RH6DG330500

mRNA-capping enzyme-like

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG330500.1

Sequence Viewer

Length: 1809 bp
ATGGGGTTCAAAAGAAAATTCCAGTATGAGGATCCAGCGATTCACAATAGGAACCAACAGCCTTATGATCGATACGCGCTTCCAGAAGGTTGGGCTGGTTGTCCTGCTTTCGGAGATGAAATTAGTGGTATAATTCCTTCAAAAGTACCTCTGGGTGAGTCTTTTAGTGACCACATTCGAGGTGAAACATACACTCCAAAGCAAGTCATTCATCAACAAAGACTTCTAGGAAGAGAACTTGGTTTAGTGATTGATCTAACAAACACGACTCGATACTATCCCTTATCCGATTGGGGAAGGGAAGGTATTCGTCATGTTAAGATAAAATGCCAAGGAAGGGATTCAGTACCTGATAGTGAATCTGTAAATAAATTTATCGATGAGGTATCAAAATTTTTCTCCCAGAGAACAAATCCAATGAAGTTTATTCTTGTCCACTGTACACATGGGCATAACCGCACAGGTTTCATGATTGTTCATTACCTTATACATACCAAATCAATTACTGTCACTGAGGCAATAAGTCAATTTGCCAGGGCTCGTCATCCTGGGATATATAAACAGGACTATATTGATGCGCTATACTTGGCTTATCATGAAAGGAAGCCTGATTCAATTGTTTGCCCTCAAACTCCAGAGTGGAAGAGAAGTTCCGATCAGGACAATGAGAATCATGTGAGAAATGGAGCAATGACGATTGATGATGTTTTGGGAGATACAATACCTATTGACCAGCAAAAGATGTTGCAGGAAGCCTGTTATCATGCACTCGACTTGGTTATAACGGGTAGAGGGAAGTTGCCGTTTCCAGGGTCGCATCCTGTTTCTCTCAACAGAGAGAACCAACAATTACTAAGGCAGCGCTATTACTACGCCACATGGAAAGCTGATGGAACTCGCTATATGATGCTAATTACTTGGGATGGGTGTTACTTAATTGATAGAAGGTTTCATTTCCGAAGGGTCCAGATGCGTTTTCCTTGCAGATTTTCAAATAAGGTTATACCTGAGAAGACTCATCATTTTACATTACTTGATGGAGAGATGATAATTGACACGGACCCAAATACCCAAAAGCAAGAGAGAAGATACCTCATTTATGACGTCATGTCAATTAACCAAGCCTCAGTCGTGAAGCTGCCATTCCATGAACGGTGGAAGATGCTGGAAAAAGAAGTGATCGAGCCTCGAAATATGGAACGTGATACTCTTTCCAGGAGTGCAGAGCCGTATTACAGATATGACTTGGAACCGTTCAGTGTGAGGAGGAAGGGTTTTTGGATACTATCTACTGTTACCAAGCTTTTGAGGAAATTCATTCCTGGACTTTCACATGCATCTGACGGTCTGATATTCCAGGGCTGGGATGATCCTTATGTACCCAGAACGCATGAAGGTCTTTTGAAGTGGAAATTTCCTGAAATGAATTCAGTTGATTTCCTGTTTGAGTTGGGAGTTGATGGTCGTCCGCTACTTTTTCTGAATGAGCGTGGAAAGAAGAAGCTGATGTCAGGCTTTAGGGTTGTTTTTAAAGATGAATTGGACCCAGCTTTTTGTTCGGGGAAAATTGTGGAGTGCGCCTGGGATGCAGAGGGACACGTGTGGGTCTGTTTGCGGCTAAGGCCAGACAAATCGACGCCAAATGAGTTCATGACATATACAAAGGTGATGAAAAGCATCAAGGATAATATAACGGAGGAAGTTGTGTTGAAGGAGATTGATGAGATTGTCCGCCTACCTATGTATGCTGATCGAATAAAGACTGATATTAAGGCACACGAGCATACTTCTTCCGCCCGGCGTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

602

Amino Acids

70.52

Weight (kDa)

8.83

Isoelectric Point (pI)

42.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DSPc PF00782 78 - 196 6.4e-15 Dual specificity phosphatase, catalytic domain
mRNA_cap_enzyme PF01331 273 - 471 2.2e-70 mRNA capping enzyme, catalytic domain
mRNA_cap_C PF03919 518 - 569 6.7e-16 mRNA capping enzyme, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 782
AatII GACGTC 1 cut(s) 1107
AccII CGCG 1 cut(s) 77
AciI CCGC 5 cut(s) 457, 1469, 1615, 1732, 1794
AclWI GGATC 3 cut(s) 26, 39, 1364
AcsI RAATTY 6 cut(s) 17, 371, 392, 1313, 1412, 1426
AcvI CACGTG 1 cut(s) 1600
AcyI GRCGYC 2 cut(s) 1104, 1637
AfaI GTAC 4 cut(s) 147, 348, 442, 1380
AfeI AGCGCT 1 cut(s) 863
AfiI CCNNNNNNNGG 6 cut(s) 28, 110, 337, 809, 1363, 1803
AflIII ACRYGT 2 cut(s) 1597, 1599
AgsI TTSAA 6 cut(s) 10, 141, 615, 993, 1405, 1711
AhdI GACNNNNNGTC 1 cut(s) 1108
AjnI CCWGG 7 cut(s) 533, 547, 808, 1214, 1321, 1356, 1580
AloI GAACNNNNNNTCC 2 cut(s) 634, 666
AluBI AGCT 5 cut(s) 887, 1138, 1303, 1504, 1550
AluI AGCT 5 cut(s) 887, 1138, 1303, 1504, 1550
AlwI GGATC 3 cut(s) 26, 39, 1364
AlwNI CAGNNNCTG 1 cut(s) 350
Aor51HI AGCGCT 1 cut(s) 863
AoxI GGCC 1 cut(s) 1622
ApeKI GCWGC 2 cut(s) 859, 1138
ApoI RAATTY 6 cut(s) 17, 371, 392, 1313, 1412, 1426
Asp700I GAANNNNTTC 2 cut(s) 306, 340
AspLEI GCGC 4 cut(s) 79, 580, 864, 1580
AspS9I GGNCC 3 cut(s) 964, 1060, 1543
AsuC2I CCSGG 1 cut(s) 1798
AsuHPI GGTGA 3 cut(s) 167, 194, 1678
AvaII GGWCC 3 cut(s) 964, 1060, 1543
BamHI GGATCC 1 cut(s) 31
BanII GRGCYC 1 cut(s) 541
BarI GAAGNNNNNNTAC 2 cut(s) 121, 153
BauI CACGAG 1 cut(s) 1778
BbrPI CACGTG 1 cut(s) 1600
BbsI GAAGAC 1 cut(s) 1019
BbvI GCAGC 2 cut(s) 871, 1125
BccI CCATC 4 cut(s) 884, 917, 1031, 1454
BceAI ACGGC 2 cut(s) 787, 1213
BciT130I CCWGG 7 cut(s) 535, 549, 810, 1216, 1323, 1358, 1582
BciVI GTATCC 1 cut(s) 1275
BcnI CCSGG 1 cut(s) 1798
BfaI CTAG 1 cut(s) 227
BfoI RGCGCY 1 cut(s) 865
BfuI GTATCC 1 cut(s) 1275
BisI GCNGC 3 cut(s) 860, 1139, 1616
BlsI GCNGC 3 cut(s) 861, 1140, 1617
Bme1390I CCNGG 8 cut(s) 535, 549, 810, 1216, 1323, 1358, 1582, 1798
Bme18I GGWCC 3 cut(s) 964, 1060, 1543
BmeRI GACNNNNNGTC 1 cut(s) 1108
BmgT120I GGNCC 3 cut(s) 964, 1060, 1543
BmiI GGNNCC 6 cut(s) 33, 53, 965, 1062, 1251, 1545
BmrFI CCNGG 8 cut(s) 535, 549, 810, 1216, 1323, 1358, 1582, 1798
BmsI GCATC 8 cut(s) 565, 826, 897, 960, 1152, 1346, 1576, 1686
BpiI GAAGAC 1 cut(s) 1019
BpmI CTGGAG 1 cut(s) 618
Bpu10I CCTNAGC 1 cut(s) 1619
BpuMI CCSGG 1 cut(s) 1798
Bsa29I ATCGAT 2 cut(s) 70, 378
BsaAI YACGTR 1 cut(s) 1600
BsaHI GRCGYC 2 cut(s) 1104, 1637
BsaJI CCNNGG 6 cut(s) 331, 534, 548, 809, 1357, 1581
BsaXI ACNNNNNCTCC 4 cut(s) 178, 208, 1258, 1288
Bsc4I CCNNNNNNNGG 6 cut(s) 28, 110, 337, 809, 1363, 1803
Bse1I ACTGG 1 cut(s) 22
Bse3DI GCAATG 1 cut(s) 696
BseBI CCWGG 7 cut(s) 535, 549, 810, 1216, 1323, 1358, 1582
BseCI ATCGAT 2 cut(s) 70, 378
BseDI CCNNGG 6 cut(s) 331, 534, 548, 809, 1357, 1581
BseGI GGATG 5 cut(s) 544, 817, 928, 1372, 1591
BseLI CCNNNNNNNGG 6 cut(s) 28, 110, 337, 809, 1363, 1803
BseMI GCAATG 1 cut(s) 696
BseMII CTCAG 3 cut(s) 504, 999, 1140
BseNI ACTGG 1 cut(s) 22
BseRI GAGGAG 1 cut(s) 1279
BseXI GCAGC 2 cut(s) 871, 1125
BseYI CCCAGC 2 cut(s) 1362, 1546
BsgI GTGCAG 1 cut(s) 1242
Bsh1236I CGCG 1 cut(s) 77
BshFI GGCC 1 cut(s) 1624
BshVI ATCGAT 2 cut(s) 70, 378
BsiSI CCGG 1 cut(s) 1798
BslFI GGGAC 1 cut(s) 1608
BslI CCNNNNNNNGG 6 cut(s) 28, 110, 337, 809, 1363, 1803
BsmFI GGGAC 1 cut(s) 1608
BsnI GGCC 1 cut(s) 1624
Bsp1286I GDGCHC 1 cut(s) 541
Bsp1407I TGTACA 1 cut(s) 440
Bsp143I GATC 7 cut(s) 31, 67, 253, 655, 1179, 1369, 1750
BspACI CCGC 5 cut(s) 457, 1469, 1615, 1732, 1794
BspANI GGCC 1 cut(s) 1624
BspCNI CTCAG 3 cut(s) 505, 1000, 1139
BspDI ATCGAT 2 cut(s) 70, 378
BspFNI CGCG 1 cut(s) 77
BspHI TCATGA 3 cut(s) 468, 595, 1650
BspLI GGNNCC 6 cut(s) 33, 53, 965, 1062, 1251, 1545
BspPI GGATC 3 cut(s) 26, 39, 1364
BsrDI GCAATG 1 cut(s) 696
BsrGI TGTACA 1 cut(s) 440
BsrI ACTGG 1 cut(s) 22
BssECI CCNNGG 6 cut(s) 331, 534, 548, 809, 1357, 1581
BssMI GATC 7 cut(s) 31, 67, 253, 655, 1179, 1369, 1750
BssNI GRCGYC 2 cut(s) 1104, 1637
BssSI CACGAG 1 cut(s) 1778
BssT1I CCWWGG 1 cut(s) 331
Bst2BI CACGAG 1 cut(s) 1778
Bst2UI CCWGG 7 cut(s) 535, 549, 810, 1216, 1323, 1358, 1582
Bst4CI ACNGT 6 cut(s) 440, 508, 1155, 1254, 1294, 1346
Bst6I CTCTTC 2 cut(s) 226, 638
BstACI GRCGYC 2 cut(s) 1104, 1637
BstAUI TGTACA 1 cut(s) 440
BstBAI YACGTR 1 cut(s) 1600
BstDEI CTNAG 5 cut(s) 513, 854, 1008, 1126, 1619
BstF5I GGATG 5 cut(s) 544, 817, 928, 1372, 1591
BstFNI CGCG 1 cut(s) 77
BstH2I RGCGCY 1 cut(s) 865
BstHHI GCGC 4 cut(s) 79, 580, 864, 1580
BstKTI GATC 7 cut(s) 34, 70, 256, 658, 1182, 1372, 1753
BstMBI GATC 7 cut(s) 31, 67, 253, 655, 1179, 1369, 1750
BstMWI GCNNNNNNNGC 2 cut(s) 1586, 1621
BstNI CCWGG 7 cut(s) 535, 549, 810, 1216, 1323, 1358, 1582
BstNSI RCATGY 1 cut(s) 1337
BstSCI CCNGG 8 cut(s) 533, 547, 808, 1214, 1321, 1356, 1580, 1796
BstUI CGCG 1 cut(s) 77
BstV1I GCAGC 2 cut(s) 871, 1125
BstV2I GAAGAC 1 cut(s) 1019
BstX2I RGATCY 1 cut(s) 31
BstXI CCANNNNNNTGG 1 cut(s) 90
BstYI RGATCY 1 cut(s) 31
Bsu15I ATCGAT 2 cut(s) 70, 378
BsuI GTATCC 1 cut(s) 1275
BsuRI GGCC 1 cut(s) 1624
BsuTUI ATCGAT 2 cut(s) 70, 378
BtsCI GGATG 5 cut(s) 544, 817, 928, 1372, 1591
BtsIMutI CAGTG 3 cut(s) 436, 510, 1264
CaiI CAGNNNCTG 1 cut(s) 350
CciI TCATGA 3 cut(s) 468, 595, 1650
CfoI GCGC 4 cut(s) 79, 580, 864, 1580
Cfr13I GGNCC 3 cut(s) 964, 1060, 1543
ClaI ATCGAT 2 cut(s) 70, 378
CseI GACGC 1 cut(s) 1645
Csp6I GTAC 4 cut(s) 146, 347, 441, 1379
CviQI GTAC 4 cut(s) 146, 347, 441, 1379
DdeI CTNAG 5 cut(s) 513, 854, 1008, 1126, 1619
DpnI GATC 7 cut(s) 33, 69, 255, 657, 1181, 1371, 1752
DpnII GATC 7 cut(s) 31, 67, 253, 655, 1179, 1369, 1750
DraI TTTAAA 1 cut(s) 1531
DriI GACNNNNNGTC 1 cut(s) 1108
Eam1104I CTCTTC 2 cut(s) 226, 638
Eam1105I GACNNNNNGTC 1 cut(s) 1108
EarI CTCTTC 2 cut(s) 226, 638
EciI GGCGGA 2 cut(s) 1721, 1783
Eco130I CCWWGG 1 cut(s) 331
Eco24I GRGCYC 1 cut(s) 541
Eco47I GGWCC 3 cut(s) 964, 1060, 1543
Eco47III AGCGCT 1 cut(s) 863
Eco72I CACGTG 1 cut(s) 1600
EcoRI GAATTC 1 cut(s) 1426
EcoRII CCWGG 7 cut(s) 533, 547, 808, 1214, 1321, 1356, 1580
EcoT14I CCWWGG 1 cut(s) 331
EcoT22I ATGCAT 1 cut(s) 1339
EcoT38I GRGCYC 1 cut(s) 541
ErhI CCWWGG 1 cut(s) 331
FaqI GGGAC 1 cut(s) 1608
Fnu4HI GCNGC 3 cut(s) 860, 1139, 1616
FokI GGATG 5 cut(s) 531, 804, 935, 1379, 1598
FriOI GRGCYC 1 cut(s) 541
Fsp4HI GCNGC 3 cut(s) 860, 1139, 1616
FspBI CTAG 1 cut(s) 227
GlaI GCGC 4 cut(s) 78, 579, 863, 1579
GluI GCNGC 3 cut(s) 860, 1139, 1616
GsaI CCCAGC 2 cut(s) 1366, 1550
GsuI CTGGAG 1 cut(s) 618
HaeII RGCGCY 1 cut(s) 865
HaeIII GGCC 1 cut(s) 1624
HapII CCGG 1 cut(s) 1798
HgaI GACGC 1 cut(s) 1645
HhaI GCGC 4 cut(s) 79, 580, 864, 1580
Hin1I GRCGYC 2 cut(s) 1104, 1637
Hin6I GCGC 4 cut(s) 77, 578, 862, 1578
HinP1I GCGC 4 cut(s) 77, 578, 862, 1578
HindIII AAGCTT 1 cut(s) 1301
HinfI GANTC 8 cut(s) 40, 158, 268, 341, 359, 611, 670, 1015
HpaII CCGG 1 cut(s) 1798
HphI GGTGA 3 cut(s) 167, 194, 1678
Hpy166II GTNNAC 2 cut(s) 436, 443
Hpy188I TCNGA 7 cut(s) 113, 289, 655, 959, 1342, 1350, 1482
Hpy188III TCNNGA 9 cut(s) 83, 469, 596, 635, 659, 967, 1132, 1418, 1651
Hpy8I GTNNAC 2 cut(s) 436, 443
Hpy99I CGWCG 1 cut(s) 1639
HpyCH4III ACNGT 6 cut(s) 440, 508, 1155, 1254, 1294, 1346
HpyCH4IV ACGT 3 cut(s) 1104, 1201, 1599
HpyCH4V TGCA 6 cut(s) 748, 767, 984, 1223, 1337, 1589
HpyF10VI GCNNNNNNNGC 2 cut(s) 1586, 1621
HpyF3I CTNAG 5 cut(s) 513, 854, 1008, 1126, 1619
HpySE526I ACGT 3 cut(s) 1104, 1201, 1599
Hsp92I GRCGYC 2 cut(s) 1104, 1637
HspAI GCGC 4 cut(s) 77, 578, 862, 1578
Kzo9I GATC 7 cut(s) 31, 67, 253, 655, 1179, 1369, 1750
LmnI GCTCC 1 cut(s) 686
Lsp1109I GCAGC 2 cut(s) 871, 1125
LweI GCATC 8 cut(s) 565, 826, 897, 960, 1152, 1346, 1576, 1686
MaeI CTAG 1 cut(s) 227
MaeII ACGT 3 cut(s) 1104, 1201, 1599
MaeIII GTNAC 4 cut(s) 167, 508, 929, 1294
MalI GATC 7 cut(s) 33, 69, 255, 657, 1181, 1371, 1752
MboI GATC 7 cut(s) 31, 67, 253, 655, 1179, 1369, 1750
MboII GAAGA 7 cut(s) 243, 655, 1024, 1098, 1171, 1510, 1782
MfeI CAATTG 1 cut(s) 615
MflI RGATCY 1 cut(s) 31
MhlI GDGCHC 1 cut(s) 541
MlyI GAGTC 3 cut(s) 167, 262, 1009
Mph1103I ATGCAT 1 cut(s) 1339
MroXI GAANNNNTTC 2 cut(s) 306, 340
MseI TTAA 5 cut(s) 318, 935, 1116, 1530, 1770
MspI CCGG 1 cut(s) 1798
MspR9I CCNGG 8 cut(s) 535, 549, 810, 1216, 1323, 1358, 1582, 1798
MunI CAATTG 1 cut(s) 615
MvaI CCWGG 7 cut(s) 535, 549, 810, 1216, 1323, 1358, 1582
MvnI CGCG 1 cut(s) 77
MwoI GCNNNNNNNGC 2 cut(s) 1586, 1621
NciI CCSGG 1 cut(s) 1798
NdeII GATC 7 cut(s) 31, 67, 253, 655, 1179, 1369, 1750
NlaIV GGNNCC 6 cut(s) 33, 53, 965, 1062, 1251, 1545
NmuCI GTSAC 2 cut(s) 167, 508
NsiI ATGCAT 1 cut(s) 1339
NspI RCATGY 1 cut(s) 1337
PagI TCATGA 3 cut(s) 468, 595, 1650
PdmI GAANNNNTTC 2 cut(s) 306, 340
PfeI GAWTC 5 cut(s) 40, 341, 359, 611, 670
PfoI TCCNGGA 2 cut(s) 1214, 1321
PkrI GCNGC 3 cut(s) 861, 1140, 1617
PleI GAGTC 3 cut(s) 166, 262, 1009
PmaCI CACGTG 1 cut(s) 1600
PmlI CACGTG 1 cut(s) 1600
PpsI GAGTC 3 cut(s) 166, 262, 1009
Ppu21I YACGTR 1 cut(s) 1600
PsiI TTATAA 1 cut(s) 782
Psp6I CCWGG 7 cut(s) 533, 547, 808, 1214, 1321, 1356, 1580
PspCI CACGTG 1 cut(s) 1600
PspFI CCCAGC 2 cut(s) 1362, 1546
PspGI CCWGG 7 cut(s) 533, 547, 808, 1214, 1321, 1356, 1580
PspN4I GGNNCC 6 cut(s) 33, 53, 965, 1062, 1251, 1545
PspPI GGNCC 3 cut(s) 964, 1060, 1543
PstNI CAGNNNCTG 1 cut(s) 350
PsuI RGATCY 1 cut(s) 31
RsaI GTAC 4 cut(s) 147, 348, 442, 1380
RsaNI GTAC 4 cut(s) 146, 347, 441, 1379
SaqAI TTAA 5 cut(s) 318, 935, 1116, 1530, 1770
SatI GCNGC 3 cut(s) 860, 1139, 1616
Sau3AI GATC 7 cut(s) 31, 67, 253, 655, 1179, 1369, 1750
Sau96I GGNCC 3 cut(s) 964, 1060, 1543
SchI GAGTC 3 cut(s) 167, 262, 1009
ScrFI CCNGG 8 cut(s) 535, 549, 810, 1216, 1323, 1358, 1582, 1798
SduI GDGCHC 1 cut(s) 541
SfaNI GCATC 8 cut(s) 565, 826, 897, 960, 1152, 1346, 1576, 1686
SinI GGWCC 3 cut(s) 964, 1060, 1543
SsiI CCGC 5 cut(s) 457, 1469, 1615, 1732, 1794
SspMI CTAG 1 cut(s) 227
StyD4I CCNGG 8 cut(s) 533, 547, 808, 1214, 1321, 1356, 1580, 1796
StyI CCWWGG 1 cut(s) 331
TaaI ACNGT 6 cut(s) 440, 508, 1155, 1254, 1294, 1346
TaiI ACGT 3 cut(s) 1107, 1204, 1602
TaqI TCGA 9 cut(s) 70, 178, 271, 378, 771, 1182, 1189, 1634, 1753
TatI WGTACW 1 cut(s) 440
TauI GCSGC 1 cut(s) 1618
TfiI GAWTC 5 cut(s) 40, 341, 359, 611, 670
Tru1I TTAA 5 cut(s) 318, 935, 1116, 1530, 1770
Tru9I TTAA 5 cut(s) 318, 935, 1116, 1530, 1770
TscAI CASTG 3 cut(s) 443, 517, 1264
TseFI GTSAC 2 cut(s) 167, 508
TseI GCWGC 2 cut(s) 859, 1138
Tsp45I GTSAC 2 cut(s) 167, 508
TspGWI ACGGA 2 cut(s) 1073, 1709
TspRI CASTG 3 cut(s) 443, 517, 1264
VpaK11BI GGWCC 3 cut(s) 964, 1060, 1543
XapI RAATTY 6 cut(s) 17, 371, 392, 1313, 1412, 1426
XceI RCATGY 1 cut(s) 1337
XcmI CCANNNNNNNNNTGG 1 cut(s) 443
XmnI GAANNNNTTC 2 cut(s) 306, 340
XspI CTAG 1 cut(s) 227
ZraI GACGTC 1 cut(s) 1105
Zsp2I ATGCAT 1 cut(s) 1339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.