Prupe.8G243000_v2.0.a1

mRNA-capping enzyme-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
21215208 .. 21220521
5314 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G243000.2

Sequence Viewer

Length: 1860 bp
ATGGATGGAGAAGAAAGAAGCTTGGGCTTGAAAAGAAAGAACCCATATCAGGATTCTGGGTTTCAAAGTAGGAACCATCAAGCTTTTGATAGACACATGCTTCCTGAAGGTTGGGTGGGTTGCCCTGCATATGGTGAAGAAATAAGTTGTATAATTCCTTCAAAAGTACCGCTTGGTGAGTCTTTCAAGGATCATATTCGTGGTGAAACATACACTCCAAAGCAAGTCATTCATCAACAAAGACTTCTAGGAAGAGAACTTGGTTTAGTGATTGATTTAACAAACACTACTCGTTACTATCCCGTTTCGGATTGGACAAAAGAAGGCATTCGTCATGTTAAGATACAATGCAGAGGAAGGGATTCCGTACCTGATAATGTAGCTGTAGATAAATTTCTCTATGAGGTATCACAATTTTTCTCCCATAGAGCTGACCCAACGGAGTGTATACTTGTCCACTGTACACATGGGCATAACCGCACCGGTTTCATGATTGTTCATTTTCTTGTGCGTAACGAATCAATTTCTGTTACTGAGGCAATAAATAAATTTGCCAAGGCACGGCATCCAGGAATATATAAACAGGACTATATTGATGAACTTTACATGTTTTATCATGAACGAAAGCCGGAATCAGTTGTTTGCCCACAAACTCCAGAGTGGAAGAGATGTTCCGATCTTGATGACAAGGCTGGAGCTGTGATGTATCAGGACAATGAAAATCACGTGAGAAATGAAGCAATGACAATTGATGATGTTTTGGGTGAACCAATACCTTTTGACCAGCAAAAAACGATGCGAGAAGCCTGTTATCATGCACTCAAGTTGGGTGCAGGGGGTAGAGGGAATTTACAATTTCCAGGGTCGCATCCTGTTTCGCTCAACAGGGACAACCAACAATTATTAAGGCAACGCTATTACTACGCCACATGGAAAGCTGATGGAACACGTTATATGATGCTAATTACTTGGGACGGCTGTTACTTGATTGATAGGAAATTTTGTTTCCGAAGGGTCCAGATGCGTTTTCCTTGCAAATTCTCAAATAAGGTTATACCTGAGAAGACTCACCACTTCACATTACTTGATGGAGAGATGATAATTGACACTGACCCAAATACTCATAAGCAAGAGAGAAGATACCTCATTTATGACGTCATGGCAATCAACCAACTCTCTCTCACAGAGTTGCCATTCCATGAACGGTGGAAAATGCTTGAAAAAGAAGTGATTGAGCCTCGAAATATGGAACGTGATACTCTTTCCAAGAGTCCAGAGCCTTATTACAGATATGACTTGGAACAATTCAGTGTGAGGAGGAAGGGTTTTTGGTTACTATCTACTGTTACAAAACTTTTGAGGAAATTCATTCCTGGGCTTTCACATGCATCTGATGGTCTGATATTCCAGGGCTGGGATGATCCATATGTACCCCGCACACATGAAGGTCTTTTGAAGTGGAAATTTCCTGAAATGAATTCAGTTGATTTTCTCTTTGAGTTAGGAGTTGATGGTCGGGAGCTACTTTTTCTGAATGAGCGTGGAAAGAAGAAGCTAATGGGAGGCTATAGGGTGGTTTTTAAAGATGAGCTCGACCCTGCTCTTTGTTCAGGGAAAATTATTGAGTGCTCCTGGGATGCAGAGGGAAATGTATGGGTGTGCATGCGGACTAGGCCAGACAAATCAACCCCAAATGAGTTCAATACCTATAAGAAGGTAATGCGAAGCATAAAGGATAATATCACGGAGGAAGTTTTGTTGAAGGAGATAGATCAGATTGTTCGGCTACCCATGTATGCTGACCGGATACGGAACGATATTAAGGCCCATGAGCACAATTCTTCTTCCCGGCGCCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

620

Amino Acids

72.65

Weight (kDa)

8.23

Isoelectric Point (pI)

43.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1158
AccB1I GGYRCC 1 cut(s) 1851
AccI GTMKAC 1 cut(s) 448
AciI CCGC 4 cut(s) 170, 478, 1435, 1666
AclWI GGATC 2 cut(s) 198, 1415
AcsI RAATTY 8 cut(s) 392, 548, 847, 998, 1037, 1364, 1463, 1477
AcuI CTGAAG 1 cut(s) 126
AcvI CACGTG 1 cut(s) 727
AcyI GRCGYC 2 cut(s) 1155, 1852
AfaI GTAC 4 cut(s) 168, 369, 463, 1431
AfiI CCNNNNNNNGG 5 cut(s) 49, 131, 561, 1414, 1854
AflIII ACRYGT 2 cut(s) 606, 947
AgeI ACCGGT 1 cut(s) 482
AgsI TTSAA 8 cut(s) 31, 65, 162, 187, 1220, 1456, 1702, 1762
AjnI CCWGG 5 cut(s) 568, 859, 1372, 1407, 1631
AloI GAACNNNNNNTCC 2 cut(s) 655, 687
AluBI AGCT 9 cut(s) 21, 83, 383, 431, 698, 938, 1522, 1555, 1591
AluI AGCT 9 cut(s) 21, 83, 383, 431, 698, 938, 1522, 1555, 1591
Alw21I GWGCWC 3 cut(s) 1593, 1631, 1836
AlwI GGATC 2 cut(s) 198, 1415
AoxI GGCC 2 cut(s) 1673, 1824
ApoI RAATTY 8 cut(s) 392, 548, 847, 998, 1037, 1364, 1463, 1477
AsiGI ACCGGT 1 cut(s) 482
Asp700I GAANNNNTTC 2 cut(s) 327, 361
AspLEI GCGC 1 cut(s) 1854
AspS9I GGNCC 2 cut(s) 1015, 1825
AsuC2I CCSGG 1 cut(s) 1849
AsuHPI GGTGA 5 cut(s) 146, 188, 215, 776, 1061
AvaII GGWCC 1 cut(s) 1015
BanI GGYRCC 1 cut(s) 1851
BanII GRGCYC 1 cut(s) 1593
BarI GAAGNNNNNNTAC 2 cut(s) 142, 174
BbrPI CACGTG 1 cut(s) 727
BbsI GAAGAC 1 cut(s) 1070
Bbv12I GWGCWC 3 cut(s) 1593, 1631, 1836
BccI CCATC 5 cut(s) 84, 935, 1082, 1388, 1505
BceAI ACGGC 2 cut(s) 578, 991
BciT130I CCWGG 5 cut(s) 570, 861, 1374, 1409, 1633
BciVI GTATCC 1 cut(s) 1800
BcnI CCSGG 1 cut(s) 1849
BfaI CTAG 2 cut(s) 248, 1671
BfmI CTRYAG 2 cut(s) 384, 1567
BfoI RGCGCY 1 cut(s) 1855
BfuI GTATCC 1 cut(s) 1800
Bme1390I CCNGG 6 cut(s) 570, 861, 1374, 1409, 1633, 1849
Bme18I GGWCC 1 cut(s) 1015
BmgT120I GGNCC 2 cut(s) 1015, 1825
BmiI GGNNCC 3 cut(s) 74, 1016, 1853
BmrFI CCNGG 6 cut(s) 570, 861, 1374, 1409, 1633, 1849
BmsI GCATC 7 cut(s) 574, 786, 877, 948, 1011, 1397, 1627
BpiI GAAGAC 1 cut(s) 1070
BpmI CTGGAG 2 cut(s) 639, 714
BpuEI CTTGAG 1 cut(s) 806
BpuMI CCSGG 1 cut(s) 1849
BsaAI YACGTR 1 cut(s) 727
BsaHI GRCGYC 2 cut(s) 1155, 1852
BsaJI CCNNGG 5 cut(s) 555, 860, 1373, 1408, 1632
BsaWI WCCGGW 2 cut(s) 482, 1803
BsaXI ACNNNNNCTCC 4 cut(s) 199, 229, 1309, 1339
Bsc4I CCNNNNNNNGG 5 cut(s) 49, 131, 561, 1414, 1854
Bse118I RCCGGY 2 cut(s) 482, 1854
Bse3DI GCAATG 1 cut(s) 747
BseBI CCWGG 5 cut(s) 570, 861, 1374, 1409, 1633
BseDI CCNNGG 5 cut(s) 555, 860, 1373, 1408, 1632
BseGI GGATG 5 cut(s) 10, 565, 868, 1423, 1642
BseLI CCNNNNNNNGG 5 cut(s) 49, 131, 561, 1414, 1854
BseMI GCAATG 1 cut(s) 747
BseMII CTCAG 2 cut(s) 525, 1050
BseRI GAGGAG 1 cut(s) 1330
BseYI CCCAGC 1 cut(s) 1413
BsgI GTGCAG 1 cut(s) 852
BshFI GGCC 2 cut(s) 1675, 1826
BshNI GGYRCC 1 cut(s) 1851
BshTI ACCGGT 1 cut(s) 482
BsiHKAI GWGCWC 3 cut(s) 1593, 1631, 1836
BsiSI CCGG 5 cut(s) 483, 629, 1804, 1849, 1855
BslFI GGGAC 2 cut(s) 902, 986
BslI CCNNNNNNNGG 5 cut(s) 49, 131, 561, 1414, 1854
BsmFI GGGAC 2 cut(s) 902, 986
BsmI GAATGC 1 cut(s) 327
BsnI GGCC 2 cut(s) 1675, 1826
Bsp1286I GDGCHC 3 cut(s) 1593, 1631, 1836
Bsp1407I TGTACA 1 cut(s) 461
Bsp143I GATC 4 cut(s) 190, 676, 1420, 1771
BspACI CCGC 4 cut(s) 170, 478, 1435, 1666
BspANI GGCC 2 cut(s) 1675, 1826
BspCNI CTCAG 2 cut(s) 526, 1051
BspHI TCATGA 2 cut(s) 489, 616
BspLI GGNNCC 3 cut(s) 74, 1016, 1853
BspPI GGATC 2 cut(s) 198, 1415
BspT107I GGYRCC 1 cut(s) 1851
BsrDI GCAATG 1 cut(s) 747
BsrFI RCCGGY 2 cut(s) 482, 1854
BsrGI TGTACA 1 cut(s) 461
BssAI RCCGGY 2 cut(s) 482, 1854
BssECI CCNNGG 5 cut(s) 555, 860, 1373, 1408, 1632
BssMI GATC 4 cut(s) 190, 676, 1420, 1771
BssNAI GTATAC 1 cut(s) 449
BssNI GRCGYC 2 cut(s) 1155, 1852
BssT1I CCWWGG 1 cut(s) 555
Bst1107I GTATAC 1 cut(s) 449
Bst2UI CCWGG 5 cut(s) 570, 861, 1374, 1409, 1633
Bst4CI ACNGT 3 cut(s) 461, 1206, 1345
Bst6I CTCTTC 2 cut(s) 247, 659
BstACI GRCGYC 2 cut(s) 1155, 1852
BstAUI TGTACA 1 cut(s) 461
BstBAI YACGTR 1 cut(s) 727
BstC8I GCNNGC 1 cut(s) 1664
BstDEI CTNAG 2 cut(s) 534, 1059
BstF5I GGATG 5 cut(s) 10, 565, 868, 1423, 1642
BstH2I RGCGCY 1 cut(s) 1855
BstHHI GCGC 1 cut(s) 1854
BstKTI GATC 4 cut(s) 193, 679, 1423, 1774
BstMBI GATC 4 cut(s) 190, 676, 1420, 1771
BstMWI GCNNNNNNNGC 1 cut(s) 1672
BstNI CCWGG 5 cut(s) 570, 861, 1374, 1409, 1633
BstNSI RCATGY 4 cut(s) 100, 610, 1388, 1666
BstSCI CCNGG 6 cut(s) 568, 859, 1372, 1407, 1631, 1847
BstSFI CTRYAG 2 cut(s) 384, 1567
BstV2I GAAGAC 1 cut(s) 1070
BstZ17I GTATAC 1 cut(s) 449
BsuI GTATCC 1 cut(s) 1800
BsuRI GGCC 2 cut(s) 1675, 1826
BtsCI GGATG 5 cut(s) 10, 565, 868, 1423, 1642
BtsIMutI CAGTG 3 cut(s) 457, 1107, 1315
Cac8I GCNNGC 1 cut(s) 1664
CciI TCATGA 2 cut(s) 489, 616
CfoI GCGC 1 cut(s) 1854
Cfr10I RCCGGY 2 cut(s) 482, 1854
Cfr13I GGNCC 2 cut(s) 1015, 1825
Csp6I GTAC 4 cut(s) 167, 368, 462, 1430
CspAI ACCGGT 1 cut(s) 482
CviQI GTAC 4 cut(s) 167, 368, 462, 1430
DdeI CTNAG 2 cut(s) 534, 1059
DinI GGCGCC 1 cut(s) 1853
DpnI GATC 4 cut(s) 192, 678, 1422, 1773
DpnII GATC 4 cut(s) 190, 676, 1420, 1771
DraI TTTAAA 1 cut(s) 1582
Eam1104I CTCTTC 2 cut(s) 247, 659
EarI CTCTTC 2 cut(s) 247, 659
Ecl136II GAGCTC 1 cut(s) 1591
Eco130I CCWWGG 1 cut(s) 555
Eco24I GRGCYC 1 cut(s) 1593
Eco47I GGWCC 1 cut(s) 1015
Eco53kI GAGCTC 1 cut(s) 1591
Eco57I CTGAAG 1 cut(s) 126
Eco72I CACGTG 1 cut(s) 727
EcoICRI GAGCTC 1 cut(s) 1591
EcoRI GAATTC 1 cut(s) 1477
EcoRII CCWGG 5 cut(s) 568, 859, 1372, 1407, 1631
EcoT14I CCWWGG 1 cut(s) 555
EcoT22I ATGCAT 1 cut(s) 1390
EcoT38I GRGCYC 1 cut(s) 1593
EgeI GGCGCC 1 cut(s) 1853
EheI GGCGCC 1 cut(s) 1853
ErhI CCWWGG 1 cut(s) 555
FalI AAGNNNNNCTT 2 cut(s) 156, 188
FaqI GGGAC 2 cut(s) 902, 986
FauI CCCGC 1 cut(s) 1442
FauNDI CATATG 2 cut(s) 130, 1426
FblI GTMKAC 1 cut(s) 448
FokI GGATG 5 cut(s) 17, 552, 855, 1430, 1649
FriOI GRGCYC 1 cut(s) 1593
FspBI CTAG 2 cut(s) 248, 1671
GlaI GCGC 1 cut(s) 1853
GsaI CCCAGC 1 cut(s) 1417
GsuI CTGGAG 2 cut(s) 639, 714
HaeII RGCGCY 1 cut(s) 1855
HaeIII GGCC 2 cut(s) 1675, 1826
HapII CCGG 5 cut(s) 483, 629, 1804, 1849, 1855
HhaI GCGC 1 cut(s) 1854
Hin1I GRCGYC 2 cut(s) 1155, 1852
Hin6I GCGC 1 cut(s) 1852
HinP1I GCGC 1 cut(s) 1852
HindIII AAGCTT 2 cut(s) 19, 81
HinfI GANTC 7 cut(s) 53, 179, 362, 518, 632, 1066, 1270
HpaII CCGG 5 cut(s) 483, 629, 1804, 1849, 1855
HphI GGTGA 5 cut(s) 146, 188, 215, 776, 1061
Hpy166II GTNNAC 4 cut(s) 449, 457, 464, 767
Hpy188I TCNGA 7 cut(s) 310, 676, 1010, 1393, 1401, 1533, 1776
Hpy8I GTNNAC 4 cut(s) 449, 457, 464, 767
HpyAV CCTTC 9 cut(s) 101, 168, 317, 351, 1005, 1315, 1439, 1708, 1756
HpyCH4III ACNGT 3 cut(s) 461, 1206, 1345
HpyCH4IV ACGT 4 cut(s) 726, 949, 1155, 1252
HpyCH4V TGCA 8 cut(s) 128, 351, 818, 833, 1035, 1388, 1640, 1662
HpyF10VI GCNNNNNNNGC 1 cut(s) 1672
HpyF3I CTNAG 2 cut(s) 534, 1059
HpySE526I ACGT 4 cut(s) 726, 949, 1155, 1252
Hsp92I GRCGYC 2 cut(s) 1155, 1852
HspAI GCGC 1 cut(s) 1852
KasI GGCGCC 1 cut(s) 1851
Kzo9I GATC 4 cut(s) 190, 676, 1420, 1771
LmnI GCTCC 3 cut(s) 695, 1519, 1634
LweI GCATC 7 cut(s) 574, 786, 877, 948, 1011, 1397, 1627
MaeI CTAG 2 cut(s) 248, 1671
MaeII ACGT 4 cut(s) 726, 949, 1155, 1252
MaeIII GTNAC 6 cut(s) 293, 512, 529, 980, 1332, 1345
MalI GATC 4 cut(s) 192, 678, 1422, 1773
MboI GATC 4 cut(s) 190, 676, 1420, 1771
MboII GAAGA 9 cut(s) 23, 149, 264, 676, 1075, 1149, 1561, 1833, 1836
MfeI CAATTG 1 cut(s) 747
MhlI GDGCHC 3 cut(s) 1593, 1631, 1836
Mly113I GGCGCC 1 cut(s) 1852
MlyI GAGTC 3 cut(s) 188, 1060, 1279
Mph1103I ATGCAT 1 cut(s) 1390
MroXI GAANNNNTTC 2 cut(s) 327, 361
MseI TTAA 5 cut(s) 278, 339, 905, 1581, 1821
MslI CAYNNNNRTG 1 cut(s) 198
MspI CCGG 5 cut(s) 483, 629, 1804, 1849, 1855
MspR9I CCNGG 6 cut(s) 570, 861, 1374, 1409, 1633, 1849
MunI CAATTG 1 cut(s) 747
Mva1269I GAATGC 1 cut(s) 327
MvaI CCWGG 5 cut(s) 570, 861, 1374, 1409, 1633
MwoI GCNNNNNNNGC 1 cut(s) 1672
NarI GGCGCC 1 cut(s) 1852
NciI CCSGG 1 cut(s) 1849
NdeI CATATG 2 cut(s) 130, 1426
NdeII GATC 4 cut(s) 190, 676, 1420, 1771
NlaIV GGNNCC 3 cut(s) 74, 1016, 1853
NsiI ATGCAT 1 cut(s) 1390
NspI RCATGY 4 cut(s) 100, 610, 1388, 1666
PaeI GCATGC 1 cut(s) 1666
PagI TCATGA 2 cut(s) 489, 616
PciI ACATGT 1 cut(s) 606
PctI GAATGC 1 cut(s) 327
PdmI GAANNNNTTC 2 cut(s) 327, 361
PfeI GAWTC 4 cut(s) 53, 362, 518, 632
PfoI TCCNGGA 1 cut(s) 568
PinAI ACCGGT 1 cut(s) 482
PleI GAGTC 3 cut(s) 187, 1060, 1278
PluTI GGCGCC 1 cut(s) 1855
PmaCI CACGTG 1 cut(s) 727
PmlI CACGTG 1 cut(s) 727
PpsI GAGTC 3 cut(s) 187, 1060, 1278
Ppu21I YACGTR 1 cut(s) 727
PscI ACATGT 1 cut(s) 606
Psp124BI GAGCTC 1 cut(s) 1593
Psp6I CCWGG 5 cut(s) 568, 859, 1372, 1407, 1631
PspCI CACGTG 1 cut(s) 727
PspFI CCCAGC 1 cut(s) 1413
PspGI CCWGG 5 cut(s) 568, 859, 1372, 1407, 1631
PspN4I GGNNCC 3 cut(s) 74, 1016, 1853
PspPI GGNCC 2 cut(s) 1015, 1825
RsaI GTAC 4 cut(s) 168, 369, 463, 1431
RsaNI GTAC 4 cut(s) 167, 368, 462, 1430
RseI CAYNNNNRTG 1 cut(s) 198
SacI GAGCTC 1 cut(s) 1593
SaqAI TTAA 5 cut(s) 278, 339, 905, 1581, 1821
Sau3AI GATC 4 cut(s) 190, 676, 1420, 1771
Sau96I GGNCC 2 cut(s) 1015, 1825
SchI GAGTC 3 cut(s) 188, 1060, 1279
ScrFI CCNGG 6 cut(s) 570, 861, 1374, 1409, 1633, 1849
SduI GDGCHC 3 cut(s) 1593, 1631, 1836
SfaNI GCATC 7 cut(s) 574, 786, 877, 948, 1011, 1397, 1627
SfcI CTRYAG 2 cut(s) 384, 1567
SfoI GGCGCC 1 cut(s) 1853
SgrAI CRCCGGYG 1 cut(s) 1854
SinI GGWCC 1 cut(s) 1015
SmiMI CAYNNNNRTG 1 cut(s) 198
SmlI CTYRAG 1 cut(s) 821
SmoI CTYRAG 1 cut(s) 821
SphI GCATGC 1 cut(s) 1666
SsiI CCGC 4 cut(s) 170, 478, 1435, 1666
SspDI GGCGCC 1 cut(s) 1851
SspMI CTAG 2 cut(s) 248, 1671
SstI GAGCTC 1 cut(s) 1593
StyD4I CCNGG 6 cut(s) 568, 859, 1372, 1407, 1631, 1847
StyI CCWWGG 1 cut(s) 555
TaaI ACNGT 3 cut(s) 461, 1206, 1345
TaiI ACGT 4 cut(s) 729, 952, 1158, 1255
TaqI TCGA 2 cut(s) 1240, 1593
TatI WGTACW 1 cut(s) 461
TfiI GAWTC 4 cut(s) 53, 362, 518, 632
Tru1I TTAA 5 cut(s) 278, 339, 905, 1581, 1821
Tru9I TTAA 5 cut(s) 278, 339, 905, 1581, 1821
TscAI CASTG 3 cut(s) 464, 1114, 1315
TspGWI ACGGA 4 cut(s) 355, 455, 1760, 1825
TspRI CASTG 3 cut(s) 464, 1114, 1315
VpaK11BI GGWCC 1 cut(s) 1015
XapI RAATTY 8 cut(s) 392, 548, 847, 998, 1037, 1364, 1463, 1477
XceI RCATGY 4 cut(s) 100, 610, 1388, 1666
XcmI CCANNNNNNNNNTGG 1 cut(s) 464
XmiI GTMKAC 1 cut(s) 448
XmnI GAANNNNTTC 2 cut(s) 327, 361
XspI CTAG 2 cut(s) 248, 1671
ZraI GACGTC 1 cut(s) 1156
Zsp2I ATGCAT 1 cut(s) 1390
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.