, 1285, 1376, 1738, 1781
Pfl23II	CGTACG	1 cut(s)	927
PflFI	GACNNNGTC	1 cut(s)	692
PfoI	TCCNGGA	1 cut(s)	1245
PinAI	ACCGGT	1 cut(s)	1270
PluTI	GGCGCC	1 cut(s)	734
PscI	ACATGT	1 cut(s)	9
PsiI	TTATAA	1 cut(s)	966
Psp124BI	GAGCTC	1 cut(s)	239
Psp6I	CCWGG	7 cut(s)	259, 707, 1020, 1245, 1440, 1728, 1789
PspFI	CCCAGC	1 cut(s)	1588
PspGI	CCWGG	7 cut(s)	259, 707, 1020, 1245, 1440, 1728, 1789
PspLI	CGTACG	1 cut(s)	927
PspN4I	GGNNCC	4 cut(s)	596, 732, 1490, 1626
PspPI	GGNCC	8 cut(s)	153, 594, 748, 808, 1098, 1128, 1591, 1616
PstI	CTGCAG	1 cut(s)	1572
PsuI	RGATCY	2 cut(s)	841, 1155
PsyI	GACNNNGTC	1 cut(s)	692
PvuII	CAGCTG	1 cut(s)	226
RsaI	GTAC	6 cut(s)	16, 188, 884, 929, 1451, 1508
RsaNI	GTAC	6 cut(s)	15, 187, 883, 928, 1450, 1507
RseI	CAYNNNNRTG	2 cut(s)	125, 1517
SacI	GAGCTC	1 cut(s)	239
SacII	CCGCGG	1 cut(s)	441
SalI	GTCGAC	3 cut(s)	486, 1067, 1316
SapI	GCTCTTC	1 cut(s)	511
SaqAI	TTAA	4 cut(s)	648, 1296, 1346, 1849
Sau3AI	GATC	6 cut(s)	283, 463, 517, 795, 841, 1155
Sau96I	GGNCC	8 cut(s)	153, 594, 748, 808, 1098, 1128, 1591, 1616
ScaI	AGTACT	1 cut(s)	1508
SduI	GDGCHC	3 cut(s)	239, 506, 837
SfcI	CTRYAG	2 cut(s)	1568, 1753
SfoI	GGCGCC	1 cut(s)	732
Sfr303I	CCGCGG	1 cut(s)	441
SfuI	TTCGAA	1 cut(s)	398
SgrBI	CCGCGG	1 cut(s)	441
SinI	GGWCC	3 cut(s)	594, 808, 1128
SmaI	CCCGGG	1 cut(s)	232
SmiMI	CAYNNNNRTG	2 cut(s)	125, 1517
Sse9I	AATT	7 cut(s)	578, 639, 1149, 1232, 1255, 1460, 1599
SseBI	AGGCCT	1 cut(s)	971
SspDI	GGCGCC	1 cut(s)	730
SspMI	CTAG	1 cut(s)	936
SstI	GAGCTC	1 cut(s)	239
StuI	AGGCCT	1 cut(s)	971
StyI	CCWWGG	1 cut(s)	149
TaaI	ACNGT	5 cut(s)	127, 250, 365, 1227, 1834
TaiI	ACGT	1 cut(s)	546
TasI	AATT	7 cut(s)	578, 639, 1149, 1232, 1255, 1460, 1599
TatI	WGTACW	3 cut(s)	14, 882, 1506
TfiI	GAWTC	8 cut(s)	28, 383, 725, 1057, 1285, 1376, 1738, 1781
Tru1I	TTAA	4 cut(s)	648, 1296, 1346, 1849
Tru9I	TTAA	4 cut(s)	648, 1296, 1346, 1849
TscAI	CASTG	4 cut(s)	307, 1670, 1707, 1728
TseFI	GTSAC	3 cut(s)	1435, 1527, 1702
Tsp45I	GTSAC	3 cut(s)	1435, 1527, 1702
TspDTI	ATGAA	2 cut(s)	1468, 1830
TspGWI	ACGGA	6 cut(s)	258, 404, 814, 852, 1055, 1164
TspMI	CCCGGG	1 cut(s)	230
TspRI	CASTG	4 cut(s)	307, 1670, 1707, 1728
Tth111I	GACNNNGTC	1 cut(s)	692
VpaK11BI	GGWCC	3 cut(s)	594, 808, 1128
XapI	RAATTY	3 cut(s)	1149, 1232, 1255
XceI	RCATGY	1 cut(s)	13
XmaI	CCCGGG	1 cut(s)	230
XmiI	GTMKAC	4 cut(s)	487, 1068, 1165, 1317
XspI	CTAG	1 cut(s)	936
ZrmI	AGTACT	1 cut(s)	1508

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.