Small ubiquitin-related modifier
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26840 |
| fragaria_vesca | FvH4_2g18770 |
| malus_domestica | MD10G1161600.v1.1 |
| prunus_persica | Prupe.8G201100_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0284511 |
| rosa_multiflora | Rmu_sc0005257.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00184650 |
| rosa_rugosa | Rorug06G0163900 |
| rosa_samantha | Rh6DG271400 |
| rosa_wichuraiana | Rw6G023780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 60 |
| AcoI | YGGCCR | 1 cut(s) | 205 |
| AcuI | CTGAAG | 1 cut(s) | 94 |
| AgsI | TTSAA | 1 cut(s) | 136 |
| AjnI | CCWGG | 1 cut(s) | 46 |
| AluBI | AGCT | 2 cut(s) | 142, 241 |
| AluI | AGCT | 2 cut(s) | 142, 241 |
| AlwI | GGATC | 1 cut(s) | 60 |
| AoxI | GGCC | 1 cut(s) | 205 |
| ApeKI | GCWGC | 1 cut(s) | 277 |
| AsuC2I | CCSGG | 1 cut(s) | 218 |
| AsuHPI | GGTGA | 2 cut(s) | 32, 269 |
| BbvI | GCAGC | 1 cut(s) | 264 |
| BccI | CCATC | 5 cut(s) | 17, 86, 197, 241, 248 |
| BceAI | ACGGC | 1 cut(s) | 192 |
| BciT130I | CCWGG | 1 cut(s) | 48 |
| BcnI | CCSGG | 1 cut(s) | 218 |
| BisI | GCNGC | 1 cut(s) | 278 |
| BlsI | GCNGC | 1 cut(s) | 279 |
| Bme1390I | CCNGG | 2 cut(s) | 48, 218 |
| BmiI | GGNNCC | 1 cut(s) | 215 |
| BmrFI | CCNGG | 2 cut(s) | 48, 218 |
| BmrI | ACTGGG | 1 cut(s) | 124 |
| BmsI | GCATC | 1 cut(s) | 259 |
| BmuI | ACTGGG | 1 cut(s) | 124 |
| BpmI | CTGGAG | 2 cut(s) | 216, 263 |
| BpuMI | CCSGG | 1 cut(s) | 218 |
| BsaJI | CCNNGG | 1 cut(s) | 47 |
| Bse1I | ACTGG | 2 cut(s) | 130, 292 |
| Bse3DI | GCAATG | 2 cut(s) | 103, 279 |
| BseBI | CCWGG | 1 cut(s) | 48 |
| BseDI | CCNNGG | 1 cut(s) | 47 |
| BseGI | GGATG | 1 cut(s) | 97 |
| BseMI | GCAATG | 2 cut(s) | 103, 279 |
| BseNI | ACTGG | 2 cut(s) | 130, 292 |
| BseRI | GAGGAG | 1 cut(s) | 251 |
| BseXI | GCAGC | 1 cut(s) | 264 |
| BsgI | GTGCAG | 1 cut(s) | 263 |
| BshFI | GGCC | 1 cut(s) | 207 |
| BsiSI | CCGG | 1 cut(s) | 217 |
| BsnI | GGCC | 1 cut(s) | 207 |
| Bsp143I | GATC | 2 cut(s) | 52, 160 |
| BspANI | GGCC | 1 cut(s) | 207 |
| BspHI | TCATGA | 1 cut(s) | 144 |
| BspLI | GGNNCC | 1 cut(s) | 215 |
| BspPI | GGATC | 1 cut(s) | 60 |
| BsrDI | GCAATG | 2 cut(s) | 103, 279 |
| BsrI | ACTGG | 2 cut(s) | 130, 292 |
| BssECI | CCNNGG | 1 cut(s) | 47 |
| BssMI | GATC | 2 cut(s) | 52, 160 |
| Bst2UI | CCWGG | 1 cut(s) | 48 |
| Bst4CI | ACNGT | 1 cut(s) | 158 |
| Bst6I | CTCTTC | 1 cut(s) | 30 |
| BstF5I | GGATG | 1 cut(s) | 97 |
| BstKTI | GATC | 2 cut(s) | 55, 163 |
| BstMBI | GATC | 2 cut(s) | 52, 160 |
| BstNI | CCWGG | 1 cut(s) | 48 |
| BstSCI | CCNGG | 2 cut(s) | 46, 216 |
| BstV1I | GCAGC | 1 cut(s) | 264 |
| BsuRI | GGCC | 1 cut(s) | 207 |
| BtsCI | GGATG | 1 cut(s) | 97 |
| CciI | TCATGA | 1 cut(s) | 144 |
| CviAII | CATG | 2 cut(s) | 145, 178 |
| CviJI | RGCY | 5 cut(s) | 62, 142, 207, 214, 241 |
| CviKI_1 | RGCY | 5 cut(s) | 62, 142, 207, 214, 241 |
| DpnI | GATC | 2 cut(s) | 54, 162 |
| DpnII | GATC | 2 cut(s) | 52, 160 |
| EaeI | YGGCCR | 1 cut(s) | 205 |
| Eam1104I | CTCTTC | 1 cut(s) | 30 |
| EarI | CTCTTC | 1 cut(s) | 30 |
| Eco57I | CTGAAG | 1 cut(s) | 94 |
| EcoRII | CCWGG | 1 cut(s) | 46 |
| FaeI | CATG | 2 cut(s) | 148, 181 |
| FaiI | YATR | 2 cut(s) | 146, 179 |
| FatI | CATG | 2 cut(s) | 144, 177 |
| Fnu4HI | GCNGC | 1 cut(s) | 278 |
| FokI | GGATG | 1 cut(s) | 104 |
| Fsp4HI | GCNGC | 1 cut(s) | 278 |
| GluI | GCNGC | 1 cut(s) | 278 |
| GsuI | CTGGAG | 2 cut(s) | 216, 263 |
| HaeIII | GGCC | 1 cut(s) | 207 |
| HapII | CCGG | 1 cut(s) | 217 |
| Hin1II | CATG | 2 cut(s) | 148, 181 |
| HincII | GTYRAC | 1 cut(s) | 175 |
| HindII | GTYRAC | 1 cut(s) | 175 |
| HinfI | GANTC | 2 cut(s) | 114, 229 |
| HpaII | CCGG | 1 cut(s) | 217 |
| HphI | GGTGA | 2 cut(s) | 32, 269 |
| Hpy166II | GTNNAC | 1 cut(s) | 175 |
| Hpy188I | TCNGA | 1 cut(s) | 113 |
| Hpy188III | TCNNGA | 3 cut(s) | 89, 145, 233 |
| Hpy8I | GTNNAC | 1 cut(s) | 175 |
| HpyAV | CCTTC | 1 cut(s) | 202 |
| HpyCH4III | ACNGT | 1 cut(s) | 158 |
| HpyCH4V | TGCA | 3 cut(s) | 8, 272, 280 |
| Hsp92II | CATG | 2 cut(s) | 148, 181 |
| Kzo9I | GATC | 2 cut(s) | 52, 160 |
| LmnI | GCTCC | 2 cut(s) | 219, 238 |
| LpnPI | CCDG | 9 cut(s) | 14, 33, 60, 74, 143, 227, 230, 246, 273 |
| Lsp1109I | GCAGC | 1 cut(s) | 264 |
| LweI | GCATC | 1 cut(s) | 259 |
| MalI | GATC | 2 cut(s) | 54, 162 |
| MboI | GATC | 2 cut(s) | 52, 160 |
| MboII | GAAGA | 5 cut(s) | 47, 52, 100, 148, 263 |
| MlyI | GAGTC | 1 cut(s) | 223 |
| MnlI | CCTC | 5 cut(s) | 8, 83, 94, 229, 284 |
| MseI | TTAA | 1 cut(s) | 69 |
| MspI | CCGG | 1 cut(s) | 217 |
| MspR9I | CCNGG | 2 cut(s) | 48, 218 |
| MvaI | CCWGG | 1 cut(s) | 48 |
| NciI | CCSGG | 1 cut(s) | 218 |
| NdeII | GATC | 2 cut(s) | 52, 160 |
| NlaIII | CATG | 2 cut(s) | 148, 181 |
| NlaIV | GGNNCC | 1 cut(s) | 215 |
| PagI | TCATGA | 1 cut(s) | 144 |
| PfeI | GAWTC | 1 cut(s) | 114 |
| PkrI | GCNGC | 1 cut(s) | 279 |
| PleI | GAGTC | 1 cut(s) | 223 |
| PpsI | GAGTC | 1 cut(s) | 223 |
| Psp6I | CCWGG | 1 cut(s) | 46 |
| PspGI | CCWGG | 1 cut(s) | 46 |
| PspN4I | GGNNCC | 1 cut(s) | 215 |
| SaqAI | TTAA | 1 cut(s) | 69 |
| SatI | GCNGC | 1 cut(s) | 278 |
| Sau3AI | GATC | 2 cut(s) | 52, 160 |
| SchI | GAGTC | 1 cut(s) | 223 |
| ScrFI | CCNGG | 2 cut(s) | 48, 218 |
| SetI | ASST | 5 cut(s) | 19, 75, 105, 144, 243 |
| SfaNI | GCATC | 1 cut(s) | 259 |
| StyD4I | CCNGG | 2 cut(s) | 46, 216 |
| TaaI | ACNGT | 1 cut(s) | 158 |
| TaqI | TCGA | 1 cut(s) | 185 |
| TfiI | GAWTC | 1 cut(s) | 114 |
| Tru1I | TTAA | 1 cut(s) | 69 |
| Tru9I | TTAA | 1 cut(s) | 69 |
| TseI | GCWGC | 1 cut(s) | 277 |
| TspDTI | ATGAA | 1 cut(s) | 194 |