Rh6BG337100

mRNA-capping enzyme-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0011524
Physical Location & Seq
Forward (+)
57017607 .. 57022789
5183 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG337100.1

Sequence Viewer

Length: 1479 bp
ATGGATAGAGAAGAGAGACGGATGGGGTTAAAAAGAAAATTCCAGTATGAGGATCCAGCGATTCACAATAGGAACCAACAGCCTTATGATCGATACGCGCTTCCAGAAGGTTGGGCTGGTTGTCCTGCTTTCGGAGATGAAATTAGTGGTATAATTCCTTCAAAAGTACCTCTGGGTGAGTCTTTTAGTGACCACATTCGAGGTGAAACATACACTCCAAAGCAAGTCATTCATCAACAAAGACTTCTAGGAAGAGAACTTGGTTTAGTGATTGATCTAACAAACACGACTCGATACTATCCCTTATCCGATTGGGGAAGGGAAGGTATTCGTCATGTTAAGATAAAATGCCAAGGAAGGGATTCAGTACCTGATAGTGAATCTGTAAATAAATTTATCGATGAGGTATCAAAATTTTTCTCCCAGAGAACAAATCCAATGAAGTTTATTCTTGTCCACTGTACACATGGGCATAACCGCACAGGTTTTATGATTGTTCATTACCTTATACATACCAAATCAATTACTGTCACTGAGGCAATAAGTCAATTTTCCAGGGCTCGTCATCCTGGGATATATAAACAGGACTATATTGATGCGCTATACTTGGCTTATCATGAAAGGAAGCCTGATTCAATTGTTTGCCCTCAAACTCCAGAGTGGAAGAGAAGTTCCGATCAGGACAATGAGAATCATGTGAGAAATGGAGCAATGACGATTGATGATGTTTTGGGAGATACAATACCTTTTGACCAGCAAAAGATGTTGCAGGAAGCCTGTTATCATGCACTCGACTTGGTTATAATGGGTAGAGGGAAGTTGCCGTTTCCAGGGTCGCATCCTGTTTCTCTCAACAGAGAGAACCAACAATTACTAAGGCAGCGCTATTACTACGCCACATGGAAAGCTGATGGAACTCGCTATATGATGCTAATTACTTGGGATGGGTGTTACTTAATTGATAGAAGGTTTCATTTCCGAAGGGTCCAGATGCGTTTTCCTTGCAGATTTTCAAATAAGGTTATACCTGAGAAGACTCATCATTTTACATTACTTGATGGAGAGATGATAATTGACACGGACCCAAATACCCAAAAGCAAGAGAGAAGATACCTCATTTATGACGTCATGTCAATTAACCAAGCCTCAGTCGTGAAGCTGCCATTCCATGAACGGTGGAAGATGCTGGAAAAAGAAGTGATCGAGCCTCGAAATATGGAACGTGATACTCTTTCCAGGAGTGCAGAGCCGTATTACAGATATGACTTGGAACCGTTCAGTGTGAGGAGGAAGGGTTTTTGGATACTATCTACTGTTACCAAGCTTTTGAGGAAATTCATTCCTGGACTTTCACATGCATCTGACGGTCTGATATTCCAGGTGATTTTTGAACTCTTCAGAGAGCAGGTTCATAATGTGGATGATAGAATAATTGAAACCAATATTTTGGTCAAACTTGTATCATCTAAAGGTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
DSPc mRNA_cap_C mRNA_cap_enzyme

Protein Analysis

492

Amino Acids

57.91

Weight (kDa)

8.92

Isoelectric Point (pI)

47.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DSPc PF00782 85 - 203 4.1e-15 Dual specificity phosphatase, catalytic domain
mRNA_cap_enzyme PF01331 280 - 461 1.2e-61 mRNA capping enzyme, catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 803
AatII GACGTC 1 cut(s) 1128
Acc36I ACCTGC 1 cut(s) 1396
AccII CGCG 1 cut(s) 98
AciI CCGC 1 cut(s) 478
AclWI GGATC 2 cut(s) 47, 60
AcsI RAATTY 4 cut(s) 38, 392, 413, 1334
AcuI CTGAAG 1 cut(s) 1381
AcyI GRCGYC 1 cut(s) 1125
AfaI GTAC 3 cut(s) 168, 369, 463
AfeI AGCGCT 1 cut(s) 884
AfiI CCNNNNNNNGG 4 cut(s) 49, 131, 358, 830
AgsI TTSAA 5 cut(s) 162, 636, 1014, 1391, 1436
AhdI GACNNNNNGTC 1 cut(s) 1129
AjnI CCWGG 6 cut(s) 554, 568, 829, 1235, 1342, 1377
AloI GAACNNNNNNTCC 2 cut(s) 655, 687
AluBI AGCT 3 cut(s) 908, 1159, 1324
AluI AGCT 3 cut(s) 908, 1159, 1324
Alw26I GTCTC 1 cut(s) 10
AlwI GGATC 2 cut(s) 47, 60
AlwNI CAGNNNCTG 1 cut(s) 371
Aor51HI AGCGCT 1 cut(s) 884
ApeKI GCWGC 2 cut(s) 880, 1159
ApoI RAATTY 4 cut(s) 38, 392, 413, 1334
Asp700I GAANNNNTTC 2 cut(s) 327, 361
AspLEI GCGC 3 cut(s) 100, 601, 885
AspS9I GGNCC 2 cut(s) 985, 1081
AsuHPI GGTGA 3 cut(s) 188, 215, 1393
AvaII GGWCC 2 cut(s) 985, 1081
BamHI GGATCC 1 cut(s) 52
BanII GRGCYC 1 cut(s) 562
BarI GAAGNNNNNNTAC 2 cut(s) 142, 174
BbsI GAAGAC 1 cut(s) 1040
BbvI GCAGC 2 cut(s) 892, 1146
BccI CCATC 4 cut(s) 16, 905, 938, 1052
BceAI ACGGC 2 cut(s) 808, 1234
BciT130I CCWGG 6 cut(s) 556, 570, 831, 1237, 1344, 1379
BciVI GTATCC 1 cut(s) 1296
BcoDI GTCTC 1 cut(s) 10
BfaI CTAG 1 cut(s) 248
BfoI RGCGCY 1 cut(s) 886
BfuAI ACCTGC 1 cut(s) 1396
BfuI GTATCC 1 cut(s) 1296
BisI GCNGC 2 cut(s) 881, 1160
BlsI GCNGC 2 cut(s) 882, 1161
Bme1390I CCNGG 6 cut(s) 556, 570, 831, 1237, 1344, 1379
Bme18I GGWCC 2 cut(s) 985, 1081
BmeRI GACNNNNNGTC 1 cut(s) 1129
BmgT120I GGNCC 2 cut(s) 985, 1081
BmiI GGNNCC 5 cut(s) 54, 74, 986, 1083, 1272
BmrFI CCNGG 6 cut(s) 556, 570, 831, 1237, 1344, 1379
BmsI GCATC 6 cut(s) 586, 847, 918, 981, 1173, 1367
BpiI GAAGAC 1 cut(s) 1040
BpmI CTGGAG 1 cut(s) 639
Bsa29I ATCGAT 2 cut(s) 91, 399
BsaHI GRCGYC 1 cut(s) 1125
BsaJI CCNNGG 4 cut(s) 352, 555, 569, 830
BsaXI ACNNNNNCTCC 4 cut(s) 199, 229, 1279, 1309
Bsc4I CCNNNNNNNGG 4 cut(s) 49, 131, 358, 830
Bse1I ACTGG 1 cut(s) 43
Bse3DI GCAATG 1 cut(s) 717
BseBI CCWGG 6 cut(s) 556, 570, 831, 1237, 1344, 1379
BseCI ATCGAT 2 cut(s) 91, 399
BseDI CCNNGG 4 cut(s) 352, 555, 569, 830
BseGI GGATG 5 cut(s) 27, 565, 838, 949, 1426
BseLI CCNNNNNNNGG 4 cut(s) 49, 131, 358, 830
BseMI GCAATG 1 cut(s) 717
BseMII CTCAG 3 cut(s) 525, 1020, 1161
BseNI ACTGG 1 cut(s) 43
BseRI GAGGAG 1 cut(s) 1300
BseXI GCAGC 2 cut(s) 892, 1146
BsgI GTGCAG 1 cut(s) 1263
Bsh1236I CGCG 1 cut(s) 98
BshVI ATCGAT 2 cut(s) 91, 399
BslI CCNNNNNNNGG 4 cut(s) 49, 131, 358, 830
BsmAI GTCTC 1 cut(s) 10
BsmBI CGTCTC 1 cut(s) 10
Bsp1286I GDGCHC 1 cut(s) 562
Bsp1407I TGTACA 1 cut(s) 461
Bsp143I GATC 5 cut(s) 52, 88, 274, 676, 1200
BspACI CCGC 1 cut(s) 478
BspCNI CTCAG 3 cut(s) 526, 1021, 1160
BspDI ATCGAT 2 cut(s) 91, 399
BspFNI CGCG 1 cut(s) 98
BspHI TCATGA 1 cut(s) 616
BspLI GGNNCC 5 cut(s) 54, 74, 986, 1083, 1272
BspMI ACCTGC 1 cut(s) 1396
BspPI GGATC 2 cut(s) 47, 60
BsrDI GCAATG 1 cut(s) 717
BsrGI TGTACA 1 cut(s) 461
BsrI ACTGG 1 cut(s) 43
BssECI CCNNGG 4 cut(s) 352, 555, 569, 830
BssMI GATC 5 cut(s) 52, 88, 274, 676, 1200
BssNI GRCGYC 1 cut(s) 1125
BssT1I CCWWGG 1 cut(s) 352
Bst2UI CCWGG 6 cut(s) 556, 570, 831, 1237, 1344, 1379
Bst4CI ACNGT 6 cut(s) 461, 529, 1176, 1275, 1315, 1367
Bst6I CTCTTC 4 cut(s) 6, 247, 659, 1400
BstACI GRCGYC 1 cut(s) 1125
BstAUI TGTACA 1 cut(s) 461
BstDEI CTNAG 4 cut(s) 534, 875, 1029, 1147
BstF5I GGATG 5 cut(s) 27, 565, 838, 949, 1426
BstFNI CGCG 1 cut(s) 98
BstH2I RGCGCY 1 cut(s) 886
BstHHI GCGC 3 cut(s) 100, 601, 885
BstKTI GATC 5 cut(s) 55, 91, 277, 679, 1203
BstMAI GTCTC 1 cut(s) 10
BstMBI GATC 5 cut(s) 52, 88, 274, 676, 1200
BstNI CCWGG 6 cut(s) 556, 570, 831, 1237, 1344, 1379
BstNSI RCATGY 1 cut(s) 1358
BstSCI CCNGG 6 cut(s) 554, 568, 829, 1235, 1342, 1377
BstUI CGCG 1 cut(s) 98
BstV1I GCAGC 2 cut(s) 892, 1146
BstV2I GAAGAC 1 cut(s) 1040
BstX2I RGATCY 1 cut(s) 52
BstXI CCANNNNNNTGG 2 cut(s) 111, 1447
BstYI RGATCY 1 cut(s) 52
Bsu15I ATCGAT 2 cut(s) 91, 399
BsuI GTATCC 1 cut(s) 1296
BsuTUI ATCGAT 2 cut(s) 91, 399
BtsCI GGATG 5 cut(s) 27, 565, 838, 949, 1426
BtsIMutI CAGTG 3 cut(s) 457, 531, 1285
BveI ACCTGC 1 cut(s) 1396
CaiI CAGNNNCTG 1 cut(s) 371
CciI TCATGA 1 cut(s) 616
CfoI GCGC 3 cut(s) 100, 601, 885
Cfr13I GGNCC 2 cut(s) 985, 1081
ClaI ATCGAT 2 cut(s) 91, 399
Csp6I GTAC 3 cut(s) 167, 368, 462
CviAII CATG 9 cut(s) 335, 467, 617, 695, 785, 900, 1129, 1169, 1355
CviQI GTAC 3 cut(s) 167, 368, 462
DdeI CTNAG 4 cut(s) 534, 875, 1029, 1147
DpnI GATC 5 cut(s) 54, 90, 276, 678, 1202
DpnII GATC 5 cut(s) 52, 88, 274, 676, 1200
DriI GACNNNNNGTC 1 cut(s) 1129
Eam1104I CTCTTC 4 cut(s) 6, 247, 659, 1400
Eam1105I GACNNNNNGTC 1 cut(s) 1129
EarI CTCTTC 4 cut(s) 6, 247, 659, 1400
Eco130I CCWWGG 1 cut(s) 352
Eco24I GRGCYC 1 cut(s) 562
Eco47I GGWCC 2 cut(s) 985, 1081
Eco47III AGCGCT 1 cut(s) 884
Eco57I CTGAAG 1 cut(s) 1381
EcoRII CCWGG 6 cut(s) 554, 568, 829, 1235, 1342, 1377
EcoT14I CCWWGG 1 cut(s) 352
EcoT22I ATGCAT 1 cut(s) 1360
EcoT38I GRGCYC 1 cut(s) 562
ErhI CCWWGG 1 cut(s) 352
Esp3I CGTCTC 1 cut(s) 10
FaeI CATG 9 cut(s) 338, 470, 620, 698, 788, 903, 1132, 1172, 1358
FatI CATG 9 cut(s) 334, 466, 616, 694, 784, 899, 1128, 1168, 1354
Fnu4HI GCNGC 2 cut(s) 881, 1160
FokI GGATG 5 cut(s) 34, 552, 825, 956, 1433
FriOI GRGCYC 1 cut(s) 562
Fsp4HI GCNGC 2 cut(s) 881, 1160
FspBI CTAG 1 cut(s) 248
GlaI GCGC 3 cut(s) 99, 600, 884
GluI GCNGC 2 cut(s) 881, 1160
GsuI CTGGAG 1 cut(s) 639
HaeII RGCGCY 1 cut(s) 886
HhaI GCGC 3 cut(s) 100, 601, 885
Hin1I GRCGYC 1 cut(s) 1125
Hin1II CATG 9 cut(s) 338, 470, 620, 698, 788, 903, 1132, 1172, 1358
Hin6I GCGC 3 cut(s) 98, 599, 883
HinP1I GCGC 3 cut(s) 98, 599, 883
HindIII AAGCTT 1 cut(s) 1322
HinfI GANTC 8 cut(s) 61, 179, 289, 362, 380, 632, 691, 1036
HphI GGTGA 3 cut(s) 188, 215, 1393
Hpy166II GTNNAC 2 cut(s) 457, 464
Hpy188I TCNGA 7 cut(s) 134, 310, 676, 980, 1363, 1371, 1400
Hpy188III TCNNGA 6 cut(s) 104, 617, 656, 680, 988, 1153
Hpy8I GTNNAC 2 cut(s) 457, 464
HpyAV CCTTC 8 cut(s) 101, 168, 312, 317, 351, 960, 975, 1285
HpyCH4III ACNGT 6 cut(s) 461, 529, 1176, 1275, 1315, 1367
HpyCH4IV ACGT 2 cut(s) 1125, 1222
HpyCH4V TGCA 5 cut(s) 769, 788, 1005, 1244, 1358
HpyF3I CTNAG 4 cut(s) 534, 875, 1029, 1147
HpySE526I ACGT 2 cut(s) 1125, 1222
Hsp92I GRCGYC 1 cut(s) 1125
Hsp92II CATG 9 cut(s) 338, 470, 620, 698, 788, 903, 1132, 1172, 1358
HspAI GCGC 3 cut(s) 98, 599, 883
Kzo9I GATC 5 cut(s) 52, 88, 274, 676, 1200
LmnI GCTCC 1 cut(s) 707
Lsp1109I GCAGC 2 cut(s) 892, 1146
LweI GCATC 6 cut(s) 586, 847, 918, 981, 1173, 1367
MaeI CTAG 1 cut(s) 248
MaeII ACGT 2 cut(s) 1125, 1222
MaeIII GTNAC 5 cut(s) 188, 529, 950, 1315, 1472
MalI GATC 5 cut(s) 54, 90, 276, 678, 1202
MboI GATC 5 cut(s) 52, 88, 274, 676, 1200
MboII GAAGA 7 cut(s) 23, 264, 676, 1045, 1119, 1192, 1387
MfeI CAATTG 1 cut(s) 636
MflI RGATCY 1 cut(s) 52
MhlI GDGCHC 1 cut(s) 562
MlyI GAGTC 3 cut(s) 188, 283, 1030
Mph1103I ATGCAT 1 cut(s) 1360
MroXI GAANNNNTTC 2 cut(s) 327, 361
MseI TTAA 4 cut(s) 29, 339, 956, 1137
MspR9I CCNGG 6 cut(s) 556, 570, 831, 1237, 1344, 1379
MunI CAATTG 1 cut(s) 636
MvaI CCWGG 6 cut(s) 556, 570, 831, 1237, 1344, 1379
MvnI CGCG 1 cut(s) 98
NdeII GATC 5 cut(s) 52, 88, 274, 676, 1200
NlaIII CATG 9 cut(s) 338, 470, 620, 698, 788, 903, 1132, 1172, 1358
NlaIV GGNNCC 5 cut(s) 54, 74, 986, 1083, 1272
NmuCI GTSAC 2 cut(s) 188, 529
NsiI ATGCAT 1 cut(s) 1360
NspI RCATGY 1 cut(s) 1358
PagI TCATGA 1 cut(s) 616
PdmI GAANNNNTTC 2 cut(s) 327, 361
PfeI GAWTC 5 cut(s) 61, 362, 380, 632, 691
PfoI TCCNGGA 2 cut(s) 1235, 1342
PkrI GCNGC 2 cut(s) 882, 1161
PleI GAGTC 3 cut(s) 187, 283, 1030
PpsI GAGTC 3 cut(s) 187, 283, 1030
PsiI TTATAA 1 cut(s) 803
Psp6I CCWGG 6 cut(s) 554, 568, 829, 1235, 1342, 1377
PspGI CCWGG 6 cut(s) 554, 568, 829, 1235, 1342, 1377
PspN4I GGNNCC 5 cut(s) 54, 74, 986, 1083, 1272
PspPI GGNCC 2 cut(s) 985, 1081
PstNI CAGNNNCTG 1 cut(s) 371
PsuI RGATCY 1 cut(s) 52
RsaI GTAC 3 cut(s) 168, 369, 463
RsaNI GTAC 3 cut(s) 167, 368, 462
SaqAI TTAA 4 cut(s) 29, 339, 956, 1137
SatI GCNGC 2 cut(s) 881, 1160
Sau3AI GATC 5 cut(s) 52, 88, 274, 676, 1200
Sau96I GGNCC 2 cut(s) 985, 1081
SchI GAGTC 3 cut(s) 188, 283, 1030
ScrFI CCNGG 6 cut(s) 556, 570, 831, 1237, 1344, 1379
SduI GDGCHC 1 cut(s) 562
SfaNI GCATC 6 cut(s) 586, 847, 918, 981, 1173, 1367
SinI GGWCC 2 cut(s) 985, 1081
SsiI CCGC 1 cut(s) 478
SspI AATATT 1 cut(s) 1444
SspMI CTAG 1 cut(s) 248
StyD4I CCNGG 6 cut(s) 554, 568, 829, 1235, 1342, 1377
StyI CCWWGG 1 cut(s) 352
TaaI ACNGT 6 cut(s) 461, 529, 1176, 1275, 1315, 1367
TaiI ACGT 2 cut(s) 1128, 1225
TaqI TCGA 7 cut(s) 91, 199, 292, 399, 792, 1203, 1210
TatI WGTACW 1 cut(s) 461
TfiI GAWTC 5 cut(s) 61, 362, 380, 632, 691
Tru1I TTAA 4 cut(s) 29, 339, 956, 1137
Tru9I TTAA 4 cut(s) 29, 339, 956, 1137
TscAI CASTG 3 cut(s) 464, 538, 1285
TseFI GTSAC 2 cut(s) 188, 529
TseI GCWGC 2 cut(s) 880, 1159
Tsp45I GTSAC 2 cut(s) 188, 529
TspDTI ATGAA 9 cut(s) 153, 221, 455, 488, 633, 962, 1185, 1327, 1400
TspGWI ACGGA 2 cut(s) 34, 1094
TspRI CASTG 3 cut(s) 464, 538, 1285
VpaK11BI GGWCC 2 cut(s) 985, 1081
XapI RAATTY 4 cut(s) 38, 392, 413, 1334
XceI RCATGY 1 cut(s) 1358
XcmI CCANNNNNNNNNTGG 1 cut(s) 464
XmnI GAANNNNTTC 2 cut(s) 327, 361
XspI CTAG 1 cut(s) 248
ZraI GACGTC 1 cut(s) 1126
Zsp2I ATGCAT 1 cut(s) 1360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.