Prupe.8G171500_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
17545622 .. 17545828
207 bp
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UTR
Exon/CDS
Intron
Prupe.8G171500.1

Sequence Viewer

Length: 207 bp
ATGGCTGAACCAAGGCCCAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAATAGACGCGCCTCGGTTAGAACCTCATAAGCTGCGTCATTGCCCCAAGCGCAAAGATACTTCAATCATCGGCTTCCGCTCACTTTTATCCCACTACAGCAACTCAGCCTTTTCTGCTCTATCCATATGGGACTACAACTTCTTCTTTTACAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

69

Amino Acids

7.93

Weight (kDa)

9.89

Isoelectric Point (pI)

57.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022456)

Species Orthologous Gene IDs
prunus_persica Prupe.8G171200_v2.0.a1 Prupe.8G171500_v2.0.a1
pyrus_communis pycom01g15660
rosa_roxburghii Rroxscaffold_1G00012460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 129
AccII CGCG 1 cut(s) 59
AciI CCGC 1 cut(s) 127
AfiI CCNNNNNNNGG 2 cut(s) 23, 24
AgsI TTSAA 2 cut(s) 44, 114
AluBI AGCT 1 cut(s) 82
AluI AGCT 1 cut(s) 82
AoxI GGCC 1 cut(s) 14
ApeKI GCWGC 1 cut(s) 82
AspLEI GCGC 2 cut(s) 61, 102
AspS9I GGNCC 1 cut(s) 15
BbvI GCAGC 1 cut(s) 69
BfmI CTRYAG 1 cut(s) 145
BisI GCNGC 1 cut(s) 83
BlsI GCNGC 1 cut(s) 84
BmgT120I GGNCC 1 cut(s) 15
BsaJI CCNNGG 2 cut(s) 11, 62
Bsc4I CCNNNNNNNGG 2 cut(s) 23, 24
Bse3DI GCAATG 1 cut(s) 88
BseDI CCNNGG 2 cut(s) 11, 62
BseLI CCNNNNNNNGG 2 cut(s) 23, 24
BseMI GCAATG 1 cut(s) 88
BseMII CTCAG 1 cut(s) 168
BseXI GCAGC 1 cut(s) 69
Bsh1236I CGCG 1 cut(s) 59
BshFI GGCC 1 cut(s) 16
BslFI GGGAC 1 cut(s) 194
BslI CCNNNNNNNGG 2 cut(s) 23, 24
BsmFI GGGAC 1 cut(s) 194
BsnI GGCC 1 cut(s) 16
BspACI CCGC 1 cut(s) 127
BspANI GGCC 1 cut(s) 16
BspCNI CTCAG 1 cut(s) 167
BspFNI CGCG 1 cut(s) 59
BsrBI CCGCTC 1 cut(s) 129
BsrDI GCAATG 1 cut(s) 88
BssECI CCNNGG 2 cut(s) 11, 62
BssT1I CCWWGG 1 cut(s) 11
BstDEI CTNAG 1 cut(s) 154
BstFNI CGCG 1 cut(s) 59
BstHHI GCGC 2 cut(s) 61, 102
BstMWI GCNNNNNNNGC 3 cut(s) 56, 99, 164
BstSFI CTRYAG 1 cut(s) 145
BstUI CGCG 1 cut(s) 59
BstV1I GCAGC 1 cut(s) 69
BsuRI GGCC 1 cut(s) 16
CfoI GCGC 2 cut(s) 61, 102
Cfr13I GGNCC 1 cut(s) 15
CseI GACGC 2 cut(s) 65, 74
CviJI RGCY 5 cut(s) 5, 16, 82, 123, 158
CviKI_1 RGCY 5 cut(s) 5, 16, 82, 123, 158
DdeI CTNAG 1 cut(s) 154
Eco130I CCWWGG 1 cut(s) 11
EcoT14I CCWWGG 1 cut(s) 11
ErhI CCWWGG 1 cut(s) 11
FaiI YATR 3 cut(s) 78, 176, 178
FaqI GGGAC 1 cut(s) 194
FauNDI CATATG 1 cut(s) 176
Fnu4HI GCNGC 1 cut(s) 83
Fsp4HI GCNGC 1 cut(s) 83
GlaI GCGC 2 cut(s) 60, 101
GluI GCNGC 1 cut(s) 83
HaeIII GGCC 1 cut(s) 16
HgaI GACGC 2 cut(s) 65, 74
HhaI GCGC 2 cut(s) 61, 102
Hin6I GCGC 2 cut(s) 59, 100
HinP1I GCGC 2 cut(s) 59, 100
HpyF10VI GCNNNNNNNGC 3 cut(s) 56, 99, 164
HpyF3I CTNAG 1 cut(s) 154
HspAI GCGC 2 cut(s) 59, 100
LpnPI CCDG 1 cut(s) 60
Lsp1109I GCAGC 1 cut(s) 69
MbiI CCGCTC 1 cut(s) 129
MboII GAAGA 1 cut(s) 184
MfeI CAATTG 1 cut(s) 202
MluCI AATT 1 cut(s) 202
MnlI CCTC 3 cut(s) 15, 72, 84
MunI CAATTG 1 cut(s) 202
MvnI CGCG 1 cut(s) 59
MwoI GCNNNNNNNGC 3 cut(s) 56, 99, 164
NdeI CATATG 1 cut(s) 176
PkrI GCNGC 1 cut(s) 84
PspPI GGNCC 1 cut(s) 15
SatI GCNGC 1 cut(s) 83
Sau96I GGNCC 1 cut(s) 15
SetI ASST 2 cut(s) 76, 84
SfcI CTRYAG 1 cut(s) 145
SgeI CNNG 6 cut(s) 24, 31, 59, 70, 75, 109
Sse9I AATT 1 cut(s) 202
SsiI CCGC 1 cut(s) 127
StyI CCWWGG 1 cut(s) 11
TasI AATT 1 cut(s) 202
TseI GCWGC 1 cut(s) 82
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.