Prupe.8G234000_v2.0.a1

Calmodulin-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
20741871 .. 20743397
1527 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G234000.1

Sequence Viewer

Length: 447 bp
ATGGCAGAGGCATTAACAGAAGCTCAGATTTCTGAGTTCCAGGAAGCCTTTTGTCTAATTGACAAGGATTCAGATGGGCTAATTTCCTTGGAAGAACTAGCGGCAGTGATCCAATCACTGGACGAACATCCCACAAAAGAAGAAATCCAAGACATGATCAACGAAGTTGGTGCCGAGGGAAATGGGACAATAGATTGTGAAGAGTTCTTGAATATTATGGCAAGAAAGATGAAGGAAAATGTTGCTGAGGAGCTGAAAGAAGCCTTCAAAGTATTTGACAGAGACCAAGATGGCTATATTTCAGCCAATGAGTTGAGGCAAGTTATGATAAACTTGGGAGAAAAATTGAGTGATGAGGAGGCTGAGCAAATGATCAGAGAGGCTGATGTAGATGGTGATGGTCTTGTTAGCTATGAAGAATTTGCAAGGATGATGATGCTCAGTTGA

Protein Analysis

149

Amino Acids

16.69

Weight (kDa)

4.05

Isoelectric Point (pI)

36.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015499)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G14640
fragaria_vesca FvH4_2g22870
malus_domestica MD03G1257100.v1.1 MD11G1277800.v1.1
prunus_persica Prupe.8G234000_v2.0.a1
pyrus_communis pycom03g20380 pycom11g24560
rosa_chinensis RchiOBHm_Chr6g0289811
rosa_laevigata RLG00000012266
rosa_roxburghii Rroxscaffold_7G00177540 Rroxscaffold_7G00178060
rosa_rugosa Rorug06G0207100
rosa_samantha Rh6BG325800 Rh6CG331800 Rh6DG317100
rosa_wichuraiana Rw6G027480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 170
AccB7I CCANNNNNTGG 1 cut(s) 118
AciI CCGC 1 cut(s) 101
AclWI GGATC 1 cut(s) 103
AcsI RAATTY 1 cut(s) 419
AfiI CCNNNNNNNGG 1 cut(s) 118
AgsI TTSAA 2 cut(s) 211, 268
AjnI CCWGG 1 cut(s) 39
AluBI AGCT 3 cut(s) 23, 253, 411
AluI AGCT 3 cut(s) 23, 253, 411
Alw26I GTCTC 1 cut(s) 276
AlwI GGATC 1 cut(s) 103
ApoI RAATTY 1 cut(s) 419
AsuHPI GGTGA 1 cut(s) 407
BanI GGYRCC 1 cut(s) 170
BbvCI CCTCAGC 1 cut(s) 246
BccI CCATC 4 cut(s) 68, 284, 386, 392
BcgI CGANNNNNNTGC 2 cut(s) 152, 186
BciT130I CCWGG 1 cut(s) 41
BclI TGATCA 2 cut(s) 156, 372
BcoDI GTCTC 1 cut(s) 276
BfaI CTAG 1 cut(s) 98
BisI GCNGC 1 cut(s) 102
BlpI GCTNAGC 1 cut(s) 363
BlsI GCNGC 1 cut(s) 103
Bme1390I CCNGG 1 cut(s) 41
BmiI GGNNCC 1 cut(s) 172
BmrFI CCNGG 1 cut(s) 41
BmsI GCATC 1 cut(s) 426
Bpu10I CCTNAGC 1 cut(s) 246
Bpu1102I GCTNAGC 1 cut(s) 363
BsaI GGTCTC 1 cut(s) 276
BsaJI CCNNGG 2 cut(s) 87, 174
Bsc4I CCNNNNNNNGG 1 cut(s) 118
Bse1I ACTGG 1 cut(s) 123
BseBI CCWGG 1 cut(s) 41
BseDI CCNNGG 2 cut(s) 87, 174
BseGI GGATG 2 cut(s) 127, 435
BseLI CCNNNNNNNGG 1 cut(s) 118
BseMII CTCAG 4 cut(s) 24, 38, 237, 354
BseNI ACTGG 1 cut(s) 123
BseRI GAGGAG 2 cut(s) 263, 371
BshNI GGYRCC 1 cut(s) 170
BslFI GGGAC 1 cut(s) 199
BslI CCNNNNNNNGG 1 cut(s) 118
BsmAI GTCTC 1 cut(s) 276
BsmFI GGGAC 1 cut(s) 199
Bso31I GGTCTC 1 cut(s) 276
Bsp143I GATC 3 cut(s) 108, 156, 372
Bsp1720I GCTNAGC 1 cut(s) 363
BspACI CCGC 1 cut(s) 101
BspCNI CTCAG 4 cut(s) 25, 37, 238, 355
BspLI GGNNCC 1 cut(s) 172
BspPI GGATC 1 cut(s) 103
BspT107I GGYRCC 1 cut(s) 170
BspTNI GGTCTC 1 cut(s) 276
BsrI ACTGG 1 cut(s) 123
BssECI CCNNGG 2 cut(s) 87, 174
BssMI GATC 3 cut(s) 108, 156, 372
BssT1I CCWWGG 1 cut(s) 87
Bst2UI CCWGG 1 cut(s) 41
Bst6I CTCTTC 1 cut(s) 195
BstDEI CTNAG 5 cut(s) 24, 33, 246, 363, 440
BstF5I GGATG 2 cut(s) 127, 435
BstKTI GATC 3 cut(s) 111, 159, 375
BstMAI GTCTC 1 cut(s) 276
BstMBI GATC 3 cut(s) 108, 156, 372
BstNI CCWGG 1 cut(s) 41
BstSCI CCNGG 1 cut(s) 39
BtsCI GGATG 2 cut(s) 127, 435
BtsI GCAGTG 1 cut(s) 111
BtsIMutI CAGTG 2 cut(s) 111, 116
CviAII CATG 1 cut(s) 154
DdeI CTNAG 5 cut(s) 24, 33, 246, 363, 440
DpnI GATC 3 cut(s) 110, 158, 374
DpnII GATC 3 cut(s) 108, 156, 372
Eam1104I CTCTTC 1 cut(s) 195
EarI CTCTTC 1 cut(s) 195
Eco130I CCWWGG 1 cut(s) 87
Eco31I GGTCTC 1 cut(s) 276
EcoRII CCWGG 1 cut(s) 39
EcoT14I CCWWGG 1 cut(s) 87
ErhI CCWWGG 1 cut(s) 87
FaeI CATG 1 cut(s) 157
FaiI YATR 5 cut(s) 155, 218, 297, 326, 414
FaqI GGGAC 1 cut(s) 199
FatI CATG 1 cut(s) 153
FbaI TGATCA 2 cut(s) 156, 372
Fnu4HI GCNGC 1 cut(s) 102
FokI GGATG 2 cut(s) 114, 442
Fsp4HI GCNGC 1 cut(s) 102
FspBI CTAG 1 cut(s) 98
GluI GCNGC 1 cut(s) 102
Hin1II CATG 1 cut(s) 157
HinfI GANTC 1 cut(s) 68
HphI GGTGA 1 cut(s) 407
Hpy188I TCNGA 4 cut(s) 27, 34, 73, 377
Hpy188III TCNNGA 1 cut(s) 208
HpyAV CCTTC 2 cut(s) 226, 274
HpyCH4V TGCA 1 cut(s) 425
HpyF3I CTNAG 5 cut(s) 24, 33, 246, 363, 440
Hsp92II CATG 1 cut(s) 157
Ksp22I TGATCA 2 cut(s) 156, 372
Kzo9I GATC 3 cut(s) 108, 156, 372
LmnI GCTCC 1 cut(s) 250
LpnPI CCDG 3 cut(s) 26, 53, 104
LweI GCATC 1 cut(s) 426
MaeI CTAG 1 cut(s) 98
MalI GATC 3 cut(s) 110, 158, 374
MboI GATC 3 cut(s) 108, 156, 372
MboII GAAGA 4 cut(s) 104, 152, 212, 428
MluCI AATT 4 cut(s) 57, 81, 344, 419
MnlI CCTC 6 cut(s) 169, 241, 309, 349, 352, 373
MseI TTAA 1 cut(s) 14
MspR9I CCNGG 1 cut(s) 41
MvaI CCWGG 1 cut(s) 41
NdeII GATC 3 cut(s) 108, 156, 372
NlaIII CATG 1 cut(s) 157
NlaIV GGNNCC 1 cut(s) 172
NmeAIII GCCGAG 1 cut(s) 199
PfeI GAWTC 1 cut(s) 68
PflMI CCANNNNNTGG 1 cut(s) 118
PfoI TCCNGGA 1 cut(s) 39
PkrI GCNGC 1 cut(s) 103
Psp6I CCWGG 1 cut(s) 39
PspGI CCWGG 1 cut(s) 39
PspN4I GGNNCC 1 cut(s) 172
SaqAI TTAA 1 cut(s) 14
SatI GCNGC 1 cut(s) 102
Sau3AI GATC 3 cut(s) 108, 156, 372
ScrFI CCNGG 1 cut(s) 41
SetI ASST 3 cut(s) 25, 255, 413
SfaNI GCATC 1 cut(s) 426
Sse9I AATT 4 cut(s) 57, 81, 344, 419
SsiI CCGC 1 cut(s) 101
SspI AATATT 1 cut(s) 214
SspMI CTAG 1 cut(s) 98
StyD4I CCNGG 1 cut(s) 39
StyI CCWWGG 1 cut(s) 87
TasI AATT 4 cut(s) 57, 81, 344, 419
TauI GCSGC 1 cut(s) 104
TfiI GAWTC 1 cut(s) 68
Tru1I TTAA 1 cut(s) 14
Tru9I TTAA 1 cut(s) 14
TscAI CASTG 2 cut(s) 111, 123
TspDTI ATGAA 2 cut(s) 245, 429
TspRI CASTG 2 cut(s) 111, 123
Van91I CCANNNNNTGG 1 cut(s) 118
XapI RAATTY 1 cut(s) 419
XspI CTAG 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.