Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0011811

Physical Location & Seq

Genomic Coordinates Forward (+)

18819267 .. 18821268

Gene Structure 2002 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G202200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 345 bp

ATGGAGGGTGACACATTTTCAGGGCTTGGCAATGGTACCCAAATTGATGGCAAGGTTTTGCAGACATTTCAGAAGAGCTTTGTTCAAGTCCAGAAAATCTTGGACCAGAACAGGCTGCTCATAAATGAGATAAATCACAACCATGAGTCTAAGATCCCTGACAACCTCAGCAGAAATGTGGGTCTGATCAGAGAGCTCAACAATAATATCAGGAGGGTGGTTGACCTGTATGCTGATCTTTCAAGTTCCTTCACCAAATCCATGGATACTTCTTCTGAGGGAGACTCCAGTGGTGCTTTGAAATCTGATGCAAAAGCTGGGCACAAGCGGATTAGGCCTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1313

Protein Analysis

115

Amino Acids

12.6

Weight (kDa)

8.07

Isoelectric Point (pI)

39.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G06255
fragaria_vesca	FvH4_1g08320 FvH4_1g08320
malus_domestica	MD02G1087400.v1.1
prunus_persica	Prupe.7G202200_v2.0.a1 Prupe.7G202200_v2.0.a1 Prupe.7G202200_v2.0.a1 Prupe.7G202200_v2.0.a1
pyrus_communis	pycom02g07020
rosa_chinensis	RchiOBHm_Chr2g0094381
rosa_laevigata	RLG00000016488
rosa_multiflora	Rmu_co8303891.1_g000001 Rmu_sc0003819.1_g000012
rosa_roxburghii	Rroxscaffold_2G00147170
rosa_rugosa	Rorug02G0043700
rosa_samantha	Rh2AG091600 Rh2BG091600 Rh2CG094200 Rh2DG090400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	35
AccB1I	GGYRCC	1 cut(s)	35
AciI	CCGC	1 cut(s)	328
AclWI	GGATC	1 cut(s)	148
AfaI	GTAC	1 cut(s)	37
AgsI	TTSAA	3 cut(s)	86, 243, 301
AluBI	AGCT	3 cut(s)	78, 196, 317
AluI	AGCT	3 cut(s)	78, 196, 317
Alw21I	GWGCWC	1 cut(s)	198
Alw26I	GTCTC	1 cut(s)	276
AlwI	GGATC	1 cut(s)	148
AoxI	GGCC	1 cut(s)	335
ApeKI	GCWGC	1 cut(s)	115
Asp718I	GGTACC	1 cut(s)	35
AspS9I	GGNCC	1 cut(s)	103
AsuHPI	GGTGA	2 cut(s)	20, 244
AvaII	GGWCC	1 cut(s)	103
BaeGI	GKGCMC	1 cut(s)	324
BanI	GGYRCC	1 cut(s)	35
BanII	GRGCYC	1 cut(s)	198
Bbv12I	GWGCWC	1 cut(s)	198
BbvCI	CCTCAGC	1 cut(s)	167
BbvI	GCAGC	1 cut(s)	102
BccI	CCATC	1 cut(s)	41
BciVI	GTATCC	1 cut(s)	259
BclI	TGATCA	1 cut(s)	186
BcoDI	GTCTC	1 cut(s)	276
BfuI	GTATCC	1 cut(s)	259
BisI	GCNGC	1 cut(s)	116
BlsI	GCNGC	1 cut(s)	117
Bme18I	GGWCC	1 cut(s)	103
BmgT120I	GGNCC	1 cut(s)	103
BmiI	GGNNCC	1 cut(s)	37
BmsI	GCATC	1 cut(s)	298
BplI	GAGNNNNNCTC	2 cut(s)	269, 301
BpmI	CTGGAG	1 cut(s)	271
Bpu10I	CCTNAGC	1 cut(s)	167
BsaJI	CCNNGG	1 cut(s)	261
Bse1I	ACTGG	1 cut(s)	288
Bse3DI	GCAATG	1 cut(s)	37
BseDI	CCNNGG	1 cut(s)	261
BseMI	GCAATG	1 cut(s)	37
BseMII	CTCAG	2 cut(s)	181, 267
BseNI	ACTGG	1 cut(s)	288
BseSI	GKGCMC	1 cut(s)	324
BseXI	GCAGC	1 cut(s)	102
BseYI	CCCAGC	1 cut(s)	317
BshFI	GGCC	1 cut(s)	337
BshNI	GGYRCC	1 cut(s)	35
BsiHKAI	GWGCWC	1 cut(s)	198
BsmAI	GTCTC	1 cut(s)	276
BsnI	GGCC	1 cut(s)	337
Bsp1286I	GDGCHC	2 cut(s)	198, 324
Bsp143I	GATC	3 cut(s)	153, 186, 235
Bsp19I	CCATGG	1 cut(s)	261
BspACI	CCGC	1 cut(s)	328
BspANI	GGCC	1 cut(s)	337
BspCNI	CTCAG	2 cut(s)	180, 268
BspLI	GGNNCC	1 cut(s)	37
BspPI	GGATC	1 cut(s)	148
BspQI	GCTCTTC	1 cut(s)	68
BspT107I	GGYRCC	1 cut(s)	35
BsrDI	GCAATG	1 cut(s)	37
BsrI	ACTGG	1 cut(s)	288
BssECI	CCNNGG	1 cut(s)	261
BssMI	GATC	3 cut(s)	153, 186, 235
BssT1I	CCWWGG	1 cut(s)	261
Bst6I	CTCTTC	1 cut(s)	68
BstC8I	GCNNGC	1 cut(s)	339
BstDEI	CTNAG	3 cut(s)	150, 167, 276
BstDSI	CCRYGG	1 cut(s)	261
BstKTI	GATC	3 cut(s)	156, 189, 238
BstMAI	GTCTC	1 cut(s)	276
BstMBI	GATC	3 cut(s)	153, 186, 235
BstMWI	GCNNNNNNNGC	1 cut(s)	334
BstSLI	GKGCMC	1 cut(s)	324
BstV1I	GCAGC	1 cut(s)	102
BstX2I	RGATCY	1 cut(s)	153
BstXI	CCANNNNNNTGG	2 cut(s)	47, 262
BstYI	RGATCY	1 cut(s)	153
BsuI	GTATCC	1 cut(s)	259
BsuRI	GGCC	1 cut(s)	337
BtgI	CCRYGG	1 cut(s)	261
BtsIMutI	CAGTG	1 cut(s)	295
Cac8I	GCNNGC	1 cut(s)	339
Cfr13I	GGNCC	1 cut(s)	103
Csp6I	GTAC	1 cut(s)	36
CviAII	CATG	2 cut(s)	143, 262
CviJI	RGCY	6 cut(s)	25, 78, 115, 196, 317, 337
CviKI_1	RGCY	6 cut(s)	25, 78, 115, 196, 317, 337
CviQI	GTAC	1 cut(s)	36
DdeI	CTNAG	3 cut(s)	150, 167, 276
DpnI	GATC	3 cut(s)	155, 188, 237
DpnII	GATC	3 cut(s)	153, 186, 235
Eam1104I	CTCTTC	1 cut(s)	68
EarI	CTCTTC	1 cut(s)	68
Ecl136II	GAGCTC	1 cut(s)	196
Eco130I	CCWWGG	1 cut(s)	261
Eco147I	AGGCCT	1 cut(s)	337
Eco24I	GRGCYC	1 cut(s)	198
Eco47I	GGWCC	1 cut(s)	103
Eco53kI	GAGCTC	1 cut(s)	196
EcoICRI	GAGCTC	1 cut(s)	196
EcoT14I	CCWWGG	1 cut(s)	261
EcoT38I	GRGCYC	1 cut(s)	198
ErhI	CCWWGG	1 cut(s)	261
FaeI	CATG	2 cut(s)	146, 265
FaiI	YATR	5 cut(s)	122, 144, 231, 263, 343
FatI	CATG	2 cut(s)	142, 261
FbaI	TGATCA	1 cut(s)	186
Fnu4HI	GCNGC	1 cut(s)	116
FriOI	GRGCYC	1 cut(s)	198
Fsp4HI	GCNGC	1 cut(s)	116
GluI	GCNGC	1 cut(s)	116
GsaI	CCCAGC	1 cut(s)	321
GsuI	CTGGAG	1 cut(s)	271
HaeIII	GGCC	1 cut(s)	337
Hin1II	CATG	2 cut(s)	146, 265
HincII	GTYRAC	1 cut(s)	223
HindII	GTYRAC	1 cut(s)	223
HinfI	GANTC	2 cut(s)	146, 284
HphI	GGTGA	2 cut(s)	20, 244
Hpy166II	GTNNAC	1 cut(s)	223
Hpy188I	TCNGA	5 cut(s)	72, 186, 191, 277, 307
Hpy188III	TCNNGA	2 cut(s)	91, 211
Hpy8I	GTNNAC	1 cut(s)	223
HpyAV	CCTTC	1 cut(s)	259
HpyCH4V	TGCA	3 cut(s)	61, 311, 341
HpyF10VI	GCNNNNNNNGC	1 cut(s)	334
HpyF3I	CTNAG	3 cut(s)	150, 167, 276
Hsp92II	CATG	2 cut(s)	146, 265
KpnI	GGTACC	1 cut(s)	39
Ksp22I	TGATCA	1 cut(s)	186
Kzo9I	GATC	3 cut(s)	153, 186, 235
LguI	GCTCTTC	1 cut(s)	68
LpnPI	CCDG	9 cut(s)	6, 97, 104, 119, 171, 196, 239, 301, 303
Lsp1109I	GCAGC	1 cut(s)	102
LweI	GCATC	1 cut(s)	298
MaeIII	GTNAC	1 cut(s)	8
MalI	GATC	3 cut(s)	155, 188, 237
MboI	GATC	3 cut(s)	153, 186, 235
MboII	GAAGA	2 cut(s)	85, 264
MflI	RGATCY	1 cut(s)	153
MhlI	GDGCHC	2 cut(s)	198, 324
MluCI	AATT	1 cut(s)	42
MlyI	GAGTC	2 cut(s)	155, 278
MnlI	CCTC	3 cut(s)	176, 207, 271
MslI	CAYNNNNRTG	1 cut(s)	141
MwoI	GCNNNNNNNGC	1 cut(s)	334
NcoI	CCATGG	1 cut(s)	261
NdeII	GATC	3 cut(s)	153, 186, 235
NlaIII	CATG	2 cut(s)	146, 265
NlaIV	GGNNCC	1 cut(s)	37
NmuCI	GTSAC	1 cut(s)	8
PceI	AGGCCT	1 cut(s)	337
PciSI	GCTCTTC	1 cut(s)	68
PkrI	GCNGC	1 cut(s)	117
PleI	GAGTC	2 cut(s)	154, 278
PpsI	GAGTC	2 cut(s)	154, 278
Psp124BI	GAGCTC	1 cut(s)	198
PspFI	CCCAGC	1 cut(s)	317
PspN4I	GGNNCC	1 cut(s)	37
PspPI	GGNCC	1 cut(s)	103
PsuI	RGATCY	1 cut(s)	153
RsaI	GTAC	1 cut(s)	37
RsaNI	GTAC	1 cut(s)	36
RseI	CAYNNNNRTG	1 cut(s)	141
SacI	GAGCTC	1 cut(s)	198
SapI	GCTCTTC	1 cut(s)	68
SatI	GCNGC	1 cut(s)	116
Sau3AI	GATC	3 cut(s)	153, 186, 235
Sau96I	GGNCC	1 cut(s)	103
SchI	GAGTC	2 cut(s)	155, 278
SduI	GDGCHC	2 cut(s)	198, 324
SetI	ASST	6 cut(s)	57, 80, 168, 198, 228, 319
SfaNI	GCATC	1 cut(s)	298
SinI	GGWCC	1 cut(s)	103
SmiMI	CAYNNNNRTG	1 cut(s)	141
Sse9I	AATT	1 cut(s)	42
SseBI	AGGCCT	1 cut(s)	337
SsiI	CCGC	1 cut(s)	328
SstI	GAGCTC	1 cut(s)	198
StuI	AGGCCT	1 cut(s)	337
StyI	CCWWGG	1 cut(s)	261
TasI	AATT	1 cut(s)	42
TscAI	CASTG	1 cut(s)	295
TseFI	GTSAC	1 cut(s)	8
TseI	GCWGC	1 cut(s)	115
Tsp45I	GTSAC	1 cut(s)	8
TspRI	CASTG	1 cut(s)	295
VpaK11BI	GGWCC	1 cut(s)	103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.