Prupe.8G237700_v2.0.a1

pollen allergen Ole e 6-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
20968470 .. 20969539
1070 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G237700.1

Sequence Viewer

Length: 237 bp
ATGGCCAAGAAGCTTGTTGCAGTGTTTCTCATGTTGGTGGTGGTTGTTGCAGCACTCCACATTCGGGAGGCTGAGGCAGAAGACGGTGATCACAAGGAATACAAGGAGTGCTTCGGCAACTGCTTGAAGGAATGCGAAGACGGCGACGCCCACGGTCAAACTTACTGTGAGATGAGCTGTGACACTGAATGTGCACTTAGAGAGAGTGCCGAAAGGCTGAAGAATATCAAAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

79

Amino Acids

8.74

Weight (kDa)

4.95

Isoelectric Point (pI)

58.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017989)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g23202 FvH4_2g23781
prunus_persica Prupe.8G237700_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0290471
rosa_laevigata RLG00000012212
rosa_rugosa Rorug06G0218700
rosa_samantha Rh6AG323200 Rh6BG330400 Rh6CG336700 Rh6DG323600
rosa_wichuraiana Rw6G028020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 3
AcyI GRCGYC 1 cut(s) 147
AfiI CCNNNNNNNGG 1 cut(s) 64
AgsI TTSAA 1 cut(s) 127
AluBI AGCT 2 cut(s) 13, 177
AluI AGCT 2 cut(s) 13, 177
Alw21I GWGCWC 1 cut(s) 196
Alw44I GTGCAC 1 cut(s) 192
AoxI GGCC 1 cut(s) 3
ApaLI GTGCAC 1 cut(s) 192
ApeKI GCWGC 1 cut(s) 50
AsuHPI GGTGA 1 cut(s) 98
BaeGI GKGCMC 1 cut(s) 196
BalI TGGCCA 1 cut(s) 5
BbsI GAAGAC 2 cut(s) 87, 144
Bbv12I GWGCWC 1 cut(s) 196
BbvCI CCTCAGC 1 cut(s) 72
BbvI GCAGC 1 cut(s) 62
BceAI ACGGC 1 cut(s) 157
BclI TGATCA 1 cut(s) 88
BisI GCNGC 1 cut(s) 51
BlsI GCNGC 1 cut(s) 52
BpiI GAAGAC 2 cut(s) 87, 144
Bpu10I CCTNAGC 1 cut(s) 72
BsaHI GRCGYC 1 cut(s) 147
BsaJI CCNNGG 1 cut(s) 151
Bsc4I CCNNNNNNNGG 1 cut(s) 64
BseDI CCNNGG 1 cut(s) 151
BseLI CCNNNNNNNGG 1 cut(s) 64
BseMII CTCAG 1 cut(s) 63
BseSI GKGCMC 1 cut(s) 196
BseXI GCAGC 1 cut(s) 62
BshFI GGCC 1 cut(s) 5
BsiHKAI GWGCWC 1 cut(s) 196
BslI CCNNNNNNNGG 1 cut(s) 64
BsmI GAATGC 1 cut(s) 137
BsnI GGCC 1 cut(s) 5
Bsp1286I GDGCHC 1 cut(s) 196
Bsp143I GATC 1 cut(s) 88
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 1 cut(s) 64
BssECI CCNNGG 1 cut(s) 151
BssMI GATC 1 cut(s) 88
BssNI GRCGYC 1 cut(s) 147
Bst4CI ACNGT 3 cut(s) 86, 155, 167
BstACI GRCGYC 1 cut(s) 147
BstDEI CTNAG 2 cut(s) 72, 197
BstDSI CCRYGG 1 cut(s) 151
BstKTI GATC 1 cut(s) 91
BstMBI GATC 1 cut(s) 88
BstMWI GCNNNNNNNGC 1 cut(s) 141
BstSLI GKGCMC 1 cut(s) 196
BstV1I GCAGC 1 cut(s) 62
BstV2I GAAGAC 2 cut(s) 87, 144
BsuRI GGCC 1 cut(s) 5
BtgI CCRYGG 1 cut(s) 151
BtsI GCAGTG 1 cut(s) 27
BtsIMutI CAGTG 2 cut(s) 27, 183
CseI GACGC 1 cut(s) 155
CviAII CATG 1 cut(s) 31
CviJI RGCY 5 cut(s) 5, 13, 71, 177, 217
CviKI_1 RGCY 5 cut(s) 5, 13, 71, 177, 217
DdeI CTNAG 2 cut(s) 72, 197
DpnI GATC 1 cut(s) 90
DpnII GATC 1 cut(s) 88
EaeI YGGCCR 1 cut(s) 3
FaeI CATG 1 cut(s) 34
FaiI YATR 1 cut(s) 32
FalI AAGNNNNNCTT 2 cut(s) 95, 127
FatI CATG 1 cut(s) 30
FbaI TGATCA 1 cut(s) 88
Fnu4HI GCNGC 1 cut(s) 51
Fsp4HI GCNGC 1 cut(s) 51
GluI GCNGC 1 cut(s) 51
HaeIII GGCC 1 cut(s) 5
HgaI GACGC 1 cut(s) 155
Hin1I GRCGYC 1 cut(s) 147
Hin1II CATG 1 cut(s) 34
HindIII AAGCTT 1 cut(s) 11
HphI GGTGA 1 cut(s) 98
Hpy166II GTNNAC 1 cut(s) 194
Hpy188III TCNNGA 1 cut(s) 65
Hpy8I GTNNAC 1 cut(s) 194
Hpy99I CGWCG 1 cut(s) 149
HpyAV CCTTC 1 cut(s) 121
HpyCH4III ACNGT 3 cut(s) 86, 155, 167
HpyCH4V TGCA 3 cut(s) 20, 50, 194
HpyF10VI GCNNNNNNNGC 1 cut(s) 141
HpyF3I CTNAG 2 cut(s) 72, 197
Hsp92I GRCGYC 1 cut(s) 147
Hsp92II CATG 1 cut(s) 34
Ksp22I TGATCA 1 cut(s) 88
Kzo9I GATC 1 cut(s) 88
Lsp1109I GCAGC 1 cut(s) 62
MaeIII GTNAC 1 cut(s) 179
MalI GATC 1 cut(s) 90
MboI GATC 1 cut(s) 88
MboII GAAGA 3 cut(s) 92, 149, 232
MhlI GDGCHC 1 cut(s) 196
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MnlI CCTC 2 cut(s) 61, 67
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MslI CAYNNNNRTG 1 cut(s) 35
Msp20I TGGCCA 1 cut(s) 5
Mva1269I GAATGC 1 cut(s) 137
MwoI GCNNNNNNNGC 1 cut(s) 141
NdeII GATC 1 cut(s) 88
NlaIII CATG 1 cut(s) 34
NmuCI GTSAC 1 cut(s) 179
PctI GAATGC 1 cut(s) 137
PkrI GCNGC 1 cut(s) 52
RseI CAYNNNNRTG 1 cut(s) 35
SatI GCNGC 1 cut(s) 51
Sau3AI GATC 1 cut(s) 88
SduI GDGCHC 1 cut(s) 196
SetI ASST 2 cut(s) 15, 179
SgeI CNNG 8 cut(s) 19, 26, 43, 77, 106, 115, 136, 164
SmiMI CAYNNNNRTG 1 cut(s) 35
TaaI ACNGT 3 cut(s) 86, 155, 167
TscAI CASTG 2 cut(s) 27, 190
TseFI GTSAC 1 cut(s) 179
TseI GCWGC 1 cut(s) 50
Tsp45I GTSAC 1 cut(s) 179
TspRI CASTG 2 cut(s) 27, 190
VneI GTGCAC 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.