Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0013337

Physical Location & Seq

Genomic Coordinates Reverse (-)

12796468 .. 12799036

Gene Structure 2569 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017099

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGCAAAGTGAAACGCTGCCAGTTTCCTCTTACGTGAAAGCTCAAAATTGTGATCCCGTTGTTTCTGGGCCTCCAGTTAGTGTGATCTCTCGTGTTTTTCCGGCGAGATTTGGCCGGAGAATGGCTTACATGTGTACAGACAGCGGGAATCTAATGGCGATTGCTCAGCAAGTCATCAAGCAAAAGCAGCAGCAAGAGCAACAGCAGCAGCAGCACACCACCCACCACCACCACCAGCTTACTACGGCGTTCTCTCTCTCCTCTGCTCCATGGCCCACCAACACTCATCACGCTCCGAGTTTGGGTTACGGGTTGGGGGGTTCGAGTTTTTCCGACCCGTTTCAGCTGCCCGGGAGCTCCGACACGACGGTCGGCGAGCCCGGGTTTCCGTTCCCGAACATGGATCATCATCCGACCAGCAGTGGGTTCAGGTTCTCGGATTTGGGCGGAGCGGCCGAGTTCGACTCGGACGAGTGGATGGACAGTATAATAGGCGGTGGGGATTCAACGGATAGTTCGAACCTGCCCTCTGTGTGCGACGCGTGGCAGAACAATGCCGCGGATTTCGGTCTCTACGCCTCCGATCCCTTCGCTCCCTGCCCGAGTCGACTCAGCGCTCCGTGCTCTTCGCCGTCCGATCTCAACCGAGTCATATACTCCGACGTTCACAACCAGAAAACCGCCAATCTCCAACCTCAATTGCCGCCGGCGTGGACCCCACCTCCGCCTCCGCCTCAGCAGCCTTCCTCAATTGCCGTTAAAGACGCCAAATCAGCCAACCCTACTCCTCAAAACAACGACGCCGCCGGAGTGTCCTCCAGGTCGCCGGAGATCGAATCGGTGCCGCCGCTACTGAAGGCCCTGCTCGACTGCGCCAGAGTCATCGAGTCCGAACCGGAGCGTGCGATCAAATCGCTGGTCCGGCTCAGAGAGTCCGTCTCCGAGCACGGAGATCCAACCGAGCGAGTTGCTTTCCACTTCACGGACGCTCTGTACAGCCGAGTCTCTCCGCCGCAACCGGAGAAAAGCTCCGCCTCGTACGACGCTAGCTGCGAAGAAGACTTCACTCTCTCTTATAAGGCCTTGAACGACGCTTGCCCTTACTCCAAGTTTGCTCACTTGACGGCGAACCAGGCCATCCTCGAAGCGACGGAGAGGGCGACGAAGATTCACATAGTCGACTTCGGGATAGTGCAAGGTGTCCAATGGGCCGCTCTATTGCAGGCTTTGGCTACTCGGTCCACCGGAAAGCCCAGTAAAATTCGGATCTCCGGTATACCGGCTCCGTCTCTGGGGAACTCTCCGGCGGCGTCGCTTTTCGCTACTGGAAATAGACTCTGTGAATTTGCAAAGCTTCTGGAGCTGAATTTCGCGTTTGATCCGGTGCTGACTCCGATTCAGGAGCTTAACGAGTCGTGCTTTCGGGTCGACCCGGATGAGTTCTTGGCGGTGAACTTAATGCTCCAGTTGCACAACCTCCTCGACGAATCAACCACCGGAGTTGAAGCGGCTCTGAGACTGGCCAAGTCGCTGAACCCGAAGATTGTGACCCTGGGCGAGTACGAAGCGAAATTGAACCGGGTCGGGTTCATGAGCCGGTTCAAGACCGCATTGAAGTACTACACGGCGATGTTTGAGTCACTTGAACCGAACATGACCCGAGACTCGCCGGAGAGGCTGCAGGTGGAGAGGCTTTTGCTGGGCCGGAGAATTGCTGGAGGGGTCGGCCCAGAGGAACCGGGAACGAAACGACAGCGTTTGGAGGACAAAGAGCAGTGGAAGCTTTTGATGGAAAGCTCTGGTTTTGAGCCAGTAACTCTTAGCCATTACGCAGTGAGCCAGGCCAAGATTCTTCTCTGGAACTATAGTAATGCTTCGTATTCGCTAATCGAATCTCCACCGGGGTTTCTCTCTTTGGCGTGGAAGGAAGTCCCTCTGTTTACTGTTTCTTCATGGCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

654

Amino Acids

71.46

Weight (kDa)

5.58

Isoelectric Point (pI)

59.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	285 - 653	3.5e-108	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66770
fragaria_vesca	FvH4_1g13400
malus_domestica	MD02G1148800.v1.1 MD15G1263000.v1.1
prunus_persica	Prupe.7G153700_v2.0.a1 Prupe.7G153700_v2.0.a1 Prupe.7G153700_v2.0.a1
pyrus_communis	pycom02g11720
rosa_chinensis	RchiOBHm_Chr2g0101761
rosa_laevigata	RLG00000017099
rosa_multiflora	Rmu_sc0011183.1_g000004
rosa_roxburghii	Rroxscaffold_2G00141050
rosa_rugosa	Rorug02G0101900
rosa_samantha	Rh2AG149100 Rh2BG154700 Rh2CG155000 Rh2DG154900
rosa_wichuraiana	Rw2G011650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1077
AarI	CACCTGC	1 cut(s)	1672
AasI	GACNNNNNNGTC	1 cut(s)	368
Acc36I	ACCTGC	2 cut(s)	531, 1672
AccB1I	GGYRCC	1 cut(s)	841
AccBSI	CCGCTC	2 cut(s)	452, 1214
AccI	GTMKAC	4 cut(s)	607, 1179, 1276, 1428
AccII	CGCG	3 cut(s)	542, 560, 1373
AclWI	GGATC	6 cut(s)	47, 411, 578, 947, 1274, 1373
AcoI	YGGCCR	3 cut(s)	112, 453, 1521
AcsI	RAATTY	3 cut(s)	1260, 1343, 1366
AcuI	CTGAAG	1 cut(s)	875
AcyI	GRCGYC	3 cut(s)	765, 801, 1310
AfaI	GTAC	5 cut(s)	136, 995, 1040, 1562, 1619
AfeI	AGCGCT	1 cut(s)	616
AfiI	CCNNNNNNNGG	6 cut(s)	121, 302, 400, 423, 982, 1292
AflIII	ACRYGT	2 cut(s)	129, 540
AgsI	TTSAA	7 cut(s)	507, 1087, 1505, 1576, 1603, 1615, 1646
AjnI	CCWGG	4 cut(s)	818, 1131, 1551, 1839
Alw21I	GWGCWC	3 cut(s)	359, 626, 948
Alw26I	GTCTC	6 cut(s)	575, 943, 1009, 1293, 1510, 1656
AlwI	GGATC	6 cut(s)	47, 411, 578, 947, 1274, 1373
Ama87I	CYCGRG	4 cut(s)	350, 380, 601, 1659
Aor51HI	AGCGCT	1 cut(s)	616
ApoI	RAATTY	3 cut(s)	1260, 1343, 1366
ArsI	GACNNNNNNTTYG	2 cut(s)	903, 935
AspLEI	GCGC	2 cut(s)	617, 875
AspS9I	GGNCC	9 cut(s)	68, 273, 714, 859, 919, 1209, 1239, 1702, 1727
AsuC2I	CCSGG	8 cut(s)	351, 352, 381, 382, 1433, 1580, 1740, 1902
AsuHPI	GGTGA	1 cut(s)	1462
AsuII	TTCGAA	1 cut(s)	518
AsuNHI	GCTAGC	1 cut(s)	1046
AvaI	CYCGRG	4 cut(s)	350, 380, 601, 1659
AvaII	GGWCC	3 cut(s)	714, 919, 1239
BalI	TGGCCA	1 cut(s)	1523
BanI	GGYRCC	1 cut(s)	841
BanII	GRGCYC	2 cut(s)	359, 381
BauI	CACGAG	1 cut(s)	90
BbsI	GAAGAC	1 cut(s)	1065
Bbv12I	GWGCWC	3 cut(s)	359, 626, 948
BbvCI	CCTCAGC	1 cut(s)	735
BccI	CCATC	3 cut(s)	472, 1145, 1783
BceAI	ACGGC	5 cut(s)	261, 616, 740, 1140, 1641
BcgI	CGANNNNNNTGC	2 cut(s)	950, 984
BciT130I	CCWGG	4 cut(s)	820, 1133, 1553, 1841
BcnI	CCSGG	8 cut(s)	351, 352, 381, 382, 1433, 1580, 1740, 1902
BcoDI	GTCTC	6 cut(s)	575, 943, 1009, 1293, 1510, 1656
BfaI	CTAG	1 cut(s)	1047
BfmI	CTRYAG	2 cut(s)	1679, 1864
BfoI	RGCGCY	1 cut(s)	618
BfuAI	ACCTGC	2 cut(s)	531, 1672
BglI	GCCNNNNNGGC	1 cut(s)	1675
BlpI	GCTNAGC	1 cut(s)	165
BmcAI	AGTACT	1 cut(s)	1619
Bme18I	GGWCC	3 cut(s)	714, 919, 1239
BmeT110I	CYCGRG	4 cut(s)	350, 380, 601, 1659
BmgT120I	GGNCC	9 cut(s)	68, 273, 714, 859, 919, 1209, 1239, 1702, 1727
BmiI	GGNNCC	4 cut(s)	716, 843, 1284, 1737
BmrI	ACTGGG	1 cut(s)	1248
BmtI	GCTAGC	1 cut(s)	1050
BmuI	ACTGGG	1 cut(s)	1248
BpiI	GAAGAC	1 cut(s)	1065
BplI	GAGNNNNNCTC	6 cut(s)	449, 481, 923, 955, 1013, 1045
BpmI	CTGGAG	5 cut(s)	57, 802, 1379, 1448, 1737
Bpu10I	CCTNAGC	1 cut(s)	735
Bpu1102I	GCTNAGC	1 cut(s)	165
Bpu14I	TTCGAA	1 cut(s)	518
BpuMI	CCSGG	8 cut(s)	351, 352, 381, 382, 1433, 1580, 1740, 1902
BsaAI	YACGTR	1 cut(s)	34
BsaBI	GATNNNNATC	1 cut(s)	408
BsaHI	GRCGYC	3 cut(s)	765, 801, 1310
BsaI	GGTCTC	1 cut(s)	575
BsaJI	CCNNGG	7 cut(s)	269, 350, 380, 558, 1551, 1552, 1901
BsaWI	WCCGGW	6 cut(s)	895, 1018, 1244, 1271, 1381, 1496
BsaXI	ACNNNNNCTCC	2 cut(s)	706, 736
Bsc4I	CCNNNNNNNGG	6 cut(s)	121, 302, 400, 423, 982, 1292
Bse118I	RCCGGY	3 cut(s)	706, 1279, 1596
Bse1I	ACTGG	7 cut(s)	20, 74, 1254, 1330, 1465, 1524, 1811
Bse8I	GATNNNNATC	1 cut(s)	408
BseBI	CCWGG	4 cut(s)	820, 1133, 1553, 1841
BseDI	CCNNGG	7 cut(s)	269, 350, 380, 558, 1551, 1552, 1901
BseGI	GGATG	4 cut(s)	409, 483, 1137, 1441
BseJI	GATNNNNATC	1 cut(s)	408
BseLI	CCNNNNNNNGG	6 cut(s)	121, 302, 400, 423, 982, 1292
BseMII	CTCAG	5 cut(s)	179, 625, 749, 940, 1505
BseNI	ACTGG	7 cut(s)	20, 74, 1254, 1330, 1465, 1524, 1811
BseRI	GAGGAG	3 cut(s)	250, 777, 1469
BseX3I	CGGCCG	1 cut(s)	453
BseYI	CCCAGC	1 cut(s)	1699
Bsh1236I	CGCG	3 cut(s)	542, 560, 1373
Bsh1285I	CGRYCG	2 cut(s)	372, 456
BshNI	GGYRCC	1 cut(s)	841
BsiEI	CGRYCG	2 cut(s)	372, 456
BsiHKAI	GWGCWC	3 cut(s)	359, 626, 948
BsiHKCI	CYCGRG	4 cut(s)	350, 380, 601, 1659
BsiWI	CGTACG	1 cut(s)	1038
BslFI	GGGAC	1 cut(s)	1916
BslI	CCNNNNNNNGG	6 cut(s)	121, 302, 400, 423, 982, 1292
BsmAI	GTCTC	6 cut(s)	575, 943, 1009, 1293, 1510, 1656
BsmBI	CGTCTC	2 cut(s)	943, 1293
BsmFI	GGGAC	1 cut(s)	1916
Bso31I	GGTCTC	1 cut(s)	575
BsoBI	CYCGRG	4 cut(s)	350, 380, 601, 1659
Bsp119I	TTCGAA	1 cut(s)	518
Bsp1286I	GDGCHC	4 cut(s)	359, 381, 626, 948
Bsp1407I	TGTACA	2 cut(s)	134, 993
Bsp1720I	GCTNAGC	1 cut(s)	165
Bsp19I	CCATGG	1 cut(s)	269
BspCNI	CTCAG	5 cut(s)	178, 624, 748, 939, 1506
BspFNI	CGCG	3 cut(s)	542, 560, 1373
BspHI	TCATGA	1 cut(s)	1590
BspLI	GGNNCC	4 cut(s)	716, 843, 1284, 1737
BspMAI	CTGCAG	1 cut(s)	1683
BspMI	ACCTGC	2 cut(s)	531, 1672
BspOI	GCTAGC	1 cut(s)	1050
BspPI	GGATC	6 cut(s)	47, 411, 578, 947, 1274, 1373
BspQI	GCTCTTC	1 cut(s)	631
BspT104I	TTCGAA	1 cut(s)	518
BspT107I	GGYRCC	1 cut(s)	841
BspTNI	GGTCTC	1 cut(s)	575
BsrBI	CCGCTC	2 cut(s)	452, 1214
BsrFI	RCCGGY	3 cut(s)	706, 1279, 1596
BsrGI	TGTACA	2 cut(s)	134, 993
BsrI	ACTGG	7 cut(s)	20, 74, 1254, 1330, 1465, 1524, 1811
BssAI	RCCGGY	3 cut(s)	706, 1279, 1596
BssECI	CCNNGG	7 cut(s)	269, 350, 380, 558, 1551, 1552, 1901
BssNAI	GTATAC	1 cut(s)	1277
BssNI	GRCGYC	3 cut(s)	765, 801, 1310
BssSI	CACGAG	1 cut(s)	90
BssT1I	CCWWGG	1 cut(s)	269
Bst1107I	GTATAC	1 cut(s)	1277
Bst2BI	CACGAG	1 cut(s)	90
Bst2UI	CCWGG	4 cut(s)	820, 1133, 1553, 1841
Bst4CI	ACNGT	3 cut(s)	370, 485, 1945
Bst6I	CTCTTC	1 cut(s)	631
BstACI	GRCGYC	3 cut(s)	765, 801, 1310
BstAUI	TGTACA	2 cut(s)	134, 993
BstBAI	YACGTR	1 cut(s)	34
BstBI	TTCGAA	1 cut(s)	518
BstC8I	GCNNGC	6 cut(s)	377, 708, 903, 1048, 1096, 1224
BstDEI	CTNAG	6 cut(s)	165, 611, 735, 926, 1514, 1820
BstDSI	CCRYGG	2 cut(s)	269, 558
BstF5I	GGATG	4 cut(s)	409, 483, 1137, 1441
BstFNI	CGCG	3 cut(s)	542, 560, 1373
BstH2I	RGCGCY	1 cut(s)	618
BstHHI	GCGC	2 cut(s)	617, 875
BstMAI	GTCTC	6 cut(s)	575, 943, 1009, 1293, 1510, 1656
BstMCI	CGRYCG	2 cut(s)	372, 456
BstNI	CCWGG	4 cut(s)	820, 1133, 1553, 1841
BstNSI	RCATGY	1 cut(s)	133
BstSFI	CTRYAG	2 cut(s)	1679, 1864
BstUI	CGCG	3 cut(s)	542, 560, 1373
BstV2I	GAAGAC	1 cut(s)	1065
BstX2I	RGATCY	2 cut(s)	952, 1266
BstYI	RGATCY	2 cut(s)	952, 1266
BstZ17I	GTATAC	1 cut(s)	1277
BstZI	CGGCCG	1 cut(s)	453
BtgI	CCRYGG	2 cut(s)	269, 558
BtgZI	GCGATG	1 cut(s)	1643
BtsCI	GGATG	4 cut(s)	409, 483, 1137, 1441
BtsI	GCAGTG	3 cut(s)	427, 1781, 1839
BtsIMutI	CAGTG	3 cut(s)	427, 1781, 1839
BveI	ACCTGC	2 cut(s)	531, 1672
Cac8I	GCNNGC	6 cut(s)	377, 708, 903, 1048, 1096, 1224
CciI	TCATGA	1 cut(s)	1590
CfoI	GCGC	2 cut(s)	617, 875
Cfr10I	RCCGGY	3 cut(s)	706, 1279, 1596
Cfr13I	GGNCC	9 cut(s)	68, 273, 714, 859, 919, 1209, 1239, 1702, 1727
Cfr42I	CCGCGG	1 cut(s)	561
Cfr9I	CCCGGG	2 cut(s)	350, 380
CseI	GACGC	7 cut(s)	548, 773, 809, 995, 1052, 1100, 1299
Csp6I	GTAC	5 cut(s)	135, 994, 1039, 1561, 1618
CspCI	CAANNNNNGTGG	2 cut(s)	1483, 1518
CviAII	CATG	6 cut(s)	130, 270, 400, 1591, 1654, 1953
CviQI	GTAC	5 cut(s)	135, 994, 1039, 1561, 1618
DdeI	CTNAG	6 cut(s)	165, 611, 735, 926, 1514, 1820
DrdI	GACNNNNNNGTC	1 cut(s)	368
DseDI	GACNNNNNNGTC	1 cut(s)	368
EaeI	YGGCCR	3 cut(s)	112, 453, 1521
EagI	CGGCCG	1 cut(s)	453
Eam1104I	CTCTTC	1 cut(s)	631
EarI	CTCTTC	1 cut(s)	631
EciI	GGCGGA	5 cut(s)	462, 714, 720, 999, 1021
Ecl136II	GAGCTC	1 cut(s)	357
EclXI	CGGCCG	1 cut(s)	453
Eco130I	CCWWGG	1 cut(s)	269
Eco147I	AGGCCT	1 cut(s)	1082
Eco24I	GRGCYC	2 cut(s)	359, 381
Eco31I	GGTCTC	1 cut(s)	575
Eco47I	GGWCC	3 cut(s)	714, 919, 1239
Eco47III	AGCGCT	1 cut(s)	616
Eco52I	CGGCCG	1 cut(s)	453
Eco53kI	GAGCTC	1 cut(s)	357
Eco57I	CTGAAG	1 cut(s)	875
Eco88I	CYCGRG	4 cut(s)	350, 380, 601, 1659
EcoICRI	GAGCTC	1 cut(s)	357
EcoO109I	RGGNCCY	1 cut(s)	859
EcoRII	CCWGG	4 cut(s)	818, 1131, 1551, 1839
EcoT14I	CCWWGG	1 cut(s)	269
EcoT38I	GRGCYC	2 cut(s)	359, 381
ErhI	CCWWGG	1 cut(s)	269
Esp3I	CGTCTC	2 cut(s)	943, 1293
FaeI	CATG	6 cut(s)	133, 273, 403, 1594, 1657, 1956
FaqI	GGGAC	1 cut(s)	1916
FatI	CATG	6 cut(s)	129, 269, 399, 1590, 1653, 1952
FauI	CCCGC	1 cut(s)	137
FblI	GTMKAC	4 cut(s)	607, 1179, 1276, 1428
FokI	GGATG	4 cut(s)	396, 490, 1124, 1448
FriOI	GRGCYC	2 cut(s)	359, 381
FspBI	CTAG	1 cut(s)	1047
GlaI	GCGC	2 cut(s)	616, 874
GsaI	CCCAGC	1 cut(s)	1703
GsuI	CTGGAG	5 cut(s)	57, 802, 1379, 1448, 1737
HaeII	RGCGCY	1 cut(s)	618
HgaI	GACGC	7 cut(s)	548, 773, 809, 995, 1052, 1100, 1299
HhaI	GCGC	2 cut(s)	617, 875
Hin1I	GRCGYC	3 cut(s)	765, 801, 1310
Hin1II	CATG	6 cut(s)	133, 273, 403, 1594, 1657, 1956
Hin6I	GCGC	2 cut(s)	615, 873
HinP1I	GCGC	2 cut(s)	615, 873
HincII	GTYRAC	3 cut(s)	608, 1180, 1429
HindII	GTYRAC	3 cut(s)	608, 1180, 1429
HindIII	AAGCTT	2 cut(s)	1352, 1781
HphI	GGTGA	1 cut(s)	1462
Hpy188III	TCNNGA	7 cut(s)	394, 1186, 1358, 1400, 1591, 1603, 1858
HpyAV	CCTTC	4 cut(s)	598, 753, 850, 1918
HpyCH4III	ACNGT	3 cut(s)	370, 485, 1945
HpyCH4IV	ACGT	2 cut(s)	33, 663
HpyCH4V	TGCA	6 cut(s)	4, 1195, 1222, 1349, 1471, 1681
HpyF3I	CTNAG	6 cut(s)	165, 611, 735, 926, 1514, 1820
HpySE526I	ACGT	2 cut(s)	33, 663
Hsp92I	GRCGYC	3 cut(s)	765, 801, 1310
Hsp92II	CATG	6 cut(s)	133, 273, 403, 1594, 1657, 1956
HspAI	GCGC	2 cut(s)	615, 873
KroI	GCCGGC	1 cut(s)	706
KroNI	GCCGGC	1 cut(s)	708
KspI	CCGCGG	1 cut(s)	561
LguI	GCTCTTC	1 cut(s)	631
MaeI	CTAG	1 cut(s)	1047
MaeII	ACGT	2 cut(s)	33, 663
MaeIII	GTNAC	4 cut(s)	305, 1546, 1638, 1813
MbiI	CCGCTC	2 cut(s)	452, 1214
MboII	GAAGA	7 cut(s)	618, 1067, 1070, 1177, 1552, 1844, 1941
MfeI	CAATTG	2 cut(s)	698, 750
MflI	RGATCY	2 cut(s)	952, 1266
MhlI	GDGCHC	4 cut(s)	359, 381, 626, 948
MlsI	TGGCCA	1 cut(s)	1523
MluCI	AATT	8 cut(s)	46, 698, 750, 1260, 1343, 1366, 1571, 1710
MluI	ACGCGT	1 cut(s)	540
MluNI	TGGCCA	1 cut(s)	1523
MmeI	TCCRAC	6 cut(s)	357, 384, 437, 684, 715, 980
Mox20I	TGGCCA	1 cut(s)	1523
MreI	CGCCGGCG	1 cut(s)	706
MroNI	GCCGGC	1 cut(s)	706
MscI	TGGCCA	1 cut(s)	1523
MseI	TTAA	4 cut(s)	759, 1407, 1457, 1960
MslI	CAYNNNNRTG	1 cut(s)	1628
Msp20I	TGGCCA	1 cut(s)	1523
MspA1I	CMGCKG	3 cut(s)	144, 346, 560
MunI	CAATTG	2 cut(s)	698, 750
MvaI	CCWGG	4 cut(s)	820, 1133, 1553, 1841
MvnI	CGCG	3 cut(s)	542, 560, 1373
NaeI	GCCGGC	1 cut(s)	708
NciI	CCSGG	8 cut(s)	351, 352, 381, 382, 1433, 1580, 1740, 1902
NcoI	CCATGG	1 cut(s)	269
NgoMIV	GCCGGC	1 cut(s)	706
NheI	GCTAGC	1 cut(s)	1046
NlaIII	CATG	6 cut(s)	133, 273, 403, 1594, 1657, 1956
NlaIV	GGNNCC	4 cut(s)	716, 843, 1284, 1737
NmeAIII	GCCGAG	2 cut(s)	481, 1025
NmuCI	GTSAC	2 cut(s)	1546, 1638
NspI	RCATGY	1 cut(s)	133
NspV	TTCGAA	1 cut(s)	518
PagI	TCATGA	1 cut(s)	1590
PaqCI	CACCTGC	1 cut(s)	1672
PasI	CCCWGGG	1 cut(s)	1552
PceI	AGGCCT	1 cut(s)	1082
PciI	ACATGT	1 cut(s)	129
PciSI	GCTCTTC	1 cut(s)	631
PcsI	WCGNNNNNNNCGW	5 cut(s)	468, 515, 1050, 1157, 1535
PdiI	GCCGGC	1 cut(s)	708
PfeI	GAWTC	8 cut(s)	148, 503, 836, 1168, 1396, 1487, 1849, 1892
Pfl23II	CGTACG	1 cut(s)	1038
Ppu21I	YACGTR	1 cut(s)	34
PscI	ACATGT	1 cut(s)	129
PsiI	TTATAA	1 cut(s)	1077
Psp124BI	GAGCTC	1 cut(s)	359
Psp6I	CCWGG	4 cut(s)	818, 1131, 1551, 1839
PspFI	CCCAGC	1 cut(s)	1699
PspGI	CCWGG	4 cut(s)	818, 1131, 1551, 1839
PspLI	CGTACG	1 cut(s)	1038
PspN4I	GGNNCC	4 cut(s)	716, 843, 1284, 1737
PspPI	GGNCC	9 cut(s)	68, 273, 714, 859, 919, 1209, 1239, 1702, 1727
PstI	CTGCAG	1 cut(s)	1683
PsuI	RGATCY	2 cut(s)	952, 1266
PvuII	CAGCTG	1 cut(s)	346
RsaI	GTAC	5 cut(s)	136, 995, 1040, 1562, 1619
RsaNI	GTAC	5 cut(s)	135, 994, 1039, 1561, 1618
RseI	CAYNNNNRTG	1 cut(s)	1628
SacI	GAGCTC	1 cut(s)	359
SacII	CCGCGG	1 cut(s)	561
SalI	GTCGAC	3 cut(s)	606, 1178, 1427
SapI	GCTCTTC	1 cut(s)	631
SaqAI	TTAA	4 cut(s)	759, 1407, 1457, 1960
Sau96I	GGNCC	9 cut(s)	68, 273, 714, 859, 919, 1209, 1239, 1702, 1727
ScaI	AGTACT	1 cut(s)	1619
SduI	GDGCHC	4 cut(s)	359, 381, 626, 948
SfcI	CTRYAG	2 cut(s)	1679, 1864
Sfr303I	CCGCGG	1 cut(s)	561
SfuI	TTCGAA	1 cut(s)	518
SgrAI	CRCCGGYG	1 cut(s)	706
SgrBI	CCGCGG	1 cut(s)	561
SinI	GGWCC	3 cut(s)	714, 919, 1239
SmaI	CCCGGG	2 cut(s)	352, 382
SmiMI	CAYNNNNRTG	1 cut(s)	1628
Sse9I	AATT	8 cut(s)	46, 698, 750, 1260, 1343, 1366, 1571, 1710
SseBI	AGGCCT	1 cut(s)	1082
SspMI	CTAG	1 cut(s)	1047
SstI	GAGCTC	1 cut(s)	359
StuI	AGGCCT	1 cut(s)	1082
StyI	CCWWGG	1 cut(s)	269
TaaI	ACNGT	3 cut(s)	370, 485, 1945
TaiI	ACGT	2 cut(s)	36, 666
TaqII	GACCGA	2 cut(s)	557, 1227
TasI	AATT	8 cut(s)	46, 698, 750, 1260, 1343, 1366, 1571, 1710
TatI	WGTACW	3 cut(s)	134, 993, 1617
TfiI	GAWTC	8 cut(s)	148, 503, 836, 1168, 1396, 1487, 1849, 1892
Tru1I	TTAA	4 cut(s)	759, 1407, 1457, 1960
Tru9I	TTAA	4 cut(s)	759, 1407, 1457, 1960
TscAI	CASTG	3 cut(s)	427, 1781, 1839
TseFI	GTSAC	2 cut(s)	1546, 1638
Tsp45I	GTSAC	2 cut(s)	1546, 1638
TspDTI	ATGAA	2 cut(s)	1579, 1941
TspGWI	ACGGA	8 cut(s)	378, 524, 609, 925, 963, 998, 1166, 1275
TspMI	CCCGGG	2 cut(s)	350, 380
TspRI	CASTG	3 cut(s)	427, 1781, 1839
VpaK11BI	GGWCC	3 cut(s)	714, 919, 1239
XapI	RAATTY	3 cut(s)	1260, 1343, 1366
XceI	RCATGY	1 cut(s)	133
XmaI	CCCGGG	2 cut(s)	350, 380
XmiI	GTMKAC	4 cut(s)	607, 1179, 1276, 1428
XspI	CTAG	1 cut(s)	1047
ZrmI	AGTACT	1 cut(s)	1619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.