Prupe.8G251000_v2.0.a1

NPL4-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
21597499 .. 21601054
3556 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G251000.1

Sequence Viewer

Length: 1239 bp
ATGATGCTCAGAGTTCGCAGCAGAGACGGTCTGGAACGAGTCACTGTAGATAACCCACAACACACCACTGTCTCCCAACTCAAAGCCCTAATCCAAACTCAGCTCCGAATCCCTTTCCAGAACCAGACCATCTCCACCAACCAAAACCTCCTCTTGGCCAAGACCCATGACGACATCTCCCGATTCACCGACATGGCAAATCCCAACACTCCTCTCTCGGCCCTCAATCTCTCCCATGGCTCCATCGTCTACCTCGCCTACGACGGCGAGCGCACCGTCGCCGGCCCCACCTTCCACCCGGCAGGCTCTTTCGGTCGCAAGATGACCATGGACGACCTCATCGCCAAGCAGATGAAAGTCACCCGCCAAGAAAACCCGCACAGCGAGCTCGTCTCCTTTGATCGCGATTGCGCCAATGCCTTCCAGCATTACGTCAACGACACGCTCGCTTTCGCGGTGAAGCGCGGTGGATTCATGTACGGTACGGTGTCGGAGGAGGGAAAGGTGGAGGTGGATTTCATATACGAGCCTCCCCAACAGGGGACTGAGGCGAATTTGGTGTTTTTCAGAGACCCAGATGAGGAAAAGTCGGTGGAGGCTATTGCAATGGGGTTGGGAATGAGACGGGTCGGTTTTATATTCACCCAGACGGTGAGCCAGGACAAAAAAGACTATACTTTGTCGAATAGGGAGGTTCTTCAGGCCTCGGAGTTTCACGCGGAGAGTGGCTTGAAGGAGTGGGTGACTGCCATGGTTAAATTGGAGGTGAATGAGGATGGCGGTGCTGATGTGCATTTTGAGGCTTTTCAGATGAGTGATATGTGTATTAGATTGTTTAAAGAAGGGTGGTTCGAGACTGAGATTGAAGAGGGTCATGATCCAAAGTTGTCCAAGATGAAGAAGGATGTTGTTGTTGGGGTGAAGGATACTAGGGAAGTGGACAATGATTTTTTCTTGGTGGTGGTAAAGATCTTCGATCACCAGGGCCCACTTTCATCATCTTTTCCTATTGAGAACCGTAACACCCCAGTGACGTTGAAGGCTCTGAAAAATCATCTGGATCGTGCTAAGAGTCTTCCATTTGTGAAGCGAATTTCAGATTTTCATTTGATGCTCTTGCTGGCCAGGTTTTTAGACGTTGCTGCAGATATTCCTGCTTTGGCAGTGTGTGTCCATACAGAGTCACCCATACCAGAAGGCTACCAGTTATTAATCGAGTCAATGGCCAATGCTTCTTGA

Protein Analysis

413

Amino Acids

46.38

Weight (kDa)

5.43

Isoelectric Point (pI)

32.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013136)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 249
AccII CGCG 4 cut(s) 405, 455, 465, 719
AciI CCGC 6 cut(s) 364, 377, 455, 465, 719, 780
AclWI GGATC 2 cut(s) 872, 1068
AcoI YGGCCR 3 cut(s) 156, 1122, 1224
AcsI RAATTY 2 cut(s) 553, 1092
AcuI CTGAAG 1 cut(s) 683
AfaI GTAC 2 cut(s) 479, 484
AfiI CCNNNNNNNGG 4 cut(s) 154, 539, 540, 580
AgsI TTSAA 3 cut(s) 733, 866, 1039
AjnI CCWGG 3 cut(s) 657, 981, 1124
AleI CACNNNNGTG 1 cut(s) 1028
AluBI AGCT 2 cut(s) 103, 388
AluI AGCT 2 cut(s) 103, 388
Alw21I GWGCWC 1 cut(s) 390
Alw26I GTCTC 6 cut(s) 18, 76, 397, 564, 616, 848
AlwI GGATC 2 cut(s) 872, 1068
AoxI GGCC 7 cut(s) 156, 219, 283, 702, 985, 1122, 1224
ApaI GGGCCC 1 cut(s) 989
ApeKI GCWGC 2 cut(s) 18, 1142
ApoI RAATTY 2 cut(s) 553, 1092
AseI ATTAAT 1 cut(s) 1211
AspLEI GCGC 3 cut(s) 273, 413, 465
AspS9I GGNCC 4 cut(s) 220, 284, 985, 986
AsuC2I CCSGG 1 cut(s) 299
BaeGI GKGCMC 1 cut(s) 989
BalI TGGCCA 3 cut(s) 158, 1124, 1226
BanII GRGCYC 2 cut(s) 390, 989
BbsI GAAGAC 1 cut(s) 1067
Bbv12I GWGCWC 1 cut(s) 390
BbvI GCAGC 2 cut(s) 30, 1129
BccI CCATC 3 cut(s) 137, 251, 770
BceAI ACGGC 1 cut(s) 280
BciT130I CCWGG 3 cut(s) 659, 983, 1126
BciVI GTATCC 1 cut(s) 919
BcnI CCSGG 1 cut(s) 299
BcoDI GTCTC 6 cut(s) 18, 76, 397, 564, 616, 848
BfaI CTAG 1 cut(s) 930
BfmI CTRYAG 2 cut(s) 45, 1143
BfuI GTATCC 1 cut(s) 919
BglII AGATCT 1 cut(s) 969
BisI GCNGC 2 cut(s) 19, 1143
BlsI GCNGC 2 cut(s) 20, 1144
Bme1390I CCNGG 4 cut(s) 299, 659, 983, 1126
BmgT120I GGNCC 4 cut(s) 220, 284, 985, 986
BmiI GGNNCC 3 cut(s) 241, 286, 987
BmrFI CCNGG 4 cut(s) 299, 659, 983, 1126
BmrI ACTGGG 1 cut(s) 1022
BmsI GCATC 1 cut(s) 1101
BmuI ACTGGG 1 cut(s) 1022
BpiI GAAGAC 1 cut(s) 1067
BplI GAGNNNNNCTC 2 cut(s) 377, 409
BpuMI CCSGG 1 cut(s) 299
BsaI GGTCTC 1 cut(s) 564
BsaJI CCNNGG 5 cut(s) 235, 327, 705, 750, 982
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 4 cut(s) 154, 539, 540, 580
Bse118I RCCGGY 1 cut(s) 281
Bse1I ACTGG 2 cut(s) 1028, 1204
Bse3DI GCAATG 1 cut(s) 612
BseBI CCWGG 3 cut(s) 659, 983, 1126
BseDI CCNNGG 5 cut(s) 235, 327, 705, 750, 982
BseGI GGATG 2 cut(s) 781, 910
BseLI CCNNNNNNNGG 4 cut(s) 154, 539, 540, 580
BseMI GCAATG 1 cut(s) 612
BseMII CTCAG 4 cut(s) 22, 113, 537, 849
BseNI ACTGG 2 cut(s) 1028, 1204
BseRI GAGGAG 3 cut(s) 140, 201, 509
BseSI GKGCMC 1 cut(s) 989
BseXI GCAGC 2 cut(s) 30, 1129
Bsh1236I CGCG 4 cut(s) 405, 455, 465, 719
Bsh1285I CGRYCG 1 cut(s) 316
BshFI GGCC 7 cut(s) 158, 221, 285, 704, 987, 1124, 1226
BsiEI CGRYCG 1 cut(s) 316
BsiHKAI GWGCWC 1 cut(s) 390
BsiSI CCGG 2 cut(s) 282, 299
BslFI GGGAC 1 cut(s) 556
BslI CCNNNNNNNGG 4 cut(s) 154, 539, 540, 580
BsmAI GTCTC 6 cut(s) 18, 76, 397, 564, 616, 848
BsmBI CGTCTC 3 cut(s) 18, 397, 616
BsmFI GGGAC 1 cut(s) 556
BsnI GGCC 7 cut(s) 158, 221, 285, 704, 987, 1124, 1226
Bso31I GGTCTC 1 cut(s) 564
Bsp120I GGGCCC 1 cut(s) 985
Bsp1286I GDGCHC 2 cut(s) 390, 989
Bsp143I GATC 5 cut(s) 400, 877, 969, 976, 1060
Bsp19I CCATGG 3 cut(s) 235, 327, 750
Bsp68I TCGCGA 1 cut(s) 405
BspACI CCGC 6 cut(s) 364, 377, 455, 465, 719, 780
BspANI GGCC 7 cut(s) 158, 221, 285, 704, 987, 1124, 1226
BspCNI CTCAG 4 cut(s) 21, 112, 538, 850
BspFNI CGCG 4 cut(s) 405, 455, 465, 719
BspHI TCATGA 1 cut(s) 874
BspLI GGNNCC 3 cut(s) 241, 286, 987
BspMAI CTGCAG 1 cut(s) 1147
BspPI GGATC 2 cut(s) 872, 1068
BspTNI GGTCTC 1 cut(s) 564
BsrDI GCAATG 1 cut(s) 612
BsrFI RCCGGY 1 cut(s) 281
BsrI ACTGG 2 cut(s) 1028, 1204
BssAI RCCGGY 1 cut(s) 281
BssECI CCNNGG 5 cut(s) 235, 327, 705, 750, 982
BssMI GATC 5 cut(s) 400, 877, 969, 976, 1060
BssT1I CCWWGG 3 cut(s) 235, 327, 750
Bst2UI CCWGG 3 cut(s) 659, 983, 1126
Bst4CI ACNGT 8 cut(s) 29, 46, 70, 277, 482, 487, 652, 1019
Bst6I CTCTTC 1 cut(s) 861
BstC8I GCNNGC 6 cut(s) 269, 283, 304, 386, 447, 1122
BstDEI CTNAG 5 cut(s) 8, 99, 546, 858, 1068
BstDSI CCRYGG 3 cut(s) 235, 327, 750
BstF5I GGATG 2 cut(s) 781, 910
BstFNI CGCG 4 cut(s) 405, 455, 465, 719
BstHHI GCGC 3 cut(s) 273, 413, 465
BstKTI GATC 5 cut(s) 403, 880, 972, 979, 1063
BstMAI GTCTC 6 cut(s) 18, 76, 397, 564, 616, 848
BstMBI GATC 5 cut(s) 400, 877, 969, 976, 1060
BstMCI CGRYCG 1 cut(s) 316
BstMWI GCNNNNNNNGC 1 cut(s) 385
BstNI CCWGG 3 cut(s) 659, 983, 1126
BstSCI CCNGG 4 cut(s) 297, 657, 981, 1124
BstSFI CTRYAG 2 cut(s) 45, 1143
BstSLI GKGCMC 1 cut(s) 989
BstUI CGCG 4 cut(s) 405, 455, 465, 719
BstV1I GCAGC 2 cut(s) 30, 1129
BstV2I GAAGAC 1 cut(s) 1067
BstX2I RGATCY 1 cut(s) 969
BstYI RGATCY 1 cut(s) 969
BsuI GTATCC 1 cut(s) 919
BsuRI GGCC 7 cut(s) 158, 221, 285, 704, 987, 1124, 1226
BtgI CCRYGG 3 cut(s) 235, 327, 750
BtgZI GCGATG 1 cut(s) 325
BtsCI GGATG 2 cut(s) 781, 910
BtsI GCAGTG 1 cut(s) 1170
BtsIMutI CAGTG 4 cut(s) 42, 66, 1035, 1170
BtuMI TCGCGA 1 cut(s) 405
Cac8I GCNNGC 6 cut(s) 269, 283, 304, 386, 447, 1122
CciI TCATGA 1 cut(s) 874
CfoI GCGC 3 cut(s) 273, 413, 465
Cfr10I RCCGGY 1 cut(s) 281
Cfr13I GGNCC 4 cut(s) 220, 284, 985, 986
Csp6I GTAC 2 cut(s) 478, 483
CviAII CATG 7 cut(s) 167, 193, 236, 328, 475, 751, 875
CviQI GTAC 2 cut(s) 478, 483
DdeI CTNAG 5 cut(s) 8, 99, 546, 858, 1068
DpnI GATC 5 cut(s) 402, 879, 971, 978, 1062
DpnII GATC 5 cut(s) 400, 877, 969, 976, 1060
DraI TTTAAA 1 cut(s) 838
EaeI YGGCCR 3 cut(s) 156, 1122, 1224
Eam1104I CTCTTC 1 cut(s) 861
EarI CTCTTC 1 cut(s) 861
Ecl136II GAGCTC 1 cut(s) 388
Eco130I CCWWGG 3 cut(s) 235, 327, 750
Eco147I AGGCCT 1 cut(s) 704
Eco24I GRGCYC 2 cut(s) 390, 989
Eco31I GGTCTC 1 cut(s) 564
Eco53kI GAGCTC 1 cut(s) 388
Eco57I CTGAAG 1 cut(s) 683
EcoICRI GAGCTC 1 cut(s) 388
EcoO109I RGGNCCY 1 cut(s) 985
EcoRII CCWGG 3 cut(s) 657, 981, 1124
EcoT14I CCWWGG 3 cut(s) 235, 327, 750
EcoT38I GRGCYC 2 cut(s) 390, 989
ErhI CCWWGG 3 cut(s) 235, 327, 750
Esp3I CGTCTC 3 cut(s) 18, 397, 616
FaeI CATG 7 cut(s) 170, 196, 239, 331, 478, 754, 878
FaqI GGGAC 1 cut(s) 556
FatI CATG 7 cut(s) 166, 192, 235, 327, 474, 750, 874
FauI CCCGC 2 cut(s) 371, 384
FblI GTMKAC 1 cut(s) 249
Fnu4HI GCNGC 2 cut(s) 19, 1143
FokI GGATG 2 cut(s) 788, 917
FriOI GRGCYC 2 cut(s) 390, 989
Fsp4HI GCNGC 2 cut(s) 19, 1143
FspBI CTAG 1 cut(s) 930
GlaI GCGC 3 cut(s) 272, 412, 464
GluI GCNGC 2 cut(s) 19, 1143
HaeIII GGCC 7 cut(s) 158, 221, 285, 704, 987, 1124, 1226
HapII CCGG 2 cut(s) 282, 299
HhaI GCGC 3 cut(s) 273, 413, 465
Hin1II CATG 7 cut(s) 170, 196, 239, 331, 478, 754, 878
Hin6I GCGC 3 cut(s) 271, 411, 463
HinP1I GCGC 3 cut(s) 271, 411, 463
HincII GTYRAC 1 cut(s) 436
HindII GTYRAC 1 cut(s) 436
HinfI GANTC 7 cut(s) 39, 108, 183, 471, 1072, 1181, 1217
HpaII CCGG 2 cut(s) 282, 299
Hpy166II GTNNAC 3 cut(s) 250, 436, 940
Hpy188I TCNGA 8 cut(s) 11, 107, 493, 569, 709, 810, 1047, 1099
Hpy188III TCNNGA 8 cut(s) 32, 118, 180, 404, 853, 875, 1058, 1236
Hpy8I GTNNAC 3 cut(s) 250, 436, 940
Hpy99I CGWCG 2 cut(s) 266, 281
HpyAV CCTTC 8 cut(s) 301, 430, 727, 836, 895, 916, 1033, 1190
HpyCH4III ACNGT 8 cut(s) 29, 46, 70, 277, 482, 487, 652, 1019
HpyCH4IV ACGT 3 cut(s) 432, 1034, 1137
HpyCH4V TGCA 3 cut(s) 605, 793, 1145
HpyF10VI GCNNNNNNNGC 1 cut(s) 385
HpyF3I CTNAG 5 cut(s) 8, 99, 546, 858, 1068
HpySE526I ACGT 3 cut(s) 432, 1034, 1137
Hsp92II CATG 7 cut(s) 170, 196, 239, 331, 478, 754, 878
HspAI GCGC 3 cut(s) 271, 411, 463
KroI GCCGGC 1 cut(s) 281
KroNI GCCGGC 1 cut(s) 283
Kzo9I GATC 5 cut(s) 400, 877, 969, 976, 1060
LmnI GCTCC 2 cut(s) 108, 245
Lsp1109I GCAGC 2 cut(s) 30, 1129
LweI GCATC 1 cut(s) 1101
MaeI CTAG 1 cut(s) 930
MaeII ACGT 3 cut(s) 432, 1034, 1137
MaeIII GTNAC 6 cut(s) 40, 358, 742, 1019, 1030, 1182
MalI GATC 5 cut(s) 402, 879, 971, 978, 1062
MboI GATC 5 cut(s) 400, 877, 969, 976, 1060
MboII GAAGA 5 cut(s) 689, 878, 910, 964, 1067
MflI RGATCY 1 cut(s) 969
MhlI GDGCHC 2 cut(s) 390, 989
MlsI TGGCCA 3 cut(s) 158, 1124, 1226
MluCI AATT 3 cut(s) 553, 758, 1092
MluNI TGGCCA 3 cut(s) 158, 1124, 1226
MlyI GAGTC 4 cut(s) 48, 1081, 1190, 1226
MmeI TCCRAC 1 cut(s) 471
Mox20I TGGCCA 3 cut(s) 158, 1124, 1226
MroNI GCCGGC 1 cut(s) 281
MscI TGGCCA 3 cut(s) 158, 1124, 1226
MseI TTAA 3 cut(s) 756, 837, 1211
MslI CAYNNNNRTG 2 cut(s) 191, 1028
Msp20I TGGCCA 3 cut(s) 158, 1124, 1226
MspI CCGG 2 cut(s) 282, 299
MspR9I CCNGG 4 cut(s) 299, 659, 983, 1126
MvaI CCWGG 3 cut(s) 659, 983, 1126
MvnI CGCG 4 cut(s) 405, 455, 465, 719
MwoI GCNNNNNNNGC 1 cut(s) 385
NaeI GCCGGC 1 cut(s) 283
NciI CCSGG 1 cut(s) 299
NcoI CCATGG 3 cut(s) 235, 327, 750
NdeII GATC 5 cut(s) 400, 877, 969, 976, 1060
NgoMIV GCCGGC 1 cut(s) 281
NlaIII CATG 7 cut(s) 170, 196, 239, 331, 478, 754, 878
NlaIV GGNNCC 3 cut(s) 241, 286, 987
NmeAIII GCCGAG 1 cut(s) 197
NmuCI GTSAC 5 cut(s) 40, 358, 742, 1030, 1182
NruI TCGCGA 1 cut(s) 405
OliI CACNNNNGTG 1 cut(s) 1028
PagI TCATGA 1 cut(s) 874
PceI AGGCCT 1 cut(s) 704
PdiI GCCGGC 1 cut(s) 283
PfeI GAWTC 3 cut(s) 108, 183, 471
PkrI GCNGC 2 cut(s) 20, 1144
PleI GAGTC 4 cut(s) 47, 1080, 1189, 1225
PpsI GAGTC 4 cut(s) 47, 1080, 1189, 1225
PshBI ATTAAT 1 cut(s) 1211
Psp124BI GAGCTC 1 cut(s) 390
Psp6I CCWGG 3 cut(s) 657, 981, 1124
PspGI CCWGG 3 cut(s) 657, 981, 1124
PspN4I GGNNCC 3 cut(s) 241, 286, 987
PspOMI GGGCCC 1 cut(s) 985
PspPI GGNCC 4 cut(s) 220, 284, 985, 986
PstI CTGCAG 1 cut(s) 1147
PsuI RGATCY 1 cut(s) 969
RruI TCGCGA 1 cut(s) 405
RsaI GTAC 2 cut(s) 479, 484
RsaNI GTAC 2 cut(s) 478, 483
RseI CAYNNNNRTG 2 cut(s) 191, 1028
SacI GAGCTC 1 cut(s) 390
SaqAI TTAA 3 cut(s) 756, 837, 1211
SatI GCNGC 2 cut(s) 19, 1143
Sau3AI GATC 5 cut(s) 400, 877, 969, 976, 1060
Sau96I GGNCC 4 cut(s) 220, 284, 985, 986
SchI GAGTC 4 cut(s) 48, 1081, 1190, 1226
ScrFI CCNGG 4 cut(s) 299, 659, 983, 1126
SduI GDGCHC 2 cut(s) 390, 989
SfaNI GCATC 1 cut(s) 1101
SfcI CTRYAG 2 cut(s) 45, 1143
SmiMI CAYNNNNRTG 2 cut(s) 191, 1028
Sse9I AATT 3 cut(s) 553, 758, 1092
SseBI AGGCCT 1 cut(s) 704
SsiI CCGC 6 cut(s) 364, 377, 455, 465, 719, 780
SspMI CTAG 1 cut(s) 930
SstI GAGCTC 1 cut(s) 390
StuI AGGCCT 1 cut(s) 704
StyD4I CCNGG 4 cut(s) 297, 657, 981, 1124
StyI CCWWGG 3 cut(s) 235, 327, 750
TaaI ACNGT 8 cut(s) 29, 46, 70, 277, 482, 487, 652, 1019
TaiI ACGT 3 cut(s) 435, 1037, 1140
TaqI TCGA 4 cut(s) 683, 852, 975, 1215
TaqII GACCGA 1 cut(s) 302
TasI AATT 3 cut(s) 553, 758, 1092
TfiI GAWTC 3 cut(s) 108, 183, 471
Tru1I TTAA 3 cut(s) 756, 837, 1211
Tru9I TTAA 3 cut(s) 756, 837, 1211
TscAI CASTG 4 cut(s) 49, 73, 1035, 1170
TseFI GTSAC 5 cut(s) 40, 358, 742, 1030, 1182
TseI GCWGC 2 cut(s) 18, 1142
Tsp45I GTSAC 5 cut(s) 40, 358, 742, 1030, 1182
TspDTI ATGAA 6 cut(s) 368, 463, 508, 911, 984, 1094
TspRI CASTG 4 cut(s) 49, 73, 1035, 1170
VspI ATTAAT 1 cut(s) 1211
XapI RAATTY 2 cut(s) 553, 1092
XcmI CCANNNNNNNNNTGG 1 cut(s) 757
XmiI GTMKAC 1 cut(s) 249
XspI CTAG 1 cut(s) 930
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.