Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0020152

Physical Location & Seq

Genomic Coordinates Forward (+)

18209645 .. 18211172

Gene Structure 1528 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G182400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 744 bp

ATGTCAGGATTGGACCCTGATCCTGATCCTGATGCACCAACCAATGCAAGTCCAGGTGCGCCACCCTCGGCGCGGAGGCCTCGGGGCCGCCCTCCCGGCTCAAAGAACAAGCCCAAGCCACCACTCATAATCACTCAAGACGCCCCAAATGGGCTCACGTCTCATGTTCTAGAAGTTTCTTCCGGTTCAGACATCGTTGACTCGTTGGTGACCTACGCCAGCCGACGCGGCCGAGGCGTTTGTGTGCTGAGTGGCAGTGGTGCGGTGACAAATGTCACCTTGCGCCAGCCAGCCACGACAGTATTATTATCACCGTCAGATAATGGTACTGTCGTGACATTACAGGGCCGGTTTGAGATTCTTTCTATAACCGGCACGTGCCTGCCTCCACCAGCCCCACCTGGAGCCGGTGGCCTGTCAATATATCTGACAGGCGGCCAAGGACAGGTTGCTGGAGGGATTGTTGTGGGGCCTTTGAGGGCTTCAGGCCCAGTGGTGTTGATGGTTGTTTCATTTGCTCATGCAGTGTATGATAGGTTGCCGCTGGAGGAAGAGGAGGAGAAAGAGCCTTCAGCGCCGCGAATACAGGCGCCAGCAGCGGCTTCACAGTCTTCGGGAGTGACAGGTGGCGGCGGCAGTGGCGGTGATAGTTATAATTTGGGTGTGACCAGTATTAGCATGGGGAATAGTGGTTTTCCTGGTGATGTATACGGGTGGAGTAGTGGGAGTAGTCTGCCCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003680 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0010468 GO:0010556 GO:0010646 GO:0010648 GO:0019219 GO:0019222 GO:0023051 GO:0023057 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043621 GO:0044424 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF296

Protein Analysis

248

Amino Acids

24.74

Weight (kDa)

5.68

Isoelectric Point (pI)

52.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0020152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35390
malus_domestica	MD05G1144000.v1.1 MD10G1143600.v1.1
prunus_persica	Prupe.8G182400_v2.0.a1
pyrus_communis	pycom05g13830 pycom10g12360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	654
AccB1I	GGYRCC	1 cut(s)	589
AccI	GTMKAC	1 cut(s)	708
AccII	CGCG	3 cut(s)	73, 228, 580
AclWI	GGATC	2 cut(s)	14, 20
AcoI	YGGCCR	2 cut(s)	229, 436
AcuI	CTGAAG	2 cut(s)	468, 555
AcvI	CACGTG	1 cut(s)	378
AcyI	GRCGYC	2 cut(s)	141, 590
AfaI	GTAC	1 cut(s)	328
AfiI	CCNNNNNNNGG	4 cut(s)	72, 150, 407, 445
AjiI	CACGTC	1 cut(s)	159
AjnI	CCWGG	3 cut(s)	52, 400, 697
Alw26I	GTCTC	1 cut(s)	165
AlwI	GGATC	2 cut(s)	14, 20
Ama87I	CYCGRG	1 cut(s)	81
AoxI	GGCC	8 cut(s)	77, 85, 229, 346, 412, 436, 470, 487
ApeKI	GCWGC	1 cut(s)	596
AspLEI	GCGC	5 cut(s)	61, 73, 285, 577, 592
AspS9I	GGNCC	5 cut(s)	13, 85, 346, 470, 488
AsuC2I	CCSGG	1 cut(s)	96
AsuHPI	GGTGA	6 cut(s)	220, 268, 277, 303, 656, 713
AvaI	CYCGRG	1 cut(s)	81
AvaII	GGWCC	1 cut(s)	13
BaeI	ACNNNNGTAYC	2 cut(s)	318, 351
BanI	GGYRCC	1 cut(s)	589
BanII	GRGCYC	1 cut(s)	156
BbrPI	CACGTG	1 cut(s)	378
BbsI	GAAGAC	1 cut(s)	603
BbvI	GCAGC	1 cut(s)	608
BccI	CCATC	1 cut(s)	496
BciT130I	CCWGG	3 cut(s)	54, 402, 699
BcnI	CCSGG	1 cut(s)	96
BcoDI	GTCTC	1 cut(s)	165
BfaI	CTAG	1 cut(s)	170
BfoI	RGCGCY	2 cut(s)	578, 593
BglI	GCCNNNNNGGC	2 cut(s)	96, 228
BisI	GCNGC	9 cut(s)	88, 229, 436, 542, 578, 597, 600, 631, 634
BlsI	GCNGC	9 cut(s)	89, 230, 437, 543, 579, 598, 601, 632, 635
Bme1390I	CCNGG	4 cut(s)	54, 96, 402, 699
Bme18I	GGWCC	1 cut(s)	13
BmeT110I	CYCGRG	1 cut(s)	81
BmgBI	CACGTC	1 cut(s)	159
BmgT120I	GGNCC	5 cut(s)	13, 85, 346, 470, 488
BmiI	GGNNCC	5 cut(s)	15, 86, 406, 471, 591
BmrFI	CCNGG	4 cut(s)	54, 96, 402, 699
BmrI	ACTGGG	1 cut(s)	485
BmsI	GCATC	1 cut(s)	22
BmuI	ACTGGG	1 cut(s)	485
BoxI	GACNNNNGTC	1 cut(s)	272
BpiI	GAAGAC	1 cut(s)	603
BpmI	CTGGAG	3 cut(s)	423, 474, 566
BpuEI	CTTGAG	1 cut(s)	120
BpuMI	CCSGG	1 cut(s)	96
BsaAI	YACGTR	1 cut(s)	378
BsaBI	GATNNNNATC	1 cut(s)	24
BsaHI	GRCGYC	2 cut(s)	141, 590
BsaJI	CCNNGG	4 cut(s)	66, 80, 232, 439
BsaWI	WCCGGW	1 cut(s)	182
BsaXI	ACNNNNNCTCC	2 cut(s)	447, 477
Bsc4I	CCNNNNNNNGG	4 cut(s)	72, 150, 407, 445
Bse118I	RCCGGY	3 cut(s)	348, 371, 407
Bse1I	ACTGG	2 cut(s)	491, 669
Bse8I	GATNNNNATC	1 cut(s)	24
BseBI	CCWGG	3 cut(s)	54, 402, 699
BseDI	CCNNGG	4 cut(s)	66, 80, 232, 439
BseJI	GATNNNNATC	1 cut(s)	24
BseLI	CCNNNNNNNGG	4 cut(s)	72, 150, 407, 445
BseMII	CTCAG	1 cut(s)	239
BseNI	ACTGG	2 cut(s)	491, 669
BseRI	GAGGAG	2 cut(s)	569, 572
BseX3I	CGGCCG	1 cut(s)	229
BseXI	GCAGC	1 cut(s)	608
Bsh1236I	CGCG	3 cut(s)	73, 228, 580
Bsh1285I	CGRYCG	1 cut(s)	232
BshFI	GGCC	8 cut(s)	79, 87, 231, 348, 414, 438, 472, 489
BshNI	GGYRCC	1 cut(s)	589
BsiEI	CGRYCG	1 cut(s)	232
BsiHKCI	CYCGRG	1 cut(s)	81
BsiSI	CCGG	5 cut(s)	96, 183, 349, 372, 408
BslI	CCNNNNNNNGG	4 cut(s)	72, 150, 407, 445
BsmAI	GTCTC	1 cut(s)	165
BsmBI	CGTCTC	1 cut(s)	165
BsnI	GGCC	8 cut(s)	79, 87, 231, 348, 414, 438, 472, 489
BsoBI	CYCGRG	1 cut(s)	81
Bsp1286I	GDGCHC	1 cut(s)	156
Bsp143I	GATC	2 cut(s)	19, 25
BspANI	GGCC	8 cut(s)	79, 87, 231, 348, 414, 438, 472, 489
BspCNI	CTCAG	1 cut(s)	240
BspFNI	CGCG	3 cut(s)	73, 228, 580
BspLI	GGNNCC	5 cut(s)	15, 86, 406, 471, 591
BspPI	GGATC	2 cut(s)	14, 20
BspT107I	GGYRCC	1 cut(s)	589
BsrFI	RCCGGY	3 cut(s)	348, 371, 407
BsrI	ACTGG	2 cut(s)	491, 669
BssAI	RCCGGY	3 cut(s)	348, 371, 407
BssECI	CCNNGG	4 cut(s)	66, 80, 232, 439
BssMI	GATC	2 cut(s)	19, 25
BssNAI	GTATAC	1 cut(s)	709
BssNI	GRCGYC	2 cut(s)	141, 590
BssT1I	CCWWGG	1 cut(s)	439
Bst1107I	GTATAC	1 cut(s)	709
Bst2UI	CCWGG	3 cut(s)	54, 402, 699
Bst4CI	ACNGT	4 cut(s)	301, 315, 331, 609
Bst6I	CTCTTC	1 cut(s)	546
BstACI	GRCGYC	2 cut(s)	141, 590
BstBAI	YACGTR	1 cut(s)	378
BstC8I	GCNNGC	5 cut(s)	220, 287, 291, 383, 594
BstDEI	CTNAG	1 cut(s)	248
BstEII	GGTNACC	1 cut(s)	208
BstFNI	CGCG	3 cut(s)	73, 228, 580
BstH2I	RGCGCY	2 cut(s)	578, 593
BstHHI	GCGC	5 cut(s)	61, 73, 285, 577, 592
BstKTI	GATC	2 cut(s)	22, 28
BstMAI	GTCTC	1 cut(s)	165
BstMBI	GATC	2 cut(s)	19, 25
BstMCI	CGRYCG	1 cut(s)	232
BstMWI	GCNNNNNNNGC	6 cut(s)	96, 228, 234, 574, 596, 639
BstNI	CCWGG	3 cut(s)	54, 402, 699
BstPAI	GACNNNNGTC	1 cut(s)	272
BstPI	GGTNACC	1 cut(s)	208
BstSCI	CCNGG	4 cut(s)	52, 94, 400, 697
BstUI	CGCG	3 cut(s)	73, 228, 580
BstV1I	GCAGC	1 cut(s)	608
BstV2I	GAAGAC	1 cut(s)	603
BstZ17I	GTATAC	1 cut(s)	709
BstZI	CGGCCG	1 cut(s)	229
BsuRI	GGCC	8 cut(s)	79, 87, 231, 348, 414, 438, 472, 489
BtrI	CACGTC	1 cut(s)	159
BtsI	GCAGTG	3 cut(s)	262, 531, 643
BtsIMutI	CAGTG	4 cut(s)	262, 498, 531, 643
Cac8I	GCNNGC	5 cut(s)	220, 287, 291, 383, 594
CfoI	GCGC	5 cut(s)	61, 73, 285, 577, 592
Cfr10I	RCCGGY	3 cut(s)	348, 371, 407
Cfr13I	GGNCC	5 cut(s)	13, 85, 346, 470, 488
CseI	GACGC	2 cut(s)	149, 234
Csp6I	GTAC	1 cut(s)	327
CviAII	CATG	3 cut(s)	164, 521, 679
CviQI	GTAC	1 cut(s)	327
DdeI	CTNAG	1 cut(s)	248
DinI	GGCGCC	1 cut(s)	591
DpnI	GATC	2 cut(s)	21, 27
DpnII	GATC	2 cut(s)	19, 25
EaeI	YGGCCR	2 cut(s)	229, 436
EagI	CGGCCG	1 cut(s)	229
Eam1104I	CTCTTC	1 cut(s)	546
EarI	CTCTTC	1 cut(s)	546
EclXI	CGGCCG	1 cut(s)	229
Eco130I	CCWWGG	1 cut(s)	439
Eco147I	AGGCCT	1 cut(s)	79
Eco24I	GRGCYC	1 cut(s)	156
Eco47I	GGWCC	1 cut(s)	13
Eco52I	CGGCCG	1 cut(s)	229
Eco57I	CTGAAG	2 cut(s)	468, 555
Eco72I	CACGTG	1 cut(s)	378
Eco88I	CYCGRG	1 cut(s)	81
Eco91I	GGTNACC	1 cut(s)	208
EcoO109I	RGGNCCY	1 cut(s)	470
EcoO65I	GGTNACC	1 cut(s)	208
EcoRII	CCWGG	3 cut(s)	52, 400, 697
EcoT14I	CCWWGG	1 cut(s)	439
EcoT38I	GRGCYC	1 cut(s)	156
EgeI	GGCGCC	1 cut(s)	591
EheI	GGCGCC	1 cut(s)	591
ErhI	CCWWGG	1 cut(s)	439
Esp3I	CGTCTC	1 cut(s)	165
FaeI	CATG	3 cut(s)	167, 524, 682
FaiI	YATR	9 cut(s)	128, 165, 368, 424, 522, 531, 654, 680, 709
FatI	CATG	3 cut(s)	163, 520, 678
FblI	GTMKAC	1 cut(s)	708
Fnu4HI	GCNGC	9 cut(s)	88, 229, 436, 542, 578, 597, 600, 631, 634
FriOI	GRGCYC	1 cut(s)	156
Fsp4HI	GCNGC	9 cut(s)	88, 229, 436, 542, 578, 597, 600, 631, 634
FspBI	CTAG	1 cut(s)	170
GlaI	GCGC	5 cut(s)	60, 72, 284, 576, 591
GluI	GCNGC	9 cut(s)	88, 229, 436, 542, 578, 597, 600, 631, 634
GsuI	CTGGAG	3 cut(s)	423, 474, 566
HaeII	RGCGCY	2 cut(s)	578, 593
HaeIII	GGCC	8 cut(s)	79, 87, 231, 348, 414, 438, 472, 489
HapII	CCGG	5 cut(s)	96, 183, 349, 372, 408
HgaI	GACGC	2 cut(s)	149, 234
HhaI	GCGC	5 cut(s)	61, 73, 285, 577, 592
Hin1I	GRCGYC	2 cut(s)	141, 590
Hin1II	CATG	3 cut(s)	167, 524, 682
Hin6I	GCGC	5 cut(s)	59, 71, 283, 575, 590
HinP1I	GCGC	5 cut(s)	59, 71, 283, 575, 590
HincII	GTYRAC	1 cut(s)	199
HindII	GTYRAC	1 cut(s)	199
HinfI	GANTC	2 cut(s)	200, 358
HpaII	CCGG	5 cut(s)	96, 183, 349, 372, 408
HphI	GGTGA	6 cut(s)	220, 268, 277, 303, 656, 713
Hpy166II	GTNNAC	2 cut(s)	199, 709
Hpy188I	TCNGA	3 cut(s)	190, 319, 429
Hpy188III	TCNNGA	7 cut(s)	6, 23, 29, 137, 170, 334, 615
Hpy8I	GTNNAC	2 cut(s)	199, 709
Hpy99I	CGWCG	1 cut(s)	228
HpyAV	CCTTC	1 cut(s)	579
HpyCH4III	ACNGT	4 cut(s)	301, 315, 331, 609
HpyCH4IV	ACGT	2 cut(s)	158, 377
HpyCH4V	TGCA	3 cut(s)	35, 47, 524
HpyF10VI	GCNNNNNNNGC	6 cut(s)	96, 228, 234, 574, 596, 639
HpyF3I	CTNAG	1 cut(s)	248
HpySE526I	ACGT	2 cut(s)	158, 377
Hsp92I	GRCGYC	2 cut(s)	141, 590
Hsp92II	CATG	3 cut(s)	167, 524, 682
HspAI	GCGC	5 cut(s)	59, 71, 283, 575, 590
KasI	GGCGCC	1 cut(s)	589
Kzo9I	GATC	2 cut(s)	19, 25
LmnI	GCTCC	1 cut(s)	404
Lsp1109I	GCAGC	1 cut(s)	608
LweI	GCATC	1 cut(s)	22
MaeI	CTAG	1 cut(s)	170
MaeII	ACGT	2 cut(s)	158, 377
MaeIII	GTNAC	6 cut(s)	208, 265, 274, 334, 619, 664
MalI	GATC	2 cut(s)	21, 27
MboI	GATC	2 cut(s)	19, 25
MboII	GAAGA	3 cut(s)	171, 563, 603
MhlI	GDGCHC	1 cut(s)	156
MluCI	AATT	1 cut(s)	655
Mly113I	GGCGCC	1 cut(s)	590
MlyI	GAGTC	1 cut(s)	194
MspA1I	CMGCKG	2 cut(s)	544, 599
MspI	CCGG	5 cut(s)	96, 183, 349, 372, 408
MspR9I	CCNGG	4 cut(s)	54, 96, 402, 699
MvaI	CCWGG	3 cut(s)	54, 402, 699
MvnI	CGCG	3 cut(s)	73, 228, 580
MwoI	GCNNNNNNNGC	6 cut(s)	96, 228, 234, 574, 596, 639
NarI	GGCGCC	1 cut(s)	590
NciI	CCSGG	1 cut(s)	96
NdeII	GATC	2 cut(s)	19, 25
NlaIII	CATG	3 cut(s)	167, 524, 682
NlaIV	GGNNCC	5 cut(s)	15, 86, 406, 471, 591
NmeAIII	GCCGAG	2 cut(s)	47, 257
NmuCI	GTSAC	6 cut(s)	208, 265, 274, 334, 619, 664
PceI	AGGCCT	1 cut(s)	79
PfeI	GAWTC	1 cut(s)	358
PkrI	GCNGC	9 cut(s)	89, 230, 437, 543, 579, 598, 601, 632, 635
PleI	GAGTC	1 cut(s)	194
PluTI	GGCGCC	1 cut(s)	593
PmaCI	CACGTG	1 cut(s)	378
PmlI	CACGTG	1 cut(s)	378
PpsI	GAGTC	1 cut(s)	194
Ppu21I	YACGTR	1 cut(s)	378
PshAI	GACNNNNGTC	1 cut(s)	272
PsiI	TTATAA	1 cut(s)	654
Psp6I	CCWGG	3 cut(s)	52, 400, 697
PspCI	CACGTG	1 cut(s)	378
PspEI	GGTNACC	1 cut(s)	208
PspGI	CCWGG	3 cut(s)	52, 400, 697
PspN4I	GGNNCC	5 cut(s)	15, 86, 406, 471, 591
PspPI	GGNCC	5 cut(s)	13, 85, 346, 470, 488
RsaI	GTAC	1 cut(s)	328
RsaNI	GTAC	1 cut(s)	327
SatI	GCNGC	9 cut(s)	88, 229, 436, 542, 578, 597, 600, 631, 634
Sau3AI	GATC	2 cut(s)	19, 25
Sau96I	GGNCC	5 cut(s)	13, 85, 346, 470, 488
SchI	GAGTC	1 cut(s)	194
ScrFI	CCNGG	4 cut(s)	54, 96, 402, 699
SduI	GDGCHC	1 cut(s)	156
SetI	ASST	9 cut(s)	58, 161, 215, 281, 380, 403, 450, 539, 628
SfaNI	GCATC	1 cut(s)	22
SfoI	GGCGCC	1 cut(s)	591
SinI	GGWCC	1 cut(s)	13
SmlI	CTYRAG	1 cut(s)	135
SmoI	CTYRAG	1 cut(s)	135
Sse9I	AATT	1 cut(s)	655
SseBI	AGGCCT	1 cut(s)	79
SspDI	GGCGCC	1 cut(s)	589
SspMI	CTAG	1 cut(s)	170
StuI	AGGCCT	1 cut(s)	79
StyD4I	CCNGG	4 cut(s)	52, 94, 400, 697
StyI	CCWWGG	1 cut(s)	439
TaaI	ACNGT	4 cut(s)	301, 315, 331, 609
TaiI	ACGT	2 cut(s)	161, 380
TasI	AATT	1 cut(s)	655
TauI	GCSGC	8 cut(s)	90, 231, 438, 544, 580, 602, 633, 636
TfiI	GAWTC	1 cut(s)	358
TscAI	CASTG	4 cut(s)	262, 498, 531, 643
TseFI	GTSAC	6 cut(s)	208, 265, 274, 334, 619, 664
TseI	GCWGC	1 cut(s)	596
Tsp45I	GTSAC	6 cut(s)	208, 265, 274, 334, 619, 664
TspDTI	ATGAA	1 cut(s)	501
TspRI	CASTG	4 cut(s)	262, 498, 531, 643
VpaK11BI	GGWCC	1 cut(s)	13
XbaI	TCTAGA	1 cut(s)	169
XcmI	CCANNNNNNNNNTGG	1 cut(s)	676
XmiI	GTMKAC	1 cut(s)	708
XspI	CTAG	1 cut(s)	170

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.