Protein of unknown function (DUF632)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g15580 |
| malus_domestica | MD05G1124400.v1.1 MD10G1127200.v1.1 |
| prunus_persica | Prupe.8G168100_v2.0.a1 |
| pyrus_communis | pycom05g11840 |
| rosa_chinensis | RchiOBHm_Chr6g0278761 |
| rosa_laevigata | RLG00000013195 |
| rosa_multiflora | Rmu_sc0004380.1_g000001 Rmu_sc0027143.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00189650 Rroxscaffold_7G00189920 |
| rosa_rugosa | Rorug06G0118700.1 |
| rosa_samantha | Rh6AG227500 Rh6BG233100 Rh6CG235300 Rh6DG226800 |
| rosa_wichuraiana | Rw6G019960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 533 |
| AarI | CACCTGC | 2 cut(s) | 701, 2196 |
| AatII | GACGTC | 1 cut(s) | 977 |
| Acc16I | TGCGCA | 1 cut(s) | 1382 |
| Acc36I | ACCTGC | 2 cut(s) | 701, 2196 |
| AccI | GTMKAC | 1 cut(s) | 159 |
| AccII | CGCG | 1 cut(s) | 1198 |
| AciI | CCGC | 3 cut(s) | 547, 695, 1730 |
| AcsI | RAATTY | 3 cut(s) | 1046, 1622, 1848 |
| AcuI | CTGAAG | 7 cut(s) | 95, 266, 813, 1487, 1493, 1505, 1766 |
| AcyI | GRCGYC | 3 cut(s) | 513, 974, 1230 |
| AfaI | GTAC | 3 cut(s) | 356, 437, 2117 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 626, 794, 1618 |
| AflII | CTTAAG | 1 cut(s) | 1202 |
| AflIII | ACRYGT | 1 cut(s) | 1968 |
| AgsI | TTSAA | 7 cut(s) | 342, 950, 1035, 1369, 1747, 2044, 2054 |
| AhlI | ACTAGT | 1 cut(s) | 2125 |
| AjiI | CACGTC | 2 cut(s) | 1765, 1990 |
| AjnI | CCWGG | 3 cut(s) | 1209, 1278, 1385 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 260, 292, 1382, 1410, 1414, 1442 |
| Alw21I | GWGCWC | 3 cut(s) | 103, 554, 1839 |
| Alw26I | GTCTC | 4 cut(s) | 776, 1010, 1215, 1782 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 149, 1327 |
| Ama87I | CYCGRG | 1 cut(s) | 1245 |
| AoxI | GGCC | 2 cut(s) | 290, 521 |
| ApeKI | GCWGC | 8 cut(s) | 149, 152, 1250, 1342, 1345, 1556, 1960, 2202 |
| ApoI | RAATTY | 3 cut(s) | 1046, 1622, 1848 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 854, 886 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 615, 1084, 1751 |
| AspLEI | GCGC | 2 cut(s) | 1102, 1383 |
| AspS9I | GGNCC | 2 cut(s) | 1609, 1667 |
| AsuHPI | GGTGA | 5 cut(s) | 186, 586, 725, 733, 1726 |
| AvaI | CYCGRG | 1 cut(s) | 1245 |
| AvaII | GGWCC | 2 cut(s) | 1609, 1667 |
| BanII | GRGCYC | 3 cut(s) | 554, 1774, 1839 |
| BbsI | GAAGAC | 1 cut(s) | 1871 |
| Bbv12I | GWGCWC | 3 cut(s) | 103, 554, 1839 |
| BbvI | GCAGC | 7 cut(s) | 136, 164, 1237, 1329, 1357, 1568, 1972 |
| BccI | CCATC | 5 cut(s) | 56, 301, 466, 475, 483 |
| BceAI | ACGGC | 3 cut(s) | 140, 500, 1674 |
| BciT130I | CCWGG | 3 cut(s) | 1211, 1280, 1387 |
| BciVI | GTATCC | 1 cut(s) | 585 |
| BcoDI | GTCTC | 4 cut(s) | 776, 1010, 1215, 1782 |
| BcuI | ACTAGT | 1 cut(s) | 2125 |
| BfmI | CTRYAG | 5 cut(s) | 52, 150, 954, 1251, 1343 |
| BfrI | CTTAAG | 1 cut(s) | 1202 |
| BfuAI | ACCTGC | 2 cut(s) | 701, 2196 |
| BfuI | GTATCC | 1 cut(s) | 585 |
| BisI | GCNGC | 8 cut(s) | 150, 153, 1251, 1343, 1346, 1557, 1961, 2203 |
| BlsI | GCNGC | 8 cut(s) | 151, 154, 1252, 1344, 1347, 1558, 1962, 2204 |
| BmcAI | AGTACT | 1 cut(s) | 356 |
| Bme1390I | CCNGG | 3 cut(s) | 1211, 1280, 1387 |
| Bme18I | GGWCC | 2 cut(s) | 1609, 1667 |
| BmeT110I | CYCGRG | 1 cut(s) | 1245 |
| BmgBI | CACGTC | 2 cut(s) | 1765, 1990 |
| BmgT120I | GGNCC | 2 cut(s) | 1609, 1667 |
| BmiI | GGNNCC | 4 cut(s) | 618, 1456, 1611, 2162 |
| BmrFI | CCNGG | 3 cut(s) | 1211, 1280, 1387 |
| BmsI | GCATC | 2 cut(s) | 682, 973 |
| BpiI | GAAGAC | 1 cut(s) | 1871 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1292, 1324 |
| BpmI | CTGGAG | 1 cut(s) | 1179 |
| Bpu10I | CCTNAGC | 2 cut(s) | 597, 621 |
| BpuEI | CTTGAG | 1 cut(s) | 1904 |
| BsaAI | YACGTR | 1 cut(s) | 1461 |
| BsaHI | GRCGYC | 3 cut(s) | 513, 974, 1230 |
| BsaJI | CCNNGG | 4 cut(s) | 751, 1233, 1585, 2097 |
| BsaWI | WCCGGW | 2 cut(s) | 1720, 1842 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 626, 794, 1618 |
| Bse118I | RCCGGY | 1 cut(s) | 1451 |
| Bse3DI | GCAATG | 2 cut(s) | 1673, 1737 |
| BseBI | CCWGG | 3 cut(s) | 1211, 1280, 1387 |
| BseDI | CCNNGG | 4 cut(s) | 751, 1233, 1585, 2097 |
| BseGI | GGATG | 6 cut(s) | 14, 344, 494, 871, 882, 980 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 626, 794, 1618 |
| BseMI | GCAATG | 2 cut(s) | 1673, 1737 |
| BseMII | CTCAG | 8 cut(s) | 288, 351, 363, 488, 588, 612, 1290, 1319 |
| BseRI | GAGGAG | 9 cut(s) | 177, 216, 219, 222, 225, 228, 231, 389, 462 |
| BseXI | GCAGC | 7 cut(s) | 136, 164, 1237, 1329, 1357, 1568, 1972 |
| BseYI | CCCAGC | 1 cut(s) | 2164 |
| BsgI | GTGCAG | 2 cut(s) | 729, 2088 |
| Bsh1236I | CGCG | 1 cut(s) | 1198 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1843 |
| BshFI | GGCC | 2 cut(s) | 292, 523 |
| BsiEI | CGRYCG | 1 cut(s) | 1843 |
| BsiHKAI | GWGCWC | 3 cut(s) | 103, 554, 1839 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1245 |
| BsiSI | CCGG | 4 cut(s) | 524, 1452, 1721, 1843 |
| BslFI | GGGAC | 2 cut(s) | 836, 1595 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 626, 794, 1618 |
| BsmAI | GTCTC | 4 cut(s) | 776, 1010, 1215, 1782 |
| BsmBI | CGTCTC | 1 cut(s) | 1215 |
| BsmFI | GGGAC | 2 cut(s) | 836, 1595 |
| BsmI | GAATGC | 1 cut(s) | 1541 |
| BsnI | GGCC | 2 cut(s) | 292, 523 |
| BsoBI | CYCGRG | 1 cut(s) | 1245 |
| Bsp1286I | GDGCHC | 4 cut(s) | 103, 554, 1774, 1839 |
| Bsp1407I | TGTACA | 1 cut(s) | 2115 |
| Bsp143I | GATC | 1 cut(s) | 1057 |
| Bsp19I | CCATGG | 3 cut(s) | 751, 1233, 1585 |
| Bsp68I | TCGCGA | 1 cut(s) | 1198 |
| BspACI | CCGC | 3 cut(s) | 547, 695, 1730 |
| BspANI | GGCC | 2 cut(s) | 292, 523 |
| BspCNI | CTCAG | 8 cut(s) | 289, 352, 362, 487, 589, 613, 1291, 1320 |
| BspFNI | CGCG | 1 cut(s) | 1198 |
| BspHI | TCATGA | 1 cut(s) | 1408 |
| BspLI | GGNNCC | 4 cut(s) | 618, 1456, 1611, 2162 |
| BspMAI | CTGCAG | 3 cut(s) | 154, 1255, 1347 |
| BspMI | ACCTGC | 2 cut(s) | 701, 2196 |
| BspQI | GCTCTTC | 1 cut(s) | 1332 |
| BspTI | CTTAAG | 1 cut(s) | 1202 |
| BsrDI | GCAATG | 2 cut(s) | 1673, 1737 |
| BsrFI | RCCGGY | 1 cut(s) | 1451 |
| BsrGI | TGTACA | 1 cut(s) | 2115 |
| BssAI | RCCGGY | 1 cut(s) | 1451 |
| BssECI | CCNNGG | 4 cut(s) | 751, 1233, 1585, 2097 |
| BssMI | GATC | 1 cut(s) | 1057 |
| BssNI | GRCGYC | 3 cut(s) | 513, 974, 1230 |
| BssT1I | CCWWGG | 4 cut(s) | 751, 1233, 1585, 2097 |
| Bst2UI | CCWGG | 3 cut(s) | 1211, 1280, 1387 |
| Bst6I | CTCTTC | 6 cut(s) | 187, 360, 576, 600, 1332, 1785 |
| BstACI | GRCGYC | 3 cut(s) | 513, 974, 1230 |
| BstAFI | CTTAAG | 1 cut(s) | 1202 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 149 |
| BstAUI | TGTACA | 1 cut(s) | 2115 |
| BstBAI | YACGTR | 1 cut(s) | 1461 |
| BstC8I | GCNNGC | 6 cut(s) | 71, 175, 1196, 1453, 1494, 1877 |
| BstDEI | CTNAG | 9 cut(s) | 21, 297, 349, 360, 474, 597, 621, 1299, 1328 |
| BstDSI | CCRYGG | 3 cut(s) | 751, 1233, 1585 |
| BstEII | GGTNACC | 1 cut(s) | 1732 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 624 |
| BstF5I | GGATG | 6 cut(s) | 14, 344, 494, 871, 882, 980 |
| BstFNI | CGCG | 1 cut(s) | 1198 |
| BstHHI | GCGC | 2 cut(s) | 1102, 1383 |
| BstKTI | GATC | 1 cut(s) | 1060 |
| BstMAI | GTCTC | 4 cut(s) | 776, 1010, 1215, 1782 |
| BstMBI | GATC | 1 cut(s) | 1057 |
| BstMCI | CGRYCG | 1 cut(s) | 1843 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 140, 149, 332, 1204, 1380, 1565, 1885 |
| BstNI | CCWGG | 3 cut(s) | 1211, 1280, 1387 |
| BstNSI | RCATGY | 1 cut(s) | 1972 |
| BstPI | GGTNACC | 1 cut(s) | 1732 |
| BstSCI | CCNGG | 3 cut(s) | 1209, 1278, 1385 |
| BstSFI | CTRYAG | 5 cut(s) | 52, 150, 954, 1251, 1343 |
| BstUI | CGCG | 1 cut(s) | 1198 |
| BstV1I | GCAGC | 7 cut(s) | 136, 164, 1237, 1329, 1357, 1568, 1972 |
| BstV2I | GAAGAC | 1 cut(s) | 1871 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1606 |
| BsuI | GTATCC | 1 cut(s) | 585 |
| BsuRI | GGCC | 2 cut(s) | 292, 523 |
| BtgI | CCRYGG | 3 cut(s) | 751, 1233, 1585 |
| BtrI | CACGTC | 2 cut(s) | 1765, 1990 |
| BtsCI | GGATG | 6 cut(s) | 14, 344, 494, 871, 882, 980 |
| BtsI | GCAGTG | 2 cut(s) | 90, 2143 |
| BtsIMutI | CAGTG | 3 cut(s) | 90, 249, 2143 |
| BtuMI | TCGCGA | 1 cut(s) | 1198 |
| BveI | ACCTGC | 2 cut(s) | 701, 2196 |
| Cac8I | GCNNGC | 6 cut(s) | 71, 175, 1196, 1453, 1494, 1877 |
| CaiI | CAGNNNCTG | 2 cut(s) | 149, 1327 |
| CciI | TCATGA | 1 cut(s) | 1408 |
| CfoI | GCGC | 2 cut(s) | 1102, 1383 |
| Cfr10I | RCCGGY | 1 cut(s) | 1451 |
| Cfr13I | GGNCC | 2 cut(s) | 1609, 1667 |
| CseI | GACGC | 2 cut(s) | 521, 1238 |
| Csp6I | GTAC | 3 cut(s) | 355, 436, 2116 |
| CviQI | GTAC | 3 cut(s) | 355, 436, 2116 |
| DdeI | CTNAG | 9 cut(s) | 21, 297, 349, 360, 474, 597, 621, 1299, 1328 |
| DpnI | GATC | 1 cut(s) | 1059 |
| DpnII | GATC | 1 cut(s) | 1057 |
| Eam1104I | CTCTTC | 6 cut(s) | 187, 360, 576, 600, 1332, 1785 |
| EarI | CTCTTC | 6 cut(s) | 187, 360, 576, 600, 1332, 1785 |
| EciI | GGCGGA | 1 cut(s) | 562 |
| Ecl136II | GAGCTC | 2 cut(s) | 552, 1837 |
| Eco130I | CCWWGG | 4 cut(s) | 751, 1233, 1585, 2097 |
| Eco24I | GRGCYC | 3 cut(s) | 554, 1774, 1839 |
| Eco32I | GATATC | 1 cut(s) | 1165 |
| Eco47I | GGWCC | 2 cut(s) | 1609, 1667 |
| Eco53kI | GAGCTC | 2 cut(s) | 552, 1837 |
| Eco57I | CTGAAG | 7 cut(s) | 95, 266, 813, 1487, 1493, 1505, 1766 |
| Eco88I | CYCGRG | 1 cut(s) | 1245 |
| Eco91I | GGTNACC | 1 cut(s) | 1732 |
| EcoICRI | GAGCTC | 2 cut(s) | 552, 1837 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 624 |
| EcoO65I | GGTNACC | 1 cut(s) | 1732 |
| EcoRI | GAATTC | 2 cut(s) | 1622, 1848 |
| EcoRII | CCWGG | 3 cut(s) | 1209, 1278, 1385 |
| EcoRV | GATATC | 1 cut(s) | 1165 |
| EcoT14I | CCWWGG | 4 cut(s) | 751, 1233, 1585, 2097 |
| EcoT38I | GRGCYC | 3 cut(s) | 554, 1774, 1839 |
| ErhI | CCWWGG | 4 cut(s) | 751, 1233, 1585, 2097 |
| Esp3I | CGTCTC | 1 cut(s) | 1215 |
| FaqI | GGGAC | 2 cut(s) | 836, 1595 |
| FauNDI | CATATG | 2 cut(s) | 1570, 1654 |
| FblI | GTMKAC | 1 cut(s) | 159 |
| Fnu4HI | GCNGC | 8 cut(s) | 150, 153, 1251, 1343, 1346, 1557, 1961, 2203 |
| FokI | GGATG | 6 cut(s) | 21, 331, 501, 878, 889, 967 |
| FriOI | GRGCYC | 3 cut(s) | 554, 1774, 1839 |
| Fsp4HI | GCNGC | 8 cut(s) | 150, 153, 1251, 1343, 1346, 1557, 1961, 2203 |
| FspAI | RTGCGCAY | 1 cut(s) | 1382 |
| FspI | TGCGCA | 1 cut(s) | 1382 |
| GlaI | GCGC | 2 cut(s) | 1101, 1382 |
| GluI | GCNGC | 8 cut(s) | 150, 153, 1251, 1343, 1346, 1557, 1961, 2203 |
| GsaI | CCCAGC | 1 cut(s) | 2168 |
| GsuI | CTGGAG | 1 cut(s) | 1179 |
| HaeIII | GGCC | 2 cut(s) | 292, 523 |
| HapII | CCGG | 4 cut(s) | 524, 1452, 1721, 1843 |
| HgaI | GACGC | 2 cut(s) | 521, 1238 |
| HhaI | GCGC | 2 cut(s) | 1102, 1383 |
| Hin1I | GRCGYC | 3 cut(s) | 513, 974, 1230 |
| Hin6I | GCGC | 2 cut(s) | 1100, 1381 |
| HinP1I | GCGC | 2 cut(s) | 1100, 1381 |
| HincII | GTYRAC | 3 cut(s) | 303, 832, 1819 |
| HindII | GTYRAC | 3 cut(s) | 303, 832, 1819 |
| HindIII | AAGCTT | 2 cut(s) | 986, 1750 |
| HpaII | CCGG | 4 cut(s) | 524, 1452, 1721, 1843 |
| HphI | GGTGA | 5 cut(s) | 186, 586, 725, 733, 1726 |
| Hpy166II | GTNNAC | 5 cut(s) | 160, 303, 832, 1670, 1819 |
| Hpy188III | TCNNGA | 7 cut(s) | 620, 1089, 1197, 1321, 1409, 1861, 1883 |
| Hpy8I | GTNNAC | 5 cut(s) | 160, 303, 832, 1670, 1819 |
| Hpy99I | CGWCG | 1 cut(s) | 976 |
| HpyCH4IV | ACGT | 4 cut(s) | 974, 1460, 1764, 1989 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 140, 149, 332, 1204, 1380, 1565, 1885 |
| HpyF3I | CTNAG | 9 cut(s) | 21, 297, 349, 360, 474, 597, 621, 1299, 1328 |
| HpySE526I | ACGT | 4 cut(s) | 974, 1460, 1764, 1989 |
| Hsp92I | GRCGYC | 3 cut(s) | 513, 974, 1230 |
| HspAI | GCGC | 2 cut(s) | 1100, 1381 |
| KroI | GCCGGC | 1 cut(s) | 1451 |
| KroNI | GCCGGC | 1 cut(s) | 1453 |
| Kzo9I | GATC | 1 cut(s) | 1057 |
| LguI | GCTCTTC | 1 cut(s) | 1332 |
| LmnI | GCTCC | 7 cut(s) | 549, 697, 802, 1025, 1460, 1635, 1957 |
| Lsp1109I | GCAGC | 7 cut(s) | 136, 164, 1237, 1329, 1357, 1568, 1972 |
| LweI | GCATC | 2 cut(s) | 682, 973 |
| MaeII | ACGT | 4 cut(s) | 974, 1460, 1764, 1989 |
| MaeIII | GTNAC | 4 cut(s) | 43, 539, 1732, 2128 |
| MalI | GATC | 1 cut(s) | 1059 |
| MboI | GATC | 1 cut(s) | 1057 |
| MfeI | CAATTG | 1 cut(s) | 899 |
| MhlI | GDGCHC | 4 cut(s) | 103, 554, 1774, 1839 |
| MlyI | GAGTC | 6 cut(s) | 308, 1012, 1310, 1922, 1946, 2087 |
| MmeI | TCCRAC | 1 cut(s) | 1380 |
| MroNI | GCCGGC | 1 cut(s) | 1451 |
| MroXI | GAANNNNTTC | 3 cut(s) | 615, 1084, 1751 |
| MseI | TTAA | 6 cut(s) | 501, 1050, 1152, 1203, 1376, 1542 |
| MspA1I | CMGCKG | 3 cut(s) | 73, 791, 1646 |
| MspCI | CTTAAG | 1 cut(s) | 1202 |
| MspI | CCGG | 4 cut(s) | 524, 1452, 1721, 1843 |
| MspR9I | CCNGG | 3 cut(s) | 1211, 1280, 1387 |
| MunI | CAATTG | 1 cut(s) | 899 |
| Mva1269I | GAATGC | 1 cut(s) | 1541 |
| MvaI | CCWGG | 3 cut(s) | 1211, 1280, 1387 |
| MvnI | CGCG | 1 cut(s) | 1198 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 140, 149, 332, 1204, 1380, 1565, 1885 |
| NaeI | GCCGGC | 1 cut(s) | 1453 |
| NcoI | CCATGG | 3 cut(s) | 751, 1233, 1585 |
| NdeI | CATATG | 2 cut(s) | 1570, 1654 |
| NdeII | GATC | 1 cut(s) | 1057 |
| NgoMIV | GCCGGC | 1 cut(s) | 1451 |
| NlaIV | GGNNCC | 4 cut(s) | 618, 1456, 1611, 2162 |
| NmuCI | GTSAC | 1 cut(s) | 1732 |
| NruI | TCGCGA | 1 cut(s) | 1198 |
| NsbI | TGCGCA | 1 cut(s) | 1382 |
| NspI | RCATGY | 1 cut(s) | 1972 |
| PaeR7I | CTCGAG | 1 cut(s) | 1245 |
| PagI | TCATGA | 1 cut(s) | 1408 |
| PaqCI | CACCTGC | 2 cut(s) | 701, 2196 |
| PciI | ACATGT | 1 cut(s) | 1968 |
| PciSI | GCTCTTC | 1 cut(s) | 1332 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1761 |
| PctI | GAATGC | 1 cut(s) | 1541 |
| PdiI | GCCGGC | 1 cut(s) | 1453 |
| PdmI | GAANNNNTTC | 3 cut(s) | 615, 1084, 1751 |
| PfeI | GAWTC | 7 cut(s) | 812, 854, 1085, 1275, 1317, 1426, 2034 |
| PkrI | GCNGC | 8 cut(s) | 151, 154, 1252, 1344, 1347, 1558, 1962, 2204 |
| PleI | GAGTC | 6 cut(s) | 307, 1011, 1309, 1921, 1945, 2086 |
| PpsI | GAGTC | 6 cut(s) | 307, 1011, 1309, 1921, 1945, 2086 |
| Ppu21I | YACGTR | 1 cut(s) | 1461 |
| PscI | ACATGT | 1 cut(s) | 1968 |
| PsiI | TTATAA | 1 cut(s) | 533 |
| Psp124BI | GAGCTC | 2 cut(s) | 554, 1839 |
| Psp6I | CCWGG | 3 cut(s) | 1209, 1278, 1385 |
| PspEI | GGTNACC | 1 cut(s) | 1732 |
| PspFI | CCCAGC | 1 cut(s) | 2164 |
| PspGI | CCWGG | 3 cut(s) | 1209, 1278, 1385 |
| PspN4I | GGNNCC | 4 cut(s) | 618, 1456, 1611, 2162 |
| PspPI | GGNCC | 2 cut(s) | 1609, 1667 |
| PspXI | VCTCGAGB | 1 cut(s) | 1245 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1454, 1486 |
| PstI | CTGCAG | 3 cut(s) | 154, 1255, 1347 |
| PstNI | CAGNNNCTG | 2 cut(s) | 149, 1327 |
| PvuII | CAGCTG | 3 cut(s) | 73, 791, 1646 |
| RruI | TCGCGA | 1 cut(s) | 1198 |
| RsaI | GTAC | 3 cut(s) | 356, 437, 2117 |
| RsaNI | GTAC | 3 cut(s) | 355, 436, 2116 |
| SacI | GAGCTC | 2 cut(s) | 554, 1839 |
| SapI | GCTCTTC | 1 cut(s) | 1332 |
| SaqAI | TTAA | 6 cut(s) | 501, 1050, 1152, 1203, 1376, 1542 |
| SatI | GCNGC | 8 cut(s) | 150, 153, 1251, 1343, 1346, 1557, 1961, 2203 |
| Sau3AI | GATC | 1 cut(s) | 1057 |
| Sau96I | GGNCC | 2 cut(s) | 1609, 1667 |
| ScaI | AGTACT | 1 cut(s) | 356 |
| SchI | GAGTC | 6 cut(s) | 308, 1012, 1310, 1922, 1946, 2087 |
| ScrFI | CCNGG | 3 cut(s) | 1211, 1280, 1387 |
| SduI | GDGCHC | 4 cut(s) | 103, 554, 1774, 1839 |
| SfaNI | GCATC | 2 cut(s) | 682, 973 |
| SfcI | CTRYAG | 5 cut(s) | 52, 150, 954, 1251, 1343 |
| Sfr274I | CTCGAG | 1 cut(s) | 1245 |
| SinI | GGWCC | 2 cut(s) | 1609, 1667 |
| SlaI | CTCGAG | 1 cut(s) | 1245 |
| SmlI | CTYRAG | 3 cut(s) | 1202, 1245, 1883 |
| SmoI | CTYRAG | 3 cut(s) | 1202, 1245, 1883 |
| SpeI | ACTAGT | 1 cut(s) | 2125 |
| SsiI | CCGC | 3 cut(s) | 547, 695, 1730 |
| SstI | GAGCTC | 2 cut(s) | 554, 1839 |
| StyD4I | CCNGG | 3 cut(s) | 1209, 1278, 1385 |
| StyI | CCWWGG | 4 cut(s) | 751, 1233, 1585, 2097 |
| TaiI | ACGT | 4 cut(s) | 977, 1463, 1767, 1992 |
| TaqI | TCGA | 5 cut(s) | 971, 1246, 1515, 1575, 1839 |
| TatI | WGTACW | 2 cut(s) | 354, 2115 |
| TfiI | GAWTC | 7 cut(s) | 812, 854, 1085, 1275, 1317, 1426, 2034 |
| Tru1I | TTAA | 6 cut(s) | 501, 1050, 1152, 1203, 1376, 1542 |
| Tru9I | TTAA | 6 cut(s) | 501, 1050, 1152, 1203, 1376, 1542 |
| TscAI | CASTG | 3 cut(s) | 90, 256, 2143 |
| TseFI | GTSAC | 1 cut(s) | 1732 |
| TseI | GCWGC | 8 cut(s) | 149, 152, 1250, 1342, 1345, 1556, 1960, 2202 |
| Tsp45I | GTSAC | 1 cut(s) | 1732 |
| TspGWI | ACGGA | 1 cut(s) | 1186 |
| TspRI | CASTG | 3 cut(s) | 90, 256, 2143 |
| Vha464I | CTTAAG | 1 cut(s) | 1202 |
| VpaK11BI | GGWCC | 2 cut(s) | 1609, 1667 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 624 |
| XapI | RAATTY | 3 cut(s) | 1046, 1622, 1848 |
| XceI | RCATGY | 1 cut(s) | 1972 |
| XhoI | CTCGAG | 1 cut(s) | 1245 |
| XmiI | GTMKAC | 1 cut(s) | 159 |
| XmnI | GAANNNNTTC | 3 cut(s) | 615, 1084, 1751 |
| ZraI | GACGTC | 1 cut(s) | 975 |
| ZrmI | AGTACT | 1 cut(s) | 356 |